Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A8 F35 I0 R1
|
304 |
9232.4 |
10623078 |
98.3% |
10442485 |
135.6 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
freq |
annotation |
gene |
description |
| RA |
NZ_CP022686 |
2,546,394 |
A→C |
12.1% |
V95G (GTT→GGT) |
waaG ← |
glycosyltransferase family 4 protein |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NZ_CP022686 | 2,546,394 | 0 | A | C | 12.1%
| 281.0
/ 3.4
| 167 | V95G (GTT→GGT) | waaG | glycosyltransferase family 4 protein |
| Reads supporting (aligned to +/- strand): ref base A (84/57); new base C (2/22); total (86/81) |
| Fisher's exact test for biased strand distribution p-value = 2.49e-06 |
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 |
Only 100 of 176 total aligned reads displayed.
AGCAGCTGTGTCGGCTTGCCCTGTTCGAAGGTTGCCCGCTCAAAGGCGGCATAATGGCGATAACGTGACGTCAGGCGATAGAAAAAGCCTTTCTCCTGCGCTACTTTCTCGGCATAACAAACATCAGCGGCATAATAAACGTCCAGCCCCGGCATTTTATTAAATC‑CAACGACTCTATCGACGGGGTGTTCACGTAAATGTTTTTGCACCCAGGCAAAATATTCCGCATTGCGCCCGTGATTGGTATGCGATTTAACCGGCACTTTGATCAGTTCAAA > NZ_CP022686/2546256‑2546533
|
cagcTGTGTCGGCTTGCCCTGTTCGAAGGTTGCCCGCTCAAAGGCGGCATAATGGCGATAACGTGACGTCAGGCGATAGAAAAAGCCTTTCTCCTGCGCTACTTTCTCGGCATAACAACCATCAGCGGCATAATAAACGt > 2:294905/1‑140 (MQ=255)
cagcTGTGTCGGCTTGCCCTGTTCGAAGGTTGCCCGCTCAAAGGCGGCATAATGGCGATAACGTGACGTCAGGCGATAGAAAAAGCCTTTCTCCTGCGCTACTTTCTCGGCATAACAAACATCAGCGGCATAATAAACGt > 7:1258435/1‑140 (MQ=255)
cagcTGTGTCGGCTTGCCCTGTTCGAAGGTTGCCCGCTCAAAGGCGGCATAATGGCGATAACGTGACGTCAGGCGATAGAAAAAGCCTTTCTCCTGCGCTACTTTCTCGGCATAACAAACATCAGCGGCATAATAAACGt > 8:489001/1‑140 (MQ=255)
tgtCGGCTTGCCCTGTTCGAAGGTTGCCCGCTCAAAGGCGGCATAATGGCGATAACGTTACGTCAGGCGATAGAAAAAGCCTTTCTCCTGCGCTACTTTCTCGGCATAACAAACATCAGCGGCATAATAAACGTCCAGcc > 2:821157/1‑140 (MQ=255)
tgtCGGCTTGCCCTGTTCGAAGGTTGCCCGCTCAAAGGCGGCATAATGGCGATAACGTGACGTCAGGCGATAGAAAAAGCCTTTCTCCTGCGCTACTTTCTCGGCATAACAAACATCAGCGGCATAATAAACGTCCAg > 3:790849/1‑138 (MQ=255)
tCGGCTTGCCCTGTTCGAAGGTTGCCCGCTCAAAGGCGGCATAATGGCGATAACGTGACGTCAGGCGATAGAAAAAGCCTTTCTCCTGCGCTACTTACTCGCCATAACAAACATCAGCGGCATAAGAAACGTCCAGcccc > 8:1004246/1‑140 (MQ=255)
ggCTTGCCCTGTTCGAAGGTTGCCCGCTCAAAGGCGGCATAATGGCGATAACGTGACGTCAGGCGATAGAAAAAGCCTTTCTCCTGCGCTACTTTCTCGGCATAACAAACATCAGCGGCATAATAAACTTCCAGcccc > 3:811943/1‑138 (MQ=255)
cccTGTTCGAAGGTTGCCCGCTCAAAGGCGGCATAATGGCGATAACGTGACGTCAGGCGATAGAAAAAGCCTTTCTCCTGCGCTACTTTCTCGGCATAACAAACATCAGCGGCATAATAAACGTCCAGCCCCGGCAtttt > 2:70803/1‑140 (MQ=255)
cTGTTCGAAGGTTGCCCGCTCAAAGGCGGCATAATGGCGATAACGTGACGTCAGGCGATAGAAAAAGCCTTTCTCCTGCGCTACTTTCTCGGCATAACAAACATCAGCGGCATAATAAACGTCCAGCCCCGGCATTttat > 1:1082336/1‑140 (MQ=255)
gTTCGAAGGTTGCCCGCTCAAAGGCGGCATAATGGCGATAACGTGACGTCAGGCGATAGAAAAAGCCTTTCTCCTGCGCTACTTTCTCGGCATAACAAACATCAGCGGCATAATAAACGTCCAGCCCCGGCATTttat < 3:603401/138‑1 (MQ=255)
ttCGAAGGTTGCCCGCTCAAAGGCGGCATAATGGCGATAACGTGACGTCAGGCGATAGAAAAAGCCTTTCTCCTGCGCTACTTTCTCGGCATAACAAACATCAGCGGCATAATAAACGTCCAGCCCCGGCATTTTATTaa > 6:1412/1‑140 (MQ=255)
ttCGAAGGTTGCCCGCTCAAAGGCGGCATAATGGCGATAACGTGACGTCAGGCGATAGAAAAAGCCTTTCTCCTGCGCTACTTTCTCGGCATAACAAACATCAGCGGCATAATAAACGTCCAGCCCCGGCATTTTATTaa > 1:251903/1‑140 (MQ=255)
ttCGAAGGTTGCCCGCTCAAAGGCGGCATAATGGCGATAACGTGACGTCAGGCGATAGAAAAAGCCTTTCTCCTGCGCTACTTTCTCGGCATAACAAACATCAGCGGCAGAATAACCGTCCAGCCCCGGCATTTTATTaa > 5:894362/1‑140 (MQ=255)
tgcGAATGTTGCCCGCTAAAAGGCGGCATAATGGCGATAACGTGACTTCAGGCGATAGAAAAAGCCTTTCTCCTTCGATACTTTCTCGGCTTAACAAAAATCAGCGGCATAATAAACGTACAGCCCCGGCATTTTATTaa > 8:698170/3‑140 (MQ=255)
cGAAGGTTGCCCGCTCAAAGGCGGCATAATGGCGATAACGTGACGTCAGGCGATAGAAAAAGCCTTTCTCCTGCGCTACTTTCTCGGCATAACAAACATCAGCGGCATAATAAACGTCCAGCCCCGGCATTTTATTaa > 4:931662/1‑138 (MQ=255)
cGAAGGTTGCCCGCTCAAAGGCGGCATAATGGCGATAACGTGACGTCAGGCGATAGAAAAAGCCTTTCTCCTGCGCTACTTTCTCGGCATAACAAACATCAGCGGCATAATAAACGTCCAGCCCCGGCATTTTATTaa > 3:153492/1‑138 (MQ=255)
cGAAGGTTGCCCGCTCAAAGGCGGCATAATGGCGATAACGTGACGTCAGGCGATAGAAAAAGCCTTTCTCCTGCGCTACTTTCTCGGCATAACAAACATCAGCGGCATAATAAACGTCCAGCCCCGGCATTTTATTaa > 3:54427/1‑138 (MQ=255)
cGAAGGTTGCCCGCTCAAAGGCGGCATAATGGAGATAACGTGACGTCAGGCGATAGAAAAAGCCTTTCTCCTGCGCTACTTTCTCGTCATAACAAACATCAGCGGCATAATAAACGTCCAGCCCCGGCATTTTATTaa > 3:1182028/1‑138 (MQ=255)
aGGTTGCCCGCTCAAAGGCGGCATAATGGCGATAACGTGACGTCAGGCGATAGAAAAAGCCTTTCTCCTGCGCTACTTTCTCGGCATAACAAACATCAGCGGCATAATAAACGTCCAGCCCCGGCATTTTATTAAATcaa > 8:352845/1‑138 (MQ=255)
gTTGCCCGCTCAACGGCGGCATAATGGCGATAACGTGACGTCAGGCGATAGAAAAAGCCTTTCTCCTGCGCTACTATCTCGGCATAACAAACATCAGCGGCATAAAAAACGTCCAGCCCCGGCATTTTATTAAATC‑Ca > 4:420972/1‑138 (MQ=255)
gTTGCCCGCTCAAAGGCGGCATAATGGCGATAACGTGACGTCAGGCGATAGAAAAAGCCTTTCTCCTGCGCTACTTTCTCGGCATAACAAACATCAGCGGCATAATAAACGTCCAGCCCCGGCATTTTATTAAATC‑Ca > 3:1271703/1‑138 (MQ=255)
tgccccGCTCAAAGGCGGCATAATGGCTATAACGTGAGGGCTGGCGATACAAAAAGCCTTTAGCCTGCGCTACTTTATCGGCATAACAAACATCAGCGGCATAATAAACGCCCAGCCCCGGCATTTTATTAAATC‑CAACg < 6:68393/137‑1 (MQ=255)
gCCCGCTCAAAGGCGGCATAATGGCGATAACGTGACGTCAGGCGATAGAAAAAGCCTTTCTCCTGCGCTACTTTCTCGGCATAACAAACATCAGGGGCATAATAAACGTCCAGCCCCGGCATTTTATTAAATC‑CAACGAc > 5:1138986/1‑140 (MQ=255)
gCCCGCTCAAAGGCGGCATAATGGCGATAACGTGACGTCAGGCGATAGAAAAAGCCTTTCTCCTGCGCTACTTTCTCGGCATAACAAACATCAGCGGCATAATAAACGTCCAGCCCCGGCATTTTATTAAATC‑CAACGAc > 1:435091/1‑140 (MQ=255)
gCCCGCTCAAAGGCGGCATAATGGCGATAACGTGACGTCAGGCGATAGAAAAAGCCTTTCTCCTGCGCTACTTTCTCGGCATAACAAACATCAGCGGCATAATAAACGTCCAGCCCCGGCATTTTATTAAATC‑CAACGAc > 5:198095/1‑140 (MQ=255)
gCCCGCTCAAAGGCGGCATAATGGCGATAACGTGACGTCAGGCGATAGAAAAAGCCTTTCTCCTGCGCTACTTTCTCGGCATAACAAACATCAGCGGCATAATAAACGTCCAGCCCCGGCATTTTATTAAATC‑CAACGAc > 2:1352958/1‑140 (MQ=255)
gCCCGCTCAAAGGCGGCATAATGGCGATAACGTGACGTCAGGCGATAGAAAAAGCCTTTCTCCTGCGCTACTTTCTCGGCATAACAAACATCAGCGGCATAATAAACGTCCAGCCCCGGCATTTTATTAAATC‑CAACGAc > 8:1017645/1‑140 (MQ=255)
gCCCGCTCAAAGGCGGCATAATGGCGATAACGTGACGTCAGGCGATAGAAAAAGCCGTTCTCCTGCGCTACTTTCTCGGCATAACAAACATCAGCGGCATAAGAAACGTCCAGCCCCGGCATTTTATTAAATC‑CAACGAc > 7:921815/1‑140 (MQ=255)
ccGCTCAAAGGCGGCATAATGGCGATAACGTGACGTCAGGCGATAGAAAAAGCCTTTCTCCTGCGCTACTTTCTCGGCATAACAAAGATCAGCGGCATAATAAACGTCCAGCCCCGGCATTTTATTAAATC‑CAACGAc > 4:963374/1‑138 (MQ=255)
ccGCTCAAAGGCGGCATAATGGCGATAACGTGACGTCAGGCGATAGAAAAAGCCTTTCTCCTGCGCTACTTTCTCGGCATAACAAACATCAGCGGCATAATAAACGTCCAGCCCCGGCATTTTATTAAATC‑CAACGAc > 3:1178056/1‑138 (MQ=255)
cTCAAAGGCGGCATAATGGCGATAACGTGACGTCAGGCGATAGAAAAAGCCTTTCTCCTGCGCTACTTTCTCGGCATAACAAACATCAGCGGCATAATAAACGTCCAGCCCCGGCATTTTATTAAATC‑CAACGACTCTAt > 2:1292202/1‑140 (MQ=255)
tCAAAGGCGGCATAATGGCGATAACGTGACGTCAGGCGATAGAAAAAGCCTTTCTCCTGCGCTACTTTCTCGGCATAACAAACATCAGCGGCATAATAAACGTCCAGCCCCGGCATTTTATTAAATC‑CAACGACTCTATc > 7:8609/1‑140 (MQ=255)
cAAAGGCGGCATAATGGCGATAACGTGACGTCAGGCGATAGAAAAAGCCTTTCTCCTGCGCTACTTTCTCGGCATAACAAACATCAGCGGCATAATAAACGTCCAGCCCCGGCATTTTATTAAATC‑CAACGACTCTAt > 3:444497/1‑138 (MQ=255)
aacggcggcAAAATGGCGAAAAGTGGACGGCCGGCCATAGAAACAGCTTTTCTCCTGCGCTACTTTCTCGCCAAAAAAAACAACAGCGCAAAAAAAACCGCCCCGCCCGGGAATTTTTTTAAACC‑CAACGACTCTATCGa < 6:1032037/137‑1 (MQ=255)
gggcggcATAAGGGCTATAACGTGACGTCAGGCGATATAAAACGCATTTCACCGGCGCTACTTTCTCGGCATAACAACAATCCGCTGAATAATAAACGGCCCGCCCCGGCATTTTATTAACTC‑CAACGACTCTATCGACg < 8:331407/139‑1 (MQ=255)
gcggcATAATGGCGATAACGTGACGTCCGGCGATCTAAAAAGCCTTTCTCCTGCGCTACTTTCTCGGCATAACAAACATCAGCGGCATAATAAACGTCCCGCCCCGTCATTTTATTAAATC‑CAACGACTCTATCGACg < 4:280117/138‑1 (MQ=255)
cATAATGGCGATAACGTGACGTCAGGCGATAGAAAAAGCCTTTCTCCTGCGCTACTTTCTCGGCATAACAAACATCAGCGGCATAATAAACGTCCAGCCCCGGCATTTTATTAAATC‑CAACGACTCTATCGACGGGgtgt > 1:1302189/1‑140 (MQ=255)
cATAATGGCGATAACGTGACGTCAGGCGATAGAAAAAGCCTTTCTCCTGCGCTACTTTCTCGGCATAACAAACATCAGCGGCATAATAAACGTCCAGCCCCGGCATTTTATTAAATC‑CAACGACTCTATCGACGGGgtgt > 1:423987/1‑140 (MQ=255)
aaTAATGGCTATAACGTGACGTCAGGCGATAGAAAACGCCTTTCTCCTGCGCTACTTCCTCGGAATAACAAACATCCGCGGCATAATAACCGCCCCGCCCCGGAATTTTATAAAATC‑CAACGACTCTATCGACGGGgtgt < 7:286337/139‑1 (MQ=255)
aaaaTGGCGATAACGTGACGCATGTCTATACAAAAATCAATTCTCCTGCGCTACTTTCTCGGAATAACAAAAATCACCGGCATAATAAACGTCCAGCCCCGGAATTTTATTAAATC‑CAACGACTCTATCGACGGGGTGtt < 8:736658/138‑1 (MQ=255)
tAATGGCGATAACGTGACGTCAGGCGATAGAAAAAGCCTTTCTCCTGCGCTACTTTCTCGGCATAACAAACATCAGCGGCATAATAAACGTCCAGCCCCGGCATTTTATTAAATC‑CAACGACTCTATCGACGGGgtgt > 3:644911/1‑138 (MQ=255)
taaaaCGTGAGGTCAGCGGATACAAAAACCGTTTCTCCTGCGATAATTTCTCGCAAAAACAAAAATAAGCGGCTAAATAAACGTCCCGCCCCGTTTTTTTTTTAAACC‑CAACGACTCTATCGACGGGGTGTTCACGTaaa < 2:1142295/137‑1 (MQ=255)
taTAACGTGACGGCAGGCGATATAAAACGCCTTTCTCCTGCGATACTTTCTCGGCATAACAAACATCAGCGGCATAATAAACGTCCCGCCCCGGCATTTTATTAAATC‑CCACGACTCTATCGACGGGGTGTTCACGTaaa < 2:980952/139‑1 (MQ=255)
aTAACGTGACGTCAGGCGATAGAAAAAGCCTTTCTCCTGCGCTACTTTCTCGGCATAACAAACATCAGCGGCATAATAAACGTCCAGCCCCGGCATTTTATTAAATC‑CAACGACTCTATCGACGGGGTGTTCACGTAAAt > 7:641056/1‑140 (MQ=255)
aTAACGTGACGTCAGGCGATAGAAAAAGCCTTTCTCCTGCGCTACTTTCTCGGCATAACAAACATCAGCGGCATAATAAACGTCCAGCCCCGGCATTTTATTAAATC‑CAACGACTCTATCGACGGGGTGTTCACGTAAAt > 1:980952/1‑140 (MQ=255)
aTAACGTGACGTCAGGCGATAGAAAAAGCCTTTCTCCTGCGCTACTTTCTCGGCATAACAAACATCAGCGGCATAATAAAAGTCCAGACCCGGCATTTTATTAAATC‑CAACGACTCTATCGACGGGGTGTTCACGTAAAt > 1:586867/1‑140 (MQ=255)
aTAACGTGACGTCAGGCGAGAGAAAAAGCCTTTCTCCTGCGCTACTTTCTCGGCATAACAAACATCAGCGGCATAATAAACGTCCAGCCCCGGCATTTTATTAAATC‑CAACGACTCTATCGACGGGGTGTTCACGTTAAt > 5:157207/1‑140 (MQ=255)
aaCGTGACGTCAGGCGATAGAAAAAGCCTTTCTCCTGCGCTACTTTCTCGGCATAACAAACATCAGCGGCATAATAAACGTCCAGCCCCGGCATTTTATTAAATC‑CAACGACTCTATCGACGGGGTGTTCACGTAAAt > 4:1207249/1‑138 (MQ=255)
cGTGACGTCAGGCGATAGAAAAAGCCTTTCTCCTGCGCTACTTTCTCGGCATAACAAACATCAGCGGCATAATAAACGTCCAGCCCCGGCATTTTATTAAATC‑CAACGACTCTATCGACGGGGTGTTCACGTAAATGttt > 7:79054/1‑140 (MQ=255)
cGTGACGTCAGGCGATAGAAAAAGCCTTTCTCCTGCGCTACTTTCTCGGCATAACAAACATCAGCGGCATAATAAACGTCCAGCCCCGGCATTTTATTAAATC‑CAACGACGCTATCGACGGGGTGTTCACGTAAATGttt > 5:717503/1‑140 (MQ=255)
caCGTCAGGCGATAGAAAAAGCCTTTCTCCTGCGCTACTTTCTCGGCATAACAAACATCAGCGGCATAATAACCTTCCAGCCCCGGCATTTTATAAAATC‑CAACGACTCTATCGACGGGGTGTTCACGTAAATGTTTTTg < 6:1116729/139‑1 (MQ=255)
gCGATAGAAAAAGCCTTTCTCCTGCGCTACTTTCTCGGCATAACAAACATCAGCGGCATAATAAACGTCCAGCCCCGGCATTTTATTAAATC‑CAACGACTCTATCGACGGGGTGTTCACGTAAATGTTTTTGCACCCAgg > 7:1154378/1‑140 (MQ=255)
aaGAAAAATCCTGTCTCCTGCGCTAGTTTCTCGTAATAAAAAACATCAGCGGAATATTAACCGGCCCGCCCGGTAATTTTATACAATC‑CAACTACTCTCTCGACGGGGTGTTCACGTAAATGTTTTTGCACCCAGTCa < 4:1302614/137‑1 (MQ=255)
aaGCATATCTCCTGCGCTACTTTCTCGCCATAACAAACATCCGCGGCAAAAAAAACGACCACCCCCGCAATTTTATTAAAAC‑CAACGACTCTATCGACGGGGTGTTCACGTAAATGTTTTTGCACCCAGGCAAAatat < 4:1271703/138‑1 (MQ=255)
cccTGTCTCCTGCCCTACTTTCTCGCCATAACAAACACCCGCGCAATAAAAAACGTCCCCCCCCGGAATTTTATTAAATC‑CCACGACTCTATCGACGGGGTGTTCACGTAAATGTTTTTGCACCCAGGCAAAATATTc < 3:1100750/137‑1 (MQ=255)
tttCTCATGCGATACTTTATCGGCATAACAAACATCAGCGTCATAAAAACCGTCAAGCCCCGGAATTTTATTAAATC‑CCACGACTCTATCGACGGGGTGTTCACGTAAATGTTTTTGCACCCAGGCAAAATATTCCGCAt < 8:836318/140‑1 (MQ=255)
tctcCTGCGCTACTTTCTCGGCATAACAAACATCAGCGGCATAATAAACGTCCAGCCCCGGCATTTTATTAAATC‑CAACGACTCTATCGACGGGGTGTTAACGTAAATGTTTTTGCACCCAGGCAAAATATTCCGCATTg > 1:1103077/1‑140 (MQ=255)
tcCGGCGCAACTTTCGGGCAATAACAAAATTCTGCGCAAAAATAAACGTCCAGCCCCGGCATTTTATAAAATC‑CCACGACTCTATCGACGGGGTGTTCACGTAAATGTTTTTGCACCCAGGCAAAATATTCCGCATTgcg < 6:456520/140‑1 (MQ=255)
ttGCGCTACTTTCTCGGAATAAAAAACATCAGCTGAATAATAAACGTCCAGCCCCGGAATTTTATTAAATC‑CAACGACTCTATCGACGGGGTGTTCACGTAAATGTTTTTTAAAAAATGCAAAATATTCCGCATTgagac < 8:1258435/139‑5 (MQ=255)
ttGCGCTACTTTCTCGGAAAAACAAACATCAGCGGAATAATAAACGTCCAGCCCCTGCATTTTATAAATAA‑CAACGACTCTATCGACGGGGTGTTCACGTAAATGTTTTTGCACCCAGGCAAAATATTCCGCATTgcg < 3:986042/137‑1 (MQ=255)
ggggcTAATTTCGCGCAATAACAACAATCTGGTGAATTATAACGGTCAAGCCCGGGCATTTTATTAAATC‑CAACGACTCTATCGACGGGGTGTTCACGTAAATGTTTTTGCACCCAGGCAAAATATTCCGCATTGCGccc < 2:790779/137‑1 (MQ=255)
gcccTACTTTCTCGGCATAACAAACATCAGCGGCAAAATAACCGTCCCGCCCGGGCATTTTATTAAATC‑CAACGACTCTATCGACGGGGTGTTCACGTAAATGTTTTTGCACCCAGGCAAAATATTCCGCATTGCGcc < 4:1176210/135‑1 (MQ=255)
cgcTACTTTCTCGGCATAACAAACATCAGCGGCATAATAAACGTCCAGCCCCGGCATTTTATTAAATC‑CAACGACTCTATCGACGGGGTGTTCACGTAAATGTTTTTGCACCCAGGCAAAATATTCCGCATTGCGCCCGt > 6:907325/1‑140 (MQ=255)
gcTACTTTCTCTGCATAACAAACATCAGCGTCATAATAAACGTCCAGCCCCGGCATTTTATTAAATC‑AAACGACTCTATCGACGGGGTGTTCACTATAAAGTATTTGCAGCCAGGCAAAATATTCAGCATTGCGACCg > 4:492911/1‑138 (MQ=255)
caCTGTCTCGGCAAAAAAAACATCCCCGGCATAATAACGGTCCAGCCCCGGATTTTTATTAAATC‑CAACGACTCTATCGACGGGGTTTTCACGTAAATGTTTTTGCACCCAGGCAAAATATTCCGCATTGCGCCCGTGAt < 2:574662/139‑1 (MQ=255)
cTTTCTCGGCATAACAAACATCAGCGGCATAATAAACGTCCAGCCCCGGCATTTTATTAAATC‑CACCGACTCTATCGACGGGGTGTTCACGTAAATGTTTTTGCACCCAGGCAAAATATTCCGCATTGCGCCCGTGATTg > 6:818633/1‑140 (MQ=255)
cTTTCTCGGCATAACAAACATCAGCGGCATAATAAACGTCCAGCCCCGGCATTATATTAAATC‑CAACGACTCTATCGACGTGGTGTTCACGTAAATGTTTTTCCACACAGCCAAAATATTCAGCATTGCGCCCGTGAATg > 1:643927/1‑140 (MQ=255)
tcgcGGAATAAAAAACATCCGCGGCATAATAACCGCCCCGCCCGGGCATTTTATTAAAAC‑CAACGACTCTATCGACGGGGTGTTCACGTAAATGTTTTTGCACCCAGGCAAAATATTCCGCATTGCGCCCGTGATTGGTa < 1:480712/137‑1 (MQ=255)
tcGGCATAACAAACATCAGCGGCATAATAAACGTCCAGCCCCGGCATTTTATTAAATC‑CAACGACTCTATCGACGGGGTGTTCACGTAAATGTTTTTGCACCCAGGCAAAATATTCCGCATTGCGCCCGTGATTGGTATg > 5:973002/1‑140 (MQ=255)
tcGGCATAACAAACATCAGCGGCATAATAAACGTCCAGCCCCGGCATTTTATTAAATC‑CAACGACTCTATCGACGGGGTGTTCACGTAAATGTTTTTGCACCCAGGCAAAATATTCCGCATTGCGCCCGTGATTGGTATg > 2:211615/1‑140 (MQ=255)
accaTCCGCGGCATAATAAACGTCCAGCCCCGGCTTTTTATTAAAGC‑CAACGACTCTATCGACGGGGTGTTCACGTAAATGTTTTTGCACCCAGGCAAAATATTCCGCATTGCGCCCGTGATTGGTATGCGATTTAACCg < 2:354122/138‑1 (MQ=255)
accaTCAGCGTCAAAAAACTCGCCCCGCCCGGCCTTTTTATAAAATC‑CCACGACTCTATCGACTGTGTGTTCACGTAAATGTTTTTGCACCCAGGCAAAATATTCCGCATTGCGCCCGTGATTGGTATGCGATTTAACCg < 1:213898/138‑1 (MQ=255)
accaTCAGCGGCATATAAAACGGCCAGCCCCGGCATTTTATTAAATC‑CCACGACTCTATCGACGGGGTGTTCACGTAAATGTTTTTGCACCCAGGCAAAATATTCCGCATTGCGCCCGTGATTGGTATGCGATTTAACCg < 6:382477/138‑1 (MQ=255)
aacaTCAGCGGCATAATAAACGTCCAGCCCCGGCATTTTATTAAATC‑CAACGACTCTATCGACGGGGTGTTCACGTAAATGTTTTTGCACCCAGGCAAAATATTCCGCATTGCGCCCGTGATTGGTATGCGATTTAAc < 4:54427/138‑1 (MQ=255)
aacaTCAGCGGAATATTAAACGTCCAGCCCCGGAATTTTATTAAATC‑ACACGACTCTATCGACGGGGTGTTCACGTAAATGTTTTTGCACCCAGGCAAAATATTCCGCATTGCGCCCGTGTTTGGTATGCGATTTAACCg < 2:1297558/140‑1 (MQ=255)
aTCAGCGGCATAATAAACGTCCAGCCCCGGCATTTTATTAAATC‑CAACGACTCTATCGACGGGGTGTTCACGTAAATGTTTTTGCACCCAGGCAAAATATTCCGCATTGCGCCCGTGATTGGTATGCGATTTAACCGGCa > 7:341651/1‑140 (MQ=255)
aGCGGCATAATAAACGTCCAGCCCCGGCATTTTATTAAATC‑CAACGACTCTATCGACGGGGTGTTCACGTAAATGTTTTTGCACCCAGGCAAAATATTCCTCATTGCGCCCGTGATTGGTATGCGATTTAACCGGCACtt > 5:1210482/1‑140 (MQ=255)
cGGCATAATAAACGTCCAGCCCCGGCATTTTATTAAATC‑CAACGACTCTATCGACGGGGTGTTCACGTAAATGTTTTTGCACACAGGCAAAATATTACGCATTGCGCCCGTGATTGGTATGCGATTTAACCGGCACTTTg > 1:99537/1‑140 (MQ=255)
gcaaaaataaCAGTCCACCCCCGCAATTTAATTAAAAC‑CAACGACGCTATCGACGGGGTGTTCACGTAAATGTTTTTGCACCCAGGCAAAATATTCCGCATTGCGCCCGTGATTGGTATGCGATTTAACCGGCACTTTGa < 6:423557/135‑1 (MQ=255)
gaataataAACTTCCAGCCCCGGAATTTTATTAATTC‑CAACGACTCTATCGACGGGGTGTTCACGTAAATGTTTTTGCACCCAGGCAAAATATTCCGCATTGCGCCCGTGATTGGTATGCGATTTAACCGGCACTTTGAt < 6:877893/138‑1 (MQ=255)
gCATAATAAACGTCCAGCCCCGGCATTTTATTAAATC‑CAACGACTCTATCGACGGGGTGTTCACGTAAATGTTTTTGCACCCAGGCAAAATATTCCGCATTGCGCCCGTGATTGGTATGCGATTTAACCGGCACTTTGAt < 2:1259456/140‑1 (MQ=255)
gCATAATAAACGTCCAGCCCCGGCATTTTATTAAATC‑CAACGACTCTATCGACGGGGTGTTCACGTAAATGTTATTGCACCCAGGCAAAATATTCCGCATTGCGCCCGTGATTGGTATGCGATTTAACCGTCACTTTg > 3:294609/1‑138 (MQ=255)
ccatcaaaaaCTTCCAGCCCCGGAATTTTATTAAAAC‑CCACGACTCTATCGACGGGGTGTTCACGTAAATGTTGTTGCACCCAGGCAAAATATTCCGCATTGCGCCCGTGATTGGTATGCGATTTAACCGGCACTTTGAt < 8:715830/133‑1 (MQ=255)
ccATAATAAACTCCCCCCCCCGGCATTTAATTAAAAC‑CAACGACTCTATCGACGGGGTGTTCACGTAAATGTTTTTGCACCCAGGCAAAATATTCCGCATTGCGCCCGTGATTGGTATGCGATTTAACCGGCACTTTGAt < 8:585694/139‑1 (MQ=255)
caataataAACGGCCAGCCCCGGAATTTTAATAAAAC‑ACACGACTCTATCGACGGGGTGTTCACGTAAATGTTTTTGCACCCAGGCAAAATATTCCGCATTGCGCCCGTGATTGGTATGCGATTTAACCGGCACTTTGAt < 8:222888/138‑1 (MQ=255)
caaaaaaaaaCGCCCCGCCCCGGCATTTAATAAAACC‑CAACGACTCTATCGACGGGGTGTTCACGTAAATGTTTTTGCACCCAGGCAAAATATTCCGCATTGCGCCCGTGATTGGTATGCGATTTAACCGGCACTTTGAt < 6:52690/133‑1 (MQ=255)
caaaataaACGTCACGCCCCGGCATTTTATAAAACC‑CAACGACTCTATCGACGGGGTGTTCACGTAAATGTTTTTGCACCCAGGCAAAATATTCCGCATTGCGCCCGTGATTGGTATGCGATTTAACCGGCACTTTGATc < 6:716083/137‑1 (MQ=255)
ataaatacAGGTCCTGCCCGGGCTTTTTATTAAATC‑CCACGACTCTATCGACGGGGTGTTCACGTAAATGTTTTTGCACCCAGGCAAAATATTCCGCATTGCGCCCGTGATTGGTATGCGATTTAACCGGCACTTTGATc < 6:1025257/137‑1 (MQ=255)
aataataACGTTCCAGCCCGGGCATTTTATTAAAAC‑CAACGACTCTATCGACGGGGTGTTCACGTAAATGTTTTTGCACCCAGGCAAAATATTCCGCATTGCGCCCGTGATTGGTATGCGATTTAACCGGCACTTTGa < 3:67512/137‑1 (MQ=255)
aataataAACGTCCCGCCCCGGCATTTTATTAAATC‑CCACGACTCTATCGACGGGGTGTTCACGTAAATGTTTTTGCACCCAGGCAAAATATTCCGCATTGCGCCCGTGATTGGTATGCGATTTAACCGGCACTTTGATc < 6:973002/139‑1 (MQ=255)
aataataAACGTCCAGCCCCGTCTTTTTATTAAAAC‑CAACGACTCTATCGACGGGGTGTTCACGTAAATGTTTTTGCACCCAGGCAAAATATTCCGCATTGCGCCCGTGATTGGTATGCGATTTAACCGGCACTTTGa < 3:432879/137‑1 (MQ=255)
aataataAACGTCCACCCCCGGCATTTTATTAAATC‑CAACGACTCTATCGACGGGGTGTTCACGTAAATGTTTTTGCACCCAGGCAAAATATTCCGCATTGCGCCCGTGATTGGTATGCGATTTAACCGGCACTTTGATc < 2:818778/139‑1 (MQ=255)
aataataAACGTCAAGCCCCGGCTTTTTATTATATC‑CCACGACTCTATCGACGGGGTGTTCACGTAAATGTTTTTGCACCCAGGCAAAATATTCCGCATTGCGCCCGTGATTGGTATGCGATTTAACCGGCACTTTGATc < 5:651826/139‑1 (MQ=255)
aataaaaCACGACCACCCCCGCCATTTTAATAAAAC‑CCACGACTCTATCGACGGGGTGTTCACGTAAATGTTTTTGCACCCAGGCAAAATATTCCGCATTGCGCCCGTGATTGGTATGCGATTTAACCGGCACTTTGa < 3:359309/137‑1 (MQ=255)
aaaaataaACGTCCAGCCCC‑GTATTTTTATAAATCACAACGACTCTATCGACGGGGTGTTCACGTAAATGTTTTTGCACCCAGGCAAAATATTCCGCATTGCGCCCGTGATTGGTATGCGATTTAACCGGCACTTTGATc < 1:1167376/137‑1 (MQ=255)
aaaaaaaCGTCCACCCCCGGCATTTTATTAAATC‑CAACGACTCTATCGACGGGGTGTTCACGTAAATGTTTTTGCACCCAGGCAAAATATTCCGCATTGCGCCCGTGATTGGTATGCGATTTAACCGGCACTTTGATCAg < 7:45578/136‑1 (MQ=255)
aataaACGTCCAGCCCCGGCATTTTATTAAATC‑CAACGACTCTATCGACGGGGTGTTCACGTAAATGTTTTTGCACCCAGGCAAAATATTCCGCATTGCGCCCGTGATTGGTATGCGATTTAACCGGCACTTTGATCAGt < 8:920678/140‑1 (MQ=255)
aaaaaaCGTCCCGCCCCCGCTTTTTATTAATAC‑CAACGAATCTATCGACGGGGTGTTCACGTAAATGTTTTTGCACCCAGGCAAAATATTCCGCATTGCGCCCGTGATTGGTATGCGATTTAACCGGCACTTTGATCAGt < 1:820697/137‑1 (MQ=255)
aCGTCCAGCCCCGGCATTTTATTAACTC‑CAACGACTCTATCGACGGGGTGTTCACGTAAATGTTTTTGCACCCAGGCAAAATATTCCGCATTGCGCCCGTGATTGGTATGCGATTTAACCGGCACTTTGATCAGTTCaaa < 6:838312/140‑1 (MQ=255)
aCGACCAGCCCCGGCATTTTATTAAATC‑CAACGACTCTATCGACGGGGTGTTCACGTAAATGTTTTTGCACCCAGGCAAAATATTCCGCATTGCGCCCGTGATTGGTATGCGATTTAACCGGCACTTTGATCAGTTCaaa < 6:646041/140‑1 (MQ=255)
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AGCAGCTGTGTCGGCTTGCCCTGTTCGAAGGTTGCCCGCTCAAAGGCGGCATAATGGCGATAACGTGACGTCAGGCGATAGAAAAAGCCTTTCTCCTGCGCTACTTTCTCGGCATAACAAACATCAGCGGCATAATAAACGTCCAGCCCCGGCATTTTATTAAATC‑CAACGACTCTATCGACGGGGTGTTCACGTAAATGTTTTTGCACCCAGGCAAAATATTCCGCATTGCGCCCGTGATTGGTATGCGATTTAACCGGCACTTTGATCAGTTCAAA > NZ_CP022686/2546256‑2546533
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| Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
N/A
