Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A10 F2 I0 R1
|
233 |
6461.8 |
9239822 |
98.3% |
9082745 |
135.7 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
freq |
annotation |
gene |
description |
| RA |
NZ_CP022686 |
1,479,607 |
A→C |
11.9% |
intergenic (‑16/+177) |
ftsB ← / ← ygbE |
cell division protein FtsB/DUF3561 family protein |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NZ_CP022686 | 1,479,607 | 0 | A | C | 11.9%
| 484.7
/ 14.3
| 240 | intergenic (‑16/+177) | ftsB/ygbE | cell division protein FtsB/DUF3561 family protein |
| Reads supporting (aligned to +/- strand): ref base A (146/55); new base C (3/32); total (150/90) |
| Fisher's exact test for biased strand distribution p-value = 4.60e-13 |
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 |
Only 100 of 244 total aligned reads displayed.
CTTGCTGTGCCGCCACATCATTATTGACGCGAGTATAGTCATGTATACCGTTCTTACCGAACCACAGCGAATACTGTAGCCAGACCAGAATAGCCAGCAACAGCAGCGTTAGTTTACCCATCCTGCCCCCTGAAAAACGGCATCTTCATCCCATGCATCCGAAGACGACTCTACATCCTCTGTTGGGGATACCGCGACAACGCGGGCAAATGTACCACATTTGTCGATTGTTACGTATACCCAGGGCGTGCAGAACATAATCTCATTATTAGT > NZ_CP022686/1479471‑1479743
|
cTTGCTGTGTCGCCACATCATTATTGACGCGAGTTTAGTCATGTATACCGTTCTTACCGAAGCACAGCGAATACTGTAGCCAGTCCAGATTAGCCAGCTACAGCAGCGTTAGTTTACCCATCCTGCCCCCTTAAAAAc < 6:383998/138‑1 (MQ=255)
ttGCTGTGCCGCCACATCATTATTGACGCGAGTATAGTCATGTATACCGTTCTTACCGAACCACAGCGAATACTGTAGCCAGACCAGAATAGCCAGCAACAGCAGCGTTAGTTTACCCATCCTGCCCCCTGAAAAACGGc < 2:350937/140‑1 (MQ=255)
tGCTGTGCAGCCACATCATTATTGACGCGAGTATAGTCATGTATACCGTTCTTACCGAACCACAGCGAATACTGTAGCCAGACCAGAATAGCCAGCAACAGCAGCGTTAGTTTACCCATCCTGCCCCCTGAAAAACGGCa > 2:892777/1‑140 (MQ=255)
cTGTGCCGCCACATCATTATTGACGCGAGTATAGTCATGTATACCGTTCTTACCGAACCACAGCGAATACTGTAGCCAGACCAGAATAGCCAGCAACAGCAGCGTTAGTTTACCCATCCTGCCCCCTGAAAAACGGCa > 5:1110044/1‑138 (MQ=255)
cTGTGCCGCCACATCATTATTGACGCGAGTATAGTCATGTATACCGTTCTTACCGAACCACAGCGAATACTGTAGCCAGACCAGAATAGCCAGCAACAGCAGCGTTAGTTTACCCATCCTGCCCCCTGAAAAACGGCATc > 7:398097/1‑140 (MQ=255)
tgtgCCGCCACATCATTATTGTCGCGAGTATAGTCATGTATACCGGTCTTACCGAACCACAGCGAATACTGTAGCCAGACCAGAATACCCAGCAACAGCAGCGTTAGTTTACCCATCCTGCCCCCTGAAAAACGGCATCt < 8:1079508/140‑1 (MQ=255)
tgCCGCCACATCATTATTGACGCGAGTATAGTCATGTATACCGTTCTTACCGAACCACAGCGAATACTGTAGCCAGACCAGAATAGCCAGCAACAGCAGCGTTAGTTTACACATCCTGCCCCCTGAAAAACGGCATCTTc > 4:613800/1‑140 (MQ=255)
ccgccACATCATTATTGACGCGAGTATAGTCATGTATCCCGTTCTGACCGAACCACAGCGAATACTGTAGCCAGACCAGAATAGCCAGCAACAGCAGCGTTAGTTTCCCCATCCTGCCCCCTGAAAAACGGCATCTTCAt > 1:743816/1‑140 (MQ=255)
tattGACGCGAGTATAGTCATGTATACCGTTCTTACCGAACCACAGCGAATACTGTAGCCAGACCAGAATAGCCAGCAACAGCAGCGTTAGTTTACCCATCCTGCCCCCTGAAAAACGGCATCTTCATCCCATGCATc > 6:601410/1‑138 (MQ=255)
tGACGCGAGTATAGTCATGTATACCGTTCTTACCGAACCACAGCGAATAATGTAGCCAGACAAGAATAGCCAGCAACAGCAGCGTTAGTTTACACATCCTGCCCCCTGAAAACCGGCATCTTCATCCCATGCATCCGa > 6:97236/1‑138 (MQ=255)
aCGCGAGTATAGTCATGTATACCGTTCTTACCGAACCACAGCGAATACTGTAGCCAGACCAGAATAGCCAGCAACAGCAGCGTTAGTTTACCCATCCTGCCCCCTGAAAAACGGCATCTTCATCCCATGCATCCGAAgac > 8:655521/1‑140 (MQ=255)
tataGTCATGTATACCGTTCTTACCGAACCACAGCGAATACTGTAGCCAGACCAGAATAGCCAGCAACAGCAGCGTTAGTTTACCCATCCTGCCCCCTGAAAAACGGCATCTTCATCCCATGCATCCGAAGACGCctc > 5:643433/1‑138 (MQ=255)
ataCTCATTTATACCGTTCTACCCGACCCCCAGCCAATACTGTAGCCAGACCACAATCGCCAGACACAGCAGCGTTAGTTTACCCATCCTGCCCCCTTAAAAACGTCTTTTTAATCCCATGCATCCGACGACGACTATAc < 4:56154/140‑1 (MQ=255)
tCATGTATACCGTTCTTACCGAACCACAGCGAATACTGTAGCCAGCCCAGAATAGCCAGCAACAGCAGCGTTAGTTTACCCATCCTGCCCCCTGAAAAACGGCATCTTCATCCCATGCATCCGAAGACGACTCTACATcc > 7:717691/1‑140 (MQ=255)
tGTATACCGTTCTTACCGAACCACAGCGAATACTGTAGCCAGACCAGAATAGCCAGCAACAGCAGCGTTAGTTTACCCATCCTGCTCCCTGAAAAACGGCATCTTCATCCCATGCATCCGAAGACGACTCTACATCctct > 1:231934/1‑140 (MQ=255)
tataCCGTTCTTACCGAACCACAGCGAATACTGTAGCCAGACCAGAATAGCCAGCAACAGCAGCGTTAGTTTACCCATCCTGCCCCCTGAAAAACGGCATCTTCATCCCATGCATCCGAAGACGACTCTACATCCTCTGt > 7:1081479/1‑140 (MQ=255)
tataCCGTTCTTACCGAACCACAGCGAATACTGTAGCCAGACCAGAATAGCCAGCAACAGCAGCGTTAGTTTACCCATCCTGCCCCCTGAAAAACGGCATCTTCATCCCATGCATCCGAAGACGACTCTACATCCTCTGt > 3:527869/1‑140 (MQ=255)
tataCCGTTCTTACCGAACCACAGCGAATACTGTAGCCAGACCAGAATAGCCAGCAACAGCAGCGTTAGTTTACCCATCCTGCCCCCTGAAAAACGGCATCTTCATCCCATGCATCCGAAGACGACTCTACATCCTCTGt > 4:18292/1‑140 (MQ=255)
ataCCGTTCTTACCGAACCACAGCGAATACTGTAGCCAGACCAGAATAGCCAGCAACAGCAGCGTTAGTTTACCCATCCTGCCCCCTGAAAAACGGCATCTTCATCCCATGCATCCGAAGACGACTCTACATCCTCTg > 6:532393/1‑138 (MQ=255)
taCCGTTCTTACCGAACCACAGCGAATACTGTAGCCAGACCAGAATAGCCAGCAACAGCAGCGTTAGTTTACCCATCCTGCCCCCTGAAAAACGGCATCTTCAGCCCATGCATCCGAAGACGCCTCTACATCCTCTgg > 6:1062303/1‑137 (MQ=255)
cGTTCTTACCGAACCACAGCGAATACTGTAGCCAGACCAGAATAGCCAGCAACAGCAGCGTTAGTTTACCCATCCTGCCCCCTGACAAACGGCATCTTCATCCCATGCATCCGAAGACGACTCTACATCATCTGTTgggg > 8:134668/1‑140 (MQ=255)
cGTTCTTACCGAACCACAGCGAATACTGTAGCCAGACCAGAATAGCCAGCAACAGCAGCGTTAGTTTACCCATCCTGCCCCCTGAAAAACGGCATCTTCATCCCCTGCATCCGAAGACGACTCTACATCCTATGTTgggg > 1:980810/1‑140 (MQ=255)
cGTTCTTACCGAACCACAGCGAATACTGTAGCCAGACCAGAATAGCCAGCAACAGCAGCGTTAGTTTACCCATCCTGCCCCCTGAAAAACGGCATCTTCATCCCATGCATCCGAAGACGACTCTACATCCTCTTTTgggg > 4:249960/1‑140 (MQ=255)
cGTTCTTACCGAACCACAGCGAATACTGTAGCCAGACCAGAATAGCCAGCAACAGCAGCGTTAGTTTACCCATCCTGCCCCCTGAAAAACGGCATCTTCATCCCATGCATCCGAAGACGACTCTACATCCTCTGTTgggg > 4:425939/1‑140 (MQ=255)
cGTTCTTACCGAACCACAGCGAATACTGTAGCCAGACCAGAATAGCCAGCAACAGCAGCGTTAGTTTACCCATCCTGCCCCCTGAAAAACGGCATCTTCATCCCATGCATCCGAAGACGACTCTACATCCTCTGTTgggg > 2:402226/1‑140 (MQ=255)
ttCTTACCGAACCACAGCGACTACTGTAGCCAGACCAGACGAGCCAGCAACAGCAGCGTTAGTGTACACATCCTGCCCCCTGAATACCGGCATGAGCATCCCATGCCTCCGAAGACGACTCTACATGCTCGGGTgggg > 6:814418/1‑138 (MQ=255)
ttCTTACCGAACCACAGCGAATACTGTAGCCAGACCAGAATAGCCAGCAACAGCAGCGTTAGTTTACCCATCCTGCCCCCTGAAAAACGGCATCTTCATCCCATGTATCCGAAGACGACTCTACATCCTCTGTTGGGCAt > 7:904642/1‑140 (MQ=255)
ttCTTACCGAACCACAGCGAATACTGTAGCCAGACCAGAATAGCCAGCAACAGCAGCGTTAGTTTACCCATCCTGCCCCCTGAAAAACGGCATCTTCATCCCATGCATCCGAAGACGCCTCTACATCCTCTGTTGGGGAt > 3:375909/1‑140 (MQ=255)
ttCTTACCGAACCACAGCGAATACTGTAGCCAGACCAGAATAGCCAGCAACAGCAGCGTTAGTTTACCCATCCTGCCCCCTGAAAAACGGCATCTTCATCCCATGCATCCGAAGACGACTCTACATCCTCTGTTGGGGAt > 3:1088150/1‑140 (MQ=255)
ttCTTACCGAACCACAGCGAATACTGTAGCCAGACCAGAATAGCCAGCAACAGCAGCGTTAGTTTACCCATCCTGCCCCCTGAAAAACGGCATCTTCATCCCATGCATCCGAAGACGACTCTACATCCTCTGTTGGGGAt > 4:803616/1‑140 (MQ=255)
ttCTTACCGAACCACAGCGAATACTGTAGCCAGACCAGAATAGCCAGCAACAGCAGCGTTAGTTTACCCATCCTGCCCCCTGAAAAACGGCATCTTCATCCCATGCATCCGAAGACGACTCTACATCCGCTGTTGGGGAt > 3:26103/1‑140 (MQ=255)
ttCTTAACGAACCACAGCGAATACTGTAGCAATACCATAATACCCATCAACAGCAGCGTTAGTTTACCAATCCTGCCCACTGAAAAACGGCATCTTCATCCCATGCATCAGAAGACGACTCTACATCCTCTGTTGGGGAt > 2:267634/1‑140 (MQ=255)
cTTACCGAACCACAGCGAATACTGTAGCCAGACCAGAATAGCCAGCAACAGCAGCGTTAGTTTACCCATCCTGCCCCCTGAAAAACGGCATCTTCATCCCATGCATCCGAAGACGACTCTACATCCTCTGTTGGGGAt > 5:1073273/1‑138 (MQ=255)
aCCGAACCACAGCGAATACTGTAGCCAGACCAGAATAGCCAGCAACAGCAGCGTTAGTTTACCCATCCTGCCCCCTGAAAAACGGCATCTTCATCCCATGCATCCGAAGACGACTCTACATCCTCTGTTGGGGATACcgc > 8:290584/1‑140 (MQ=255)
aCCACAGCGAATACTGTAGCCATACCAGAATAGCCAGCAACAGCAGCGTTAGTTTACCCATCCTGCCCCCTGAAAAACGGCATCTTCATCCCATGCATCCGAAGACGACTCTACATCCTCTGTTGGGGATACCGCGACaa > 3:943235/1‑140 (MQ=255)
ccACAGCGAATACTGTAGCCAGACCAGAATAGCCAGCAACAGCAGCGTTAGTTTACCCATCCTGCCCCCTGAAAAACGGCATCTTCATCCCATGCATCCGAAGACGACTCTACATCCTCTGTTGGGGATACCGCGACAAc > 4:903949/1‑140 (MQ=255)
aGCGAATACTGTAGCCAGACCAGAATAGCCAGCAACAGCAGCGTTAGTTTACCCATCCTGCCCCCTGAAAAACGGCATCTTCATCCCATGAAACCGAAGACGACTCTACATCCTCTGTTGGGGAAACAGCGACAACGCgg > 2:492447/1‑140 (MQ=255)
ctaaTACTGTCGCCCCCCCAGAATCCCCCGCAACACCAGCTTTAGTTTCCCCATCCTCCCCCCTCAAAACCGGCATCTTCAACCCATGCAGCCCAACACGACTCTACATCCTCTGTTGGGGATACCGCGACAACGCGGGc < 7:465551/138‑1 (MQ=255)
ctaaTACTGTCGCCAGACCATAATAGCCACCACCAGCAGCTTTAGTTAACCCATCCTGCCCCCTGAAAACCGGCATCTTCAACCCATGCAGCCGACGACGACTCTACATCCTCTGTTGGGGATACCGCGACAACGCGGGc < 8:1013929/138‑1 (MQ=255)
aaTACTGTAGCCAGACCAGAATAGCCAGCAACAGCAGCGTTAGTTTACCCATCCTGCCCCCTGAAAAACGGCATCTTCATCCCATGCATCCGAAGACGACTCTACATCCTCTGTTGGGGATACCGCGACAACGCGGGCaa > 7:35538/1‑140 (MQ=255)
tACTGTAGCCAGACCAGAATAGCCAGCAACAGCAGCGTTAGTTTACCCATCCTGCCCCCTGAAAAACGGCATCTTCATCCCATGCATCCGAAGACGACTCTACATCCTCTGTTGGGGATACCGCGACAACGCGGGCaa > 6:722638/1‑138 (MQ=255)
gtcgCCCGACCAGAATAGCCAGCAACCTCAGCGTTCGTTTACCCATCGTGCCCCCTCAAAAACGGCATCTTAACCCCATCCATCCGACCACGACTCTACATCCTCTGTTGGGGATACCGCGACAACGCGGGCAAATGTAc < 4:854623/137‑1 (MQ=255)
gTAGCCAGACCAGAATAGCCAGCAACAGCAGCGTTAGTTTACCCATCCTGCCCCCTGAAAAACGGCATCTTCATCCCATGCATCCGAAGACGACTCTACATCCTCTGTTGGGGATACCGCGACAACGCGGGCAAATGTAc > 2:1160247/1‑140 (MQ=255)
gTAGCCAGACCAGAATAGCCAGCAACAGCAGCGTTAGTTTACCCATCCTGCCCCCTGAAAAACGGCATCTTCATCCCATGCATCCGAAGACGACTCTACATCCTCTGTTGGGGATACCGCGACAACGCGGGCAAATGTAc > 1:214238/1‑140 (MQ=255)
gTAGCCAGACCAGAATAGCCAGCAACAGCAGCGTTAGTTTACCCATCCTGCCCCCTGAAAAACGGCATCTTCATACCATGCATCCGAAGACGACTCTACATCCTCTGTTGGGGATACCGCGACAACGCGGGCAAATGTaa > 4:958512/1‑139 (MQ=255)
tAGCCAGACCAGAATAGCCAGCAACAGCAGCGTTAGTTTACCCATCCTGCCCCCTGAAAAACGGc > 7:826318/1‑65 (MQ=255)
tAGCCAGACCAGAATAGCCAGCAACAGCAGCGTTAGTTTACCCATCCTGCCCCCTGAAAAACGGc < 8:826318/65‑1 (MQ=255)
accagaATAGCCAGCAACAGCAGCGTTAGTTTACCCATCCTGCCCCCTGAAAAACGGCATCTTCATCCCa > 1:1039844/1‑70 (MQ=255)
accagaATAGCCAGCAACAGCAGCGTTAGTTTACCCATCCTGCCCCCTGAAAAACGGCATCTTCATCCCATGCATCCGAAGACGACTCTACAACCTCTGTTGTCGATACAGCGCAAACGCGTGCAAATGTACAACATTTg > 4:1000978/1‑140 (MQ=255)
cagaATAGCCAGCAACAGCAGCGTTAGTTTACCCATACTGCCCCCTGAAAAACGGCATCTTCATCCCATGCATCCGAAGACGACTCTACATCCTCTGGTGGGGATACCGCGACAACGCGTGCAAATGTGCCACAtttt > 5:591792/1‑137 (MQ=255)
aacaaTAGCCCCCAACACCTGCGTTATTTAACCCATCCTGCCCCTTTAAAATCGGAATCTTCATCCCATGCATCCGAAGACGACTCTACATCCTCTGTTGGGGATACCGCGACAACGCGGGCAAATGTACCACATTTGTc < 4:327746/137‑1 (MQ=255)
taaTAGCCACAAACAGCAGCGTTCGTTTCCCCATCCTCCCCCATCAAAACCGGCATCTCCATCCAACGCCCCCGAAGACGACTCTACATCCTCTGTTGGGGATACCGCGACAACGCGGGCAAATGTACCACATTTGTc < 6:256640/137‑1 (MQ=255)
aaTAGCCAGCAACAGCAGCGTTAGTTTACCCATCCTGCCCCCTGAAAAACGGCATc > 4:1057382/1‑56 (MQ=255)
aaTAGCCAGCAACAGCAGCGTTAGTTTACCCATCCTGCCCCCTGAAAAACGGCATCTTCATCCCATGCATCCGAAGACGACTCTACATCCTCTGTTGGGGATACCGCGACAACGCGGGCAAATGTACCACATTTGTCGAt > 1:755023/1‑140 (MQ=255)
aaTAGCCAGCAACAGCAGCGTTAGTTTACCCATCCTGCCCCCTGAAAAACGGCATCTTCATCCCATGCATCCGAAGACGACTCTACATCCTCTGTTGGGGATACCGCGACAACGCGGGCAAATGTACCACATTTGTCGAt > 1:612091/1‑140 (MQ=255)
aaTAGCCAGCAAAAGCAGCGTTAGTTTACCCATCCTGCCCCCTGAAAAACGGCATCTTCATCCCATGCATCCGAAGACGACTCTACATCCTCTGTTGGGGATACCGCGACAACGCGGGCAAATGTACCACATTTTTCGAt > 3:597674/1‑140 (MQ=255)
atcgCCACCAACCGCAGCGTTCGTTTCCCCATCCTGCCCCTTTAAAACCGGAATCTTACACCCATGCATCCGACGACGACTCTACATCCTCTGTTGGGGATACCGCGACAACGCGGGCAAATGTACCACATTTGTCGAtt < 3:561535/137‑1 (MQ=255)
cgCCACCAACAGCAGCTTTAGTTAACCAATCCTGCCCCCTTAAAACCGGCATCTTCATCCCATGCATCCTACCACGACTCTACATCCTCTGTTGGGGATACCGCGACAACGCGGGCAAATGTACCACATTTGTCGATTGt < 4:527869/139‑1 (MQ=255)
ccccaccaACCGCCGCGTTAGTATCCCCACCCTGCCCCCTAAAAACCGGCATATTCACCCCATCAACCCGAAGACGACTCTACATCCTCTGTTGGGGATACCGCGACAACGCGGGCAAATGTACCACATTTGTCGAtt < 5:26217/136‑1 (MQ=255)
ccccAGCAACCCCAGCGTTAGTTTCCCCATCCTGCCCCCTTAAACACGGCATATACAGCCACTGCATCCGAAGACGACTCTACATCCTCTGTTGGGGATACCGCGACAACGCGGGCAAATGTACCACATTTGTCGAtt < 5:48525/136‑1 (MQ=255)
acccaccaACAGCAGCGTTAGTTTCCCCATCCTGCCCCCTTAAAAACGGAATCTTCATCCCCTGCATCCGACGACGACTCTACATCCTCTGTTGGGGATACCGCGACAACGCGGGCAAATGTACCACATTTGTCGATTGt < 4:153960/138‑1 (MQ=255)
aGCCAGCACCACCAGGTTTAGATTACCCACCCTGCCCCCTGAAAACGGGCATCTAATTCCCATGCACCCGAAGACGACTCTACATCCTCTGTTGGGGATACCGCGACAACGCGGGCAAATGTACCACATTTGTCGATTGt < 4:763052/140‑1 (MQ=255)
aGCCACCAACACCAGCGTTTGTTTACACATCCTGCCCCATTAAAACCGCCATCTACATCCAATGCACCCGAAGACGACTCTACATCCTCTGTTGGGGATACCGCGACAACGCGGGCAAATGTACCACATTTGTCGAtt < 6:213480/138‑1 (MQ=255)
ccAGCAACAGCAGCGTTAGTTTACCCATCCTGCCCCCTGAAAAACGGCATCTTCATCCCATGCATCCGAAGACGACTCTACATCCTCTGTTGGGGATACCGCGACACCGCGGGCAAATGTACCACATTTGTCGATTGtga > 8:935439/1‑138 (MQ=255)
ccAGCAACAGCAGCGTTAGTTTACCCATCCTGCCACCTGAAAAACGGCATCTTCATCCCATGCATCCGAAGACGACTCTACATCCTCTGGTGGGGATACCGCGACAACGCGGGCAAATGTACCACATTTGTCGATTGTTa > 1:1161544/1‑140 (MQ=255)
cgaaaCAGCAGCGTTTGTTTACCCATCCTGCCCCCTTAAAAACGGCATCTTCATCCCATGCATCCGACGACGACTCTACATCCTCTGTTGGGGATACCGCGACAACGCGGGCAAATGTACCACATTTGTCGATTGTTACg < 4:389085/137‑1 (MQ=255)
cgCACCAGCAGATTTTGTTTACCCAACCTGCACCATGAAATACCCAATTTTCAACCCATGCATCCTAAGACGACTCTACATCCTCTGTTTGGGATACCGCGACAACGCGGGCAAATGTACCACATTTGTCGATTGTTACg < 8:636540/139‑1 (MQ=255)
acaaaCACCAGCGTTAGTTTCCCCACCCTCCCCCGTGAAAACCGGCATATTAATCCCATGCCCCCTACCACGACTCTACATCCTCTGTTGGGGATACCGCGACAACGCGGGCAAATGTACCACATTTGTCGATTGTTa < 5:398018/135‑1 (MQ=255)
aGCAACTGCTGCGTTTTTTTACCCAACCTGCCCCATGAAAACCGGCATCTTCATCCCATGCATCCGACGACGACTCTACATCCTCTGTTGGGGATACCGCGACAACGCGGGCAAATGTACCACATTTGTCGATTGTTACg < 7:655521/140‑1 (MQ=255)
caaaCAGCAGCTTTTGTATACCCATACACCCCCTTTAAAAACGGCATCTACAACCCATTCTCCCTAAGACGACTCTACATCCTATGTTGGGGATACCGCGACAACGCGGGCAAATGTACCACATTTGTCGATTGTTACGt < 3:509367/138‑1 (MQ=255)
cAACAGCCGCGTTTGTTTACCCATCCTGCCCCCTGAAAACCGGCAGCTTCACCCCAGCCATCGGACGACGACTCTACATCCTCTGTTGGGGATACCGCGACAACGCGGGCAAATGTACCACATTTGTCGATTGTTACGta < 4:663926/140‑1 (MQ=255)
cAACAGCAGCGTTAGTTTACCCATCCTGCCCCCTGAAAAACGGCATCTTCATCCCATGCATCCGAAGACGACTCTACATCCTCTGTTGGGGATACCGCGACAACGCGGGCAAATGTACCACATTTGTCGATTGTTACg > 5:233331/1‑138 (MQ=255)
cAACAGAAGCGTTAGTTTACCCATCCTGCCCCCTGAAAAACGGCATCTTCATCAAATGCATCCGAAGACGACTCTACAACCTCTGTTGGGGATACCGCGACAACGCGGGCAAATGTACCACATTTGTCGATTGTTACGta > 1:953677/1‑140 (MQ=255)
aaCAGCAGCGTTAGTTTACCCATCCTGCCCCCTGAAAAACGGCATCTTCATCCCATGCATCCGAAGACGACTCTACATCCTCTGTTGGGGATACCGCGACAACGCGGGCAAATGTACCACATTTGTCGATTGTTACGtat > 4:11860/1‑140 (MQ=255)
ccagcTTTAGTTAACCCATCCTGCCCCCTTAAAAACGCCATCTTCATCCCATGCACCCGACCACGACTCTACATCCTCTGTTGGGGATACCGCGACAACGCGGGCAAATGTACCACATTTGTCGATTGTTACGTATAccc < 1:1059208/139‑1 (MQ=255)
cagcGTTAGTTTACCCATCCTGCCCCCTGAAAAACGGCATCTTCATCCCATGCATCCGAAGACGACTCTACATCCTCTGTTGGGGATACCGCGACAACGCGGGCAAATGTACCACATTTGTCGATTGTTACGTATACCCa > 3:742375/1‑140 (MQ=255)
gcGTTAGTTTACCCATCCTGCCCCCTGAAAAACGGCATCTTCATCCCATGCATCCGAAGACGACTCTACATCCTCTGTTGGGGATACAGCGACAACGCGGGCAAATGTACCACATTTGTCGATTGTTACGTATACCCa > 5:769844/1‑138 (MQ=255)
ccggtAGTTAACCCACCCTCCCCCATGAAAACCGCCATATTAATCACATGCATCCTCAGACGACTCTACATCCTCTGTTGGGGATACCGCGACAACGCGGGCAAATGTACCACATTTGTCGATTGTTACGTATACCCTgg < 2:647967/136‑1 (MQ=255)
gTTAGTTTACCCATCCTCCCCCCTTAAAAACGGAATATTCATCCCATGCAACCGAACACGACTCTACATCCTCTGTTGGGGATACCGCGACAACGCGGGCAAATGTACCACATTTGTCGATTGTTACGTATACCCAGGGc < 3:893687/140‑1 (MQ=255)
ttAGTTTACCCATCCTGCCCCCTGTAAAACGGCATCTTCATCCCATGCATCCGAAGACGACTCTACATCCTCTGTTGGGGATACCGCGACAACGCGGGCAAATGTACCACATTTGTCGATTGTTACGTATACCCAGGGCg > 3:67301/1‑140 (MQ=255)
aGTTTACCCATCGTGCCCCCTTAAAAACGGAATATACATCCCATGCATCCCACCACGACTCTACATCCTCTGTTGGGGATACCGCGACAACGCGGGCAAATGTACCACATTTGTCGATTGTTACGTATACCCAGGGCGTg < 7:288750/140‑1 (MQ=255)
aGTTTACCCAACCTGCCCCCTGAAAAACGCCATCTTCATCCAATGCATCCGAAGACGACTCTACATCCTCTGTTGGGGATACCGCGACAACGCGGGCAAATGTACCACATTTGTCGAGTGTTACGTATACCCAGGGCGTg < 4:1130962/140‑1 (MQ=255)
tttaaCCCATCCTCCCCCCTGAAAAACGGCATCTTCATCCCATGCATCCTACGACGACTCTACATCCTCTGTTGGGGATACCGCGACAACGCGGGCAAATGTACCACATTTGTCGATTGTTACGTATACCCAGGGCGTGc < 8:398097/136‑1 (MQ=255)
ttcacccacccGGCCCCGACAAAAACGCCATCTTCAACCCATGCTTCCGACGACGACTCTACATCCTCTGTTGGGGATACCGCGACAACGCGGGCAAATGTACCACATTTGTCGATTGTTACGTATACCCAGGGCGTg < 5:827055/135‑1 (MQ=255)
cccATCCTGCCCCCTGAAAAACGGCATCTTCATCCCATGCATCCGAAGACGACTCTACATCCTCTGTTGGGGATACCGCTACAACGCGGGCAAATGTACCACATTTGTCGATTGTTACGTATACCCAGGGCGTGCAGCAc > 1:584845/1‑140 (MQ=255)
cccATCCTGCCCCCTGAAAAACGGCATCTTCATCCCATGCATCCGAAGACGACTCTACATCCTCTGTTGGGGATACCGCGACAACGCGGGCAAATGTACCACATTTGTCGATTGTTACGTATACCCAGGGCGTGCAGAAc > 3:1021192/1‑140 (MQ=255)
cccATCCTGCCCCCTGAAAAACGGCATCTTCATCCCATGCATCCGAAGACGACTCTACATCCTCTGTTGGGGATACCGCGACAACGCGGGCAAATGTACCACATTTGTCGATTGTTACGTATACCCAGGGCGTGCAGAAc > 3:152897/1‑140 (MQ=255)
cccATCCTGCCCCCTGAAAAACGGCATCTTCATCCCATGCATCCGAAGACGACTCTACATCCTCTGTTGGGGATACCGCGACAACGCGGGCAAATGTACCACATTTGTCGATTGTTACGTATACCCAGGGCGTGCAGAAc > 8:422643/1‑140 (MQ=255)
cATCCTGCCCCCTGAAAAACGGCATCTTCATCCCATGCATCCGAAGACGACTCTACATCCTCTGTTGGGGATACCGCGCCAACGCGGGCAAATGTACCACATTTGTCGATTGTTACGTATACCCAGGGCGTGCAGAAc > 6:525364/1‑138 (MQ=255)
aTCCTGCCCCCTGAAAAACGGCATCTTCATCCCATGCATCCGAAGACGACTCTACATCCTCTGTTGGGGATACCGCGACAACGCGGGCAAATGTACCACATTTGTCGATTGTTACGTATACCCAGGGCGTGCAGAAcctg > 7:980584/1‑137 (MQ=255)
cgtgaccccTGAAAAACGGCATCTTCATCCAATGAATCCGAACACGACTCTACATCCTCTGTTGGGGATACCGCGACAACGCGGGCAAATGTACCACATTTGTCGATTGTTACGTATACCCAGGGCGTGCAGAACATAAt < 2:957046/135‑1 (MQ=255)
ccTGCCCCCTGAAAAACGGCATCTTCATCCCATGCATCCGAAGACGACTCTACATCCTCTGTTGGGGATACCGCGACAACGCGGGCAAATGTACCACATTTGTCGATTGTTACGTATACCCAGGGCGTGCAGAACATAAt > 2:915636/1‑140 (MQ=255)
ccTGCCCCCTGAAAAACGGCATCTTCATCCCATGCATCCGAAGACGACTCTACATCCTCTGTTGGGGATACCGCGACAACGCGGGCAAATGTAACACATTTGTCGATTGTTACGTATACCCAGGGCGTGCAGAACATAAt > 3:1107535/1‑140 (MQ=255)
ccTGCCCCCTGAAAAACGGCATCTTCATCCCAAGCATCCGAAGACGACTATACATCATCTGTTGGGGATACCGCGCCAACGCGGGCAAATGTACCACATTTGTCGATTGTTACGTATACCAAGGGCGTGCAGAACATAAt > 4:450286/1‑140 (MQ=255)
ccTGCCCACTGAAAAACGGCATCATCATCACATGCCTCCGAACACGACTCTACATCCTCTGTTGGGGATACCGCTACAACGCGGGCAAATGTACCACATTTGTCGATTGTTACGTATACCCAGTTAGTGCAGAACATAAt < 2:1072424/140‑1 (MQ=255)
cccTGAAAAACGGCATCTTCATCCCAAGCATCCGAAGACGACTCTACATCCTCTGTTGGCGATACCGCGACAACGAGGGCAAATGTACCACAATTCTCGAATGTTACGTATACCCAGTGCGTGCAGAACATAATCTCa > 5:911530/1‑138 (MQ=255)
ctcaaaacCGGCATCTGCAACCCATGCAGCGCACCACGACTCTACATCCTCTGTTGGGGATACCGCGACAACGCGGGCAAATGTACCACATTTGTCGATTGTTACGTATACCCAGGGCGTGCAGAACATAATCTCattat < 1:828138/137‑1 (MQ=255)
tGAAAAACGGCATCTTCATCCCATGCATCCGAAGACGACTCTACATCCTCTGTTGGGGATACCGCGACAACGCGGGCAAATGTACCACATTTGTCGATTGTTACg > 2:781530/1‑105 (MQ=255)
tGAAAAACGGCATCTTCATCCCATGCATCCGAAGACGACTCTACATCCTCTGTTGGGGATACCGCGACAACGCGGGCAAATGTACCACAATTGTCGATTGTTACGTATACCCAGGGCGTGCAGAACATAATCACattatt > 2:569253/1‑140 (MQ=255)
aaaCGGCAGCTTCACCCAATGCTCCCTTACACGACTCTACATCCTCTGTTGGGGATACCGCGACAACGCGGGCAAATGTACCACATTTGTCGATTGTTACGTATACCCAGGGCGTGCAGAACATAATCTCATTATTAg < 5:524424/138‑1 (MQ=255)
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CTTGCTGTGCCGCCACATCATTATTGACGCGAGTATAGTCATGTATACCGTTCTTACCGAACCACAGCGAATACTGTAGCCAGACCAGAATAGCCAGCAACAGCAGCGTTAGTTTACCCATCCTGCCCCCTGAAAAACGGCATCTTCATCCCATGCATCCGAAGACGACTCTACATCCTCTGTTGGGGATACCGCGACAACGCGGGCAAATGTACCACATTTGTCGATTGTTACGTATACCCAGGGCGTGCAGAACATAATCTCATTATTAGT > NZ_CP022686/1479471‑1479743
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| Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
N/A
