Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A8 F35 I0 R1
|
304 |
9232.4 |
10623078 |
98.3% |
10442485 |
135.6 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
freq |
annotation |
gene |
description |
| RA |
NZ_CP022686 |
4,014,242 |
A→T |
10.5% |
intergenic (+88/‑256) |
bolA → / → tig |
transcriptional regulator BolA/trigger factor |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NZ_CP022686 | 4,014,242 | 0 | A | T | 10.5%
| 333.1
/ 6.6
| 181 | intergenic (+88/‑256) | bolA/tig | transcriptional regulator BolA/trigger factor |
| Reads supporting (aligned to +/- strand): ref base A (76/81); new base T (13/7); total (93/88) |
| Fisher's exact test for biased strand distribution p-value = 2.35e-01 |
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 |
Only 100 of 183 total aligned reads displayed.
CACCGTCTTTGCCTCTCCTCCCTGTCGTGGAGCAGGAAGCATCGCGTAAAAACGCATTTGCAACTGTCGGCGCTTTTCCAGTATGTTGCTAAAGATTTTATGAAAAACGGCCTGCGGGCCGTTTTGTTTTGTCTGGATTTTGCGCTTTTTGCCCAGCATTCAGACGAAAATCGCCCGGGAATTGTGAAAAAATACGCGACAGCGCGCAATAACCGTTCTCGACTCATAAAAGTGATGCCGCTATAATGCCGCGTCCTATTTGAATGCTTTCGGGAT > NZ_CP022686/4014106‑4014381
|
cacCGTCTTTGCCTCTCCTCCCTGTCGTGGAGCAGGAAGCATCGCGTAAAAACGCATTTGCAACTGTCGGCGCTTTTCCAGTATGTTGCTAAAGATTTTATGAAAAACGGCCTGCGGGCCGTGTTTTTTTGTGTGGAttt > 1:751599/1‑140 (MQ=255)
acCGTCTTTGCCTCTCCTCCCTGTCGTGGAGCAGGAAGCATCGCGTAAAAACGCAATTGCAACTGTCGGCGCTTTTCCAGTATGTTGCTAAAGATTTTATGAAAAACGGCCTGCGGGCCGTTTTGTTTTGGATGGAtttt > 7:1005644/1‑140 (MQ=255)
cGTCTTTGCCTCTCCTCCCTGTCGTGGAGCAGGAAGCATCGCGTAAAAACGCATTTGCAACTGTCGGCGCTTTTCCAGTATGTTGCTAAAGATTTTATGAAAAACGGCCTGCGGGCCTGGTTTTTTTGTCTTGTTTTTgg > 1:1110037/1‑139 (MQ=255)
cGTCTTTGCCTCTCCTCCCTGTCGTGGAGCAGGAAGCATCGCGTAAAAACGCATTTGCAACTGTCGGCGCTTTTCCAGTATGTTGCTAAAGATTTTATGAAAAACGGCCTGCGGGCCGTTTTGTTTTGTCTGGATTTTgc > 5:547356/1‑140 (MQ=255)
cGTCTTTGCCTCTCCTCCCTGTCGTGGAGCAGGAAGCATCGCGTAAAAACGCATTTGCAACTGTCGGCGCTTTTCCAGTATGTTGCTAAAGATTTTATGAAAAACGGCCTGCGGGCCGTTTTGTTTTGTCTGGATTTTgc < 5:885794/140‑1 (MQ=255)
tctcCTCCCTGTCGTGGAGCAGGAAGCATCGCGTAAAAACGCATTTGCAACTGTCGGCGCTTTTCCAGTATGTTGCTAAAGATTTTATGAAAAACGGCCTGCGGGCCGTTTTGTTTTGTCTGGATTTTGCGCTTTTTGcc < 7:271510/140‑1 (MQ=255)
tctcCTCCCTGTCGTGGAGCAGGAAGCATCGCGTAAAAACGCATTTGCAACTGTCGGCGCTTTTCCAGTATGTTGCTAAAGATTTTATGAAAAACGGCCTGCGGGCCGTTTTGTTTTGTCTGGATTTTGCGCTTTTTGcc < 2:110649/140‑1 (MQ=255)
tctcCTACCTGTCGTGGAGCAGGAAGCCTAGCGTAAAAACCCATTAGCAACAGTCGGCGCGTTTACAGTATGTTTCTAAACATTTTATGAAAAACGGCCAGCGGGCCGTTTTGTTTTGTCTGGATTTTGCGGTGTTTgac > 8:863387/1‑138 (MQ=255)
tcctccCTGTCGTGGAGCAGGAAGCATCGCGTAAAAACGCATTTGCAACTGTCGGCGCTTTTCCAGTATTTTGCTAAAGATTTTATGAAAAACGGCCTGCGGGCCGTTTTGTTTTGTCTGTATTTTGCGCATTTTggaca > 2:806991/1‑136 (MQ=255)
tcctccCTGTCGTGGAGCAGGAAGCATCGCGTAAAAACGCATTTGCAACTGTCGGCGCTTTTCCAGTATGTTGCTAAAGATTTTATGAAAAACGGCCTGCGGGCCGTTTTGTTTTTTGTGGATTTTGCGCTTTTTGGCCa > 5:65870/1‑140 (MQ=255)
tcctccCTGTCGTGGAGCAGGAAGCATCGCGTAAAAACGCATTTGCAACTGTCGGCGCTTTTCCAGTATGTTGCTAAAGATTTTATGAAAAACGGCCTGCGGGCCGTTTTGTTTTTTATGGATTTTTCGCgtttttaccc > 1:139873/1‑135 (MQ=255)
tcctccCTGTCGTGGAGCAGGAAGCATCGCGTAAAAACGCATTTGCAACTGTCGGCGCTTTTCCAGTATGTTGCTAAAGATTTTATGAAAAACGGCCTGCGGGCCGTTTTGTTTTGTCTGGATTTTGCGGGTTTTGCCCa > 8:394007/1‑140 (MQ=255)
tcctccCTGTCGTGGAGCAGGAAGCATCGCGTAAAAACGCATTTGCAACTGTCGGCGCTTTTCCAGTATGTTGCTAAAGATTTTATGAAAAACGGCCTGCGGGCCGTTTTGTTTTGTCTGGATTTTGAGCTTTTTGCCCa > 6:778228/1‑140 (MQ=255)
tcctccCTGTCGTGGAGCAGGAAGCATCGCGTAAAAACGCATTTGCAACTGTCGGCGCTTTTCCAGTATGTTGCTAAAGATTTTATGAAAAACGGCCTGCGGGCCGTGTTGTTTTTTCTGGATTTTGCGCTTTTTGcccc > 5:1148754/1‑139 (MQ=255)
tcctccCTGTCGTGGAGCAGGAAGCATCGCGTAAAAACGCATTTGCAACTGTCGGCGCTTTTCCAGTATGTTGCTAAAGATTTTATGAAAAACGGCCTGCGGGCCGTGTTGTTTTGTGTGGGTTTTGCGCTTTTTGCCCa > 7:3652/1‑140 (MQ=255)
tcctccCTGTCGTGGAGCAGGAAGCATCGCGTAAAAACGCATTTGCAACTGTCGGCGCTTTTCCAGGATGTTGCTAAAGATTTTATTAAAAACGTACTGCGGGCCGTTTTGTTTTGTGGGGATTTTGGGCTTTTTTcccc > 5:324524/1‑139 (MQ=255)
ctccCTGTCGTGGAGCAGGAAGCATCGCGTAAAAACGCATTTGCAACTGTCGGCGCTTTTCCAGTATGTTGCTAAAGATTTTATGAAAAACGGCCTGCGGGCCGTTTTGTTTTGTCTGGATTTTGCGCTTTTTGCCCa > 4:931935/1‑138 (MQ=255)
ccTGTCGTGGAGCAGGAAGCATCGCGTAAAAACGCATTTGCAACTGTCGGCGCTTTTCCAGTATGTTGCTAAAGATTTTATGAAAAACGGCCTGCGGGCCGTTTTGTTTTGTCTGGATTTTGCGCTTTTTGCCCAGCAtt < 5:903372/140‑1 (MQ=255)
cTGTCGTGGAGCAGGAAGCATCGCGTAAAAACGAATTTGCAACTGTCGGCGCTTTTCCAGTATGTTGCTAAAGATTTTATGAAAAACGGCCTGCGGGCCGTTTTGTTTTTGGGGGATTTTTCGCTGTTTGCGcatcat > 3:123576/1‑138 (MQ=255)
gAGCAGGAAGCATCGCGTAAAAACGCATTTGCAACTGTCGGCGCTTTTCCAGTATGTTGCTAAAGATTTTATGAAAAACGGCCTGCGGGCCGTGTTGTTTTGTCGGGATTTTGCGGTTTTTGACCAGCATTAAGAcca > 4:845886/1‑136 (MQ=255)
gAGCAGGAAGCATCGCGAAAAAACGCATTATCAACTCTCGGCGCTTTTCCAGTATGTTGCTAAAGATATTATTAAAAACGGCCTGCGGGCCGTGTTGTTTTGTCAGTATTTTGAGCAATTTGACCAAAAATAAGACGa > 3:994518/1‑138 (MQ=255)
aGCAGGAAGCATCGCGTAAAAACGCATTTGCAACTGTCGGCGCTTTTCCAGTATGTTGCTAAAGATTTTATGAAAAACGGCCTGCGGGCCGTTTTGGTTTGTCTGGATTTTGCGCTTTTTGCCCAGCAATAAGACGaaaa > 7:268304/1‑140 (MQ=255)
ccAGGAAGCATCGCGTAAAAACGCATTTGCACCTGGCGGCGCTTTTCCAGTATGTTGCTAAACATTTTATGAAAAACGGCCTGCGGGCCGTTTTGTTTTGTCTGGATTTTGCGCTTTTTGCCCAGCATTCAGACGAAAAt < 7:343521/139‑1 (MQ=255)
cAGGAAGCATCGCGTAAAAACGCATTTGCAACTGTCGGCGCTTTTCCAGTATGTTGCTAAAGATTTTATGAAAAACGGCCTGCGGGCCGTTTTGTTTTGTCTGGATTTTGCGCTTTTTGCCCAGCATTCAGACGAAAAta > 5:720937/1‑139 (MQ=255)
cAGGAAGCATCGCGTAAAAACGCATTTGCAACTGTCGGCGCTTTTCCAGTATGTTGCTAAAGATTTTATGAAAAACGGCCTGCGGGCCGTGTTGTTTTGGGTGGTTTTTGGGCGTTTTGGCCAGCATTAAGACGCAAAta > 1:723621/1‑139 (MQ=255)
ggAAGCATCGCGTAAAAACGCATTTGCAACTGTCGGCGCTTTTCCAGTATGTTGCTTAAGATTTTATGAAAAACGTCCTGCGGGCCGTGTTGTTTTGTGTGGTTTTTGCGCATTTTGGGCAGGCTTGCGACGAAAATCGc > 5:863034/1‑140 (MQ=255)
ggAAGCATCGCGTAAAAACGCATTTGCAACTGTCGGCGCGTTTCCAGTATGTTGCTAAAGATTTTATCAAAAACGGCCTGCGGGCCGTGTTGTTTTGGCTGGTTTTTTCGCTTTTTGCCCAGCCTTCCGACGCAAATGGc > 1:449234/1‑140 (MQ=255)
aaGCATCGCGTAAAAACGCATTTGCAACTGTCGGCGCTTTTCCAGTATGTTGCTAAAGATTTTATGAAAAACGGCCTGCGGGCCGTTTTGTTTTGTCTGGATTTTGCGGGTTTTGCCCATCATTCAGCCGAAAATccc > 3:56400/1‑136 (MQ=255)
aaGCATCGCGTAAAAACGCATTTGCAACTGTCGGCGCTTTTCCAGTATGTTGCTAAAGATTTTATGAAAAACGGCCTGCGGGCCGTGTTGTTTTGTCTGGATTTTTCGCTTTTTGCCCCGCATTCAGACGAAAATCGccc > 5:1165696/1‑140 (MQ=255)
aTCGCGTAAAAACGCATTTGCAACTGTCGGCGCTTTTCCAGTATGTTGCTAAAGATTTTATGAAAAACGGCCTGCGGGCCGTTTTGTTTTGTCTGGATTTTTCGCTTTTTGCCCAGCATTCAGACGAAAATCGCCCGGGa > 2:245011/1‑140 (MQ=255)
aTCGCGTAAAAACGCATTTGCAACTGTCGGCGCTTTTCCAGTATGTTGCTAAAGATTTTATGAAAAACGGCCTGCGGGCCGTTTTGTTTTGTCTGGATTTTGCGCTTTTTGCCCAGCATTCAGCCGAAAATCGCCCgggc > 2:669201/1‑139 (MQ=255)
aTCGCGTAAAAACGCATTTGCAACTGTCGGCGCTTTTCCAGTATGTTGCTAAAGATTTTATGAAAAACGGCCTGCGGGCCGTTTTGTTTTGTCTGGATTTTGCGCTTTTTGCCCAGCATTCAGACGAAAATCGCCCGGGa > 8:425374/1‑140 (MQ=255)
aTCGCGTAAAAACGCATTTGCAACTGTCGGCGCTTTTCCAGTATGTTGCTAAAGATTTTATGAAAAACGGCCTGCGGGCCGTTTTGTTTTGGCTTGATTTTGCGCGTTTTGCCCAGCATTCAGACGAAAATCGCCCgggt > 8:1178245/1‑139 (MQ=255)
tggcgTAAAAACGAATTTGCAACTGTCGGCGCGTTTCCAGTTTGTTGCTAAAGATTTTATGAAAAACGGCCTGAGGGCCGTTTTGTTTTGTCTGGATTTTGCGCTTTTTGCCCAGCATTCAGACGAAAATCGCCCGGGaa < 7:787168/138‑1 (MQ=255)
cgcgTAAAAACGCATTTGCAACTGTCGGCGCTTTTCCAGTATGTTGCTAAAGATTTTATGAAAAACGGCCTGCGGGCCGTTTTGTTTTGTCTGGATTTTGGGCTTTTTGCCCAGCATTCAGACGAAAATCGCCCGGGa > 4:219318/1‑138 (MQ=255)
cgcgTAAAAACGCATTTGCAACTGTCGGCGCTTTTCCAGTATGTTGCTAAAGATTTTATGAAAAACGGCCTGCGGGCCGTGTTGTTTTGGCTGGATTTTGCGCTGTTTGCCCAGCATTCAGACGAAAATCGCCCgggt > 4:1064119/1‑137 (MQ=255)
cgTAAAAACGCATTTGCAACTGTCGGCGCTTTTCCAGTATGTTGCTAAAGATTTTATGAAAAACGGCCTGCGGGCCGTTTTGTTTTTTCTGGATTTTGCGCGTTTTTCCCCGCATTCAGGCGAAAATCGGCCGGGAAttt > 6:1245323/1‑139 (MQ=255)
cgTAAAAACGCATTTGCAACTGTCGGCGCTTTTCCAGTATGTTGCTAAAGATTTTATGAAAAACGGCCTGCGGGCCGTGTTGTTTTGTCTGGATTTTGGGCGTTTTGCCCAGCATTCAGACGAAAATCGCCCGGGAAttt > 7:438943/1‑139 (MQ=255)
cgTAAAAACGCATTTGCAACTGTCGGCGCTTTTCCAGTATGTTGCTAAAGATTTTATGAAAAACGGCCTGCGGGCCGTGGTGTTTTGGCTGGATTTTGCGGGTTTTGCCCCGCATTCAGACGAAAATCGCACGGGAATtg > 7:385342/1‑140 (MQ=255)
gTAAAAACGCATTTGCAACTGTCGGCGCTTTTCCAGTATGTTGCTAAAGATTTTATGAAAAACGGCCTGCGGGCCGTTTTGTTTTGTCTGGATTTTGCGCTTTTTGCCCAGCATTCAGACGAAAATCGCCCGGGAAtt < 3:1148559/138‑1 (MQ=255)
aaaCGCATTTGCAACTGTCGGCGCTTTACCAGTTTGTTGATAAAGATTTTATGAAAAACGGCCGGCGGGCCGTTTTGTTTTGTCTGGATTTTGCGCTTTTTGCCCAGCATGCAGACGAAAATCGCCCGGGAATTGTGaaa < 2:798321/140‑1 (MQ=255)
aTTTGCAACTGTCGGCGCTTTTCCAGTATGTTGCTAAAGATTTTATGAAAAACGGCCTGCGGGCCGTGTTGTTTTGTCTGGATTTTGCGCTTTTTGCCCAGCATTCAGCCGAAAATCGCCCGGGAATTGTGAAAAAATAc > 8:162968/1‑140 (MQ=255)
aCTGGCGGCGATTTTCCATTATTTTGATAAAGATTTTATCAAAAACGGCCTGCGGGCCGTTTTGTTTTGTCTGGATTTTGCGCTTTTTGCCCAGCATTCACACTAAAATCGCCCGGGAATTGTTAAAAAATACGCGACAg < 6:732287/140‑1 (MQ=255)
tggcGGCGCTTTTCCAGTATTTTGCTAAAGATTTTATCAAAAACGGCCGGCGGGCCGTTTTGTTTTGTCTGGATTTTGCGCTTTTTCCCCAGCATTCAGACTAAAATCGCCCGGGAATTGTTAAAAAATACGCGACAgcg < 1:1239726/137‑1 (MQ=255)
tggcGGCGCTTTTCCAGTATGTTGCTAAATATATTATCAAAACCGGCCTGCGGGCCGTTTTGTTTTGTCTGGATTTTGCGCTTTTTGCCCAGCATTCAGACGAAAAGCGCCCGGTAATTGTGAAAAAATACGCGACAgcg < 1:1093613/137‑1 (MQ=255)
tggcGGCGCTCTTCCAGTAGGTGGCAAAAGCTGTAATCAAACACGCCCTGCGGGCCGTTTTGTTTTGACTGGATTTTGCGCTATTTGCCCACCATTCAGACGAAAATCGCCCGGTAATTGTCAAAAAAAACGCGACAgcg < 2:1346532/137‑1 (MQ=255)
tGTCGGCTCTTTTCCATTATTTTGCTAAATATTTTTTTAAAACCGGCCTGCGGGCCGTTTTGTTTTGTCTGGATTTTGCGCTTTTTGCCCAGCATTCAGACGAAAATCGCCCGGGAATTGTGAAAAAATACGCGACAgcg < 8:1258046/140‑1 (MQ=255)
tGTCGGCGCTTTACCAGTATGTTGATAAAGTTTTTATGAAAACCGGCCTGCGGGGCGTTTTGTTTTGTCTGGATTTTGCGCTTTTTCCCCAGCATACAGCCTAAATTCGCCCGGGAATCGTTAAAAAATACGCGACAgcg < 6:1056328/140‑1 (MQ=255)
agTCGGCGCTTTTCCAGTTTTGTGATAAAGTTATTATTAAAAACGGCCTGCGGGCCGTTTTTTTTTGTCTGTATTTTGCGCTTTTTGCCCAGCATTCAGACGAAAATCGCCCGGGAATTGTCAAAAAATACGCGACAgcg < 7:916065/139‑1 (MQ=255)
cGGCGCTTTTCCAGTATGTTGCTAAAGAATTTATGAAAAACGGCCTGCGGGCCGTTTTGTTTTGTGTGGTTATTCCGCTTTTTGACCCTAAATCAGACGAAAATAGACCGGGAAGTGTTTAAAAATTCGCCACAgcgcgg > 7:1150539/1‑139 (MQ=255)
ggCGCTTTTCCAGTATGTTGCTACAGATTTTATGAAAACCGGCCTGCGGGCCGTTTTGTTTTGGCTGGATTTTGCGCTTTTCGCCCAGCATTCCGACGAAAATCGCCCGGGAATTGTGAAAAAATACGCGACAgcgcg < 4:725037/138‑1 (MQ=255)
tttttCCAGTATGTTGCTAAAGATTTTATGAAAAACGGCCTGGGGGCGGTTTTGTTTTGTCTGGATTTTGCGCTTTTTGCCCAGCATTCAGACGAAAATCGCCCGGGAATTGTGAAAAAATACGCGACAGCGCGCAAt < 4:278850/137‑1 (MQ=255)
gttttCCAGTATGTTGATAATGATTTTATGAAAAACGGCCTGCGGGCCGTTTTGTTTTGTCTGGATTTTGCGCTTTTTGCCCAGCATTCAGACGAAAATCGCCCGGGAATTGTGAAAAAATACGCGACAGCGCGCAATaa < 8:227016/139‑1 (MQ=255)
tttaCCAGTATGTTGATAAATATTTAATCAAAACCGGCCGGGGGGCGGTTTTTTTTTGTGTGTATTTTGCGCTTTTTGCCCCTCATTCAGACTAAAATCGCCGGGCAATTGTGAAAAAATACGCGACAGCGCGCAATAAc < 6:9062/140‑1 (MQ=255)
tATGTTGCTAAAGTTTTTATGAAAAACGGCCTGCGGGCCGTTTTGTTTTGTCTGGATTTTGCGCTTTTTGCCCAGCATTCAGACGAAAATCGCCCGGGAATTGTGAAAAAATACGCGACAGCGCGCAATAACCGTtct < 4:467221/138‑1 (MQ=255)
tATGTTGCTAAAGATTTTATGAAAACCGGCCTGCGGGCCGTTTTGTTTTGTCTGGATTTTGCGCTTTTTGCCCAGCATTCAGACGAAAATCGCCCGGGAATTGTGAAAAAATACGCGACAGCGCGCAATAACCGTtct < 4:739958/138‑1 (MQ=255)
tttttGATAAATATTTTTTTAAAAACGGCCGGCGGGCGGTTTTTTTTTGTCTGTATTTTGCGCTTTTTGCCCAGAATTCAGACGAAAATCGCCCGGTAATTGTGAAAAAATACGCGACAGCGCGCAATAACCGTTCTCGa < 5:111224/137‑1 (MQ=255)
tttGTTAATGATTTTATTAAAAAGGGCATGTGGGCCGTTTTGTTTTTTGTGGATTTTGCGCTTTTTGCCCAGCATTCAGACGAAAATCGCCCGGTAATTGTTAAAAAATACGCGACAGCGCGCAATAACCGTTCTCGa < 4:1111877/137‑1 (MQ=255)
gTTGCTAAAGAATTTAAGAAAAACGGCCCGCGGGCCTTTTTGTTTTGTCGGGATTTTGAGATTTTAGCACAGCATTCAGCCGAAAATCGCCCGGGAATTGTCAAAAAATACGCGACAGCGCGCAATAACCGTTCTCGACt < 2:916232/140‑1 (MQ=255)
ttGCTAAAGATTTTATGAAAAACGGCCTGCGGGCCGTTTTTTTTTGTGTGGATTTTGCGCTTTTTGCCAAGCATTCAGACGAAAATCGCCCGGGAATTTTGAAAAAATACGCGACAACGCGCAATAACCGTTCTCGACTc > 1:961869/1‑140 (MQ=255)
gCTAAATATTTTATGAAAAACGGAGGGCGGGCCGTTTTGTTTTGTCGGGATTTTGCGCTTTTTGCCCTGCATTCAGACGAAAATCGCCCGGGAATTGTGAAAAAATACGCGACAGCGCGCAATAACCGTTCTCGACTCAt < 2:321432/140‑1 (MQ=255)
aaaGATTTTATGAAAAACGGCCTGCGGGCCGTTGTGTTTTGTATGGATTTTGCGCTTTTTGGCCAGCATTCAGACGAAAATCGCCCGGGAATTGTGAAAAAATACGCGACAGCGCGCAATAACCGTTAGCGACTCaga > 4:1238533/1‑136 (MQ=255)
gATTTTATGAAAAACGGCCTGCGGGCCGTTTTGTTTTGTCTGGATTTTGCGCTTTTTGCCCAGCATCCAGACGAAAATCGCCCGGGAATTGTGAAAAAATTCGCGACAGCGCGCAATAACCGGTCTCGACTCAGaaaa > 3:752364/1‑138 (MQ=255)
gATTTTATGAAAAACGGCCTGCGGGCCGTTTTGTTTTGTCTGGATTATGCGCTTTTTGCCCAGAATTAAGACGAAAATAGCCCGGGAATAGTGAAAAAAAACACCACAGCGCGCAATAACCGTTCTCGACTCATaaaa > 4:66275/1‑138 (MQ=255)
ttttaaaaaCGGCCTGCGGGACGTTTTGTTTTGTCTGGATTTTGCGCTTTTTGCCCAGCATTCAGACGAAAATCGCCCGGGAATTGTGAAAAAATACGCGACAGCGCGCAATAACCGTTCTCGACTCATAAAAGTGAt < 4:56400/134‑1 (MQ=255)
tagtaaaaaGGGCGTCCGGGTCTTTTTGTTTTTTATGGATTTTGCGCTTTTTCCCCCTCCTTCAGACGAAATTCCCCCGGTAATTGGTAAAAAATCCGCGACAGCGCGCAATAACCGTTCTCGACTCATAAAAGTGATGc < 6:1119357/136‑1 (MQ=255)
tATTAAAACAGGCCTGCGGGCCGTTTTTTTTTGTAGGTATTTTGCTCTTTTTGACCAGCATTCATACGAAAATCGCCGGGGATTTTTGAAAAAATAAGCGACAGCGCGCAATAACCGTTCTCGACTCATAAAAGTGATGc < 7:436831/140‑1 (MQ=255)
tATTAAAAACGGCCTGCGGGCCTTTTTGTTTTGTCTGTTTTTTGCGCTTTTTGCCAAGAATTCATTCGAAAATCGCCCGGTAATTGTGTAAAAATCCGCGACAGCGCGCAATAACCGTTCTCGACTCATAAAAGTGATGc < 8:25749/140‑1 (MQ=255)
tATGAGAAACGGCCTGCGGGCCGTTTTGTTTTGTCTGGATTTTGCGCTTTTTGCCCAGCATTCAGACGAAAATCGCCCGGGAATTGTGAAAAAATACGCGACAGCGCGCAATAACCGTTCTCGACTCATAAAAGTGATGc > 7:399625/1‑140 (MQ=255)
tATGAAACACGGCCTGCGGGCGTTTTTTTTTTGTCTGCATTTTGCGCTTATGCCCCAGCATTCTGACGAAATTGGCCCTTTTTTTGTCAAAAAATACGCGACAGCGCGCAATAACCGTTCTCGACTCATAAAAGTGATGc < 7:1046110/140‑1 (MQ=255)
tATGAAAACCGGCCTGCGGGCCGTTTTGTTTTGTCTGGATTTTGCGCTTTTTGCCCAGCATTCCGACGAAAATCGCCCGGGAATTGTGAAAAAATACGCGACAGCGCGCAATAACCGTTCTCGACTCATAAAAGTGATGc < 8:972773/140‑1 (MQ=255)
tATGAAAAACGGCCTGCGGGCCTTTTTGTTTTGTCTGTATTTTGCGCTTTTTCCCAACAATTCAGACTAAAATCGCCCGGTAATTGTTAAAAAATACGCGACAGCGCGCAATAACCGTTCTCGACTCATAAAAGTGATGc < 6:1148000/140‑1 (MQ=255)
tATGAAAAACGGCCTGCGGGCCGTTTTGTTTTGTCTGGATTTTGCGGTTTTTGCCCAGCATTGAGACGAAAATCGCCCGGGAATTGTGAAAAAATACGCGACCGCGCGCAATAACCGTTCTCGACTCAGAAAAGGGCTGc > 6:554679/1‑140 (MQ=255)
tATGAAAAACGGCCTGCGGGCCGTTTTGTTTTGTCTGGATTTTGCGCTTTTTGCCCAGCATTCAGACGAAAATCGCCCGGGAATTGTGAAAAAATACGCGACAGCGCGCAATAACCGTTCTCGACTCATAAAAGTGATGc < 1:284398/140‑1 (MQ=255)
tATGAAAAACGGCCTGCGGGCCGTTTTGTTTTGTCTGGATTTTGCGCTTTTTGCCCAGCATTCAGACGAAAATCGCCCGGGAATTGTGAAAAAATACGCGACAGCGCGCAATAACCGTTCTCGACTCATAAAAGTGATGc > 6:409068/1‑140 (MQ=255)
tATGAAAAACGGCCTGCGGGCCGTGTTGTTTTGTCTGGGTTTTGCGGTTTTTGCCCAGCATTCAGACGCAAATCGCCCGGGCATTGTGAAAAAATACGCGACAGCGCGCAATTACCGTTCTCGCCGCATAAAAGTGATGc > 7:865018/1‑140 (MQ=255)
tATGAAAAACGCCCTGCGGGCCGTTTTGTTTTGTCTGGATTTTGCGCTTTTTCCCCAGCATTCAGACGAAAATCGCCCGGGAATTGTTAAAAAATACGCGACAGCGCGCAATAACCGTTCTCGACTCATAAAAGTGATGc < 8:720370/140‑1 (MQ=255)
aattaaaacCGGCCGGCGGGCGGTTTTGTTTTGTCTGGTTTTTTCGAGTTTGGCCCAGCATTCAGACGAAAATCGCCCGGTAATTGTCAAAAAATACGCGACAGCGCGCAATAACCGTTCTCGACTCATAAAAGTGATGc < 7:723663/136‑1 (MQ=255)
ttaaaaaCGGCCTGCGGGCCGTTTTGTTTTGTCTGGATTTTGCGCTTTTTGCCCAGAATTCATACTAAAATCGCCCGGGAATTGTGAAAAAATACGCGACAGCGCGCAATAACCGTTCTCGACTCATAAAAGTGATGc < 3:839052/136‑1 (MQ=255)
tGAAAAACGGCCTGCGGGCCTTTTTGTTTTGTCTGGATTTTGCGCTTTTTGCCCAGCATTCAGACGAAAATCGCCCGGTAATTGTGAAAAAATACGCGACAGCGCGCAATAACCGTTCTCGACTCATAAAAGTGATGc < 3:49531/138‑1 (MQ=255)
aaCGGCCTGCGGGCCGTTTTGTTTTGTCTGGATTTTGCGCTTTTTGCCCAGCATTCAGACTAAAATCGCCCGGTAATTGTGAAAAAATACGCGACAGCGCGCAATAACCGTTCTCGACTCATAAAAGTGATGCCGCta < 3:300312/138‑1 (MQ=255)
gCCTGCGGGCCGTTTTGTTTTGTCTGTATTTTGCGCTTTTTGCCCAGAATTCAGACGAAAATAGCCCGGGAATTGTGAAAAAATACGCGACAGCGCGCAATAACCGTTCTCGACTCATAAAAGTGATGCCGCTATAATGc < 5:16410/140‑1 (MQ=255)
tttcGGGCCGTTTTTTTTTGACTGGATTTTGCGCTTTTTGCCCTGCATTCATACGAAAATCGCCCGGTAATTGTGAAAAAATCCGCGACAGCGCGCAATAACCGTTCTCGACTCATAAAAGTGATGCCGCTATAATGCcg < 6:784452/137‑1 (MQ=255)
gggggCCGTTTTGTTTTGTCTGGATTTTCCGCTTTTTCCCCAGCATCCAGACTAAACTCGCCCGGTAATTGTTAAAAAAACCGCGACAGCGCGCAATAACCGTTCTCGACTCATAAAAGTGATGCCGCTATAATGCcgcg < 1:931716/138‑1 (MQ=255)
gcgggcggTTTTGTTTTGTCTGGATTTTGCGCTTTTTGCCCAGCATTCAGACGAAAATCGCCCGGGAATTGTGAAAAAATACGCGACAGCGCGCAATAACCGTTCTCGACTCATAAAAGTGATGCCGCTATAATGCcgcg < 6:635243/140‑1 (MQ=255)
gCGGGCCTTTTTGTTTTTGTTGTATTTTGCGCTTTTTGCCCAGCATTCCGACGAAAATCGCCGGGGAATTGTCAAAAAATACGCGACAGCGCGCAATAACCGTTCTCGACTCATAAAAGTGATGCCGCTATAATGCcgcg < 5:1024653/140‑1 (MQ=255)
gCGGGCCTTTTTGTTTTGTCTGGATTTTGCGCTTTTTGCCCAGCATTCCGACTAAAATCGCCCGGTATTTGTTAAAAAATACGCGACAGCGCGCAATAACCGTTCTCGACTCATAAAAGTGATGCCGCTATAATGCcgcg < 2:1260477/140‑1 (MQ=255)
gCGGGCCGTTTTGTTTTGTCTGGTTTTTGCGCTTTTTGCCCAGCATTCAGACGAAAATCGCCCGGGAATTGTGAAAAAATACGCGACAGCGCGCAATAACCGTTCTCGACTCATAAAAGTGATGCCGCTATAATGCcgcg < 8:509716/140‑1 (MQ=255)
cGGGCCGTTTTGTTTTGTCTGGTTTTTGCGCTTTTTGCCCCGCATTCAGACGAAAATCGCCCGGGATTTGTGAAAAAATACGCGACAGCGCGGCATAACCGTTGTCGACTCTAAAAAGTGATGCCGCGATAATgcggcgg > 2:962206/1‑139 (MQ=255)
cGTTTTGTTTTGTCTGGATTTTGCGCTTTTTTCCCAGCATTCAGACGAAAATAGCCCGGGAAATGTGAAAAAATAAGCGACAGCGCGCAATAACCGTTCTCGACTCATAAAAGTGATGCCGCTATAATGCCGCCTACTAt > 5:1054474/1‑140 (MQ=255)
ttgttttgtGGGTATTTTGCGCTTTTTGCCCAGCATTCAGACTAAAATCGCCCGGGAATTGTTAAAAAATACGCGACAGCGCGCAATAACCGTTCTCGACTCATAAAAGTGATGCCGCTATAATGCCGCGTCCTATTTGa < 5:337893/140‑1 (MQ=255)
tgttttgtCTGTATTTTGCGCTTTTTGCCCAGCATTCAGACGAAAATCGCCCGGGAATTGTGAAAAAATACGCGACAGCGCGCAATAACCGTTCTCGACTCATAAAAGTGATGCCGCTATAATGCCGCGTCCTATTTGaa < 2:58563/140‑1 (MQ=255)
tgttttgtCTGGATTTTGCGTTTTTTCACGAGGTTTCTGACGATAATCGCTCGGTATTTGTTAAAAAATACGCGACAGCGCGCAATAACCGTTCTCGACTCATAAAAGTGATGCCGCTATAATGCCGCGTCCTATTTGaa < 2:18507/140‑1 (MQ=255)
tgttttggCTGGATTTTGCGCTTTTTGCCCAGCATTCAGACGAAAATCGCCCGGGAATTGTGAAAAAATACGCGACAGCGCGCAATAACCGTTCTCGACTCATAAAAGTGATGCCGCTATAATGCCGCGTCCTATTTg < 4:97802/138‑1 (MQ=255)
ttttgtCTGGATTTTGCGCTTTTTGCCCAGCATTCAGACGAAAATCGCCCGGGAATTGTGAAAAAAAACCCTACAGCGCGCAATAAACGTTCTAGACTCATAAAAATGATGCCGCTATAATGCCTCGTCCTATTTGAAtt > 6:132661/1‑139 (MQ=255)
tgtATGGATTTTGCGATTTTTGCCCTGCATTCAGAGTAAAAGGGCCGGGTATTTGTTAAAAAATCCGCGACAGCGCGCAATAACCGTTCTCGACTCATAAAAGTGATGCCGCTATAATGCCGCGTCCTATTTGAATGCtt < 7:632130/140‑1 (MQ=255)
gtCTGTATTTTGCGCTTTTTGCCCAGATTTCACACTAAAATCGCCCGGGTATTGTGAAAAAATCCGCGACAGCGCGCAATAACCGTTCTCGACTCATAAAAGTGATGCCGCTATAATGCCGCGTCCTATTTGAATGCt < 3:960054/138‑1 (MQ=255)
gtCTGTATTTTGCGCTTTTTCCCCAGCATTAATACTAAAATCCCCCGGTAATTGTCAAAAAATACGCGACAGCGCGCAATAACCGTTCTCGACTCATAAAAGTGATGCCGCTATAATGCCGCGTCCTATTTGAATGCt < 3:155284/138‑1 (MQ=255)
taTTTTGCGCTTTTTCCCCAGCATTCAGACGAAAATCGCCCGGGAATTGTGAAAAAATACGCGACAGCGCGCAATAACCGTGCTCGACTCATAAAAGTGATGCCGCTATAATGCCGCGTCCTATTTGAATGCTTTCGGga < 6:143078/139‑1 (MQ=255)
aTTTTGCGCTTTTTGCCCAGCATTCAGACGAAAATCGCCCGGGAATTGTGAAAAAATACGCGACAGCGCGCAATAACCGTTCTCGACTCATAAAAGTGATGCCGCTATAATGCCGCGTCCTATTTGAATGCTTTCGGgat > 1:493653/1‑140 (MQ=255)
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CACCGTCTTTGCCTCTCCTCCCTGTCGTGGAGCAGGAAGCATCGCGTAAAAACGCATTTGCAACTGTCGGCGCTTTTCCAGTATGTTGCTAAAGATTTTATGAAAAACGGCCTGCGGGCCGTTTTGTTTTGTCTGGATTTTGCGCTTTTTGCCCAGCATTCAGACGAAAATCGCCCGGGAATTGTGAAAAAATACGCGACAGCGCGCAATAACCGTTCTCGACTCATAAAAGTGATGCCGCTATAATGCCGCGTCCTATTTGAATGCTTTCGGGAT > NZ_CP022686/4014106‑4014381
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| Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
N/A
