Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A6 F35 I0 R1
|
157 |
6985.9 |
8006972 |
98.3% |
7870853 |
134.9 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
freq |
annotation |
gene |
description |
| RA |
NZ_CP022686 |
1,674,224 |
T→G |
21.8% |
K188N (AAA→AAC) |
ygfB ← |
UPF0149 family protein YgfB |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NZ_CP022686 | 1,674,224 | 0 | T | G | 21.8%
| 179.9
/ 18.9
| 130 | K188N (AAA→AAC) | ygfB | UPF0149 family protein YgfB |
| Reads supporting (aligned to +/- strand): ref base T (30/69); new base G (27/3); total (58/72) |
| Fisher's exact test for biased strand distribution p-value = 5.18e-09 |
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 |
Only 100 of 139 total aligned reads displayed.
CTGGTGCAGCAAAAATCAGCGCGGCGCTGCCGGGTTGCATTTGCTCTACCAGGGCCTGACGGCGACGCTGAAACTCTTGCCGGGATATATCACTCATAACACTCTCCTTACATTTTTTGTTTTTAGTGTAGAGTCGGTTTTTGTACTTCTGGCGCGGTCGGTTGCGGATGAGTAAAGGTGTC‑GTGGCATAACAGCGCGGCAACACGGACGTACTCGATGATCTCTTCAAGCGACATTTCAAGCTCTTCCTGATCTTCGTCTTCGTCGTAACCC > NZ_CP022686/1674087‑1674359
|
cTGGTGCAGCAAAAATCAGCGCGGCGCTGCCGGGTTGCATTTGCTCTACCAGGGCCTGACGGCGACGCTGAAACTCTTGCCGGGATATATCACTCATAACACTCTCCTTACATTTTTTGTTTTTAGTGTAGAGTCGGttt > 7:346094/1‑140 (MQ=255)
ggTGCAGCAAAAATCAGCGCGGCGCTTCCGGGTTGCAGATGCTCTACCAGGGCCTGACGCCGCCGCTGAAACTCTTGCCGGGATATATCACTCATAACACGCTCCTTACATTATTTGTTTTTAGTGTAGAGTCGGgtt > 6:755643/1‑138 (MQ=255)
ggTGCAGCAAAAATCAGCGCGGCGCTGCCGGGTTGCATTTGCTCTACCAGGGCCTGACGGCGACGCTGAAACTCTTGCCGGGATATATCACTCATAACACTCTCCTTACATTTTTTGTTTTTAGTGTAGAGTCGGgtttt > 7:313975/1‑140 (MQ=255)
ggTGCAGCAAAAATCAGCGCGGCGCTGCCGGGTTGCATTTGCTCTACCAGGGCCTGACGGCGACGCTGAAACTCTTGCCGGGATATATCACTCATAACACTCTCCTTACATTTTTTGTTTTTAGTGTAGAGTCGGgtttt > 8:338023/1‑140 (MQ=255)
gTGCAGCAAAACTCAGCGCGGCGCTGCCGGGTTGCATTTGCTCTACCAGGGCCTGACGGCGACGCTGAAACTCTTGCCGGGATATATCACTCATAACACTCTCCTTACATTTTTTGTTTTTAGTGTAGAGTCGGtttt < 1:191846/138‑1 (MQ=255)
gTGCAGCAAAAATCAGCGCGGCGCTGCCGGGTTGCATTTGCTCTACCAGGGCCTGACGGCGACGCTGAAACTCTTGCCGGGATATATCACTCATAACACTCTCCTTACATTTTTTGTTTTTAGTGTAGAGTCGGtttt < 2:629733/138‑1 (MQ=255)
gTGCAGCAAAAATCAGCGCGGCGCTGCCGGGTTGCATTTGCTCTACCAGGGCCTGACGGCGACGCTGAAACTCTTGCCGGGATATATCACTCATAACACTCTCCTTACATTTTTTGTTTTTAGTGTAGAGTCGGTTTTTg < 8:788024/140‑1 (MQ=255)
tGCAGCAAAAATCAGCGCGGCGCTGCCGGGTTGCATTTGCTCTACCAGGGCCTGACGGCGACGCTGAAAATCGTGCCGGGCTATATCACTAATAACCCTCTCCTTACATTTTTTGTTTTTAGGGTAGATGCGGtgttt > 4:607291/1‑138 (MQ=255)
cagcaAAAATCAGCGCGGCGCTGCCGGGTTGCATTTGCTCTACCAGGGCCTGACGGCGACGCTGAAACTCTTGCCGGGATATATCACTCATAACACTCTCCTTACATTTTTTGTTTTTAGTGTAGAGTCGGGTTTTGTAc > 7:769162/1‑140 (MQ=255)
gcaAAAATCAGCGCGGCGCTGCCGGGTTGCATTTGCTCTACCAGGGCCTGAAGGAGACGCTGAAACTCTTGCAGGGATATATAACTCATAACACTCTCATTACATTTTTTGTTTTTAGTGTAGAGTCGGGTTTTGtcaat > 7:548607/1‑136 (MQ=255)
aaaaaTCAGCGCGGCGCTGCCGGGTTGCATTTGCTCTACCAGGGCCTGACGGCGACGCTGAAACTCTTGCCGGGATATATCACTCATAACACTCTCCTTACATTTTTTGTTTTTAGTGTAGAGTCGGTTTTTTTTCtt > 2:558369/1‑138 (MQ=255)
aaaaaTCAGCGCGGCGCTGCCGGGTTGCATTTGCTCTACCAGGGCCTGACGGCGACGCTGAAACTCTTGCCGGGATATATCACTCATAACACTCTCCTTACATTTTTTGTTTTTAGTGTAGAGTCGGGTTTTTTACtt > 3:31251/1‑138 (MQ=255)
cgcgGCGCTGCCGGGTTGCATTTGCTCTACCAGGGCCTGACGGCGACGCTGAAACTCTTGCCGGGATATATCACTCATAACACTCTCCTTACATTTTTTGTTTTTAGTGTAGAGTCGGGTTTTTTAATTATGGCGcggtg > 8:876648/1‑139 (MQ=255)
cgcgGCGCTGCCGGGTTGCATTTGCTCTACCAGGGCCTGACGGCGACGCTGAAACTCTTGCCGGGATATATCACTCATAACACTCTCCTTACATTTTTTGTTTTTAGTGTAGAGTCGGGTTTTGTACTTCTGGCGcgg > 1:921791/1‑138 (MQ=255)
cgcgGCGCTGCCGGGTTGCAATTGCTCTACCAGGGCCTGACGGCGACGCTGAAACTCTTGCCGGGATATATCACTCATAACACTCTCCTTACATTTTTTGTTTTTAGTGTAGAGTCGGTTTTTGTACTTCTGGCGcgg < 2:361354/138‑1 (MQ=255)
cggcgCTGCCGGGTTGCATTTGCTCTACCAGGGCCTGACGGCGACGCTGAAACTCTTGCCGGGATATATCACTCATAACACTCTCCTTACATTTTTTGTTTTTAGTGTAGAGTCGGTTTTTGTACTTCTGGCGcggtg > 4:733028/1‑137 (MQ=255)
tGCCGGGTTGCATTTGCTCTACCAGGGCCTGACGGCGACGCTGAAACTCTTGCCGGGATATATCACTCATAACACTCTCCTTACATTTTTTGTTTTTAGTGTAGAGTCGGTTTTTGTACTTCTGGCGCGGTCGGTTGc < 2:423338/138‑1 (MQ=255)
tGCCGGGTTGCATTTGCTCTACCAGGGCCTGACGGCGACGCTGAAACTCTTGCCGGGATATATCACTCATAACACTCTCCTTACATTTTTTGTTTTTAGTGTAGAGTCGGTTTTTGTACTTCTGGCGCGGTCGGTTGc < 5:406573/138‑1 (MQ=255)
tGCCGGGTTGCATTTGCTCTACCAGGGCCTGACGGCGACGCTGAAACTCTTGCCGGGATATATCACTCATAACACTCTCCTTACATTTTTTGTTTTTAGTGTAGAGTCGGTTTTTGTACTTCTGGCGCGGTCGGTTGCgg < 7:129773/140‑1 (MQ=255)
tGCCGGGTTGCATTTGCTCTACCAGGGCCTGACGGCGACGCTGAAACTCTTGCCGGGATATATCACTCATAACACTCTCCTTACATTTTTTGTTTTTAGTGTAGAGTCGGTTTTTGTACTTCTGGCGCGGTCGGTTGCgg < 7:73954/140‑1 (MQ=255)
tGCCGGGTTGCATTTGCTCTACCAGGGCCTGACGGCGACGCTGAAACTCTTGCAGGGATATATCACTCATAACACTCTCCTTACATTTTTTGTTTTTAGTGTAGAGTCGGTTTTTGTACTTCTGGCGCGGTCGGTTGc < 4:741747/138‑1 (MQ=255)
ggCCGGGTTGCATTTGCTCTACCAGGGCCTGACGGCGACGCTGAAACTCTTGCCGGGATATATCACTCATAACACTCTCCTTACATTTTTTGTTTTTAGTGTAGAGTCGGTTTTTGTACTTCTGGCGCGGTCGGTTGc < 5:209603/137‑1 (MQ=255)
ccGGGTTGCATTAGCTCTACCACGGCCTGACGGCGACGCTGAAACTCTTGCCGGGATATATCACTCATAACACTCTCCTTACATTTTTTGTTTTTAGTGTAGAGTCGGTTTTTGTACTTCTGGCGCGGTCGGGTGCgg < 6:322575/138‑1 (MQ=255)
gCATTTGCTCTACCAGGGCCTGACGGCGCCGCTGAAACTCTTGCCGGGATATATCACTCATAACACTCTCCTTACATTTTTTGTTTTTAGTGTAGAGTCGGGTTTTGTACATCTGGCGCGGTCGGTTGCGGATGAGtt > 2:859257/1‑137 (MQ=255)
cATTTGCTCTTCCAGGGCGTGACGGAGACGCTGAAACTGTTGCCGGGATATATCACTCATAACACTCTCCTTACATTTTTTGTTTTTAGTGTAGAGTCTGTTTTTGTACTTCTGGCGCGGTCGGTTGCGGATGAGTaa < 4:510601/138‑1 (MQ=255)
cATTTGCTCTACCAGGGCCTGACGGCGAAGCTGAAACTCTTGCCGGGATATATCACTCATAACACTCTCCTTACATTTTTTGTTTTTAGTGTAGAGGCGGGTTTTGTACTTCTGGCGCGGTCGGTAGCGGATGAGTaa < 5:87168/138‑1 (MQ=255)
ttctctACCAGGTGCTGACGGCGACGCGGAAACTCTTGCAGGGATATATCACTCATTACACTCTCCTTTCATTTTTTGTTTTTAGTGTATATTCGGTATTTGTACTTCTGGCGCTGTCGGATGCGGATGAGTAAAGgt < 2:965280/136‑1 (MQ=255)
tGCTCTACCAGGGCCTGACGGCGACGCTGAAACTCTTGCCGGGATATATCACTCATAACACTCTCCTTACATTTTTTGTTTTTAGTGTAGAGTCGGTTTTTGTACTTCTGGCGCGGTCGGTTGCGGATGAGTAAAGgtgt < 8:368300/140‑1 (MQ=255)
tGCTCTACCAGGGCCTGACGGCGACGCTGAAACTCTTGCCGGGATATATCACTCATAACACTCTCCTTACATTTTTTGTTTTTAGTGTAGAGTCGGTTTTTGTACTTCTGGCGCGGTCGGTTGCGGATGAGTAAAGgt < 2:928669/138‑1 (MQ=255)
tGCTCTACCAGGGCCTGACGGCGACGCTGAAACTCTTGCCGGGATATATCACTCATAACACTCTCCTTACATTTTTTGTTTTTAGTGTAGAGTCGGTTTTTGTACTTCTGGCGCGGTCGGTTGCGGATGAGTAAAGgt < 2:84925/138‑1 (MQ=255)
tGCTCTACCAGGGCCTGACGGCGACGCTGAAACTCTTGCCGGGATATATCACTCATAACACTCTCCTTACATTTTTTGTTTTTAGTGTAGAGTCGGTTTTTGTACTTCTGGCGCGGTCGGTTGCGGATGAGTAAAGgt < 2:752256/138‑1 (MQ=255)
tGCTCTACCAGGGCCTGACGGCGACGCTGAAACTCTTGCCGGGATATATCACTCATAACACTCTCCTTACATTTTTTGTTTTTAGTGTAGAGTCGGTTTTTGTACTTCTGGCGCGGTCGGTTGCGGATGAGTAAAGgt < 5:473533/138‑1 (MQ=255)
tGCTCTACCAGGGCCTGACGGCGACGCTGAAACTCTTGCCGGGATATATCACTCATAACACTCTCCTTACATTTTTTGTTTTTAGTGTAGAGTCGGTTTTTGTACTTCTGGCGCGGTCGGTTGCGGATGAGTAAAGgt < 2:208261/138‑1 (MQ=255)
tGCTCTACCAGGGCCTGACGGCGACGCTGAAACTCTTGCCGGGATATATCACTCATAACACTCTCCTTACATTTTTTGTTTTTAGTGTAGAGTCGGTTTTTGTACTTCTGGCGCGGTCGGTTGCGGATGAGTAAAGgt < 1:396059/138‑1 (MQ=255)
tGCTCTACCAGGGCCTGACGGCGACGCTGAAACTCTTGCCGGGATATATCACTCATAACACTCTCCTTACATTTTTTGTTTTTAGTGTAGAGGCGGTGTTTGTACTTCTGGCGCGGTCGGTTGCGGATGAGTAAAGgtgt < 8:691298/140‑1 (MQ=255)
tGCTCTACCAGGGCCTGACGGCGACGCTGAAACTCTTGCCGGGATATATAACTCATATCACTCTCCTTACATTTTTTGTTTTTAGTGTAGAGGCTGTTTTTGTACTTCTGGCGCGGTCGGGGGCGGATGAGTAAAGgtgt < 8:33132/140‑1 (MQ=255)
tGCTCTACCAGGGCCTGACGGCGACGCTGAAACTCTTGCCGGGATATAGCACTCATAACACTCTCCTTACATTTTTTGTTTTTAGTGTAGAGTCGGTTTTTGTACTTCTGGCGCGGTCGGTTGCGGATGAGTAAAGgt < 1:286517/138‑1 (MQ=255)
ctctACCAGGGCCTGACGGCGACGCTGAAACTCTTGCCGGGATATATCACTCATAACACTCTCCTTACATTTTTTGTTTTTAGTGTAGAGTCGGTTTTTGTACTTCTGGCGCGGTCGGTTGCGGATGAGTAAAGgtgt < 1:1004968/138‑1 (MQ=255)
ctctACCAGGGCCTGACGGCGACGCTGAAACTCTTGCCGGGATATATCACTCATAACACTCTCCTTACATTTTTTGTTTTTAGTGTAGAGTCGGTTTTTGTACTTCAGGCGCGGTCGGTTGCGGATGAGTAAAGgtgt < 6:188323/138‑1 (MQ=255)
ctctACCAGGGCCTGACGGAGACGATGAAAATCTTGCATGGATATATCACTCATAACACTCTCATTACATTTTTTGTTTTTAGTTTAGAGTCGGTTTTTGTACTTCTGGCGCGGTCGGTTGCGGATGATTAAAGgtgt < 1:145735/138‑1 (MQ=255)
aCCAGGGCCTGACGGCGACGCTGAAACTCTTGCCGGGATATATCACTCATAACACTCTCCTTACATTTTTTGTTTTTAGTGTAGAGTCGGTTTATGTACATATGGCGCGGTAGGTTTACGAGTAGTAAAGGTGTC‑GTggg > 7:448795/1‑139 (MQ=255)
cAGGGCCTGACGGCGACGCTGAAACTCTTGCCGGGATATATCACTCATAACACTCTCCTTACATTTTTTGTTTTTAGTGTAGAGTCGGTTTTTGTACTTCTGGCGCGGTCGGTTGCGGATGAGTAAAGGTGTC‑GTGGc > 4:367892/1‑138 (MQ=255)
aGGGCCTGACGGCGACGCTGAAACTCTTGCCGGGATATATCACTCATAACACTCTCCTTACATTTTTTGTTTTTAGGGTAGAGTCGGTTTTTGTACTTGTGGCGCGGGCGGGTGGCGCTGAGTAAAGGTGTC‑GTgggg > 4:713656/1‑136 (MQ=255)
ccTGACGGCGACGCTGAAACTCTTGCCGGGATATATCACTCATAACACTCTCCTTACATTTTTTGTTTTTAGTGTAGAGTCGGTTTTTGTACTTCTGGCGCGGTCGGTTGCGGATGAGTAAAGGTGTC‑GTGGCATAAc < 5:651398/138‑1 (MQ=255)
ccTGACGGCGACGCTGAAACTCTTGCCGGGATATATCACTCATAACACTCTCCTTACATTTTTTATTTTTAGTGTAGAGTCGGGTTTTGTTCTTATGGCGCGGTCGGGTGCGGATGCGGAAAGGTGTA‑GTgggctgac > 2:620872/1‑132 (MQ=255)
cTGACGGCGACGCTGAAACTCTTGCCGGGATATATCACTCATAACACTCTCCTTACATTTTTTGTTTTTAGTGTAGAGTCGGGTTTTGGAATTCTGGCGCGGTCGGGTGCGGATGAGGTAAGGTTGC‑GTGGCATAACa > 2:679955/1‑138 (MQ=255)
tGACGGCGACGCTGAAACTCTTGCCGGGATATATCACTCATAACACTCTCCTTACATTTTTTGTTTTTAGTGTAGAGTCGGTTTTTGTACTTCTGGCGCGGTCGGTTGCGGATGAGTAAAGGTGTC‑GTGGCATAACAg < 4:672667/138‑1 (MQ=255)
aCGGCGACGCTGAAACTCTTGCCGGGATATATCACTCATAACCCTCTCCTTACATTTTTTGTTGTTAGTGTAGAGTCGGGTTTTGTACTTATTGCGCGGGAGGTTGGGGGTGAGTAAAGGTGGG‑GTGGGATAACcgcggg > 8:739510/1‑138 (MQ=255)
aCGGCGACGCTGAAACTCTTGCCGGGATATATCACTCATAACACTCTCCTTACATTTTTTGTTTTTAGTGTAGAGTCGGGTTTTGTTCTGGTGGCGCGGGCGGTTTGGGTTGTGTTAAGGGGTG‑GGGGCATAAAcgcgcg > 7:442935/1‑140 (MQ=255)
aCGGCGACGCTGAAACTCTTGCCGGGATATATCACTCATAACACTCTCCTTACATTTTTTGTTTTTAGTGTAGAGTCGGGTGTTTTTCTTCTGGCGCGGGGGGTTGGGGGTGAGGAAATGTGGC‑GTGGGATAACcgcgcg > 7:710858/1‑140 (MQ=255)
cGGCGACGCTGAAACTCTTGCCGGGATATATCACTCATAACACTCTCCTTACATTTTTTGTTTTTAGTGTAGAGTCGGTTTTTGTACTTCTGGCGCGGTCGGTTGCGGATGAGTAAAGGTGTC‑GTGGCATAACAGCGCgg < 8:564410/140‑1 (MQ=255)
cGGCGACGCTGAAACTCTTGCAGGGATATATCACACCTAACACTCTCCATACATTTTTTGTTTTTAGTGTAGAGTCGGTTTTTGTAATTCTGGCGCGGTCGGTTGCGGATGAGTACAGGTGTC‑GTGGCATAACAgcgc < 4:655756/138‑1 (MQ=255)
ggCGACGCTGAAACTCTTGCCGGGATATATCACTCATAACACTCTCCTTACATTTTTTGTTTTTAGTGTAGAGTCGGTTTTTTTACTTCTGGCGCGGTCGGTTGGGGATGAGTTAATGTGTC‑GTGGCATAACAGcgcg > 4:374162/1‑138 (MQ=255)
ggCGAAGCTGAAACACTTGCCGGGATAAATCACTCATAACACTCTCCTTACATATTTTTGATTTAGTGTAGAGACGGCGTGTGTAATGATGGGCGGGGAGGATTCAGATGAGTAAAGGTGTA‑CTGGCCAAACAGagcg > 4:711570/1‑138 (MQ=255)
cGACGCTGAAACTCTTGCCGGGATATATCACTCATAACACTCTCCTTACATTTTTTGTTTTTAGTGTAGAGTCGGTTTTTTTACTTCTGGCGCGGTCGGTTGCGGTTGTGTAAATGTGTG‑GTGGCATAACAGCGCGGCaa > 7:786128/1‑140 (MQ=255)
cGACGCTGAAACTCTTGCCGGGATATATCACTCATAACACTCTCCTTACATTTTTTGTTTTTAGTGTAGAGTCGGGTTTTGGACTTCTGGCGCGGTCGGTTGCGGATGAGTAAAGGTGGC‑GTGGCATAACAGCGCGGCaa < 7:688703/140‑1 (MQ=255)
aCGCTGAAACTCTTGCCGGGATATATCACTCATATCACTCTCCTTACATTTTTTGTTTTTAGTGTAGAGTCGGTTTTTGTACTTCTGGCGCGGTCGGTTGCGGATGAGTAAAGGTGTC‑GTGGCATAACAGCGCGGCaa < 5:276018/138‑1 (MQ=255)
aCGCTGAAACTCTTGCCGGGATATATCACTCATAACACTCTCCTTACATTTTTTGTTTTTAGTGTAGAGTCGGTTTTTGTACTTCTGGCGCGGGCGGTTGCGGATGAGTAAAGGTGTC‑GTGGCATAACAGCGCGGCaa < 3:656479/138‑1 (MQ=255)
aCGCTGAAACTCTTGCCGGGATATATCACTCATAACACTCTCCTTACATTTTTTGTTTTTAGTGTAGAGTCGGGTTTTTTTCGTCTGGAGCGGGCGGTGGGGGGTGCGTTAAGGTGTG‑GTGGCTTAACATCCCGgcagca > 8:646024/1‑140 (MQ=255)
cGCTGAAACTCTTGCCGGGATATATCACTCATAACACTCTCCTTACATTTTTTGTTTTTAGTGTAGAGTCGGTTTTTGTACTTCTGGCGCGGGCGGGGGCGGATGAGTAAATGTGTC‑GTGGGCTAACAGCGCGGCAac > 2:267480/1‑138 (MQ=255)
cTGAAACTCTTGCCGGGATATATCACTCATAACACTCTCCTTACATTTTTTGTTTTTAGTGTAGAGTCGGTTTTTGTACTTCTGGCGCGGTCGGTTGCGGATGAGTAAAGGTGTC‑GTGGCATAACAGCGCGGCAacac < 4:995059/138‑1 (MQ=255)
cTGAAACTCTTGCCGGGATATATCACTCATAACACTCTCCTTACATTTTTTGTTTTTAGTGTAGAGTCGGTTTTTGTACTTCTGGCGCGGTCGGTTGCGGATGAGTAAAGGTGTC‑GTGGCATAACAGCGCGGCAacac < 6:506882/138‑1 (MQ=255)
atGAAACTCTTGCCGGGATATATCACTCATAACACTCTCCTTACATTTTTTGTTTTTAGTGTAGAGTCGGTTTTTGTACTTCTGGCGCGGTCGGTTGCGGATGAGTAAAGGTGTC‑GTGGCATAACAGCGCGGCAacac < 2:591166/137‑1 (MQ=255)
aCTCTTGCCGGGATATATCACTCATAACACTCTCCTTACATTTTTTGTTTTTAGTGTAGAGTCGGTTTTTGTACTTCTGGCGCGGTCGGTTGc < 3:8985/93‑1 (MQ=255)
aCTCTTGCCGGGATATATCACTCATAACACTCTCCTTACATTTTTTGTTTTTAGTGTAGAGTCGGTTTTTGTACTTCTGGCGCGGTCGGTTGc > 4:8985/1‑93 (MQ=255)
ctTGCCGGGATATATCACTCATAACACTCTCCTTACATTTTTTGTTTTTAGTGTAGAGTCGGTTTTTGTACTTCTGGCGCGGTCGGTTGCGGATGAGTAAAGgtgt < 7:885849/106‑1 (MQ=255)
ttGCCGGGATATATCACTCATAACACTCTCCTTACATTTTTTGGTTTTAGTGTAGAGTCGGTTTTTGTACTTCTGGCGCGGTCGGTTGCGGATGAGTAAAGGTGTC‑GTGGCATAACAGCGCGGCAACACGGACGTACTCg < 7:287205/140‑1 (MQ=255)
ttGCCGGGATATATCAATCATAACACTCTCCTTACTTTTTTTGTTTTTAGTGTATAGTAGGTTTTTTTAGTTATGGCGCGGTAGGTTGCGGGTTAGTAAATGTTTA‑GTGGCATAACAGCGCGGCCAAACGGACATaaacg > 8:701352/1‑136 (MQ=255)
gCCGGGATATATCACTCATAACACTCTCCTTACATTTTTTGTTTTTAGTGTAGAGTCGGTTTTTGTTATTCTTGCGCGGTCGGGTGCGGATTAGTTAAGGTGTC‑GTGGCCTAACAGCGCGGCACAACGGCCGGAATCg > 2:964323/1‑138 (MQ=255)
cTCATAACACTCTCCTTACATTTTTTGTTTTTAGTGTAGAGTCGGTTTTTGTACTTCTGGCGCGGGCGGTTGCGGATGAGTAAAGGTGGC‑GTGGCATAACAGCGCGGCAACACGGACGTACTCGATGATCTCTTCAAg < 4:342754/138‑1 (MQ=255)
tCATAACACTCTCCTTACATTTTTTGTATTTAGTGTAGAGTCGGTTTTTGTACTTCTTGCGCGGGCGGTTGCGGATGAGTAAAGGTGTC‑GTGGCATAACAGCGCGGCAACACGGACGTACTCGATGATCTCTTCAAGCGa < 8:72359/140‑1 (MQ=255)
tCATAACACTCTCATTACATTTTTTGTTTTTAGTGTAGAGTCGGTTTTTGTACTTCTGGCGCGGTCGGTTGCGGATGAGTAAAGGTGGC‑GTGGCATAACAGCGCGGCAACACGTACGTACTCGATGATCTCTTCAAGc < 6:484813/138‑1 (MQ=255)
cATAACACTCTCCTTACATTTTTTGTTTTTAGTGTAGAGTCGGGTTTTGTTCTTATGGCGCGGTCGGTTGGGGATGAGTAAAGGTGTC‑GTGGCAAAACAGCGCGGCAACCCCGACGTACACGATTATGTCTTCAAGCGAc > 7:90873/1‑140 (MQ=255)
aTAACACTCTCCTTACATTTTTTGTTTTTAGTGTAGAGTCGGTTTTTGTTCTTCTGGCGCGGTCGGTTGCGGGTGATTTAAGGTTTCTGTGG‑ATAAAAGAGCGGCAACACCGCCGTACTAGATGATCTCTTCAACCgccc > 8:630274/1‑137 (MQ=255)
tAACACTCTCCTTACATTTTTTGTTTTTAGTGTAGAGTCGGGTTTTGTTCTTCTGGCGCGGGCGGGTGCGGATGAGTAAAGGTGTC‑GTGGCCAAACCCCGCGGCAAACCGGCCGGACTAGATGATCTCTTCAAGCGAc > 6:288761/1‑138 (MQ=255)
aaCACTCTCCTTACATTTTTTGTTTTTAGTGTAGAGTCGGTTTTTTTACTTCTGGCGCGGGCGGGTGGGGCTGAGTAAAGGTGTA‑GTGGCATAACAGCGCGGCAACACGGACGTTCTCGATTATCTCGTCAAGCGCCa > 4:362521/1‑138 (MQ=255)
acacTCTCCTTACATTTTTTGTTTTTAGTGTAGAGTCGGTTTTTGTACTTCTGGCGCGGACGGTTGCGGATGAGTAAAGGTGTC‑GTGGCATAACAGCGCGGCAACACGGACGTACTCGATGATCTCTTCAAGCGACAt < 1:984244/138‑1 (MQ=255)
cacTCTCCTTACATTTTTTGTTTTTAGTGTAGAGTCGGTTTTTGTACTTCTGGCGCGGTCGGTTGCGGATGAGTAAAGGTGTC‑GTGGCATAACAGCGCGGCAACACGGACGTACTCGATGATCTCTTCAAGCGACAtt < 3:367892/138‑1 (MQ=255)
tctcCTTACATTTTTTGTTTTTAGTGTAGAGTCGGGTTTTGTACTTCTGGCCCGGTCGGTAGCGGAAGAGGAAAGGATTC‑GTGCCGTAACAGCGCGGCCACAAGGAAGGCAAAGATGATAACTTCAAGCGACAGTTCaac > 8:488326/1‑139 (MQ=255)
ctcCTTACATTTTTTGTTTTTAGTGTAGAGTCGGTTTTTGTACTTCTGGCGCGGTCGGTTGCGGATGAGTACAGGTGGC‑GTGGCTTATCAGCGCGGCAACACGGACGTACTCGATGATCTCTTCAAGCGACATTTCaa < 2:196287/138‑1 (MQ=255)
ctcCTTACATTTTTTGTTTTTAGTGTAGAGTCGGTTTTTGTACTTCTGGCGCGGTCGGTTGCGGATGAGTAAAGGTGTC‑GTGGCATAACAGCGCGGCAACACGGACGTACTCGATGATCTCTTCAAGCGACATTTCaa < 4:55202/138‑1 (MQ=255)
ctcCTTACATTTTTTGTTTTTAGTGTAGAGTCGGTTTTTGTACTTCTGGCGCGGTCGGTTGCGGATGAGTAAAGGTGTC‑GTGGCATAACAGCGCGGCAACACGGACGTACTCGATGATCTCTTCAAGCGACATTTCaa < 4:318495/138‑1 (MQ=255)
ctcCTTACATTTTTTGTTTTTAGTGTAGAGTCGGTTTTTGTACTTCTGGCGCGGTCGGTTGCGGATGAGTAAAGGTGGC‑GTGGCATAACAGCGCGGCAACACGGACGTACTCGATGATCTCTTCAAGCGACATTTCaa < 1:424514/138‑1 (MQ=255)
ctcCTTACATTTTTTGTTTTTAGTGTAGAGTCGGTTTTTGTACTTCTGGCGCGGGCGGTTGCGGATGAGTAAAGGTGTC‑GTGGCATAACAGCGCGGCAACACGGACGTACTCGATGATCTCTTCAAGCGACATTTCAAGc < 7:190464/140‑1 (MQ=255)
ctcCTTACATTTTTTGTTTTTAGTGTAGAGTCGGTTTTTGTACTTCTGGCGCGGGCGGTTGCGGATGAGTAAAGGGGTC‑GTGGCATAACAGCGCGGCAACACGGACGTACTCGATGATCTCTTCAAGCGACATTTCaa < 3:214259/138‑1 (MQ=255)
ctcCTTACATTTTTTGTTTTTAGTGTAGAGTCGGGTTTTGTAGTTATGGGGCGGTCGGTTGCGGATGAGTAAAGGTGTA‑GTGGCATAACAGCGCGGCAACACCGACGTACTCGATGTACTCTTAAAGCCACCTTTCAAGc > 8:670246/1‑140 (MQ=255)
ccTTACATTTTTTGTTTTTAGTGTAGAGTCGGTTTTTGTTCATAAGGCGCGGTAGGTTGCTGATGTCTAAATGTGTC‑GTTGCATAACATCGCCGCAAAACGGACGTAAAAGAAGATCACTTCAAACGACAATTAAAGc > 6:663521/1‑138 (MQ=255)
ccTTACATTTTTTGTTTTTAGTGTAGAGTCGGTTTTTGTACTTATGGCGCGGTGGGTTGCGGATGAGTAAAGGTGTC‑GTGGGATAACAGCGCGGGAACACCGACCTACTCGATGATCTCTTAAAGCGACCTTTCAAGc > 6:799440/1‑138 (MQ=255)
ccTTACATTTTTTGTTTTTAGTGTAGAGTCGGTTTTTGTAATTGATGCGGTGTCGGTTGCGGATTAGTAAAGGTGTC‑GTGGCATAACACCGCGGCCACACGGACGTACTCGATGGTCACTTAAAGCGACATTTAAAGc > 5:453268/1‑138 (MQ=255)
ccTTACATTTTTTGTTTTTAGTGTAGAGTCGGGTTTTTTAATTATGGCGCGGGCGGTTGAGGTTGAGTAAAAGTGTC‑GTTGGATAAAACCGCCGCAACACCGCCCGAATCCATTATCTCATAAAGCCACAATTAAAGc > 3:960063/1‑138 (MQ=255)
ccTTACATTTTTTGTTTTTAGTGTAGAGTCGGGTTTTGTTCTTATGGCGCGGTCGGGTGCGGATGAGGAAATGGGTC‑GTGGGATAACAGCGCGGGCACACGGCCGTTCTCGATGATGTCTTCAAGCGACATTTCAAGc > 6:791561/1‑138 (MQ=255)
ccTTACATTTTTTGTTTTTAGTGTAGAGTCGGGTTTTGTAAATCTGGCGCGGTCGGTTGGGGATGAGTAAAGGTGTG‑GGGGCATAACATCGCGGCAACACGGACGGACAGGAAGATCAATTCAAGCCACATTTGAAGc > 3:222834/1‑138 (MQ=255)
ccTTACATATTTTGTTTTTAGTGTAGAGTCGGGTGTTGTACTTCTGGCGCGGGCGGGTGGGGATGACTAAAGGTGTA‑GGGGCATAAACGCGCGGCAACCCCGACGGAGTCGAGGAGCACATCAAGCGACCTATCAAGc > 6:650332/1‑138 (MQ=255)
aTTTTTTGTTTTTAGTGTAGAGTCGGTTTTTGTAATTATGGCGCGGGCGGTTGAGGATGAGGAAAGGTGTC‑GTGGCATAAAAGCGCGGCAACAAGGAGGTGCACGGTGATGTAGTGAAGCGACATTTAAAGCTCTTcc > 6:480298/1‑138 (MQ=255)
aTTTTTTGTTTTTAGTGTAGAGTCGGTTGTTGTACTTATTGAGCAGTATGGTTCGTAAGAGTAAAGGATTC‑AGGGCATAACAACGAGGCGAAAAAGAAGGAATGCAGGAACACTTCAAGCGACAATTCAAGcactgactg > 8:880287/1‑135 (MQ=255)
aTTTTTTGATTATAGTGTAGAGTCGGTTTTTGTACATCTGGCGCGGTCGGTTGCGGATGAGTAAAGGTGGC‑GTGGCATAACAGCGCGGCAACACGGACGTACTAGATGATCTCTTCAAGCGACATTTCAAGCTCTTcc < 3:757557/138‑1 (MQ=255)
ttGTTTTTAGTGTAGAGTCGGTTTTTGTACTTCTGGCGCGGTCGGTTGCGGATGAGTAAAGGTGTC‑GTGGCATAACAGCGCGGCAACACGGACGTACTCGATGATCTCTTCAAGCGACATTTCAAGCTCTTCCTGAtc < 5:356314/138‑1 (MQ=255)
gtgtAGAGTCGGTTTTTGTACTTCTGGCGCGGTCGGTTGCGGATGAGTAAAGGTGTC‑GTGGCATAACAGCGCGGCAACACGGACGTACTCGATGATCTCTTCAAGCGACATTTCAAGCTCTTCCTGAtcttcgtcttc < 3:811914/138‑1 (MQ=255)
gtAGAGTCGGTTTTTGTACTTCTGGCGCGGTCGGTTGCGGATGAGTAAAGGTGTC‑GTGGCATAACAGCGCGGCAACACGGACGTACTCGATGATCTCTTCAAGCGACATTTCAAGCTCTTCCTGATcttcgtcttcgt < 3:735247/138‑1 (MQ=255)
ggTTTTTGTACTTCTGGCGCGGTCGGTTGCGGATGAGTAAAGGTGTC‑GTGGCATAACAGCGCGGCAACACGGACGTACTCGATGATCTCTTCAAGCGACATTTCAAGCTCTTCCTGATCTTCGTCTTCGTCGTAAccc < 5:900191/138‑1 (MQ=255)
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CTGGTGCAGCAAAAATCAGCGCGGCGCTGCCGGGTTGCATTTGCTCTACCAGGGCCTGACGGCGACGCTGAAACTCTTGCCGGGATATATCACTCATAACACTCTCCTTACATTTTTTGTTTTTAGTGTAGAGTCGGTTTTTGTACTTCTGGCGCGGTCGGTTGCGGATGAGTAAAGGTGTC‑GTGGCATAACAGCGCGGCAACACGGACGTACTCGATGATCTCTTCAAGCGACATTTCAAGCTCTTCCTGATCTTCGTCTTCGTCGTAACCC > NZ_CP022686/1674087‑1674359
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| Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
N/A
