Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A10 F35 I0 R1
|
195 |
10216.4 |
8585726 |
98.3% |
8439768 |
135.8 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
freq |
annotation |
gene |
description |
| RA |
NZ_CP022686 |
2,572,705 |
A→C |
8.7% |
G191G (GGT→GGG) |
CIW80_RS12885 ← |
ROK family protein |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NZ_CP022686 | 2,572,705 | 0 | A | C | 8.7%
| 391.6
/ 9.3
| 208 | G191G (GGT→GGG) | CIW80_RS12885 | ROK family protein |
| Reads supporting (aligned to +/- strand): ref base A (98/87); new base C (2/21); total (100/108) |
| Fisher's exact test for biased strand distribution p-value = 3.47e-05 |
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 |
Only 100 of 212 total aligned reads displayed.
GGTTGCCAGCGTGCGGGCAAGCTGTTGGCGAAAACGTGCCACCTGCTGCATGGCACAAGCATCACCACGTTGTGCCAGGGTGACAATCGCCGCAGAAGTGAGCAAGTTACCAGTCATCTGTTGATAGCGTTCACTAAAACCGCTGCCGGAAACAAACGACTCCACGCAGTTGTGTTTGCCGCAATAGCAACTGACTGATGGACCATCTTCCTGCTCCGTATAGCCTGGCAACGTGATATGACCGCATTCGGCAGCATTTCCCCAGGCCCCTATA > NZ_CP022686/2572567‑2572840
|
gTTGCCAGCGTGCGGGCAAGCTGTTGGCGAAAACGTGCCACCTGCTGCATGGCACAAGCATCACCACGTTGTGCCAGGGTGACAATCGCCGCAGAAGTGAGCAAGTTACCAGTCATCTGTTGATAGCGTTCACTAAAAcc > 1:1094625/1‑140 (MQ=255)
cttcccAGCGTGCGGGCAAGCTGTAGGCGAAAACTTGCTACATGCTTCATGGCACAAGCATCACCACGTTGTGCCAGGGTGACAATCGCCGAAGAAGTGAGAAAGTAACCAGTCATCTGTTGATAGCATTCACTAAAAca > 2:250436/5‑139 (MQ=255)
ttGCCAGCGTGCGGGCAAGCTGTTGGCGAAAACGTGCCACCTGCTGCATGGCACAAGCATCACCACGTTGTGCCAGGGTGACAATCGCCGCAGAAGTGAGCAAGTTACCAGTCATCTGTTGATAGCGTTCACTAAAACCg < 4:617353/140‑1 (MQ=255)
tagCCAGCGTGCGGGCAAGCTGTTGGCGAAAACGTGCCACCTGCGGCATGGCACAAGCATCACCACGTTGTGCCAGGGTGACAATCGCCGCAGAAGTGAGCAAGTTACCAGTCATCTGTTGATAGCGTTCACTAAAACCg < 8:652509/138‑1 (MQ=255)
aGCGTGCGGGCAAGCTGTTGGCGAAATCGTGCCACCTGCTGCATGGCACAAGCATCACCACGTTGTGCCAGGGTGACAAGCGCCGCAGAAGTGAGCAAGTTACCAGACATCTGTTGATAGCGTTCACTAAAACCGCTGcc < 2:819902/140‑1 (MQ=255)
cGTGCGGGCAAGCTGTTGGCGAAAACGTGCCACCTGCTGCATGGCACAAGCATCACCACGTTGTGCCAGGGTGACAATCGCCGCAGAAGTGAGCAAGTTACCAGTCATCTGTTGATAGCGTTCACTAAAACCGCTGcc > 5:498935/1‑138 (MQ=255)
cGGGCAAGCTGTTGGCGAAAACGTGCCACCTGCTGCATGGCACAAGCATCAACACGTTGTGCCAGGGTGACAATCGCCGCAGAAGTGAGCAAGTTACCAGTCATCTGTTGATAGCGTTCACTAAAACCGCTGCCGGaa > 5:929660/1‑138 (MQ=255)
ttGGCTAAAACGCGCCCCCTGCTTCTGGGCACAACCAACACCAGGTTGGCCCTGGGTTACAAGCGCCGACGATGTGAGCATGTTACCAGACTTCTGTTGAACGCGTTCACTAAAACCGCTGCCGTAAACACACGACTCCa < 2:13328/140‑1 (MQ=255)
ggCGAAACCGGGCCCCCTGCTGCATGGCACAAGCATCACCCCGTGGTGCCTGGGTGACAATCGCCGCAGATGTGAGCAAGTTACCAGTCATCTGTTGATAGCGTTCACTAAAACCGCTGCCGCAAACAAACGACTCCACg < 1:456574/140‑1 (MQ=255)
ggCGAAAACGTGCCACCTGCTGCATGGCACAAGCATCACCACGTTGTGCCTGGGTGACAATCGCCGCAGAAGTGAGCAAGTTACCAGTCATCTGTTGATAGCGTTCACTAAAACCGCTGCCGGAAACAAACGACTCCACg < 3:57804/140‑1 (MQ=255)
ggCGAAAACGTGCCACCTGCGGCATGGCACAAGCATCACCCCGTGGTGCCTGGGGGACAATCGCCTCAGAAGTGAGCACGTTCCCAGTCATCTGTTGAAAGCGTTCACTAAAACCGCTGCCGGAAACACACGACTCCACg < 8:804713/140‑1 (MQ=255)
gCCACCTGCTGCATGGCACAAGCATCACCACGTTGTGCCAGGGTGACAATCGCCGCAGAAGTGAGCAAGTTACCAGTCATCTGTTGATAGCGTTCACTAAACCCGCTGCCGGAAACAAACGACTCCACGCAGTTGTGttt < 2:678401/140‑1 (MQ=255)
gctgcATGGCACTAGCAGCACCACGTTGTGCCAGGGTGCCACTCCCCCCAGATGTGAGCAAGTAACCAGTCTGGTTTTTATAGCGTTCACAAAAACCGCTGCCGGAAACAAACGACTCCACGCAGTTGTGTTTGCCGCaa < 4:149360/140‑1 (MQ=255)
gctgcATGCCACAAGCAACACCACGTTGTGCCAGGGTGACAATCGCCGCAGAAGTTAGCAAGTTACCAGTCATCTGTTGATAGCGTTCACTAAAACCGCTGCCGGAAACAAACGACTCCACGCAGTTGTGTTTGCCGCaa < 4:1064229/140‑1 (MQ=255)
ctgcATGGCACAAGCATCACCACGTTGTGCCAGGGTGACAATCGCCGCAGAAGTGAGCAAGTTACCAGTCATCTGTTGATAGCGTTCACTAAAACCGCTGCCGGAAACAAACGACTCCACGCAGTTTTGTGTGCAGCAAt > 7:55450/1‑140 (MQ=255)
gcATGGCACAAGCATCACCACGTTGTGCCAGGGTGACAATCGCCGCAGAAGTGAGCAAGTTACCAGTCATCTGTTGATAGCGTTCACTAAAACCGCTGCCGGAAACAAACGACTCCACGCAGTTGTGTTTGCCGCAAt > 6:489271/1‑138 (MQ=255)
gcATGGCACAAGCATCACAACGTTGGGCCTGGGTGACACTCGCCGCTGAAGTGAGCAAGTTACCAGTCATCTGTTGATCGCGTTCAATAAAACCGCTGCCGGAAACAAACGACTCCACGCAGTTGTGTTTGCCGCAATAg < 1:1058836/140‑1 (MQ=255)
caggccacaAGCATCACCACTTTGTGCCTGGGTGACAATGCCCGAAGACGTCATCATGGTACAAGGCATCTGTTGTTTGGGTTCACTAACCCCGCGGCCGCAAACAAACGACTCCACGCAGTTGTGTTTGCCGCAATAGc < 8:180703/135‑1 (MQ=255)
tGGCACAAGCATCACCACGTTGTGCCAGGGTGACAATCGCCGCAGAAGTGAGCAAGTTACCAGTCATCTGTTGATAGAGTTCACTAAAACAGCTGCCGGAAACAAACGACTCCACGCAGTTTTGTTTTCCGCAATATCaa > 2:451742/1‑140 (MQ=255)
gggCACAAGCATCACCACTTGTTGCCTGGGTGACAAGCGCCGCCGAAGTGAGCAAGTTACCTGTCTTCTGTTGATAGCGTTCAATAAAACCCCTGCCGGAAACAAACGACTCCACGCAGTTGTGTTTGCCGCAATAGCaa < 8:300419/139‑1 (MQ=255)
gCACAAGCATCCCCACGTTGGGCATGGGTGACAATCGCCGCAGAAGTGAGCAAGTTACCAGTCATCTGTTGATAGCGTTCACTAAAACCGCTGCCGGAAACAAACGACTCCACGCAGTTGTGTTTGCCGCAATAGCaa < 5:254475/138‑1 (MQ=255)
gCACAAGCATCACCACGTTGTGCCAGGGTGACAATCGCCGCAGAAGTGAGCAAGTTACCAGTCATCTGTTGATAGCGTTCACTAAAACCGCTGCCGGAAACAAACGACTCCTCGCAGTTGTGTTTGCCGCAATAGCaa < 6:651976/138‑1 (MQ=255)
ccacaAGCATCACACCTTTGTGCCTGGGTTACAATCGCCGAAGATGTGAGCAAGTTACCAGTCATCTGTTGATAGCGTTCACTAAAACCGCTGCCGTAAACAAACGACTCCACGCAGTTGTGTTTGCCGCAATAGCAact < 8:903901/139‑1 (MQ=255)
cacaAGCATCACCACGTTGTGCCAGGGTGACAATCGCCGCAGAAGTGAGCAAGTTACCAGTCATCTGTTGATAGCGTTCACTAAAACCGCTGCCGGAAACAAACGACTCCACGCAGTTGTGTTTGCCGCAATAGCAactg > 4:1071683/1‑140 (MQ=255)
aaGCATCACCACGTTGTGCCAGGGTGACAATCGCCGCAGAAGTGAGCAAGTTACCAGTCATCTGTTGATAGCGTTCACTAAAACCGCTGCCGGAAACAAACGACTCCACGCAGTTGTGTTTGCCGCAATAGCAactgact > 3:826464/1‑140 (MQ=255)
gCATCACCACGTTGTGCCAGGGTGACAATCGCCGCAGAAGTGAGCAAGTTACCAGTCATCTGTTGATAGCGTTCACTAAAACCGCTGCCGGAAACAAACGACTCCACGCAGTTGTGTTTGCCGCAATAGCAActgactga > 8:766113/1‑140 (MQ=255)
cttCACCACTGTGTCCCAGGGTGAAAATACCCGCATAATTTAGCAAGTTACAAGTCATCTGTTGATAGCGTTCACAAAAACAGATGCCGTAAACAAAAGACTCCACGCAGTTGTGTTTGAAGCAATAGCAACTGACTGAt < 4:924360/138‑1 (MQ=255)
caccacGTTGTGCCAGGGTGACAATCGCCTCAGAAGTGAGCAATTTACCAGTCATATGTTGATAGCGTTCACTAAAACCGCTGCCGTAAACAAACGACTCCACGCAGTTGTGTTTGCCGCAATAGCAACTGACTGATGGa < 2:1011244/140‑1 (MQ=255)
cccacGTTGTGCCCGGGTGACAATCGCCGCAGAAGTCAGAAAGTTACCAGTCATCTTTTGATCGCGTTCACTAAAACCGCTGCCGGAAACACACGACTCCACGCAGTTGTGTTTGCCGCAATAGCAACTGACTGATGGAc < 2:939770/139‑1 (MQ=255)
accacGTTGTGCCAGGGTGACAATCGCCGCAGAAGTGAGCAAGTTACCAGTCATCTGTTGATAGCGTTCACTAAAACCGCTGCCGGAAACAAACGACTCCACGCAGTTGTGTTTGCCGCAATAGCAACTGACTGATGGAc > 7:971143/1‑140 (MQ=255)
accacGTTGTGCCAGGGTGACAATCGCCGCAGAAGTGAGCAAGTTACCAGTCATCTGTTGATAGCGTTCACTAAAACCGCTGCCGGAAACAAACGACTCCACGCAGTTGTGTTTGCCGCAATAGCAACTGACTGATGGAc > 1:854464/1‑140 (MQ=255)
accacGTTGTGCCAGGGTGACAATCGCCGCAGAAGTGAGCAAGTTACCAGTCATCTGTTGATAGCGTTCACTAAAACCGCTGCCGGAAACAAACGACTCCACGCAGTTGTGTTTGCCGCAATAGCAACTGACTGATGGAc > 2:191966/1‑140 (MQ=255)
accacGTTGTGCCAGGGTGACAATCGCCGCAGAAGTGAGCAAGTTACCAGTCATCTGTTGATAGCGTTCACTAAAACCGCTGCCGGAAACAAACGACTCCACGCAGTTGTGTTTGCCGCAATAGCAACTGACTGATGGAc > 4:982739/1‑140 (MQ=255)
accacGTTGTGCCAGGGTGACAATCGCCGCAGAAGTGAGCAAGTTACCAGTCATCTGTTGATAGCGTTCACTAAAACCGCTGCCGGAAACAAACGACTCCACGCAGTTGTGTTTGCCGCAATAGCAACTGACTGATGGAc > 3:718840/1‑140 (MQ=255)
ccctttGGGCCTGGGTGACAATCGCCGCAGAAGTTAGCATGTTACCAGTCATCTGTTTATAGCGTTAACTAAACCGGCTGCCGTAAACAAACGACTCCACGCAGTTGTGTTTGCCGCAATAGCAACTGACTGATGGACCa < 7:489665/136‑1 (MQ=255)
cacTTTGTGCCAGGGTGACAATCGCCGATGAAGTGAGCATGTTACCTGTCATCTGTTGATAGCGTTCACTAAAACCGCTGCCGCAAACAAACGACTCCACGCAGTTGTGTTTGCCGCAATAGCAACTGACTGATGGACCa < 3:342810/140‑1 (MQ=255)
cacGTTGTGCCTGGGGGACAAGCCCCGCATAAGTGAGCATTTAACCTGTCATCTGTTAAATGCGTGCAATAAACCCGCGGCCGCAAACACACGACTCCACGCAGTTGTGTTTGCCGCAATAGCAACTGACTGATGGACCa < 1:665874/140‑1 (MQ=255)
cacGTTGTGCCAGGGTGACAATCGCCGCAGAAGTGAGCAAGTTACCAGTCATCTGTTGATAGCGTTCACTAAAACCGCTGCCGGAAACAAACGACTCCACGCAGTTGTGTTTGCCGCAATAGCAACTGACTGATGGAc > 6:230380/1‑138 (MQ=255)
cacGTTGTGCCAGGGTGACAATCGCCGCAGAAGTGAGCAAGTTACCAGTCATCTGTTGATAGCGTTAACTAAAACCGCTGCCGGAAACAAACGACTCCACGCAGTTGTGTTTGCCGCAATAGCAACTGACTGATGGAc > 5:825757/1‑138 (MQ=255)
tgtgCCTGGGTGACAATCGCCGCAGAAGTCAGCAAGTTACCATTAATCTGTTGATCGCGTTCAATAAAACCGCTGCCGGAAACAAACGACTCCACGCAGTTGTGTTTGCCGCAATAGCAACTGACTGATGGACCATCTTc < 4:841960/140‑1 (MQ=255)
tgtgCCAGGGTGACAATCGCCGCAGAAGTGAGCAAGTTACCAGTCATCTGTTGATAGCGTTCCCTAAAACCGCTGCCGGAAACAAACGACTCCACGCAGTTGTGTTTGCCGCAATAGCAACTGACTGATGGACCATCTTc > 3:435972/1‑140 (MQ=255)
tgtgCCAGGGTGACAATCGCCGCAGAAGTGAGCAAGTTACCAGTCATCTGTTGATAGCGTTCACTAAAAACGCTGCCGGAAACAAACGACTCCACGCAGTTGTGTTTGCCGCAATAGCAACTGACTGATGGACCATCTTc > 8:115331/1‑140 (MQ=255)
tgtgCATGGGTGACAATCGCCTCAGAAGTGAGCAAGTTACCAGTCATCTGTTGATTGCGTTAACTAAAACCGCTGCCGCAAACAAACGACTCCACGCAGTTGTGTTTGCCGCAATAGCAACTGACTGATGGACCATCTTc < 4:837476/140‑1 (MQ=255)
ggtgCCTGGGTGACAATCGCCGCAGAAGTGAGCAAGTTACCCGCCATCTGTTGTTCGCGTTCACTAAAACCGCTGCCGGAACCAAACGACTCCACGCAGTTGTGTTTGCCGCAATAGCAACTGACTGATGGACCATCt < 5:616723/137‑1 (MQ=255)
gtgCCAGGGTGACAATCGCCGCAGAAGTTAGCAAGTTACCAGTCATCTGTTGATAGCGTTCACTAAAACCGCTGCCGGAAACAAACGACTCCACGCAGTTGTGTTTGCCGCAATAGCAACTGACGGATGGACAATCtt > 6:399297/1‑138 (MQ=255)
tgCCAGGGTGACAATCGCCGCAGAAGTGAGCAAGTTACCAGTCATCTGTTGATAGCGTTCACTAAAACCGCTGCCGGAAACAAACGACTCCACGCAGTTGTGTTTGcc > 3:662736/1‑108 (MQ=255)
gcaaGGGTGACCATCGCCGCAGAAGTTAGCAAGTTACCAGTCATCTGTTGATAGCTTTCAATAAACCCGCTGCGGGAAACAAACGACTCCACGCAGTTGTGTTTGCCGCAATAGCAACTGACTGATGGACCATCTTCCTg < 2:239182/137‑1 (MQ=255)
gCCAGGGTGACAATCTCCCAAGAAGTTCGAAAGTTACCCTTCATCTGTTTATTGCGTTCACTAAAACGGCTGCGGTAAACAAACGACTCCACGCTGTTGTGTTTGCCGCAATAGCAACTGACTGATGGACCATCTTCCTg < 3:272337/140‑1 (MQ=255)
ctgggTGACAATCCCCGCACACGTGAGCAAGTAACCCTGAATCTGTTGATAGCGTTCACTAAAACCGCTGCCGGAAACAAACGACTCCACGCAGTTGTGTTTGCCGCAATAGCAACTGACTGATGGACCATCTTCCTGCt < 8:104904/138‑1 (MQ=255)
cAGGGTTAAAATCGCCGCAGATGTGAGCAAGTTACCAGTCCTCTTTTGATAGCGTTCACTAAAACCGCTGCCGTAAACAAACGACTCCACGCAGTTGTGTTTGCCGCAATAGCAACTGACTGATGGACCATCTTCCTGCt < 4:787281/140‑1 (MQ=255)
cAGGGGTACAATCGCCGAATATGTGAGCAAGTTCCCATTCATCTGTTGATAGCGTTCACTAAAACCGCTGCCTGAAACAAACGACTCCACGCAGTTGTGTTTGCCGCAATAGCAACTGACTGATGGACCATCTTCCTGCt < 4:143815/140‑1 (MQ=255)
cAGGGGCACAATCGCCGCAGAAGTGAGCATGTTACCAGTCATCTGTTGATAGCGTTCACTAAAACCGCTGCCGGAAACACACGACTCCACGCAGTTGTGTTTGCCGCAATAGCAACTGACTGATGGACCATCTTCCTGCt < 8:389031/140‑1 (MQ=255)
gggTGACAATCGCCGCAGAAGTGAGCAAGTTACCAGTCATCTGTTGATAGCGTTCACTAAAACCGCTGCCGGAAACAAACGACTCCACGCAGTTGTGTTTGCCGCAATAGCAACTGACTGATGGACCATCTTCCTGCTcc > 4:425060/1‑140 (MQ=255)
ggTGACAATCGCCGCAGAAGTGAGCAAGTTACCAGTCATCTGTTGATAGCGTTCACTAAAACCGCTGCCGGAAACAAACGACTCCACGCAGTTGTGTTTGCCGCAATAGCAACTGACTGATGGACCATCTTCCTGCTCCg > 7:169886/1‑140 (MQ=255)
gTGACAATCGCCGCAGAAGTGAGCAAGTTACCAGTCATCTGTTGATAGCGTTCACTAAAACCGCTGCCGGAAACAAACGACTCCACGCAGTTGTGTTTGCCGCAATAGCAACTGACTGATGGACCATCTTCCTGCTcc > 6:778028/1‑138 (MQ=255)
tGACAATCGCCGCAGAAGTGAGCAAGTTACCGGTCATCTGTTGATAGCGTTCACTAAACCCGCTGCCGGAAACAAACGACTCCACGCAGTTGTGTTTGCCGCAATAGCAACTGACTGATGGACCATCTTCCTGCTCCg > 6:943855/1‑138 (MQ=255)
tGACAATCGCCGCAGAAGTGAGCAAGTTACCAGTCATCTGTTGATAGCGTTCACTAAAACCGCTGCCGGAAACAAACGACTCCACGCAGTTGTGTTTGCCGCAATAGCAACTGACTGATGGACCATCTTCCTGCTCCg < 6:906870/138‑1 (MQ=255)
tGACAATCGCCGCAGAAGTGAGCAAGTTACCAGTCATCTGTTGATAGCGTTCACTAAAACCGCTGCCGGAAACAAACGACTCCACGCAGTTGTGTTTGCCGCAATAGCAACTGACTGATGGACCATCTTCCTGCTCCGta < 2:983043/140‑1 (MQ=255)
aCAATCGCCGCAGAAGTGAGCAAGTTACCAGTCATCTGTTGATAGCGTTCACTAAAACCGCTGCCGGAAACAAACGACTCCCCGCAGTTGTGTTTGCCGCAATAGCAACTGACTGATGGACCATCTTCCTGCTCCGtata > 2:91776/1‑140 (MQ=255)
aCAATCGCCGCAGAAGTGAGCAAGTTACCAGTCATCTGTTGATAGCGTTCACTAAAACCGCTGCCGGAAACAAACGACTCCACGCAGTTGTGTTTGCCGCAATAGCAACTGACTGATGGACCATCTTCCTGCTCCGtata > 4:1070452/1‑140 (MQ=255)
aCAATCGCCGCAGAAGTGAGCAAGTTACCAGTCATCTGTTGATAGCGTTCACTAAAACCGCTGCCGGAAACAAACGACTCCACGCAGTTGTGTTTGCCGCAATAGCAACTGACTGATGGACCATCTTCCTGCTCCGtata > 3:885570/1‑140 (MQ=255)
aCAATCGCCGCAGAAGTGAGCAAGTTACCAGTCATCTGTTGATAGCGTTCACTAAAACCGCTGCCGGAAACAAACGACTCCACGCAGTTGTGTTTGCCGCAATAGCAACTGACTGATGGACCATCTTCCTGCTCCGtata > 4:531905/1‑140 (MQ=255)
aCAATCGCCGCAGAAGTGAGCAAGTTACCAGTCATCTGTTGATAGCGTTCACTAAAACCGCTGCCGGAAACAAACGACTCCACGCAGATGTGTTTGCCGCAATAGCAACTGACTGATGGACCATCTTACTGCTCCGtata > 7:178532/1‑140 (MQ=255)
tCGCCGCAGAAGTGAGCAAGTTACCAGTCATCTGTTGATAGCGTTCACTAAAACCGCTGCCGGAAACAAACGACTCCACGCAGTTGTGTTTGCCGCAATAGCAACTGACTGATGGACCATCTTCCTGCTCCGTATAGCCt > 1:48215/1‑140 (MQ=255)
cgccgaAGAACTGAGCAAGTTACCAGTCATCTGTTGATAGCGTTCACTAAAACCGCTGCCGTAAACAAACGACTCCACGCAGTTGTGTTTGCCGCAATAGCAACTGACTGATGGACCATCTTCCTGCTCCGTATAGCCTg < 4:605400/140‑1 (MQ=255)
ccgcAGAAGTGAGCAAGTTACCAGTCATCTGTTGATAGCGTTCACTAAAACCGCTGCCGGAAACAAACGACTCCACGCAGTTGTGTTTGCCGCAATAGCAACTGACTGATGGACCATCTTCCTGCTCCGTATAGCCTGGc > 3:993208/1‑140 (MQ=255)
gcATAAGTGCGCAAGTTACCAGTCATCTTTTGATCGCGTTCACAAAACCCGCGGCCGCAAACACACGACTCCACGCAGTTGTGTTTGCCGCAATAGCAACTGACTGATGGACCATCTTCCTGCTCCGTATAGCCTGGCaa < 7:910853/140‑1 (MQ=255)
gcAGAAGTGAGCAAGTTACCAGTCATCTGTTGATAGCGTTCACTAACACCGCTGCCGGAAACAAACGACTCCACGCAGTTGTGTTTGCCGCAATAGCAACTGACAGATGGACCATCTTCCTGCTCCGTATAGCCTGGc > 5:333220/1‑138 (MQ=255)
cAGAAGTGAGCAAGTTACCAGTCATCTGTTGATAGCGTTCACTAAAACCGCTGCCGGAAACAAACGACTCCACGCAGTTGTGTTTGCCGCAATAGCAACTGACTGATGGACCATCTTCCTGCTCCGTATAGCCTGGCAAc > 4:362459/1‑140 (MQ=255)
cAGAAGTGAGCAAGTTACCAGTCATCTGTTGATAGCGTTCACTAAAACCGCTGCCGGAAACAAACGACTCCACGCAGTTGTGTTTGCCGCAATAGCAACTGACTGATGGACCATCTTCCTGCTCCGTATAGCCTGGCAAc > 3:100424/1‑140 (MQ=255)
gCAAGTTACCAGTCATCTGTTGATAGCTTTCACTAAAACCGCTGCCTGAAACAAACGACTCCACGCAGTTGTGTTTGCCGCAATAGCAACTGACTGATGGACCATCTTCCTGCTCCGTATAGCCTGGCAACGTGatat < 6:289055/138‑1 (MQ=255)
gCAAGTTACCAGTCATCTGTTGATAGCGTTCACTAAAACCGCTGCCGTAAACAAACGACTCCACGCAGTTGTGTTTGCCGCAATAGCAACTGACTGATGGACCATCTTCCTGCTCCGTATAGCCTGGCAACGTGATATGa < 2:1067291/140‑1 (MQ=255)
cAAGTTACCAGTCATCTGTTGATAGCGTTCACTAAAACCGCTGCCGGAAACAAACGACTCCACGCAGTTGTGTTTGCCGCAATAGCAACTGACTGATGGACCATCTTCCTGCTCCGTATAGCCTGGCAACGTGATATg > 6:500073/1‑138 (MQ=255)
cAAGTTACCAGTCATCTGTTGATAGCGTTCACTAAAACCGCTGCCGGAAACAAACGACTCCACGCAGTTGTGTTTGCCGCAATAGCAACTGACTGATGGACCATCTTCCTGCTCCGTATAGCCTGGCAACGTGATATGAc > 8:498702/1‑140 (MQ=255)
ttACCAGTCATCTGTTGATAGCGTTCACTAAAACCGCTGCCGGAAACAAACGACTCCACGCAGTTGTGTTTGCCGCAATAGCAACTGACTGATGGACCATCTTCCTGCTCCGTATAGCCTGGCAACGTGATATGACCGCa < 3:107514/140‑1 (MQ=255)
gTCATCTGTTGATAGCGTTCACTAAAACCGCTGCCGGAAACAAACGACTCCACGCAGTTGTGTTTGCCGCAATAGCAACTGACTGATGGACCATCTTCCTGCTCCGTATAGCCTGGCAACGTGATATGACCGCATTCg > 6:119204/1‑138 (MQ=255)
actCTGTTCATAGCGTTCACAAAAACCTCTGCCGGAACCAAACGACTCCACGCAGTTGTGTTTGCCGCAATAGCAACTGACTGATGGACCATCTTCCTGCTCCGTATAGCCTGGCAACGTGATATGACCGCATTCGgcag < 8:204705/138‑1 (MQ=255)
aTCTGTTGATAGCGTTCACTAAAACCGCTGCCGGAAACAAACGCCTCCACGCAGTTGTGTTTGCCGCAATAGCAACTGACTGATGGACCATCTTCCTGCTCCGTATAGCCTGGCAACGTGATATGACCGCATTCGgcagc > 3:217901/1‑140 (MQ=255)
aTCTGTTGATAGCGTTCACTAAAACCGCTGCCGGAAACAAACGCCTCCACGCAGTTGTGTTTGCCGCAATAGCAACTGACTGATGGACCATCTTCCTGCTCCGTATAGACTGGCAACGTGATATGACCGCATTCGgcagc > 8:143333/1‑140 (MQ=255)
tCTGTTGATAGCGTTCACTAAAACCGCTGCCGGAAACAAACGACTCCACGCAGTTGTGTTTGCCGCAATAGCAACTGACTGATGGACCATCTTCCTGCTCCGTATAGCCTGGCAACGTGATATGACCGCATTCGgcagca < 3:148632/140‑1 (MQ=255)
ttGTTTATAGCGTTCACTAAAACCGCTGCCGTAAACACACGACTCCACGCAGTTGTGTTTGCCGCAATAGCAACTGACTGATGGACCATCTTCCTGCTCCGTATAGCCTGGCAACGTGATATGACCGCATTCGGCAGCAt < 4:728951/139‑1 (MQ=255)
cTGTTTATCGCGTTCACAAAAACCGCTGCCGTAAACAAACGACTCCACGCAGTTGTGTTTGCCGCAATAGCAACTGACTGATGGACCATCTTCCTGCTCCGTATAGCCTGGCAACGTGATATGACCGCATTCGgcagc < 5:362381/138‑1 (MQ=255)
cTGTTTATAGCGTTCAATAAAACCGCTGCCGCAAAAAAACGACTCCACGCAGTTGTGTTTGCCGCAATAGCAACTGACTGATGGACCATCTTCCTGCTCCGTATAGCCTGGCAACGTGATATGACCGCATTCGGCAGCAt < 1:547758/140‑1 (MQ=255)
aGCGTTCACTAAAACCGCTGCCGGAAACAAACGACTCCACGCAGTTGTGTTTGCCGCAATAGCAACTGACTGATGGACCATCTTCCTGCTCCGTATAGCCTGGCAACGTGATATGACCGCATTCGGCGGCATTTCCCCAg > 4:324014/1‑140 (MQ=255)
aGCGTTCACTAAAACCGCTGCCGGAAACAAACGACTCCACGCAGTTGTGTTTGCCGCAATAGCAACTGACTGATGGACCATCTTCCTGCTCCGTATAGCCTGGCAACGTGATATGACCGCATTCGGCAGCATTTcccc > 5:546500/1‑138 (MQ=255)
aGCGTTCACTAAAACCGCTGCCGGAAACAAACGACTCCACGCAGTTGTGTTTGCCGCAATAGCAACTGACTGATGGACCATCTTCCTGCTCCGTATAGCCTGGCAACGTGATATGACCGCATTCGGCAGCATTTCCCCAg > 3:171060/1‑140 (MQ=255)
gggTTCACTAAAACCGCTGCCGTAAACACACGACTCCACGCAGTTGTGTTTGCCGCAATAGCAACTGACTGATGGACCATCTTCCTGCTCCGTATAGCCTGGCAACGTGATATGACCGCATTCGGCAGCATTTCCCCAgg < 8:457955/138‑1 (MQ=255)
gctttCACTAAAACCGATGCCGTAAAAAAACGACTCCACTCAGTTGTGTTTGCCGCAATAGCAACTGACTGATGGACCATCTTCCTGCTCCGTATAGCCTGGCAACGTGATATGACCGCATTCGGCAGCATTTCCCCAgg < 4:476377/137‑1 (MQ=255)
gCGTTCACTAAAACCGCTGCCGGAATCGAACGACTCCACTCAGTTGTGTTTGCCGCAATAGCAACTGACTGATTGACCATCTTCCTGCTCCGTATAGCCTGGCAACGTGATATGACCGCATTCGGCAGCATTTCCCCAgg < 1:330780/140‑1 (MQ=255)
gCGTTCACTAAAACCGCTGCCGGAAACAAACGACTCCACGCAGTTGTGTTTGCCGCAATAGCAACTGACTGATGGACCATCTTCCTGCTCCGTATAGCCTGGCAACGTGATATGACCGCATTCGGCAGCATTTCCCCa < 6:546500/138‑1 (MQ=255)
gCGTTCACTAAAACCGCTGCCGGAAACAAACGACTCCACGCAGTTGTGTTTGCCGCAATAGCAACTGACTGATGGACCATCTTCCTGCTCCGTATAGCCTGGCAACGTGATATGACCGCATTCGGCAGCATTTCCCCAgg < 2:732665/140‑1 (MQ=255)
gCGTTCACTAAAACCGCTGCCGGAAACAAACGACTCCACGCAGTTGTGTTTGCCGCAATAGCAACTGACTGATGGACCATCTTCCTGCTCCGTATAGCCTGGCAACGTGATATGACCGCATTCGGCAGCATTTCCCCAgg < 4:826464/140‑1 (MQ=255)
gCGTTCAATAAACCCGCGGCGTCAAACACACGACTCCACGGAGTTGGGTTTGCCGCAATAGCAACTGACTGATGGACCATCTTCCTGCTCCGTATAGCCTGGCAACGTGATATGACCGCATTCGGCAGCATTTCCCCAgg < 1:359448/140‑1 (MQ=255)
cGTTCACTAAAACCGCTGCCGGAAACAAACGACTCCACGCAGTTGTGTTTGCCGCAATAGCAACTGACTGATGGACCATCTTCCTGCTCCGTATAGCCTGGCAACGTGATATGACCGCATTCGGCAGCATTTCCCCAGGc > 3:911636/1‑140 (MQ=255)
cGTTCACTAAAACCGCTGCCGGAAACAAACGACTCCACGCAGTTGTGTTTGCCGCAATAGCAACTGACTGATGGACCATCTTCCTGCTCCGTATAGCCTGGCAACGTGATATGACCGCATTCGGCAGCATTTCCCAAGGc > 1:574956/1‑140 (MQ=255)
cGTTCACTAAAACCGCAGCCGGAAACAAACGACTCCACGCAGTTGTGTTTGCCGCAATAGCAACTGACTGATGGACCATCTTCCTGCTCCGTATAGACTGGCAACGTGATATGCCCGCATTCGGCATCAATTCACCAGGc > 7:527688/1‑140 (MQ=255)
tacaaaaaaaCGGCTGCCGTAAACAAACGACTCCACGCAGTTGTGTTTGCCGCAATAGCAACTGACTGATGGACCATCTTCCTGCTCCGTATAGCCTGGCAACGTGATATGACCGCATTCGGCAGCATTTCCCCAGGccc < 7:710878/134‑1 (MQ=255)
tCACTAAACCCGCTGCCGGAAACAAACGACTCCACGCAGTTGTGTTTGCCGCAATAGCAACTGACTGATGGACCAGCTTCCTGCGCCGTATAGCCTGGCAACGTGATATGCCCGCATTCGGCAGCAGTTCCCCAGGcccc > 4:881813/1‑140 (MQ=255)
tCACTAAAACCGCTGCCGGAAACAAACGACTCCACGCAGTTGTGTTTGCCGCAATAGCAACTGACTGATGGACCATCTTCCTGCTCCGTATAGCCTGGCAACGTGATATGACAGCATTCGGCAGCATTTCCCCAGGcccc > 7:1018270/1‑140 (MQ=255)
aCTAAAACCGCTGCCGGAAACAAACGACTCCACGCAGTTGTGTTTGCCGCAATAGCAACTGACTGATGGACCATCTTcc < 6:264949/79‑1 (MQ=255)
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GGTTGCCAGCGTGCGGGCAAGCTGTTGGCGAAAACGTGCCACCTGCTGCATGGCACAAGCATCACCACGTTGTGCCAGGGTGACAATCGCCGCAGAAGTGAGCAAGTTACCAGTCATCTGTTGATAGCGTTCACTAAAACCGCTGCCGGAAACAAACGACTCCACGCAGTTGTGTTTGCCGCAATAGCAACTGACTGATGGACCATCTTCCTGCTCCGTATAGCCTGGCAACGTGATATGACCGCATTCGGCAGCATTTCCCCAGGCCCCTATA > NZ_CP022686/2572567‑2572840
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| Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
N/A
