Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A10 F2 I0 R1
|
233 |
6461.8 |
9239822 |
98.3% |
9082745 |
135.7 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
freq |
annotation |
gene |
description |
| RA |
NZ_CP022686 |
4,014,242 |
A→T |
11.1% |
intergenic (+88/‑256) |
bolA → / → tig |
transcriptional regulator BolA/trigger factor |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NZ_CP022686 | 4,014,242 | 0 | A | T | 11.1%
| 278.4
/ 2.3
| 164 | intergenic (+88/‑256) | bolA/tig | transcriptional regulator BolA/trigger factor |
| Reads supporting (aligned to +/- strand): ref base A (78/60); new base T (9/11); total (93/71) |
| Fisher's exact test for biased strand distribution p-value = 3.48e-01 |
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 |
Only 100 of 168 total aligned reads displayed.
CACCGTCTTTGCCTCTCCTCCCTGTCGTGGAGCAGGAAGCATCGCGTAAAAACGCATTTGCAACTGTCGGCGCTTTTCCAGTATGTTGCTAAAGATTTTATGAAAAACGGCCTGCGGGCCGTTTTGTTTTGTCTGGATTTTGCGCTTTTTGCCCAGCATTCAGACGAAAATCGCCCGGGAATTGTGAAAAAATACGCGACAGCGCGCAATAACCGTTCTCGACTCATAAAAGTGATGCCGCTATAATGCCGCGTCCTATTTGAATGCTTTCGGGA > NZ_CP022686/4014106‑4014380
|
cacCGTCTTTGCCTCTCCTCCCTGTCGTGGAGCAGGAAGCATCTCGTAAAAACGCATTTGCAACTGTCGGCGCTTTTCCAGTATGTTGCTAAACATTTTATGAAAAACGGCCTGCGGGCCGTGTTTTTTTGTATGGAttt > 7:751494/1‑140 (MQ=255)
cacCGTCTTTGCCTCTCCTCCCTGTCGTGGAGCAGGAAGCATCGCGTAAAAACGCATTTGCAACTGTCGGCGCTTTTCCAGTATGTTGCTAAAGATTTTATGAAAAACGGCCTGCGGGCCGTTTTGTTTTGTCTGGAttt > 1:1187576/1‑140 (MQ=255)
cacCGTCTTTGCCTCTCCTCCCTGTCGTGGAGCAGGAAGCATCGCGTAAAAACGCATTTGCAACTGTCGGCGCTTTTCCAGTATGTTGCTAAAGATTTTATGAAAAACGGCCTGCGGGCCGTTTTGTTTTGTCTGGAttt > 3:137111/1‑140 (MQ=255)
cacCGTCTTTGCCTCTCCTCCCTGTCGTGGAGCAGGAAGCATCGCGTAAAAACGCATTTGCAACTGTCGGCGCTTTTCCAGTATGTTGCTAAAGATTTTATGAAAAACGGCCTGCGGGCCGTTTTGTTTTGTCTGGAttt > 2:746391/1‑140 (MQ=255)
cacCGTCTTTGCCTCTCCTCCCTGTCGTGGAGCAGGAAGCATCGCGTAAAAACGCATTTGCAACTGTCGGCGCTTTTCCAGTATGTTGCTAAAGATTTTATGAAAAACGGCCTGCGGGCCGTGTTGTTTTGTCTGGAttt > 4:813726/1‑140 (MQ=255)
acCGTCTTTGCCTCTCCTCCCTGTCGTGGAGCAGGAAGCATCGCGTAAAAACGCATTTGCAACTGTCGGCGCTGTTCCAGTATGTTGCTAAAGATTTTATGAAAAACGGCCTGCGGGCCGTTTTGTTTTGTATTGTtttt > 3:682925/1‑140 (MQ=255)
ccGTCTTTGCCTCTCCTCCATGTCGTGGAGAAGGAAGCATCGCGGAAAACCTCATTAGACAATTTCGGCGCTTTTACAGTATGTTGCTAAAGATTTAATTAAAAACGGCCAGCGGTCCGTAGTGTTTTTTCAGGAttt > 6:998832/1‑138 (MQ=255)
gTCGTTGCCTCTCCTCCCTGTCGTGGAGCAGGAAGCATCGCGTAAAAACGCAGTTGCAACTGTCGGAGCGTTTCCAGTATGATGCTAAAGATTTTATGAAAAACGGCCTGCGGGCCGTGTTGTTTTGTCTGGATTTTg > 6:548131/1‑138 (MQ=255)
tCTTTGCCTCTCCTCCCTGTCGTGGAGCAGGAAGCATCGCGTAAAAACGCATTTGCAACTGTCGGCGCTTTTCCAGTATGTTGCTAAAGATTTTATGAAAAACGGCCTGCGGGCCGTGTTTTTTTGTGGTGTTTTTgcgg > 1:1012048/1‑139 (MQ=255)
tCTTTGCCTCTCCTCCCTGTCGTGGAGCAGGAAGCATCGCCTAAAAACGCCATTGCTACGGTCGGCGCTTTTCCAGTATGTTGCAAAAGATTATATGAAAAACGGCCTGCGGGCCGGGTTGTTTTGTATTGAtttttt > 5:50827/1‑136 (MQ=255)
tCTTTGCCTCTCCTCCCTGTAGTTGAGCAGGAAGCATCGCGTAAAAAATCATTAGCCACTGTCGGCGCTTTTCCAGTATGTTGCTTAAGATATTATGAAAAACGGAGTGCGTGCCGTTTTGGTTTGTGTGGATTTTgatg > 8:530913/1‑137 (MQ=255)
tctcCTCCCTGTCGTGGAGCAGGAAGCATCGCGTAAAAACGCATTTGCAACTGTCGGCGCTTTTCCAGTATGTTGCTAAAGATTTTATGAAAAACGGCCTGCGGGCCGTTTTGTTTTGTCTGGATTTTGCGCTTTTTGcc < 2:42602/140‑1 (MQ=255)
tcctccCTGTCGTGGAGCAGGAAGCATCGCGTAAAAACGCATTTGCAACTGTCGGCGCTTTTCCAGTATGTTGCTAAAGATTTTATGAAAAACGGCCTGCGGGGCGTTTTGTTTTTTATGGATTTTGCGGGTTTTGGCCa > 4:575856/1‑140 (MQ=255)
tcctccCTGTCGTGGAGCAGGAAGCATCGCGTAAAAACGCATTTGCAACTGTCGGCGCTTTTCCAGTATGTTGCTAAAGATTTTATGAAAAACGGCCTGCGGGCCGTTTTGTTTTGTCTGGTTTTTGCGCTTTTTGcccc > 8:62438/1‑139 (MQ=255)
tcctccCTGTCGTGGAGCAGGAAGCATCGCGTAAAAACGCATTTGCAACTGTCGGCGCTTTTCCAGTATGTTGCTAAAGATTTTATGAAAAACGGCCTGCGGGCCGTTTTGTTTTGTCTGGATTTTGCGCTTTTTGCCCa < 3:212598/140‑1 (MQ=255)
tcctccCTGTCGTGGAGCAGGAAGCATCGCGTAAAAACGCATTTGCAACTGTCGGCGCTTTTCCAGTATGTTGCTAAAGATTTTATGAAAAACGGCCTGCGGGCCGTTTTGTTTTGTCTGGAGTTTGCGCTTTTTGCCCa > 8:400078/1‑140 (MQ=255)
ctccCTGTCGTGGAGCAGGAAGCATCGCGTAAAAACGCATTTGCAACTGTCGGCGCTTTTCCAGTATGTTGCTAAAGATTTTATGAAAAACGGCCTGCGGGCCGTTTTTTTTTGTCTGGATTTTGCGCTTTTTGcc > 6:271038/1‑136 (MQ=255)
ctccCTGTCGTGGAGCAGGAAGCATCGCGTAAAAACGCATTTGCAACTGTCGGCGCGTTTCCAGTATGTTGCTAAAGATTTTATGAAAAACGGCCTGCGGGCCGTGTTGTTTTGTGTGGCTTTTTGGGttttttaccc > 5:52625/1‑133 (MQ=255)
tCGTGGAGCTGGAAGCTACGCGTAAAAACGCATTTGCAACTGTCGGCGCTTTTCCAGTATGTTGCTAAAGATTTTATTAAAAACGGCCTGCGGGCCGTTTTGTTTTGTCTGGATTTTGCTCTTTTTGCCCAGCATTCAGa < 7:474616/140‑1 (MQ=255)
cGTGGAGCAGGAAGCATCGCGTAAAAACGCATTTGCAACTGTCGGCGCTTTTCCAGTATGTTGCTAAAGATTTTATGAAAAACGGCCTGCGGGCCGTTTTGTTTTGTCGGGTTTTTTGGCTTTTTTGCCCGGAATCAGAc > 7:838063/1‑140 (MQ=255)
gTGGAGCAGGAAGCATCGCGTAAAAACGCATTTGCAACTGTCGGCGCTTTTCCAGTATGTTGCTAAAGATTTTATGAAAAACGGCCTGCGGGCCGTTTTGTTTTTTCTGGATTTTTCGGGTTTTGGCCAGCAATCAgc > 5:1113206/1‑137 (MQ=255)
ttgAGCAGGAAGCATCGCGTAAAAACGCATTTGCAACTGTCGGCGCTTTTCCAGTATGTTGCTAAAGATTTTATGAAAAACGGCCTGCGGGCCGTTTTGATTTGTCTTGATTATTCGCGTTTTGGCCACCATTAAGACGa > 1:980728/3‑140 (MQ=255)
tGGAGCAGGAAGCATCGCGTAAAAACGCATTTGCAACTGTCGGCGCTTTTCCAGTATGTTGCTAAAGATTTTATGAAAAACGGCCTGCGGGCCGTTTTGTTTTGTCTGGATTTTTCGCTTTTTGCCCAGCATTAAGACGa > 2:267629/1‑140 (MQ=255)
gAGCAGGAAGCATCGCGTAAAAACGCATTTGCAACTGTCGGCGCTTTTCCAGTATGTTGCTAAAGATTTTATGAAAAACGGCCTGCGGGCCGTTTTGTTTTTTGTGGATTTTGCGCTTTTTGCCCAGCATTCAGACGaaa > 1:624502/1‑140 (MQ=255)
aGCAGGAAGCATCGCGTAAAAACGCATTTGCAACTGTCGGCGCTTTTCCAGTATGTTGCTAAAGATTTTATGAAAAACGGCCTGCGGGCCGTTTTTTTTTTTCTGGATTTTGGGCTTTTTGCCCAGCATTCAGACGaaaa > 2:999478/1‑140 (MQ=255)
ccatgAAGCATCGCGTAAAAACGCAGTTGCAACTGTCGGCGCTTTTCCAGTTTGTTGCTAAAGATTTTATGAATAACGGCCTGCGGGCCGTTTTGTTTTGTCTGGATTTTGCGCTTTTTGCCCAGCATTCAGACGAAAAt < 2:78292/136‑1 (MQ=255)
cAGGAAGCATCGCGTAAAAACGCATTTGCAACTGTCGGCGCTTTTCCAGTATGTTGCTAAAGATTTTATGAAAAACGGCCTGCGGGCCGTGTTGGTTTTTGTGGATTTTTCGCTTTTTTCCCAGCATTCAGACGAAAATc > 1:253004/1‑140 (MQ=255)
ggAAGCATCGCGTAAAAACGCATTTGCAACTGTCGGCGCTTTTCCAGTATGTTGCTAAAGATTTTATGAAAAACGGCCTGCGGGCCGTTTTGTTTTGTCTGGATTTTGCGCTTTTTGCCCAGCATTCAGACGAAAATCGc > 3:836864/1‑140 (MQ=255)
aTCGCGTAAAAACGCATTTGCAACTGTCGGCGCTTTTCCAGTATGTTGCTAAAGATTTTATGAAAAACGGCCTGCGGGCCGTTTTGTTTTGTCTGGATTTTGCGCTTTTTGCCCAGCATTCAGACGAAAATCGCCCGGGa > 4:645291/1‑140 (MQ=255)
aTCGCGTAAAAACGCATTTGCAACTGTCGGCGCTTTTCCAGTATGTTGCTAAAGATTTTATGAAAAACGGCCTGCGGGCCGTTTTGTTTTGTCTGGATTTTGCGCTTTTTGCCCAGCATTCAGACGAAAATCGCCCGGGa > 4:1134910/1‑140 (MQ=255)
aTCGCGTAAAAACGCATTTGCAACTGTCGGCGCTTTTCCAGTATGTTGCTAAAGATTTTATGAAAAACGGCCTGCGGGCCGTTTTGTTTTGCCTGGATTTTGCGCTTTTTGCCCAGCATTCAGACGAAAATCGCCCGGGa > 4:874426/1‑140 (MQ=255)
aTCGCGTAAAAACGCATTTGCAACTGTCGGCGCTTTTCCAGTATGTTGCTAAAGATTTTATGAAAAACGGCCTGCGGGCCGTTTTGTGTTGGCTGGATTTTGGGCTTTTTGCCCAGCCTTCAGACGAAAATCGCCCGGGa > 2:797872/1‑140 (MQ=255)
aTCGCGTAAAAACGCATTTGCAACTGTCGGCGCTTTTCCAGTATGTTGATAAAGATTTTATGAAAAACGGCCTGCGGGCCGTGTTGTTTTGTCTGGAGTTTGCGAGTTTTGCCCAGCATTCAGACGATAATAGCCCcggt > 8:377205/1‑139 (MQ=255)
aTCGCGTAAAAACGCATGTGCAACTGTCGGCGCTGTTCCAGTATGTTGCTAAAGATTTTATGAAAAACGGCCTGCGGGCCGTGTTGGTTTGTCTGGCTTTTGCGGTTTTTGCCCAGCATTCAGCCGCAACTCGCACgggg > 8:372519/1‑139 (MQ=255)
cgcgTAAAAACGCATTTGCAACTGTCGGCGCTTTTCCAGTATGTTGCTAAAGATTTTATGAAAAACGGCCTGCGGGCCGTTTTGTTTTGTCTGGATTTTTCGCTTTTTGCCCAGCATTCAGACGAAAATCGCCCGGGAAt > 8:486561/1‑140 (MQ=255)
cgcgTAAAAACGCATTTGCAACTGTCGGCGCTTTTCCAGTATGTTGCTAAAGATTTTATGAAAAACGGCCTGCGGGCCGTTTTGTTTTGTCTGGATTTTGCGCTTTTTTGCCAGCATTCAGACGAAAATCGCCCGGGAAt > 3:375572/1‑140 (MQ=255)
cgcgTAAAAACGCATTTGCAACTGTCGGCGCTTTTCCAGTATGTTGCTAAAGATTTTATGAAAAACGGCCTGCGGGCCGTTTTGTTTTGGGTGGATTTTGAGATGTTTGCCCAGCATTAATCCGAAAATCGCCCGGGatt > 1:820786/1‑138 (MQ=255)
cgcgTAAAAACGCATTTGCAACTGTCGGCGCTTTTCCAGTATGTTGCTAAAGATTTTATGAAAAACGGCCTGCGGGCCGTGTTGTTTTGTCTGGATTTTTCGCTTTTTTGCCAGCATTCAGAAGAAAATCGCCCGGGaaa > 1:537888/1‑139 (MQ=255)
cgcgTAAAAACGCATTTGCAACTGTCGGCGCTTTTCCAGTATGTTGCTAAAGATTTTATGAAAAACGGCCTGCGGGCCGTGTTGTTTTGTCTGGATTTTTCGCTTTTTGCCCAGCATTCAGACGAAAATCGCCCGGGAAt > 4:385749/1‑140 (MQ=255)
cgTAAAAACGCATTTGCAACTGTCGGCGCTTTTCCAGTATGTTGCTAAAGATTTTATGAAAAACGGCCTGCGGGCCGTGTTGTTTTGTCTGGATTTTGCGCTTTTTGCCCAGCATTCAGACGAAAATCGCCCGGGAAt > 5:452372/1‑138 (MQ=255)
cgTAAAAACGCATTTGCAACTGTCGGCGCTTTTACAGTATGTTGCTAAAGAGTTTATGAAAAACGGCCTGCGGGCCGTGTTGGTGTGTCTGTGTTTTGGGCTGTTTGCGCCGCATTAAGCCCATAAGCGACCGGGAATtg > 8:659356/1‑140 (MQ=255)
tAAAAACGCATTTGCAACTGTCGGCGCTTTTCCAGTATGTTGCTAAAGATTTTATGAAAAACGGCCTGCGGGCCGTTTTGTTTTGTGTGGATTTTGCGGTTTTTTGCCAGCATTGAGACGAAAAGCGACCCGGTATtg > 5:959801/1‑138 (MQ=255)
aaaCGCATTTGCAACTGTCGGCGCTTTTCCAGTATGTTGCTAAAGATTTTATGAAAAACGGCCTGCGGGCCGTTTTGTTTTGTCTGGAGTTTGCGGTTTTTGCCCAGCATTCAGACGAAAATCGCCCGGGTATTGTGaaa > 2:1080337/1‑140 (MQ=255)
cATTTGCAACTGTCGGCGCTTTTCCAGTATGTTGCTAAAGATTTTATGAAAAACGGCCTGCGGGCCGTTTTGTTTTGTCTGGATTTTGCGCTTTTTGCCCAGCATTCAGACGAAAATCGCCCGGGAATTGTGAAAAAATa > 3:279674/1‑140 (MQ=255)
aCTGGCGGCGCTTTTCCATTATGTTGCAAAATATTTTATTAAACACGGCCTGCGGGCCGTTTTTTTTTGTCTGGATTTTGCGCTTTTTGCCCAGCATTCAGACGAAAATCGCCCGGGAATTGTGAAAAAATACGCGACAg < 2:826731/140‑1 (MQ=255)
cTGTCGGCGCTTTTCCAGTATGTTGCTAAAGATTTTATGAAAAACGGCCTGCGGGCCGTTTTGTTTTGTCTGGATTTTGCGCTTTTTGCCCAGCATTCAGACGAAAATCGCCCGGGTATTGTGAAAAAATACGCGACAgc > 1:410674/1‑140 (MQ=255)
tggcGGCGCTTTTCCCGTATGTGGCTAAAGATTTTATGAAAACCGGCCTGCGGGCCGTTTTGTTTTGTCTGGATTTTGCGCTTTTTGCCCACCATTAAGACGAAAATCGCCCGGGAATTGTGAAAAAATACGCGACAgcg < 1:963540/137‑1 (MQ=255)
tGTCGGGGCTTTTCCAGTATGTTGCTAAAGATTTTATGAAAAACGGCCTGCGGGCCGTTTTGTTTTGTCTGTATTTTGCGCTTTTTGCCCAGCATTCAGACCAAAATCGCCCGGTAATTGTGAAAAAATACGCGACAgcg < 3:135412/140‑1 (MQ=255)
gggcGGCGCTTGTCCAGAATGTTGCTAAAGAGATTATGAAACCCGGCCTGCGGGCCGTTTTGTTTGGTCTGGATTTTGCGCTTTTTGCCCCGCATTCAGACGAAAATCGCCGGGGAATTGTGAAAAAATACGCGACAg < 6:857965/135‑1 (MQ=255)
gTCGGCGCTTTTCCAGTATGTTGCTAAAGATTTTATGAAAAACGGCCTGCGGGCCGTTTTGTTTTGTCTGGATTTTGCGCGTTTTGCCCAGCATTCAGACGAAAAAAGCCCGGGAATTGTTAAAAAAAAcgcgcacgcgc > 2:1090904/1‑133 (MQ=255)
gTCGGCGCTTTTCCAGTATGTTGCGAAAGATTTTATGAAAAACGGCCTGCGGGCCGTGTTGGTTTGTCTGGATTTTTGGCGTTTTGCCCCGCATTAAGACGAAAAGCGCCCCGGAATTGTGAAAAAATAAGGGTCAgcgc > 7:994987/1‑140 (MQ=255)
gcGGCTCTTTTCCAGTATGTTGCTAAAGATTTTATGAAAAACGGCCGGCGGGCCGTTTTGTTTTGTCTGGATTTTGCGCTTTTTGCCCAGCATTCAGACGAAAATCGCCCGGGAATTGTGAAAAAATACGCGACAgcg < 6:522091/137‑1 (MQ=255)
ggCGCTTTTCCAGTATGTTGCTAAAGATTTTATGAAAAACGGCCTGCGGGCCGTGTTGTTTTTTCTGGTTTTTTCGCTTTTTGCCCAGCATTCAGACCAAAATCGCCCGGGAATTGGGAAAAAATACGCGCCAGCGCGCa > 4:1146777/1‑140 (MQ=255)
gtttgCCAGTCTGTTGAAAAAGATTTTATGAAACACGGCCGGCGGGCCGTTTTGTTTTGGCTGGATTTTGCGCATTTTCCCCAGCATTCAGACGAAAATCCCCCGGTAATTGTGAAAAAATACGCGACAGCGCGCAATaa < 8:122526/139‑1 (MQ=255)
cTTTTCCAGTATGTTGCTAAAGATTTTATGAAAAACGGCCTGCGGGCCGTTTTGTTTTGTCTGGATTTTGCGCTTTTTGCCCAGCATTCAGACGAAAATCGCCCGGGAATTGTGAAAAAATACGCGACAGCGCGCAATaa < 2:611779/140‑1 (MQ=255)
ttGTTGCTAATGTTTTTATGAAAAACGGCCTGCGGGCCGTTTTGTTTGGTCTGGATTTTGCGCTTTTTGCCCAGCATTCAGACGAAAATCGCCCGGGAATTGTGAAAAAATACGCGACAGCGCGCAATAACCGTtctc < 6:1125430/137‑1 (MQ=255)
aTGTTGCTAACTATTTTATGAAAAACGGACTGCGGGCGGTTTTGTTTTGTATGGATTTTGCGATTTTTGCCCAGAATTCAGACTAAAATCGCCCGGTAATTGTGAAAAAATCCGCGACAGCGCGCAATAACCGTTCTCGa < 3:82945/140‑1 (MQ=255)
tGTTGCTAAAGATTTTATGAAAAACGGCGTGCGGGGGGTTTTGTTTTGGCTGTATTTTGCGCTTTTTGCCCAGCATTCAGACGAAATTCGCCCGGTAATTGTGAAAAAATACGCGACAGCGCGCAATAACCGTTCTCg < 5:1032722/138‑1 (MQ=255)
tttGCTAAAGATTTAATTAAAAACGGCCTGCGGGCCGTTTTGTTTTTTCTGGATTTTGCGCTTTTTGCCCAGCATTCAGACGAAAATCGCCCGGGAATTGTGAAAAAATACGCGACAGCGCGCAATAACCGTTCTCGACt < 4:856475/139‑1 (MQ=255)
ttGCTAAAGATTTTATGAAAAACGGCCTGCGGGCCGTTTTTTTTTGTCTGGATTTTGCGCGTTTTGGCCAGCATTCCGAAGAAAATCGCCCGGGAATTGTGAAAAAATAAGCGCCAGCGCGCAATAACCGTTCTCGACTc > 7:870192/1‑140 (MQ=255)
ttGCTAAAGATTTTATGAAAAACGGCCTGCGGGCCGTTATGTTTTGTCTGGATTTTGCGAGTTTTGCCCATCAATGAGACGAAAATCGCGCCGGAATTGTGAAAAAATACCCGACAGCGCGCCATAAACGTtctagccta > 8:468119/1‑134 (MQ=255)
ttGCTAAAGATTTTATGAAAAACGGCCTGCGGGCCGTGTTGTTTTGTCTGGATTTTGCGCTTTTTGCCCAGCATTCAGACGAAAATAGCCCGGGAATTGTGAAAAAATACGCGCCAGCCCGCAATAACCGGtctacacga > 8:627514/1‑134 (MQ=255)
ttGCTAAAGATTTTATGAAAAACGGCCTGCGGGCCGTGTTGTTTTGTCTGGATTTTGCGCGTTTTTGCCAGCATTCAGACGAAAATAGCCCGGGAATTGTGAAAAAATACGCGACAGCGCGCAATAACCGGTCTCGACta > 2:1053210/1‑139 (MQ=255)
gCTAAAGATTTTATGAAAAACGGCCTGCGGGCCGTTTTGTTTTGTCTGGATTTTGCGCTTTTTGCCCAGCATTCAGACGAAAATCGCCCGGGAATTGTGAAAAAATACGCGACAGCGCGCAATAACCGTTCTCGACTc > 5:338959/1‑138 (MQ=255)
gCTAAAGATTTTATGAAAAACGGCCTGCGGGCCGTGTTGTTTTGTCTGGATTTTTCGCTTTTTGCCCAGCATTAAGACGAAAATCGCCCGGGAATTGTGAAAAAATACGCGACAGCGCGCAATAACCGTTCTCGACTc > 6:40861/1‑138 (MQ=255)
tAAAGATTTTATGAAAACCGGCCTGCGGGCCGTTTTGTTTTGTCTGGATTTTGCGCTTTTTGCCCAGCATTCAGACTAAAATCGCCCGGTAATTGTGAAAAAATCCGCGACAGCGCGCAATAACCGTTCTCGACTCATaa < 3:811490/140‑1 (MQ=255)
aaGATTTTATGAAAAACGGCCTGCGGGCCGTTTTGTTTTGTCTGGATTTTGCGCTTTTTGCCCAGCATTCAGACGAAAATCGCCCGGGAATTGTGAAAAAATACGCGACAGCGCGCAATAACCGTTCTCGACTCATaaaa > 4:473918/1‑140 (MQ=255)
aaGATTTTATGAAAAACGGCCTGCGGGCCGTTTTGGTTTGTCTGGATTTTGCGCTTTTTGCCCAGCATTCAGCCGAAAATCGCCCGGGAATTGTGAAAAAATACGCGACAGCGCGCAATAACCGTTCTCGACTCATaaaa > 4:413974/1‑140 (MQ=255)
tcttaaaaaCGGCCTGCGGGCTGTTTTGTTTTGTCTGTATTTTGCGCTTTTTGCCCAGCATTCAGACGAAAAGCGCCCGGTTATTTTGAAAAAATACGCGACATCGCGCAATAACCGTTCTCGACTCATAAAAGTGATGc < 3:696242/136‑1 (MQ=255)
tctGAAAAACGGCCGGTGGGCGTTTTTGTTTTGTCTGGATTTTGCGCTTTTTGCCCAGCATTCAGCCTAAAATCGCCCGGGAATTGTGAAAAAATACGCGACAGCGCGCAATAACCGTTCTCGACTCATAAAAGTGATGc < 3:646274/138‑1 (MQ=255)
tATTAAAACCGGCCTGCGGGCGTTTTTGTTTTGTCTGGATTTTGCGATTTTTGCCCAGCATTCATAGTAAATTCGCCCGGTAATTGTTAAAAAATACGCGACAGCGCGCAATAACCGTTCTCGACTCATAAAAGTGAt < 5:685322/138‑1 (MQ=255)
tATTAAAACCGGCCTGCGGGCCGTTTTGTTTTGTCTGGATTTTGCGCTTTTTCCCCAGCATTCAGACGAAAATCGCCCGCGAATTGTTAAAAAATACTCGACAGCGCGCAATAACCGTTCTCGACTCATAAAAGTGATGc < 1:721220/140‑1 (MQ=255)
tATTAAAAACGGCCTGGGGGCGGTTTTTTTTTGTATGGATTTTGCGATTTTGGCCCAGAATTAAGACTAAAAGCGCCCGGGAATTGTCAAAAAATCCGCGACAGCGCGCAATAACCGTTCTCGACTCATAAAAGTGATGc < 7:500190/140‑1 (MQ=255)
tATTAAAAACGGCCTGCGGTGTTTTTTTTTTTGTCTGGATTTTGCGCTTTTTGCCCATAATTCAGCTTAATATCGCCCGGTATTTGTTAAAAAATACGCGACAGCGCGCAATAACCGTTCTCGACTCATAAAAGTGATGc < 3:301192/140‑1 (MQ=255)
tATTAAAAACGGCCTGCGGGCCGTTTTGTTTTGTCTGTATTTTGCGCTTTTTGCCAAGAATTCAGACGAAAATCGCCCGGGAATTGTGAAAAAATACGCGACAGCGCGCAATAACCGTTCTCGACTCATAAAAGTGATGc < 1:490471/140‑1 (MQ=255)
tATTAAAAACGGCCTGCGGGCCGTTTTGTTTTGTCTGGATTTTGCGCTTTTTGCCCCGCATTCAGCCTAAAATCGCCCGGTAATTTTGAAAAAATCCGCGACAGCGCGCAATAACCGTTCTCGACTCATAAAAGTGATGc < 7:292286/140‑1 (MQ=255)
tATGAAACACGGCCTGCGGTCCGTTTTGTTTTGGCTGGTTTTTGCGCTTTTGGCCCAGCATCCATACTAAAATCGCCCGGTAATTGTGAAAAATTACGCGACAGCGCGCAATAACCGTTCTCGACTCATAAAAGTGATGc < 2:577873/140‑1 (MQ=255)
tATGAAAAACGGCCTGCGGGCCGTTTTGTTTTGTCTGGATTTTGCGCTTTTTGCACAGCATTCAGACGAAAATCGCCCGGTAATTGTTAAAAAATACGCGACAGCGCGCAATAACCGTTCTCGACTCATAAAAGTGATGc < 4:918600/140‑1 (MQ=255)
ttaataaCGGCCTGGGGTCCGTTTTTTTTTTTCTGTATTTTGCGTTTTTTCCCCTGATTTCTGACTAAAATCGCCGGGTATTTGGCAAAAAATACGCGACAGCGCGCAATAACCGTTCTCGACTCATAAACGTGATGc < 5:881662/133‑1 (MQ=255)
ttaaaacCGGCCTGGGGGCCGTTTTTTTTTGTGTGTATTTTGCGCTTTTCGCCCAGCATTCAGACTAAAATCGCCCGGGAATTGTTAAAAAATCCGCGACAGCGCGCAATAACCGTTCTCGACTCATAAAAGTGATGc < 5:205097/136‑1 (MQ=255)
ttaaaacCGGCCTGCGGGCCGTTTTGTTTTGTTTGGATTTTGCGCTTTTTGCCCAGCATTCAGACGAAAATCGCCCGGTAATTGTTAAAAAATACGCGACAGCGCGCAATAACCGTTCTCGACTCATAAAAGTGATGCCg < 8:20261/138‑1 (MQ=255)
tGAAAACCGGCCTGCGGTCAGTTTTGTTTTGTCTGGATTTTGCGCTTTTTGCCCAGCATTCTGACGAAACTCGCCCGGGAATTGTGCAAAAATCCGCGACAGCGCGCAATAACCGTTCTCGACTCATAAAAGTGATGCCg < 8:925391/140‑1 (MQ=255)
aactcGGCCTGCGGGCGGTTTTGTTTTGTCTGGTTTTTGCGTGTTTTGCCCAGCATTAAGCCGAAAATCGCCCGGTAATTGTCAAAAAAAACGCGACAGCGCGCAATAACCGTTCTCGACTCATAAAAGTGATGCCGc < 5:973722/134‑1 (MQ=255)
aCGGCCTGCGGGCCGTTTTGTTTTGTCTGGGTTTTGCGCTTTTTGCCCAGCATTCAGACGAAAATCGCCCGGGAATTGTGAAAAAATACGCGACAGCGCGCAATAACCGTTCTCGACTCATAAAAGTGATGCCGCtat > 6:903757/1‑138 (MQ=255)
cccggCGGGCCGTTTTTTTTTGTCGGGATTTTGCTCTTTTTGCCCTGCATTCAGACGAAAATCGCCCGGGATTTGTTAAAAAATACGCGACAGCGCGCAATAACCGTTCTCGACTCATAAAAGTGATGCCGCTATAAt < 5:613692/134‑1 (MQ=255)
cTGCGGGCCGTTTTGTTTTGGCTGGATTTTGCGCTTTTTGCCCAGCATTCAGACGAAAATCGCCCGGGAATTGTTAAAAAATACGCGACAGCGCGCAATAACCGTTCTCGACTCATAAAAGTGATGCCGCTATAATGc < 6:744609/138‑1 (MQ=255)
gggCCGTTTTGTTTTGTCTGGATTTTGCGCTTTTTGCCCAGCATTCAGACGAAAATCGCCCGGGAATTGTGAAAAAATACGCGACAGCGCGCAATAACCGTTCTCGACTCATAAAAGTGATGCCGCTATAATGCCGCGTc < 2:456586/140‑1 (MQ=255)
gggCCGTTTTGTTTTGTCTGGATTTTGCGATTTTTGCCCAGAATTCATACGAAAATCGCCCGGGAATTGTGAAAAAATACGCGACAGCGCGCAATAACCGTTCTCGACTCATAAAAGTGATGCCGCTATAATGCcgcg < 6:14907/138‑1 (MQ=255)
ggcgtttttgttttgTCGGGTTTTTGGGCTTTTTGCCCAGCTTTCAGAAGAAAATCGCCCGGGAATTGAGAAAAAATACGCTACAGCGCGCAATAACCGTTCTCGACTCATAAAAGTGATGCCGCTATAATGCCGCGTcc < 3:542640/135‑1 (MQ=255)
tttgttttgtATTGATTTTTGGCTTTTTGCCCAGCATTCAGACGAAAATAGCCCGGGAATTGTGAAAAAATAAGCGCCAGCGCGCAATAACCGGTCTCGCCTCAGAAAAGTGATGCCGCTATAATGCCCCGGCCTAtt > 6:18382/1‑138 (MQ=255)
ttgttttgtCTGGATTTTGCGCTTTTTGCCCACCATGCAGACGAAAATCGCCCGGGAATTGTGAAAAAATACGCGACAGCGCGCAATAACCGTTCTCGACTCATAAAAGTGATGCCGCTATAATGCCGCGTCCTATTTGa < 4:44202/140‑1 (MQ=255)
ttttttgtGTGGTTTTTGCGGTTTTTGACCAGAATTCTGCCTAAAATCGCCCGGTAATTGTTAAAAAATACGCGACAGCGCGCAATAACCGTTCTCGACTCATAAAAGTGATGCCGCTATAATGCCGCGTCCTATTTGaa < 3:753505/138‑1 (MQ=255)
tgttttttGTGGATTTTGCTATTTTTGCACGTCATTCTTACGAATATCGCCCTGTTTTTGTTAAAAAATCCGGGACAGCGCGCAATACCCGTTCGCTCCTCATAATAGTGATGCCGCTACAATGCCGCGTCCTATTTg < 6:193597/138‑1 (MQ=255)
tgttttgtCTGTTTTTTGCTCTTTTTGCCCAGCATTCACACTAAAATCGCCGGGTATTTGTTAAAAATTACGCGACAGCGCGCAATAACCGTTCTCGACTCATAAAAGTGATGCCGCTATAATGCCGCGTCCTATTTGaa < 1:911008/140‑1 (MQ=255)
tgttttgtCTGGATTTTTCGATTTTTTCCCTTAATTCAGACGAAAATCGCCCGGGAATTTTGAAAAAATACGCGACAGCGCGCAATAACCGTGCTCGACTCATAAATGTGATTCCGCTATAATGCCGCGTCCTATTTGaa < 4:172114/140‑1 (MQ=255)
tCTGGATTTTGCGCTTTTTGCCCAGCATTCAGACGAAAATCGCCCGGGAATTGTGAAAAAATACGCGACAGCGCGCAATAACCGTTCTCGACTCATAAAAGTGATGACGCTATAATGCCGCGTCCTATTTGAATGCTTTc > 1:327743/1‑140 (MQ=255)
taTTTTGCGCTTTTTGCCCAGCATTCAGACTAAAATCGCCCGGGAATTGTGAAAAAATACGCGACAGCGCGCAATAACCGTTCTCGACTCATAAAAGTGATGCCGCTATAATGCCGCGTCCTATTTGAATGCTTTCGGga < 4:279674/139‑1 (MQ=255)
taTTTTGCGCTTTTTGCCCAGCATTCAGACGAAAATCGCCCGGGAATTGTGAAAAAATACGCGACAGCGCGCAATAACCGTTCTCGACTCATAAAAGTGATGCCGCTATAATGCCGCGTCCTATTTGAATGCTTTCGGga < 8:289231/139‑1 (MQ=255)
taTTTGGCGCTTTTTGCCAAGCATTCAGACTAAAATCGCCCGGTAATTGTTAAAAAATACGCGACAGCGCGCAATAACCGTTCTCGACTCATAAAAGTGATGCCGCTATAATTCCGCGTCCTATTTGAATGCTTTCAGga < 2:315760/139‑1 (MQ=255)
taTTTGGCGATTTTTGCCCATCATTCAGAGTAAAATCGCCCGGTAATTGTTAAAAAATACGCGACAGCGCGCAATAACCGTTCTCGACTCATAAAAGTGATGCCGCTATAATGCCGCGTCCTATTTGAATGCTTTCGGga < 1:169193/139‑1 (MQ=255)
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CACCGTCTTTGCCTCTCCTCCCTGTCGTGGAGCAGGAAGCATCGCGTAAAAACGCATTTGCAACTGTCGGCGCTTTTCCAGTATGTTGCTAAAGATTTTATGAAAAACGGCCTGCGGGCCGTTTTGTTTTGTCTGGATTTTGCGCTTTTTGCCCAGCATTCAGACGAAAATCGCCCGGGAATTGTGAAAAAATACGCGACAGCGCGCAATAACCGTTCTCGACTCATAAAAGTGATGCCGCTATAATGCCGCGTCCTATTTGAATGCTTTCGGGA > NZ_CP022686/4014106‑4014380
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| Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
N/A
