Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A8 F2 I0 R1
|
122 |
5985.5 |
7364544 |
98.3% |
7239346 |
135.6 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
freq |
annotation |
gene |
description |
| RA |
NZ_CP022686 |
3,444,704 |
T→G |
17.2% |
T530P (ACC→CCC) |
btsT ← |
pyruvate/proton symporter BtsT |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NZ_CP022686 | 3,444,704 | 0 | T | G | 17.2%
| 280.7
/ 12.9
| 171 | T530P (ACC→CCC) | btsT | pyruvate/proton symporter BtsT |
| Reads supporting (aligned to +/- strand): ref base T (51/86); new base G (32/2); total (83/88) |
| Fisher's exact test for biased strand distribution p-value = 6.27e-10 |
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 |
Only 100 of 175 total aligned reads displayed.
TGGTTGGAAATACCGAACAGCGGCCACAGGCTCTTAACGCCGCCCAGCGGATCGACCACGCCCTGATACAGCAGGTAGCCCCACAGACCCACACAGCCCGCAGTACCGATGATACCGGCAACCAGAGAGTCGGTTTTTTTCAGGAACGGGATGAAGTTACCCAGCAGGTCTTGCAGCATAAAGCGGCCAGA‑ACGGGTACCCGCATCCAGCGCGGTCAGGATGAACAGTGCTTCGAACAGAATACCGAAGTGATACCAGAAGCCCATGTCAGCC > NZ_CP022686/3444571‑3444843
|
tGGAAATACCGAACAGCGGCCACAGGCTCTTAACGCCGCCCAGCGGATCGCCCACGCCCTGATACAGCAGGTAGCCCCACAGCCCCACACAGCCCGCAGTACCGATGATACCGGCAACCAGAGAGTCGGTTTTTTTCa > 6:718635/1‑138 (MQ=255)
ggAAATACCGAACAGCGGCCACAGGCTCTTAACGCCGCCCAGCGGATCGACCACGCCCTGATACAGCAGGTAGCCCCACAGACCCACACAGCCCGCAGTACCGATGATACCGGCAACCAGAGAGTCGGTTTTTTTCAg < 5:102532/138‑1 (MQ=255)
ggAAATACCGAACAGCGGCCACAGGCTCTTAACGCCGCCCAGCGGATCGACCACGCCCTGATACAGCAGGTAGCCCCACAGACCCACACAGCCCGCAGTACCGATGATACCGGCAACCAGAGAGTCGGTTTTTTTCAGGa < 4:902267/140‑1 (MQ=255)
ggAAATACCGAACAGCGGCCACAGGCGCTTAACGCCGCCCAGCGGATCGACCACGCCCTGATACAGCAGGTAGCCCCACAGACCCACACAGCCCGCAGTACCGATGATACCGGCAACCAGAGAGTCGGTTTTTTTCAg < 5:528917/138‑1 (MQ=255)
taaaTACCGAACAGCGGCCACAGGCTCTTAACGCCGCCCAGCGGATCGACCACGCCCTGATACAGCAGGTAGCCCCACAGACCCACACAGCCCGCAGTACCGATGATACCGGCAACCAGAGAGTCGGTTTTTTTCAGGaa < 3:749800/139‑1 (MQ=255)
gAAATACCGAACAGCGGCCACATGCTCTTAACGCCGCCCAGCGGATCGACCACGCCCTGATACAGCAGGTAGCCCCACAGACCCCCACAGCCCGCAGTACCGATGATACCGGCACCCAGAGAGTCGGGGTTTTTCAGGaa > 4:670141/1‑140 (MQ=38)
gAAATACCGAACAGCGGCCACAGGCTCTTAACGCCGCCCAGCGGATCGACCACGCCCTGATACAGCAGGTAGCCCCACAGACCCACACAGCCCGCAGTACCGATGATACCGGCAACCAGAGAGTCGGTTTTTTTCAGGaa < 7:701052/140‑1 (MQ=255)
tACCGAAAAGCTGCCACAGGCTCTTAACGACGCCCAGCGGATCTACCACGCCCTGATACAGCAGGTAGCCCCACCGCCCCACACAGCCCGCAGTACCTATGATACCGGCAACCAGAGAGGCGGTTTTTTTCTGGAAAggg > 8:212804/1‑140 (MQ=255)
ccGAACAGCGGCCACAGGCTCTTAACGCCGCCCAGCGGATCGCCCACGCCCTGATACAGCAGGTAGCCCCACAGACCCACACAGCCCGCAGTACCGCTGATACCGGCAACCAGAGAGTCGGGGTTTTTGAGGACCggggg > 1:157605/1‑138 (MQ=255)
aCAGCGGCCACAGGCTCTTAACGCCGCCCAGCGGATCGACCACGCCCTGATACAGCAGGTAGCCCCACAGACCCACACAGCCCGCAGTACCGATGATACCGGCAACCAGAGAGTCGGTTTTTTTCAGGAACGGGATGa < 6:801138/138‑1 (MQ=255)
aGCGGCCACAGGCTCTTAACGCCGCCCAGCGGATCGACCACGCCCTGATACAGCAGGTAGCCCCACAGACCCACACAGCCCGCAGTACCGATGATACCGGCAACCAGAGAGTCGGTTTTTTTCAGGAACGGGATGAAGtt < 7:771893/140‑1 (MQ=255)
cGGCCACAGGCTCTTAACGCCGCCCAGCGGATCGACCACGCCCTGATACAGCAGGTAGCCCCACAGACCCACACAGCCCGCAGTACCGATGATACCGGCAACCAGAGAGTCGGGTTTTTTCAGGAACGGGATGAAGTTAc > 2:635284/1‑140 (MQ=255)
ggCCACAGGCTCTTAACGCCGCCCAGCGGATCGACCACGCCCTGATACAGCAGGTAGCCCCACAGACCCACACAGCCCGAAGTACCGATGATACCGGCAACCAGAGAGTCGGTTTTTTTCAGGAACGGGATGAAGTTa < 6:71257/138‑1 (MQ=255)
gCCACAGGCTCTTAACGCCGCCCAGCGGATCGACCACGCCCTGATACCGCAGGTAGCCCCACAGACCCACACCGCCCGCAGTACCGATGATAACGGCAACCAGAGAGTCGGGTTTTTTAAGGGCCGGGaagaagatta > 5:381831/1‑134 (MQ=38)
ctctTAACGCCGCCCAGCGGATCGACCACGCCCTGATACAGCAGGTAGCCCCACAGACCCACACAGCCCGCAGTACCGATGATACCGGCAACCAGAGAGTCGGGTTTTTTAAGGAACGGGGAGTAGTTACCCAGCAGGtg > 2:953881/1‑139 (MQ=39)
ttAACGCCGCCCAGCGGATCGACCACGCCCTGATACAGCAGGTAGCCCCACAGACCCACACAGCCCGCAGTACCGATGATACCGGCAACCAGAGAGTCGGTTTTTTTCAGGAACGGGATGAAGTTACCCAGCAGGTCt < 5:662739/138‑1 (MQ=255)
ttAACGCCGCCCAGCGGATCGACCACGCCCTGATACAGCAGGTAGCCCCACAGACCCACACAGCCCGCAGTACCGATGATACCGGCAACCAGAGAGTCGGGTTTTTTAAGGAACGGGATGAAGTTACCCAGCAGGTCTTg > 7:832769/1‑140 (MQ=255)
aaCGCCGCCCAGCGGATCGCCCACGCCCTGATACAGCAGGTAGCCCCACAGCCCCACACAGCCCGCAGTACCGATGCTACCTGCACCCAGAGAGTCGGGTTTTTTCAGGAAAGGGATGAAGGTACCCAGCAGGTCTTgga > 8:566091/1‑138 (MQ=255)
cgccgcCCAGCGGATCGACCACGCCCTGAGACAGCAGGTAGCCCCACAGACCCACACAGCCCGCAGTACCGATGATACAGGCAACCAGAGAGTCGGTTTTTTTCAGGAACGGGATGAAGTTACCCAGCAAGTGTTgcagc > 2:215236/1‑140 (MQ=255)
cgccCAGCGGATCGACCACGCCCTGATACAGCAGGTAGCCCCACAGACCCACACAGCCCGCAGTACCGATGCTACCGGCAACCAGAGAGTCGGTTTTTTTAAGGAACGGGGTGAAGTTACCCCGCAGGGCTTGCAGAATa > 1:238349/1‑140 (MQ=39)
cgccCAGCGGATCGACCACGCCCTGATACAGCAGGTAGCCCCACAGACCCACACAGCCCGCAGTACCGATGATACCGGCAAGCAGAGAGTCGGTTTTTTTCAGGATAGGGATGAAGTTACCCAGCAGGTCTTGCAGCATa > 7:516212/1‑140 (MQ=255)
gccCAGCGGATCGACCACGCCCTGATACAGCAGGTAGCCCCACAGCCCCACACAGCCCGCAGTACCGATGATACCGGCAACCAGAGAGTCGGGTTTTTTAAGGAACGGGATGAAGTTACCCAGCAGGGATTGCAGCATaa > 3:852029/1‑140 (MQ=39)
gccCAGCGGATCGACCACGCCCTGATACAGCAGGTAGCCCCACAGACCCACCCAGCCCGCAGTACCGATGATACCGGCAACCAGAGAGTCTGTTTTTTTATGGATCGGGCTGTAGTTGCCACGCCGGTGTTGCAGCAttt > 2:399156/1‑138 (MQ=37)
gccCAGCGGATCGACCACGCCCTGATACAGCAGGTAGCCCCACAGACACACACAGCCCGCAGTACCGATGATACCGGCAACACGAGAGTCGGGTTTTTTCAGGTACGGGATGAAGTTACCCAGCAGGTGCTTCAGCATaa > 8:714875/1‑140 (MQ=38)
ccAGCGGATCGACCACGCCCTGATACAGCAGGTAGCCCCACAGACCAACACAGCCCGCAGTACCGATGATACCGGCAACCAGAGAGTCGGTTTTTTTAAGGTACGGGATGAAGTTACCAAACAAGTCTTGCAGAATaa > 5:611234/1‑138 (MQ=255)
ggATCGACCACGCCCTGATCCAGCAGGTAGCCCCACAGACCCACACAGCCCGCAGTACCGATGATACCGGCAACCAGAGAGTCGGTTTTTTTCAGGAACGGGATGAAGTTACCCAGCAGGTCTTGCAGCATAAAGCGGcc < 4:519080/140‑1 (MQ=255)
gATCGACCACGCCCTGATACAGAAGGTAGCCCCACAGACCCACACAGCCCGCAGTACCGATGATACCGGCAACCAGAGAGTCGGTTTTTTTCAGGAACGGGATGAAGTTACCCAGCAGGTCTTGCAGCATAAAGCGGCCa < 3:392699/140‑1 (MQ=255)
aTCGACCACGCCCTGATACAGCAGGTAGCCCCACAGACCCACACAGCCCGCAGTACCGATGATACCGGCAACCAGAGAGTCGGGTTTTTTCAGGAACGGGATGAAGTTACCCAGCAGGTCTTGCAGCATAAAGCGGCCac > 1:25912/1‑139 (MQ=255)
tCGAACACGCCCTGATACAGCAGGTAGCCCCACAGACCCACACAGCCCGCAGTACCGATGATACCGGCAACCAGAGAGTCGGTTTTTTTCAGGAACGGGATGAAGTTACCCAGCAGGTCTTGCAGCATAAAGCGGCCAGa < 4:433796/140‑1 (MQ=255)
cACGCCCTTAACCAGCAGGTAGCCCCACAGACCCACACAGCCCGCATAACCGATCATACCGGCAACCAGAGAGTCGGTTTTTTTCAGGAACGGGATGAAGTTACCCAGCAGGTCTTGCAGCATAAAGCGGCCAGA‑ACg < 5:832330/138‑1 (MQ=255)
cccTGATACAGCAGGTAGCCCCACAGACCCACACAGCCCGCAGTACCGATGATACCGGCAACCAGAGAGTCGGTTTTTTTCAGGAACGGGATGAAGTTACCCATCAGGTCTTGCAGCATAAAGCGGCCAGA‑ACGGGTa < 6:57134/138‑1 (MQ=255)
aTACAGCAGGTAGCCCCACAGACCCACACAGCCCGCAGTACCGATGATACCGGCAACCAGAGAGTCGGGTTTTTTCAGGAACGGGATTAAGTTACCCAGCAGGTCGTGCAGCATAAAGCGGCCAGC‑ACGGGGACCCGcct > 4:620878/1‑138 (MQ=255)
cgcagGTAGCCCCACAGACCCACACAGCCCGCAGTACCAATGATACCGGCAACCAGAGAGTCGGTTTTTTTCAGGAACGGGATGAAGTTACCCAGCAGGTCTTGCAGCATAAAGCGGCCAGA‑ACGGGTACCCGCATCCAg < 1:297973/139‑1 (MQ=255)
agcagGTAGCCCCACAGCCCCACACAGCCCGCAGTACCGATGATACCGGCAACCAGAGAGTCGGTTTTTTTGAGGAACGGGCTGCAGGTTCCCCGCAGGGCTTGCCGCCAAAAGCGGCCAGC‑ACGGGTACCCGCCTcccg > 1:724576/1‑138 (MQ=255)
agcagGTAGCCCCACAGACCCACACAGCCCGCAGTACCGATGATACCGGCAACCAGAGAGTCGGTTTTTTTCAGGAACGGGATGAAGTTACCCAGCAGGTCTTGCAGCATAAAGCGGCCAGA‑ACGGGTACCCGCATCCAg < 3:94463/140‑1 (MQ=255)
agcagGTAGCCCCACAGACCCACACAGCCCGCAGTACCGATGATACCGGCAACCAGAGAGTCGGGTTTTTTGAGGAACGGGATGAAGTTTCCCCGCCGGTCTGGCCGCATAAAGCGGCCAGC‑ACCGGTTCCCGCATcccg > 3:678479/1‑138 (MQ=255)
agcagGTAGCCCCACAGACCCACACAGCCCGCAGTACCGATGATACCGGCAACCAGAGAGTCGGGTTTTTTCAGGGACGGGAGGTATTTACCCAGCAGGTCTTTGAGCTTAAAGCGGGCAGACGCGGGTAccccttcccc > 1:941789/1‑133 (MQ=255)
cagGTAGCCCCACAGACCCACACAGCCCGCAGTACCGATGATACCGGCAACCAGAGAGTCGGTTTTTTTGAGGGACGGGGTGAAGTTAACCCGCAGGTGTTGCAGCATAAAACGGCCAGA‑ACCGGTACCCGCCTCCAgcg > 3:445709/1‑140 (MQ=255)
cagGTAGCCCCACAGACCCACACAGCCCGCAGTACCGATGATACCGGCAACCAGAGAGTCGGTTTTTTTCAGGAACGGGATGAAGTTACCCCGCCGGTCTTGCAGCATAACGCGGCCAGC‑ACGGGTACCCGCAtaccgcc > 1:832995/1‑134 (MQ=255)
cagGTAGCCCCACAGACCCACACAGCCCGCAGTACCGATGATACCGGCAACCAGAGAGTCGGTTTTTTTAAGGAACGGGATGCAGGTACCCAGCAGGTCTTGCAGCCTAAAGCGGCCAGA‑ACGGGTACCCGCCTCCAgcg > 1:21258/1‑140 (MQ=255)
cagGTAGCCCCACAGACCCACACAGCCCGCAGTACCGATGATACCGGCAACCAGAGAGTCGGGTTTTTTGAGTAACAGGTTGTATTTAAACAGCAGGTCTTGCAGCATAAACCGGCCAGA‑ACGGGTAACCGCATCCAgcg > 4:406630/1‑140 (MQ=255)
cagGTAGCCCCACAGACCCACACAGCCCGCAGTACCGATGATACCGGCAACCAGAGAGTCGGGTTTTTTAAGGAACGGGATGAAGTTACACACCAGGTCATTCAGCATAAACCGGCCAGA‑ACCCGTAACCCCATCCAgcc > 1:101286/1‑139 (MQ=255)
cagGTAGCCCCACAGACCCACACAGCCCGCAGTACCGATGATACCCGCAACCACAGAGTCGGTTTTTTTAAAGCACGGGATGAAGTTAACCACCAGGTCTTGCAGCATAAAGCGGCCAGA‑ACGGGTACCCGAATCCAgcc > 7:103904/1‑139 (MQ=255)
ggTAGCCCCACAGACCCACACAGCCCGCAGTACCGATGATACCGGCAACCAGAGAGTCGGTTTTTTTAAGGAACGGGATGAAGTTAACCAGCAGGTCTTGCAGCATAAAGCGGCCAGA‑ACGGGTACCCGCAGACAGcgcg > 8:489308/1‑140 (MQ=255)
ggTAGCCCCACAGACCCACACAGCCCGCAGTACCGATGATACCGGCAACCAGAGAGTCGGGTTTTTTGATGAAACGGCTGAATTTAACCCCCAGGTCATTCCGCATAAACCGGCCACA‑ACGGGTTCACGCATCCcgcg > 5:189749/1‑138 (MQ=255)
gTAGCCCCACAGACCCACACAGCCCGCAGTACCGAGGATCCCGGCAACCAGAGAGTCGGTTTTTTTCAGGAACGGGATGAAGTTACCCAGCAGGGCTTGCAGCATAAAGCGGCCAGA‑ACGGGTACCCGCATCCAGCGCgg < 2:658562/140‑1 (MQ=255)
tAGCCCCACAGACCCACACAGCCCGCAGTACCGATGATACCGGCAACCAGAGAGTCGGTTTTTTTCAGGAACGGGATGAATTTACCCAGCAGGTCTTGCCGCATAAAGCGGCCAGA‑ACGGGTACCCGCATCCCGCGCggg > 4:703216/1‑139 (MQ=255)
agccccacagccccacACAGCCCGCAGTCCCGATGATACCGGCAACAAGAGAGTCGGTTTTTTTCAGGAACGGGATGAAGTTACCCAGCAGGTCTTGCAGCATAAAGCGGCCAGA‑ACGGGTACCCGCATCCAGCGCgg < 6:336375/138‑1 (MQ=255)
aGCCCCACCGACCCACACAGCCCGCAGTACCGATGATACCGGCAACCAGAGAGTCGGTTTTTTTCAGGAACGGGATGAAGTTACCCAGCAGGTCTTGCAGCATAAAGCGGCCAGA‑ACGGGTACCCGCATCCAGCGCgggc < 2:712931/140‑3 (MQ=255)
aGCCCCACAGACCCACACAGCCCGCAGTACCGATGATACCGGCAACCAGAGAGTCGGTTTTTTTCAGGAACGGGATGAAGTTACCCAGCAGGTCTTGCAGCATAAAGCGGCCAGA‑ACGGGTACCCGCATCCAGCGCGGTc < 8:314944/140‑1 (MQ=255)
aGCCCCACAGACCCACACAGCCCGCAGTACCGATGATACCGGCAACCAGAGAGTCGGTTTTTTTCAGGAACGGGATGAAGTTACCCAGCAGGTCTTGCAGCATAAAGCGGCCAGA‑ACGGGTACCCGCATCCAGCGCGGTc < 2:607424/140‑1 (MQ=255)
aGCCCCACAGACCCACACAGCCCGCAGTACCGATGATACCGGCAACCAGAGAGTCGGTTTTTTTCAGGAACGGGATGAAGTTACCCAGCAGGTCTTGCAGCATAAAGCGGCCAGA‑ACGCGTACCCGCATCCAGCGCGGTc < 8:227784/140‑1 (MQ=255)
cccAGAGTCCAAGACATCCCGCAGTACCGATGATACCGGCAACCAGAGATTCGTTTTTTTTCATGAAAGGTATGAAGTTACCCAGCAGGTCTTGAAGCATAAAGGTGCCAGA‑ACGGGTACCCGCATCCAGCGCGGTCa < 6:391182/138‑1 (MQ=255)
cacaGACCCACACAGCCCGCAGTACCGATGATACCGGCAACCAGAGAGTCGGTTTTTTTAAGGAACGGGATGAAGTTACCCAGCAGGTCTTGGAGCATAAAGCGGCCAGA‑ACGGGTACCCGCCTCCAGCGCGGTCAGGAt > 3:710128/1‑140 (MQ=255)
cacaGACCCACACAGCCCGCAGTACCGATGATACCGGCAACCAGAGAGGCGGTTTTTTTCAGGAAAGGGATTTAGTTACCCAGCAGGTCTTGGATCATAAAGCGGCCAGC‑ACCGGGACCCCCCTCCAGCGCGGTCAgg > 6:54496/1‑138 (MQ=255)
caGACCCACACAGCCCGCAGTACCGATGATACCGGCAACCAGAGAGTCGGTTTTTTTCAGGaa < 7:223465/63‑1 (MQ=255)
agccccACACAGCCCGCAGTACCGATGATACCGGCAACCAGAGAGTCGGTTTTTTTGAGCCACCGGCTGAAGTTACCCCGCAGGGCTTGCAGCAAAAAGCCGGAAGA‑ACGGGTACCCCCATACATCCCGGGCAGGATGaa > 8:766542/4‑140 (MQ=255)
gACCCACACAGCCCGCAGTACCGATGATACCGGCAACCAGAGAGTCGGTTTTTTTCAGGAACGGGATGAAGTTACCCCGCAGGTCTTGCAGCATAAAGCGGCCAGG‑ACGGGGAACCGCATCCAGCGCGGTCAGGATGAAc > 4:383333/1‑140 (MQ=255)
aCCCACACAGCCCGCAGTACCGATGATACCGGCAACCAGAGAGTCGGTTTTTTTCAGGAACGGGATGAAGTTACCCAGCAGGTCTTGCAGCATAAAGCGGCCAGA‑ACGGGTACCCGCATCCAGCGCGGTCAGGATGAACa < 1:541544/140‑1 (MQ=255)
cacacaGCCCGCAGTACCGATGATACCGGCAACCAGAGAGTCGGTTTTTTTCAGGTACCGGATGAAGTTACCCCGCAGGTCTTGCAGCATAAAGCGGCCAGA‑ACGGGTACCCGCCACCAGCGCGGGCAGGATGAACAGTg > 1:112927/1‑140 (MQ=255)
acacaGCCCGCAGTACCGATGATACCGGCAACCAGAGAGTCGGTTTTTTTCAGGAACGGGTTGAAGTTACCCCCCAGGGGGTGCAGCATAAAGCGGCCCCA‑ACGGGTACCCCCCGCCCGCGCGGGGACGCTGAACAgg > 6:169160/1‑137 (MQ=255)
cacaGCCCGCAGTACCGATGATACCGGCAACCAGAGAGTCGGTTTTTTTCAGGAACGGGATGAAGTTACCCAGCAGGTCTTGCAGCATAAAGCGGCCAGA‑ACGGGTACCCGCATCCAGCGCGGTCAGGATGAACAGTGcg > 4:880544/1‑139 (MQ=255)
cacaGCCCGCAGTACCGATGATACCGGCAACCAGAGAGTCGGGTTTTTTAAGGATAGGGATGAAGTTTCCCCGCAGGTATTTCCGCATAAAGCGGCCAGA‑ACGGGTTCCCCCATCCACCCCCGGCCGGATGAACAGTgag > 1:143128/1‑138 (MQ=255)
aGCCCGCAGTACCGATGATACCGGCAACCAGAGAGTCGGTTTTTTTCAGGAACGGGATGAAGTTACCCAGCAGGTCTTGCAGCATAAAGCGGCCAGA‑ACGGGTACCCGCATCCAGCGCGGTCAGGATGAACAGTGCTTCg < 1:586557/140‑1 (MQ=255)
cccGCAGTACCGATGATACCGGCACCGAGAGAGTCGGTTTTTTTCAGGAACGGGATGAAGTTACCCAGCAGGTCTTGCAGCATAATGCGGCCAGA‑ACGGGTACCCGCATCCAGCGCGGTCAGGATGAACAGTGCTTCGaa < 7:272607/140‑1 (MQ=255)
cccGCAGTACCGATGATACCGGCAACCAGAGGGTCGGGTTTTTTCAGGAACGGGATGAAGTTACCCAGCAGGTCTTGCAGCATAAAGCGGCCAGA‑ACGGGTACCCGCATCCAGCGCGGTCAGGATGAACAGTGCTTCGaa > 8:84527/1‑140 (MQ=255)
cccGCAGTACCGATGATACCGGCAACCAGAGAGTCGGTTTTTTTCAGGAACGGGATGAAGTTACCCAGCAGGTCTTGCAGCATAAAGCGGCCAGA‑ACGGGTACCCGCATCCAGCGCGGTCAGGATGAACAGTGCTTCg < 6:127690/138‑1 (MQ=255)
cccGCAGTACCGATGATACCGGCAACCAGAGAGTCGGTTTTTTTCAGGAACGGGATGAAGTTACCCAGCAGGTCTTGCAGCATAAAGCGGCCAGA‑ACGGGTACCCGCATCCAGCGCGGTCAGGATGAACAGTGCTTCGaa < 7:530998/140‑1 (MQ=255)
cccGCAGTACCGATGATACCGGCAACCAGAGAGTCGGTTTTTTTCAGGAACGGGATGAAGTTACCCAGCAGGTCTTGCAGCATAAAGCGGCCAGA‑ACGGGTACCCGCATCCAGCGCGGGCAGGATGAACAGTGCTTCGaa < 4:795147/140‑1 (MQ=255)
ccGCAGTACCGATGATACCGGCAACCAGAGAGTCGGGTTTTTTAAGGTACGGGTTGAAGTTTCCCAGCAGGTCTTGCAGCATAAAGCGGCCAGA‑ACGGGTACCCGCAGACAGCGCGGTCAGGATGAACAGTGCTTCgg > 5:137910/1‑137 (MQ=255)
cccAGTACCGATGATACCGGCAACCAGAGAGTCGGTTTTTTTCAGGTACGGGATTAAGTTACCCAGCAGGGCTTGCAGCATAATGCGGCCCGA‑ACGGGTACCCGCATCCAGCGCGGTCAGGATGAACAGTGCTTCGAACa < 3:534932/138‑1 (MQ=255)
cGCAGTACCGATGATACCGGCACCCAGAGAGTCGGGTTTTTTAAGGGACGGGATGAAGTTACCCAGCAGGTCTAGCAGCATAAAGCGGGCAGA‑ACGGGTACCCCCCTCACGCGCGGTGAGGATGAACAGTGGGTGGAACa > 8:128869/1‑140 (MQ=255)
cGCAGTACCGATGATACCGGCAACCAGAGAGTCGGTTTTTTTCAGGAACGTGATGAAGTTACCCAGCAGGTCTTGCAGAATAAAGCGGCCAGA‑ACGGGTACCCGCATCCAGCGCGGTCAGGATGAACAGTGCTTCGAACa < 3:738751/140‑1 (MQ=255)
cGCAGTACCGATGATACCGGCAACCAGAGAGTCGGTTTTTTTCAGGAACGGGATGAAGTTACCCAGCAGGTCTTGCAGCATAAAGCGGCCAGA‑ACGGGTACCCGCATCCAGCGCGGTCAGGATGAACAGTGCTTCGAACa < 7:687279/140‑1 (MQ=255)
cGCAGTACCGATGATACCGGCAACCAGAGAGTCGGTTTTTTTCAGGAACGGGATGAAGTTACCCAGCAGGTCTTGCAGCATAAAGCGGCCAGA‑ACGGGTACCCGCATCCAGCGCGGTCAGGATGAACAGTGCTTCGAACa < 1:151984/140‑1 (MQ=255)
cGCAGTACCGATGATACCGGCAACCAGAGAGTCGGTTTTTTTCAGGAACGGGATGAAGTTACCCAGCAGGTCTTGCAGCATAAAGCGGCCAGA‑ACGGGTACCCGCATCCAGCGCGGTCAGGATGAACAGTGCTTCGAACa < 7:807662/140‑1 (MQ=255)
cGCAGTACCGATGATACCGGCAACCAGAGAGTCGGTTTTTTTCAGGAACGGGATGAAGTTACCCAGCAGGTATTGCAGCATAAAGCGGCCAGA‑ACGGGTACCCGCATCCAGCGCGGTCAGGATGAACAGTGCTTCGAACa < 1:83856/140‑1 (MQ=255)
cGCAGTACCGATGATACCGGCAACCAGAGAGTCGGGTTTTTTAAGGAAAGGGATGCATTTACACCGCAGGTCGTGCAGCCTAAAGCGGCCAGA‑ACGGGTACCCCCATCCAGCGAGGTCAGGATGAACAGTGcgtagca > 6:349600/1‑132 (MQ=255)
cGCAGTACCGATGATACCGGAAACCAGAGAGTCGGTTTTTTTCAGGAACGGGATGAAGTTACCCAGCAGGTCTTGCAGCATAAAGCGGCCAGA‑ACGGGTACCCGCATCCAGCGCGGTCAGGATGAACAGTGCTTCGaa < 6:526027/138‑1 (MQ=255)
acggatgatACCGGCTACCAGAGAGTGGGTTTTTTTCAGGAACGGGATGAAGTTACCCAGCAGGTCTTGCAGCATAAAGCGGGCAGA‑ACGGGTACCCGCATCCAGCGCGGTCAGGATGAACAGTGCTTCGAACAGAATAc < 1:478287/137‑1 (MQ=255)
cGATGATACCGGCAACCAGAGAGTCGGTTTTTTTGAGGAACGGGATGAAGTTACCCAGCAGGTCTTGCAGCATAAAGCGGCCAGA‑ACGGGTTCCCCCCTCCAGCGCGGTCAGGATTAACAGTGCGTAGAACAGAATAccc > 1:166448/1‑139 (MQ=255)
atgatACCGGCAACCAGAGAGTCGGTTTTTTTCAGGAACGGGATGAAGTTACCCAGCAGGTCTTGCAGCATAAAGCGGCCAGA‑ACCGGTACCCGCATCCAGCCCGGTCAGGATGAAAAGTGCTTCGAACAGAAAACCg > 5:583947/1‑138 (MQ=255)
atgatACCGGCAACCAGAGAGTCGGTTTTTTTCAGGAAAGGGATTAATTTACCCAGCAGGTCTTGCAGCATAAAGCGGCCAGA‑ACGGGTACCCGCATCCAGCGCGGTCAGGATGAACAGTGCTTCGAACAGAATACCgca > 2:546381/1‑138 (MQ=255)
atgatACCGGCAACCAGAGAGTCGGGTTTTTTAAGGCACGGGATGAAGTTACCCAGCAGGTCGTGCAGCATAAAGCGGCCAGA‑ACGGGTACCCGCATCCCGCGCGGTCAGGAGGAACAGGGCTTCGAACAGAATACAGaa > 4:807411/1‑140 (MQ=255)
gatACCGGCAACCAGAGAGTCGGTTTTTTTCAGGAACGGGATGAAGTTACCCAGCAGCTCTTTCAGCATAAAGCGGCCAGA‑ACGGGTACCCGCATCCAGCGCGGTCAGGATGAACAGTGCTTCGAACAGAATACCGaa < 6:732953/138‑1 (MQ=255)
aCCGGCAACCAGAGAGTCGGTTTTTTTCAGGAACGGGATTAAGTTAACCAGCAGGTCTTGCAGCATAAAGCGGCCAGA‑ACGGGTACCCCCAACCAGCGCGGTCAGGATGAAAAGGGCTTGGAACAGAATACCGAAGTGAt > 8:616912/1‑140 (MQ=255)
aCCGGCAACCAGAGAGTCGGTTTTTTTAAGGAACGGGATGAAGTTACCCCGCAGGTCTTGCAGCATAAAGCGGCCAGA‑ACGGGTACCCCCCTCCCGCGCGGTCAGGATGAACAGTGCTTCGACAAGCATACCGAAGTgct > 7:836121/1‑138 (MQ=255)
aCCGGCAACCAGAGAGTCGGTTTTTTTAAGGAACGGGATGAAGTTACCCAGCAGGTCTTTCACCATAAAGCGGCCAGA‑ACGGGTACCCGCATCCAGCGCGGTCAGGATTAACAGTGCTTAGAACAGAATACCGAAGTGAt > 4:165035/1‑140 (MQ=255)
cGGCAACCAGAGAGTCGGTTTTTTTCAGGAACGGGATGAAGTTAACCAGCAGGTCTTGCAGCATAAAGCGGCCAGA‑ACGGGTACCCGCATCCAGCGCGGGGAGGATGAACAGTGCTTCGAACAGAATACCGAAGTGATAc > 2:431069/1‑140 (MQ=255)
cGGCAACCAGAGAGTCGGGTTATTTCATGAAAGGGTTGAAGTTAACCAGACGGGCGTTCAGGCTAAACCGGCAATA‑ACCGGAACCCGAAACCACAGCGGTCAGGAGGAAAACATCTTACAAAAGAAAACCCAAGTGAt > 6:432595/1‑138 (MQ=255)
gCAACCAGAGAGTCGGGTTTTTTAAGGAACGGGATGAATTTAACCCGCAGGTCTTGCAGCATAAAGCGGCCAGA‑ACGGGTACCCGCCTACAGCGCGGGCAGGATGAAAAATGCTTCGAACAGAATACCGAAGTGATAc > 5:286329/1‑138 (MQ=255)
cAACCCGAGAGTCGGTTTTTTTCAGGAACGGGATGAAGTTACCCAGCAGGACTTGCAGCATAAAGCGGCCAGA‑ACGGGTACCCGCATCCAGCGCGGTCAGGATGAACAGTGCTTCGAACAGAATACCGAAGTGATACCAg < 8:279688/140‑1 (MQ=255)
cAACCAGAGAGTCGGTTTTTTTCAGGAACGGGATGAAGTTTCCCAGCAGGTCTTGCAGCATAAAGCGGCCAGA‑ACGGGTACCCGCATCCAGCGCGGTCAGGATGCACAGTGCTTCGAACAGAATACCGAAGTGATACCAg > 1:889585/1‑140 (MQ=255)
cAACCAGAGAGTCGGTTTTTTTCAGGAACGGGATGAAGTTACCCAGCAGGTCTTGCAGCATAAAGCGGCCAGA‑ACGGGTACCCGCATCCAGCGCGGTCAGGATGAACAGTGCTTCGAACAGAATACCGAAGTGATAcc < 5:742692/138‑1 (MQ=255)
gTCGGTTTTTTTCAGGAACGGGATGAAGTTACCCAGCAGGTCTTGCAGCATAAAGCGGCCAGA‑ACGGGTACCCGCATCCAGCGCGGTCAGGATGAACAGTGCTTCGAACAGAATACCGAAGTGATACCAGAAGCCCATGt < 4:276201/140‑1 (MQ=255)
gTCGGTTTTTTTCAGGAACGGGATGAAGTTACCCAGCAGGTCTTGCAGCATAAAGCGGCCAGA‑ACGGGTACCCGCATCCAGCGCGGTCAGGATGAACAGTGCTTCGAACAGAATACCGAAGTGATACCAGAAGCCCATGt < 8:789096/140‑1 (MQ=255)
tCGGTTTTTTTCAGGAACGGGATTAAGTTACCCAGCAGGTCTTGCAGCATAAAGCGGCCAGA‑ACGGGTACCCGCATCCAGCGCGGTAAGTATGAACAGTGCTTCGAAAAGAATACCGCAGTTATACCAACAGCCCATGTc > 8:552431/1‑140 (MQ=255)
tCGGTTTTTTTAAGGAACGGGATGAAGTTACCCAGCAGGTCTTTCAGCAAAAATCGGCCAGA‑ACGGGTACCCGCATCCACCCCGGTCACGATGAACACAGCATCGAACACAATAACCAAGTGATACCAAAAcccccatta > 8:717663/1‑135 (MQ=255)
tttttttCAGGAACGGGATGAAGTTACCCAGCAGGTCTTGCAGCATAAAGCGGCCAGA‑ACGGGTACCCGCATCCAGCGCGGTCAGGATGAACAGTGCTTCGAACAGAATACCGAAGTGATACCAGAAGCCCATGTCAGcc < 1:388011/140‑1 (MQ=255)
tttttttCAGGAACGGGATGAAGTTACCCAGCAGGTCTTGCAGCATAAAGCGGCCAGA‑ACGGGTACCCGCATCCAGCGCGGTCAGGATGAACAGTGCTTCGAACAGAATACCGAAGTGATACCAGAAGCCCATGTCAGcc < 3:925374/140‑1 (MQ=255)
|
TGGTTGGAAATACCGAACAGCGGCCACAGGCTCTTAACGCCGCCCAGCGGATCGACCACGCCCTGATACAGCAGGTAGCCCCACAGACCCACACAGCCCGCAGTACCGATGATACCGGCAACCAGAGAGTCGGTTTTTTTCAGGAACGGGATGAAGTTACCCAGCAGGTCTTGCAGCATAAAGCGGCCAGA‑ACGGGTACCCGCATCCAGCGCGGTCAGGATGAACAGTGCTTCGAACAGAATACCGAAGTGATACCAGAAGCCCATGTCAGCC > NZ_CP022686/3444571‑3444843
|
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
N/A
