Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A9 F13 I0 R1
|
203 |
11425.2 |
8793538 |
98.4% |
8652841 |
135.9 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
freq |
annotation |
gene |
description |
| RA |
NZ_CP022686 |
1,674,224 |
T→G |
12.2% |
K188N (AAA→AAC) |
ygfB ← |
UPF0149 family protein YgfB |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NZ_CP022686 | 1,674,224 | 0 | T | G | 12.2%
| 317.0
/ 8.4
| 169 | K188N (AAA→AAC) | ygfB | UPF0149 family protein YgfB |
| Reads supporting (aligned to +/- strand): ref base T (31/112); new base G (22/3); total (54/115) |
| Fisher's exact test for biased strand distribution p-value = 2.80e-10 |
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 |
Only 100 of 181 total aligned reads displayed.
CTGGTGCAGCAAAAATCAGCGCGGCGCTGCCGGGTTGCATTTGCTCTACCAGGGCCTGACGGCGACGCTGAAACTCTTGCCGGGATATATCACTCATAACACTCTCCTTACATTTTTTGTTTTTAGTGTAGAGTCGGTTTTTGTACTTCTGGCGCGGTCGGTTGCGGATGAGTAAAGGTGTCGT‑GGCATAACAGCGCGGCAACACGGACGTACTCGATGATCTCTTCAAGCGACATTTCAAGCTCTTCCTGATCTTCGTCTTCGTCGTAACCCAA > NZ_CP022686/1674087‑1674361
|
cTGGTGCAGCAAAAATCAGCGCGGCGCTGCCGGGTTGCATTTGCTCTACCAGGGCCTGACGGCGACGCTGAAACTCTTGCCGGGATATATCACTCATAACACTCTCCTTACATTTTTTGTTTTTATTGTAGAGTCGGgtt > 2:449220/1‑140 (MQ=255)
cTGGTGCAGCAAAAATCAGCGCGGCGCTGCCGGGTTGCATTTGCTCTACCAGGGCCTGACGGCGACGCTGAAACTCTTGCCGGGATATATCACTCATAACACTCTCCTTACATTTTTTGTTTTTAGTGTAGAGTCGGttt > 6:854966/1‑140 (MQ=255)
cTGGTGCAGCAAAAATCAGCGCGGCGCTGCCGGGTTGCATTTGCTCTACCAGGGCCTGACGGCGACGCTGAAACTCTTGCCGGGATATATCACTCATAACACTCTCCTTACATTTTTTGTTTTTAGTGTAGAGTCGGgtt > 8:634698/1‑140 (MQ=255)
tGGTGCAGCAAAAATCAGCGCGGCGCTGCCGGGTTTCATTTGCTCTACCAGGGCCAGACGGCGACGCTGAAACTATAGCCGGTATATATCAATCATAACAATCTCCTTACATATTTTGTTTTTAGTGTAGAGTAGGtttt > 5:1053843/1‑140 (MQ=255)
ggTGCAGCAAAAATCAGCGCGGCGCTGCCGGGTTGCATTTGCTCTACCAGGGCCTGACGGCGACGCTGCAACTCTTGCCGGGATATATCCCTCATAACACTCTCCTTACATTTTTTGTTTTTAGTGTAGAGTCGGgttgt > 7:6153/1‑138 (MQ=255)
ggTGCAGCAAAAATCAGCGCGGCGCTGCCGGGTTGCATTTGCTCTACCAGGGCCTGACGGCGACGCTGAAACTCTTGCCGTGATATATCACTCATAACACTCTCCTTACATTTTTTGTTTTTAGTGTAGAGTCGGgtttt > 2:644554/1‑140 (MQ=255)
ggTGCAGCAAAAATCAGCGCGGCGCTGCCGGGTTGCATTTGCTCTACCAGGGCCTGACGGCGACGCTGAAACTCTTGCCGGGATATATCACTCATAACACTCTCCTTACATTTTTTGTTTTTAGTGTAGAGTCGGttt > 3:577773/1‑138 (MQ=255)
ggTGCAGCAAAAATCAGCGCGGCGCTGCCGGGTTGCATTTGCTCTACCAGGGCCTGACGGCGACGCTGAAACTCTTGCCGGGATATATCACTAATAACACTCTCCTTACATTTTTTGTATTTAGTGTAGAGTCGGgtt > 3:694300/1‑138 (MQ=255)
ggTGCAGCAAAAATCAGCGCGGCGCTCCCGGGTTGCATTTGCTCTACCAGGGCCTGACGGCGACCCTGAAACTCTTGCCGGGATATATCACTCATAACACTCTCCTTACATTTTTTGTTTTTAGTGTAGAGTCGGgtttt > 1:667206/1‑140 (MQ=255)
gTGCAGCAAAAATCAGCGCGGCGCTGCCGGGTTGCATTTGCTCTACCAGGGCCTGACGGCGACGCTGAAACTCTTGCCGGGATATATCACTCATAACACTCTCCTTACATTTTTTGTTTTTAGTGTAGAGTCGGtttttt > 6:956720/1‑139 (MQ=255)
gTGCAGCAAAAATCAGCGCGGCGCTGCCGGGTTGCATTTGCTCTACCAGGGCCTGACGGCGACGCTGAAACTCTTGCCGGGATATATCACTCATAACACTCTCCTTACATTTTTTGTTTTTAGTGTAGAGTCGGTTTTTg < 1:58849/140‑1 (MQ=255)
gTGCAGCAAAAATCAGAGCGGCGCTGCCGGGTTGCATTTGCTCAACCAGGGCCTGACGGCGTCGCTGAACATCTTGCCGGGATATATCACTCATAACACTCTCCTTACATTTTTTGTTTTTAGTGTAGAGTCGGTTTTTg < 1:807993/140‑1 (MQ=255)
gcaAAAATCAGCGCGGCGCTGCCGGGTTGCATTTGCTCTACCAGGGCCTGACGGCGACGCTGAAACTCTTGCCGGGATATATCACTCATAACACTCTCCTTACATTTTTTGTTTTTAGTGTAGAGTCGGTTTTTGTTCtt > 5:731538/1‑140 (MQ=255)
gcaAAAATCAGCGCGGCGCTGCCGGGTTGCATTTGCTCTACCAGGGCCTGACGGCGACGCTGAAACTCTTGCCGGGATATATCACTCATAACACTCTCCTTACATTTTTTGTTTTTAGTGTAGAGTCGGGTTTTGTACtt > 8:517643/1‑140 (MQ=255)
aTCAGCGCGGCGCTGCCGGGTTGCATTTGCTCTACCAGGGCCTGACGGCGACGCTGAAACTCTTGCCGGGATATATCACTCATAACACTCTCCTTACATTTTTTGTTTTTAGTGTAGAGTCGGTTTTTGTACTTCTGgcg < 2:728860/140‑1 (MQ=255)
cgcgcGGCGCTGCCGGGTTGCATTTGCTCTACCAGGGCCTGACGGCGACGCTGAAACTCTTGCCGGGATATATCACTCATAACACTCTCCTTACATTTTTTGTTTTTAGTGTAGAGTCGGTTTTTGTACTTCTGgcgc < 4:984185/137‑1 (MQ=255)
gcgcGGCGCTGCCGGGTTGCATTTGCTCTACCAGGGCCTGACGGCGACGCTGAAACTCTTGCCGGGATATATCACTCATAACACTCTCCTTACATTTTTTGTTTTTAGTGTAGAGTCGGTTTTTGTACTTCTGGcgcg < 4:435017/138‑1 (MQ=255)
cgcgGCGCTGCCGGGTTGCATTTGCTCTACCAGGGCCTGACGGCGACGCTGAAACTCTTGCCGGGATATATCACTCATACCACTCTCCTTACATTTTTTGTTTTTAGTGTAGAGGCGGTTTTTGTTCGTCGGGCGcgggg > 1:419339/1‑138 (MQ=255)
cggcgCTGCCGGGTTGCATTTGCTCTACCAAGGCCTGACGGCGACGCTGAAACTCTTGCCGGGATATATCACTCATAACACTCTCCTTACATTTTTTGTTTTTAGTGTAGAGTCGGGTTTTGTTCTTGTTGGGcggtg > 3:175809/1‑137 (MQ=255)
ctcTGCCGGGTTGCATTTGCTCTACCAGGGCCTGACGGCGACGCTGAAACTCTTGCCGGGATATATCACTCATAACACTCTCCTTACATTTTTTGTTTTTAGTGTAGAGTCGGTTTTTGTACTTCTGGCGCGGTCGGTTg < 7:724045/138‑1 (MQ=255)
cgcTGCCGGGTTGCATTTGCTCTACCAGGGCCTGACGGCGACGCTGAAACTCTTGCCGGGATATATCACTCATAACACTCTCCTTACATTTTTTGTTTTTAGTGTAGAGTCGGTTTTTGTACTTCTGGCGCGGTCGGTTg < 5:148426/140‑1 (MQ=255)
ttccGGGTTGAATTTGCTCTACCAGGGCCAGACGGCGACGCTGAAACTCTTGCCGGGATATATCACTCATAACACTCTCCTTACATTTTTTGTTTTTAGTGTAGAGTCGGTTTTTGTCCTTCTGGCGCGGTCGGTAGCgg < 5:995847/138‑1 (MQ=255)
tGCCGGGTTGCATTTGCTCTACCAGGGCCTGACGGCGACGCTGAAACTCTTGCCGGGATATATCACTCATAACACTCTCCTTACATTTTTTGTTTTTAGTGTAGAGTCGGTTTTTGTACTTCTGGCGCGTTCGGTTGCgg < 2:379266/140‑1 (MQ=255)
tGCCGGGTTGCATTTGCTCTACCAGGGCCTGACGGCGACGCTGAAACTCTTGCCGGGATATATCACTCATAACACTCTCCTTACATTTTTTGTTTTTAGTGTAGAGTCGGTTTTTGTACTTCTGGCGCGGTCGGTTGc < 3:691123/138‑1 (MQ=255)
tGCCGGGTTGCATTTGCTCTACCAGGGCCTGACGGCGACGCTGAAACTCTTGCCGGGATATATCACTCATAACACTCTCCTTACATTTTTTGTTTTTAGTGTAGAGTCGGTTTTTGTACTTCTGGCGCGGTCGGTTGCgg < 5:341636/140‑1 (MQ=255)
tGCCGGGTTGCATTTGCTCTACCAGGGCCTGACGGCGACGCTGAAACTCTTGCCGGGATATATCACTCATAACACTCTCCTTACATTTTTTGTTTTTAGTGTAGAGTCGGTTTTTGTACTTCTGGCGCGGTCGGTTGCgg < 5:946378/140‑1 (MQ=255)
gggcGGGTTGCATTTGCTCTACCAGGGCCTGACTGCGACGCTGAAACTCTTGCCGGGATATATCACTCATCACACTCTCCTTACATTTTTTGGTTTTAGTGTAGAGTCGGTTTTTGTACTTCTGGCGCGGTCGGTTGCgg < 7:443661/137‑1 (MQ=255)
ccGGGTTGCATTTGCTCTACCAGGGCCTGACGGCGACGCTGAAACTCTTGCCGGGATATATCACTCATAACACTCTCCTTACATTTTTTGTTTTTAGTGTAGAGTCGGTTTTTGTACTTCTGGCGCGGTCGGTTGCGGAt < 5:295387/140‑1 (MQ=255)
ccGGGTTGCATTTGCTCTACCAGGGCCTGACGGCGACGCTGAAACTCTTGCCGGGATATATCACTCATAACACTCTCCTTACATTTTTTGTTTTTAGTGTAGAGTCGGTTTTTGTACTTCTGGCGCGGTCGGTTGCGGAt < 8:920861/140‑1 (MQ=255)
ttGCATTTGCTCTACCAGGGCCTGACGGCGACGCTGAAACTCTTGCCGGGATATATCACTCATAACACTCTCCTTACATTTTTTGTTTTTAGTGTAGAGTCGGTTTTTGTACTTCTGGCGCGGTCGGTTGCGGATGAGTa < 6:913627/140‑1 (MQ=255)
ttGCATTTGCTCTACCAGGGCCTGACGGCGACGCTGAAACTCTTGCCGGGATATATCACTCATAACACTCTCCTTACAGTTTTTGTTTTTAGTGTAGAGTCGGGTGTTTTTCTTGTGGCGCGGGCGGGGGCGGCTGAggt > 1:1078709/1‑138 (MQ=255)
ttGCATTTGCTCTACCAGGGCCTGACGGAGACGCTGAAACTCTTGCCGGGATATATCACTCATAACACTCTCCTTACATTTTTTGTTTTTAGTGTAGAGTCGGTTTTTGTACTTATGGCCCGGTAGGTTGCGGGTGAGTa > 8:237352/1‑140 (MQ=255)
gCATTTGCTCTACCAGGGCCTGACGGCGACGCTGAAACTCTTGCCGGGATATATCACTCATAACACTCTCCTTACATTTTTTGTTTTTAGTGTAGAGTCGGGTTTTGTTGTTAGTGGGCGGGGGGTTGGGGATGAGtt > 4:1104287/1‑137 (MQ=255)
gCATTTGCTCTACCAGGGCCTAACGGCGACGCTGAAACTCTTGCCGGGATATATCACTCATAACACTCTCCTTACATTTTTTGTTTTTAGTGTAGAGTCGGTTTTTGTACTTCTGGCGCGGTCGGTTGCGGATGAGTa < 3:216119/138‑1 (MQ=255)
tGCTCTACCAGGGCCTGACGGCGACGCTGAAACTCTTGCCGGGATATATCACTCATAACACTCTCCTTACATTTTTTGTTTTTAGTGTAGAGTCGGTTTTTGTACTTCTGGCGCGGTCGGTTGCGGATGAGTAAAGgtgt < 1:647079/140‑1 (MQ=255)
tGCTCTACCAGGGCCTGACGGCGACGCTGAAACTCTTGCCGGGATATATCACTCATAACACTCTCCTTACATTTTTTGTTTTTAGTGTAGAGTCGGTTTTTGTACTTCTGGCGCGGTCGGTTGCGGATGAGTAAAGgtgt < 2:225027/140‑1 (MQ=255)
tGCTCTACCAGGGCCTGACGGCGACGCTGAAACTCTTGCCGGGATATATCACTCATAACACTCTCCTTACATTTTTTGTTTTTAGTGTAGAGTCGGTTTTTGTACTTCTGGCGCGGTCGGTTGCGGATGAGTAAAGgtgt < 1:384058/140‑1 (MQ=255)
tGCTCTACCAGGGCCTGACGGCGACGCTGAAACTCTTGCCGGGATATATCACTCATAACACTCTCCTTACATTTTTTGTTTTTAGTGTAGAGTCGGTTTTTGTACTTCTGGCGCGGTCGGTTGCGGATGAGTAAAGgt < 3:256718/138‑1 (MQ=255)
ttctACCAGGGCCTGACGGCGACTCTGAAACTCTTGCCGGGATATATCACTCATAACACTCTCCTTACATTTTTTGTTTTTAGTGTAGAGTCGGGTTTTGTACTTCTGGCGCGGTCGGTGGCGGATGAGTAAAGGTGTCg < 2:667206/139‑1 (MQ=255)
ctctACCAGGGCCTGACGGCGACGCTGAAACTCTTGCCGGGATATATCACTCATAACACTCTCCTTACATTTTTTTTTTTTAGTGTAGAGTCGGTTTTTGTACTTCTGGCGCGGTCGGTTGCGGATGAGTAAAGGTGTCg < 6:228221/140‑1 (MQ=255)
ctctACCAGGGCCTGACGGCGACGCTGAAACTCTTGCCGGGATATATCACTCATAACACTCTCCTTACATTTTTTGTTTTTAGTGTAGAGTCGGTTTTTGTACTTCTGGCGCGGTCGGTTGCGGATTAGTAAAGGTGTCg < 2:142147/140‑1 (MQ=255)
ctctACCAGGGCCTGACGGCGACGCTGAAACTCTTGCCGGGATATATCACTCATAACACTCTCCTTACATTTTTTGTTTTTAGTGTAGAGTCGGTTTTTGTACTTCTGGCGCGGTCGGTTGCGGATGAGTAAAGGTGTCg < 8:724651/140‑1 (MQ=255)
ctctACCAGGGCCTGACGGCGACGCTGAAACTCTTGCCGGGATATATCACTCATAACACTCTCCTTACATTTTTTGTTTTTAGTGTAGAGTCGGTTTTTGTACTTCTGGCGCGGTCGGTTGCGGATGAGTAAAGGTGTCg < 2:232679/140‑1 (MQ=255)
aCCAGGGCCTGACGGCGACGCTGAAACTCTTGCCGGGATATATCACTCATAACACTCTCCTTACATTTTTTGTTTTTAGTGTAGAGTCGGTTTTTGTTCATCTGGCGCGGTCGGTTGCGGATGAGTAAATGTGTCGT‑GGc > 8:502874/1‑140 (MQ=255)
aCCAGGGCCTGACGGCGACGCTGAAACTCTTGCCGGGATATATCACTCATAACACTCTCCTTACATTTTTTGTTTTTAGTGTAGAGTCGGTTTTTGTACTTGTTGCGCGGGCGGTTGCGGATGAGTAAAGGTGTCGT‑gtg > 2:702226/1‑138 (MQ=255)
aCCACGGCCTGACGGCGACGCTGAAACTCTTGCCGGGATATATCACTCATAACACTCTCCGTACAGTTTTTGTTTTTAGTGTAGAGTCGCTTTTTGTAAGTAAGGCGCGGGCGGTTGCGGATGAGTAAAGGTTTCgggcc > 7:243786/1‑136 (MQ=255)
gcatGACGGCGACGCTGAAACTCTTGCCGGGATATATCACTCATAACACTCTCCTTACAGTTTTAGTTTTTAGTGTAGCGTCGGGTTTTTTACTTGGGGCGCGGGCGGTGGCGGTGGAGTAAATGTGGCGT‑GGGATTAcc > 1:999220/4‑139 (MQ=255)
gCCTGACGGCGACGCTGAATCTCTTGCCGGGATATATCACTCATAACACTCTCCTGACATTTTTTGTTTTTAGTGTAGAGTCGGGGTTTGGCCGTAGGGCGGGGTCCTGTGGGGATTAGTTAAGGTGTCGT‑TGccttccc > 5:102293/1‑134 (MQ=255)
gCCTGACGGCGACGCTGAAACTCTTGCCGGGATATATCACTCATAACACTCTCATTACATTTTTTGTTTTTAGTGTAGAGTCGGTTTTTGTAATTCTGGGGCGGTGGGTTGCGGATGAGTAAAGGTTTCGT‑TGCATaaaa > 2:613414/1‑138 (MQ=255)
gACGGCGACGCTGAAACTCTTGCCGGGATATATCACTCATAACACTCTCCTTACATTTTTTGTTTTTAGTGTAGAGTCTGTTTTTGTACTTCTGGCGCGGTCGGTTGCGGATGAGTAAAGGTGTCGT‑GGCATAACAgcgc < 6:653110/140‑1 (MQ=255)
aCGGCGACGCTGAAACTCTTGCCGGGATATATCACTCATAACACTCTCCTTACATTTTTTGTTTTTAGTGTAGAGTCGGGTTTTTTGCTTATGGGGCGGGGGGTTGGGGGTGAGTTAAGGGTTCGT‑GGGATAACAGcgcg > 6:397434/1‑140 (MQ=255)
aCGGCGACGCTGAAACTCTTGCAGGGATATATCACTCATAACACTCTCCTTACATTTTTTGTTTTTAGTGTAGAGTCGGGTTTTGTACTTGTGGGGCGGGCGGTTGCGGATGAGTAAAGGGGTCGT‑GGCATAAAAgcg > 4:1055285/1‑138 (MQ=255)
cGGCGACGCTGAAACTCTTGCCGGGATATATCACTCATAACACTCTCCTTACATTTTTTGTTTTTAGTGTAGAGTCGGTTTTTGTACTTCTGGCGCGGTCGGTTGCGGATGAGTAAAGGTGTCGT‑GGCATAACAGCGCgg < 5:854966/140‑1 (MQ=255)
cGGCGACGCTGAAACTCTTGCCGGGATATATCACTCATAACACTCTCCTTACATTTTTTGTTTTTAGTGTAGAGTCGGTTTTTGTACTTCTGGCGCGGTCGGTTGCGGATGAGTAAAGGTGTCGT‑GGCATAACAGCGCgg < 6:1047696/140‑1 (MQ=255)
cGACGCTGAAACTCTTGCCGGGATATATCACTCATAACACTCTCCTTACATTTTTTGTTTTTAGTGTAGAGTCGGTTTTTGTACTTCTGGCGCGGTCGGTTGCGGATGAGTAAAGGTGTCGT‑GGCATAACAGCGCGGCaa < 7:185052/140‑1 (MQ=255)
tcGCTGAAACTCTTGCCGGGATATATCACTCATAACACTCTCCTTACATTTTTTGTTTTTAGTGTAGAGTCGGTTTTTGTACTTCTGGCGCGGTCGGTTGCGGATGAGTAAAGGTGTCGT‑GGCATAACAGCGCGGCAaca < 2:911816/139‑1 (MQ=255)
aCGCTGATACTCTTGCCGGGATATATCACTCATAAAACTCTCCTTACATTTTTTGTTTTTAGTGTAGAGTCGGTTTTTGTACTTCTGGCGCGGTCGGTTGCGGATGAGTAAAGGTGTCGT‑GGCATAACAGCGCGGCAaca < 1:61198/140‑1 (MQ=255)
aCGCTGAAACTCTTGCCGTGAAATATCACTCATAACACTCTCCTTTCATTTTTTGTTTTTAGTGTAGAGTCGGTTTTTGTACTTCTGGCGCGGTCGGTTGCGGATGAGTAAAGGTGTCGT‑GGCATAACAGCGCGGCaa < 4:1010846/138‑1 (MQ=255)
aCGCTGAAACTCTTGCCGGGATATATCACTCATAACACTCTCCTTACATTTTTTGTTTTTAGTGTAGAGTCGGTTTTTGTACTTCTGGCGCGGTCGGTTGCGGATGAGTATAGGTGTCGT‑GGCATAACAGCGCGGCAaca < 5:118684/140‑1 (MQ=255)
aCGCTGAAACTCTTGCCGGGATATATCACTCATAACACTCTCCTTACATTTTTTGTTTTTAGTGTAGAGTCGGTTTTTGTACTTCTGGCGCGGTCGGTTGCGGATGAGTAAAGGTGTCGT‑GGCATAACAGCGCGGCaa < 3:1104287/138‑1 (MQ=255)
aCGCTGAAACTCTTGCCGGGATATATCACTCATAACACTCTCCTTACATTTTTTGTTTTTAGTGTAGAGTCGGTTTTTGTACTTCTGGCGCGGTCGGTTGCGGATGAGTAAAGGTGTCGT‑GGCATAACAGCGCGGCAaca < 7:259705/140‑1 (MQ=255)
aCGCTGAAACTCTTGCCGGGATATATCACTCATAACACTCTCCTTACATTTTTTGTTTTTAGTGTAGAGTCGGTTTTTGTACTTCTGGCGCGGTCGGTTGCGGATGAGTAAAGGTGGCGT‑GGCATAACAGCGCGGCAaca < 2:1069683/140‑1 (MQ=255)
aCGCTGAAACTCTTGCCGGGATATATCACTCATAACACTCTCCTTACATTTTTTGTTTTTAGTGTAGAGTCGGTTTTTGTACTTCTGGCGCGGGCGGTTGCGGATGAGTAAAGGGGTCGT‑GGCATAACAGCGCGGCaa < 4:497726/138‑1 (MQ=255)
ttGCCGGGATATATCACTCATAACACTCTCCTTACATTTTTTGTTTTTAGTGTAGAGTCGGGTTTTGTAGTTATTGCGGGGGGGGTTGGGGGTTGGTAAAGGTGTGGTGGGCTTAAC‑GCGCGGCACCACCGGCGTTCTCg > 2:189661/1‑140 (MQ=255)
gCCGGGATATATCACTCATAACACTCTCCTTACATTTTTTGTTTTTAGTGTAGAGTCGGTTTTTGTAATTCTGGCGCGGGCGGTGGGGGATGAGGAAAGGTGTCGT‑GGCATAACAGCGCGGCAACACCGACGTACTCgat > 1:896034/1‑140 (MQ=255)
gCCGGGATATATCACTCATAACACTCTCCTTACATTTTTTGTTTTTAGTGTAGAGTCGGGTTTTGTTATTCTGGGGCGGGCGGGTGCGGAGGAGTAAATGTGTCGT‑GGGCTAAAAGCGCGGGAACACGGACGTaaagtct > 1:1074398/1‑134 (MQ=255)
cGGGATATATCACTCATAACACTCTCCTTACATTTTTTGTTTTTAGTGTAGAGTCGGTTTTTGTACTTCTGGCGCGGGCGGTTGCGGATGAGTAAAGGTGTCGT‑GGCATAACAGCGCGGCAACACGGACGTACTCgatga < 7:87633/140‑1 (MQ=255)
gggATCTATCACTCATAACACTCTCCTTACATTTTTTGTTTTTAGTGTAGAGTCGGTTTTTGTACTTCTGGCGCGGTCGGTTGCGGATGAGTAAAGGTGTAGT‑GGCATAACAGCGCGGCAACACGGACGTACTCgatgat < 6:354063/140‑1 (MQ=255)
gggATATATCACTCATAACACTCTCCTTACATTTTTTGTTTTTAGTGTAGAGTCGGTTTTTGTACTTCTGGCGCGGTCGGTTGCGGATGAGTAAAGGTGTCGT‑GGCATAACAGCGCGGCAACACGGACGTACTCgatgat < 6:914690/140‑1 (MQ=255)
ggATATATCACTCATAACACTCTCCTTACATTTTTTGTTTTTAGTGTAGAGTCGGTTTTTGTACTTCTGGCGCGGTCGGTTGCGGATGAGTAAAGGTGTCGT‑GGCATAACAGCGCGGCAACACGGACGTACTCgatga < 3:501312/138‑1 (MQ=255)
gATATATCACTCATAACACTCTCCTTACATTTTTTGTTTTTAGTGTAGAGTCGGTTTTTGTACTTCTGGCGCGGTCGGTTGCGGATGAGTAAAGGTGTCGT‑GTCATAACAGCGCGGCAACACGGACGTACTCGATGAtct < 1:681254/140‑1 (MQ=255)
ccTCATAACACTCTCCTTACATTTTTTGTTTTTAGCGTAGAGTCGGTTTTTGTACTTCTGGCGCGGTCGGTTGCGGATGAGTAAAGGTGTCGT‑GGCATAACAGCGCGGCAACACGGACGTACTCGATGATCTCTTCAAGc < 2:240322/139‑1 (MQ=255)
cTCATAACACTCTCCTTACATTTTTTGTTTTTAGTGTAGAGTCGGTTTTTGTACTTCTGGCGCGGTCGGTTGCGGATGAGTAAAGGTGTCGT‑GGCATAACAGCGCGGCAACACGGACGTACTCGATGATCTCTTCAAg < 4:415463/138‑1 (MQ=255)
cTCATAACACTCTCCTTACATTTTTTGTTTTTAGTGTAGAGTCGGTTTTTGTACTTCTGGCGCGGTCGGTTGCGGATGAGTAAAGGTGTCGT‑GGCATAACAGCGCGGCAACACGGACGTACTCGATGATCTCTTCAAg < 4:678656/138‑1 (MQ=255)
cTCATAACACTCTCCTTACATTTTTTGTTTTTAGTGTAGAGTCGGTTTTTGTACTTCTGGCGCGGTCGGTTGCGGATGAGTAAAGGTGTCGT‑GGCATAACAGCGCGGCAACACGGACGTACTCGATGATCTCTTCAAGCg < 6:61719/140‑1 (MQ=255)
cTCATAACACTCTCCTTACATTTTTTGTTTTTAGTGTAGAGTCGGTTGTTGTACTTCTGGCGCGGTCGGTTGCGGATGAGTAAAGGTGTCGT‑GGCATAACAGCGCGGCAACACGGACGTACTCGATGATCTCTTCAAGCg < 6:1053843/140‑1 (MQ=255)
cTCATAACACTCTCCTTACATTTTTAGTTTTTAGTGTAGAGTCGGTTTTTGTACTTCTGGCGCGGTCGGTTGCGGATGAGTAAAGGTGTCGT‑GGCATAACAGCGCGGCAACACGGACGTACTCGATGATCTCTTCAAGCg < 1:139978/140‑1 (MQ=255)
atCATAACACTCTCCTTACTTTTTTTGTTTTTAGTGTAGAGTCGGTTTTTGGACTTCTGGCGCGGGCGGTTGCGGATGAGTAAAGGGGTCGT‑GGCATAACAGCGCGGCAACACGGACGTACTCGATGATCTCTTCAAg < 4:827124/137‑1 (MQ=255)
tCATAACACTCTCCTTACATTTTTTGTTTTTAGTGTAGAGTCGGTTTTTTTACTTATGGCGCGGTGGGTTGCGGATGATTTAAGGTGTGGT‑GGCATAACAGCGCGGCAACACGGACGGACTCGATGATGTCTTAAAGccc > 1:302083/1‑138 (MQ=255)
tCATAACACTCTCCTTACATTTTTTGTTTTTAGTGTAGAGTCGGTTTTTGTACTTCTGGGGCGGTCGGTTGCGGGTGAGTAAAGTTGTCGT‑GTCAAAAACGCGCGGCAACCCGGCCGGACACGATGATAGCTTCAAGCGa > 8:762664/1‑140 (MQ=255)
cATAACACTCTCCTTACATTTTTTGTTTTTAGTGTAGAGTCGGTTTTTGTACTTCTGGCGCGGTCGGTTGCGGATGAGTAAAAGTGTCGT‑GGCATAACAGCGCGGCAACCCGGACGTACTCGATGATCTCGTAAAGCgcc > 2:300261/1‑138 (MQ=255)
aaCACTCTCCTTACATTTTTTGTTTTTAGTGTAGAGTCGGGTTTTTTACTTATGGCGCGGTCGGTTGCGGATGAGTAAAGGTGTCGT‑GGGATAACAGCGCGGCAAAACGGACGTACTAGAAGATCTATTAAAGCGCCAtt > 5:504653/1‑140 (MQ=255)
ctcCTTACATTTTTTGTTTTTAGTGTAGAGTCGGTTTTTGTACTTCTGGCGCGGTCGGTTGCGGATGAGTAAAGGTGTCGT‑GGCATAACAGCGCGGCAACACGGACGTACTCGATGATCTCTTCAAGCGACATTTCAAGc < 5:397434/140‑1 (MQ=255)
ctcCTTACATTTTTTGTTTTTAGTGTAGAGTCGGTTTTTGTACTTCTGGCGCGGTCGGTTGCGGATGAGTAAAGGTGTCGT‑GGCATAACAGCGCGGCAACACGGACGTACTCGATGATCTCTTCAAGCGACATTTCAAGc < 1:721611/140‑1 (MQ=255)
ctcCTTACATTTTTTGTTTTTAGTGTAGAGTCGGTTTTTGTACTTCTGGCGCGGTCGGTTGCGGATGAGTAAAGGTGTCGT‑GGCATAACAGCGCGGCAACACGGACGTACTCGATGATCTCTTCAAGCGACATTTCAAGc < 1:22302/140‑1 (MQ=255)
ctcCTTACATTTTTTGTTTTTAGTGTAGAGTCGGGTTTTGTACTTCTGGCGCGGTCGGTTGCGGATGAGTTAAGGTGTCGT‑GGCATAACAGCGCGGGCACCCGGGCGTAAGAGATGATCGCTTAAAGCGACCTTTGAAGc > 8:45753/1‑140 (MQ=255)
ctcCTTACATTTTTTGTTTTTAGTGTAGAGACGGTTTATGTACATAACGCGCGGTCGTTGGGGGAGGAGTAAATGTGTCGT‑GGAAGACAAGCGCGGCAACACGGCCGCAAGCGATGATCTCTTCAAGCGACATTTAAAGc > 8:341890/1‑140 (MQ=255)
atcCTTACATTTTTTGTTTTTAGTGTAGAGTCGGTTTTTGTACTTCTGGCGCGGTCGGTTGCGGATGAGTAAAGGTGTCGT‑TGCATAACAGCGCGGCAACACGGACGTACTCGATGATCTCTTCAAGCGACATTTCAAGc < 6:765355/139‑1 (MQ=255)
tcCTTACATTTTTTGTTTTTAGTGTAGAGTCGGTTTTTGTACTTATGGCGCGGTGGGTTGGGGATGAGTAAAGGTGTCGT‑GGCATAACAGCGCGGCAACACGGCCGTACACGATGATGTCTTAAAGCGCCATTTAAAg > 3:787299/1‑138 (MQ=255)
tcCTTACATTTTTTGTTTATAGTGTAGAGTCGGTTTTTTTAATTATGGCGCGGGAGGTTGCGGCTTAGTAAAGGTGGCGT‑GGGATAAAGGGCCGGGAACCCGGACGGACGAGATGATATCTTCAAGCGCCAATTGAAg > 4:714692/1‑138 (MQ=255)
ccTTACATTTTTTGTTTTTAGTGTAGAGTCGGTTTTTTTACATCTGGCCCGGGCGGGTGCGGAGGATTAAAGGTGTCGT‑GGCATAACACCGCGCCAACACCGACGGAATAGATGATCTCTTCAAGCCACATTTAAAGc > 3:815671/1‑138 (MQ=255)
ccTTACATTTTTTGTTTTTAGTGTAGAGTCGGTTTTTGTACTTAAGGCGCGGTCGGTTGCGGAAGATGAAAGGTGTCGT‑GGCATAAAAGCGCGGCAACACGGACGGACTCGATGATCTCTTCAAGCGACATTTCAAggac > 2:422024/1‑137 (MQ=255)
ccTTACATTTTTTGTTTTTAGTGTAGAGTCGGTTTTTGTAATTATGGCGCGGTCGGTTGCGGATGAGGAAATGGGTCGT‑GGCATAACAGCGCGGCAACACGGACGTACGAGCTGATCTAGTACAGAGACATTTAAAgata > 6:86620/1‑137 (MQ=255)
ccTTACATTTTTTGTTTTTAGTGTAGAGGCGGGTTTTGTACGTATGGCGCGGTCGGTTGCGGATGATGAAAGGTGTGGG‑GGCCTAACAGCGCGGCGACCCGGCGGGACTCGAGGGTCGCGTCAAGCGGCCATTCAAGc > 4:924064/1‑138 (MQ=255)
ttACATTTTTTGTTTTTAGTGTAGAGTCGGTTTTTGTACTTCTGGCGCGGTCGGTTGGGGAGGTGGAAATGTGTCGT‑GGCATAACAGCGCGGGCACACGGACGGACTCGATGTTCTCTTCAAGCGACATTTGAAGctg > 4:221972/1‑137 (MQ=255)
gtgtAGAGTCGTGTTTTGTACTTCTGGAGCGGTCTTTTGCGGATGAGTAAAGGTGGAGT‑GGAATAACAGCGCGGCAACACGGACGTACTCGATGATCTCTTCAAGCGACATTTCAAGCTCTTCCTGATcttcgtcttagt < 1:961353/140‑1 (MQ=255)
gtgtAGAGTCGGTTTTTGTACTTCTGGCGCGGGCGGTTGCGGATGAGTAAAGGTGTCGT‑GGCATAACAGCGCGGCAACACGGACGTACTCGATGATCTCTTCAAGCGACATTTCAAGCTCTTCCTGATcttcgtcttcgt < 5:415498/140‑1 (MQ=255)
gcGGTTTTTGTACTTCTGGCGCGGTCGGTTGCGGATGAGTAAAGGTGTCGT‑GGCATAACAGCGCGGCAACACGGACGTACTCGATGATCTCTTCAAGCGACATTTCAAGCTCTTCCTGATCTTCGTCTTCGTCGTAAccc < 2:12936/139‑1 (MQ=255)
ggTTTTTGTACTTCTGGCGCTGTCGTGTGCGGATGAGTAAAGGTGTCGT‑GGCATAACAGCGCGGCAACACGGACGTTCTCGATGATCTCTTCAAGCGACCTTTCAAGCTCTTCCTGATCTTCGTCTTCGTCGTAAccc < 4:317459/138‑1 (MQ=255)
ggTTTTTGTACTTCTGGCGCGGTCGGTTGCGGATGAGTAAAGGTGTCGT‑GGCATAACAGCGCGGCAACACGGACGTACTCGATGATCTCTTCAAGCGACATTTCAAGCTCTTCCTGATCTTCGTCTTCGTCGTAACCCaa < 7:502874/140‑1 (MQ=255)
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CTGGTGCAGCAAAAATCAGCGCGGCGCTGCCGGGTTGCATTTGCTCTACCAGGGCCTGACGGCGACGCTGAAACTCTTGCCGGGATATATCACTCATAACACTCTCCTTACATTTTTTGTTTTTAGTGTAGAGTCGGTTTTTGTACTTCTGGCGCGGTCGGTTGCGGATGAGTAAAGGTGTCGT‑GGCATAACAGCGCGGCAACACGGACGTACTCGATGATCTCTTCAAGCGACATTTCAAGCTCTTCCTGATCTTCGTCTTCGTCGTAACCCAA > NZ_CP022686/1674087‑1674361
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| Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
N/A
