Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A26 F12 I0 R1
|
131 |
9881.0 |
7547414 |
98.3% |
7419107 |
134.8 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
freq |
annotation |
gene |
description |
| RA |
NZ_CP022686 |
1,674,244 |
T→G |
12.1% |
T182P (ACC→CCC) |
ygfB ← |
UPF0149 family protein YgfB |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NZ_CP022686 | 1,674,244 | 0 | T | G | 12.1%
| 257.0
/ 8.2
| 157 | T182P (ACC→CCC) | ygfB | UPF0149 family protein YgfB |
| Reads supporting (aligned to +/- strand): ref base T (34/100); new base G (13/10); total (47/110) |
| Fisher's exact test for biased strand distribution p-value = 5.45e-03 |
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 |
Only 100 of 162 total aligned reads displayed.
GCGCGGCGCTGCCGGGTTGCATTTGCTCTACCAGGGCCTGACGGCGACGCTGAAACTCTTGCCGGGATATATCACTCATAACACTCTCCTTACATTTTTTGTTTTTAGTGTAGAGTCGGTTTTTGTACTTCTGGCGCGGTCGGTTGCGGATGAGTAAAGGTGTCGTGGCATAACAGCGCGGCAACACGGACGTACTCGATGATCTCTTCAAGCGACATTTCAAGCTCTTCCTGATCTTCGTCTTCGTCGTAACCCAACTGCGCGATGTTACGCAGATC > NZ_CP022686/1674105‑1674382
|
gcgcGGCGCTGCCGGGTTGCATTTGCTCTACCAGGGCCTGACGGCGACGCTGAAACTCTTGCCGGGATATATCACTCATAACACTCTCCTTACATTTTTTGTTTTTAGTGTAGAGTCGGTTTTTGTACTTCTGGCGcggt < 3:163731/140‑1 (MQ=255)
tGCCTGGTTGCATTTGCTCTACCAGGGCCTGACGTCGACGCTGAAACTCTTGCCGGGATATATCAATCATAACACTCTCCTTACATTTTTTGTTTTTTGTGTTGAGTCGGTTTTTGTACTTCTGGCGCGGTCGGTTGc < 7:163792/138‑1 (MQ=255)
tGCCGGGTTGCATTTGCTCTACCAGTGCCTGACGGCGACGCTGAAACTCTTGCCGGGATATATCACTCATAACACTCTCCTTACATTTTTTGTTTTTAGTGTAGAGTCGGTTTTTGTACTTCTGGCGCTGTCGGTTGc < 1:843494/138‑1 (MQ=255)
tGCCGGGTTGCATTTGCTCTACCAGGGCCTGACGGCGACGCTGAAACTCTTGCCGGGATATATCACTCATAACACTCTCCTTACATTTTTTGTTTTTAGTGTAGAGTCGGTTTTTGTACTTCTGGCGCGGTCGGTTGc < 7:667781/138‑1 (MQ=255)
tGCCGGGTTGCATTTGCTCTACCAGGGCCTGACGGCGACGCTGAAACTCTTGCCGGGATATATCACTCATAACACTCTCCTTACATTTTTTGTTTTTAGTGTAGAGTCGGTTTTTGTACTTCTGGCGCGGTCGGTTGc < 6:705714/138‑1 (MQ=255)
tGCCGGGTTGCATTTGCTCTACCAGGGCCTGACGGCGACGCTGAAACTCTTGCCGGGATATATCACTCATAACACTCTCCTTACATTTTTTGTTTTTAGTGTAGAGTCGGTTTTTGTACTTCTGGCGCGGTCGGTTGc < 2:685865/138‑1 (MQ=255)
tGCCGGGTTGCATTTGCTCTACCAGGGCCTGACGGCGACGCTGAAACTCTTGCCGGGATATATCACTCATAACACTCTCCATACATTTTTTGTTTTTAGTGTAGAGTCGGTTTTTGTACTTCTGGCGCGGGCGGTTGc < 2:42449/138‑1 (MQ=255)
tGCCGGGTTGCATTTGATCTACGAGGGCCTGCCGGGGAAGCTGAAACTGTTGCCGGTATATATCTCTCATAACACTCTCCTTAAATTTTTTGTTTTTATTGTAGAGTCGGTTTTTGTACTTCTGGCGCGGTCGGTTGc < 7:712450/138‑1 (MQ=255)
ggCCGGGTTGCATTTGCTCTACCAGGGCCTGACGGCGACGCTGAAACTCTTGCCGGGATATATCACTCATAACACTCTCCTTACATTTTTTGTTTTTAGTGTAGAGTCGGTTTTTGTACTTCTGGCGCGGTCGGTTGc < 5:214225/137‑1 (MQ=255)
ggCCGGGTTGCATTTGCTCTACCAGGGCCTGACGGCGACGCTGAAACTCTTGCCGGGATATATCACTCATAACACTCTCCTTACATTTTTTGTTTTTAGTGTAGAGTCGGTTTTTGTACTTCTGGCGCGGTCGGTTGc < 2:482711/137‑1 (MQ=255)
ccGGGTTGCATTTGCTCTACCAGGGCCTGACGGCGACGCTGAAACTCTTGCCGGGATATATCACTCATAACACTCTCCTTACATTTTTTGTTTTTAGTGTAGAGTCGGTTTTTGTACTTCTGGCGCGGTCGGTTGCgg < 6:66319/138‑1 (MQ=255)
ccGGGTTGCATTTGCTCTACCAGGGCCTGACGGCGACGCTGAAACTCTTGCCGGGATATATCACTCATAACACTCTCCTTACATTTTTTGTTTTTAGTGTAGAGTCGGTTTTTGTACTTCTGGCGCGGTCGGTTGCgg < 1:933015/138‑1 (MQ=255)
ccGGGTTGCATTTGCTCTACCAGGGCCTGACGGCGACGCTGAAACTCTTGCCGGGATATATCACTCATAACACTCTCCTTACATTTTTTGTTTTTAGTGTAGAGTCGGTTTTTGTACTTCTGGCGCGGTCGGTTGCgg < 2:630555/138‑1 (MQ=255)
ccGGGTTGCATTTGCTCTACCAGGGCCTGACGGCGACGCTGAAACTCTTGCCGGGATATATCACTCATAACACTCTCCTTACATTTATTGTTTTTAGTGTAGAGTCGGTTTTTGTACTTCTGGCGCGGTCGGTTGCgg < 6:679146/138‑1 (MQ=255)
ttGCATTTGCTCTACCAGGGCCTGACGGCGACGCTGAAACTCTTGCCGGGATATATCACTCATAACACTCTCCTTACATTTTTTGTTTTTAGTGTAGAGTCGGGTTTTGTACTTCAGGAGCGGGCGGGTGCGGATGAGTa > 4:3756/1‑140 (MQ=255)
tttGCTCTACCAGGGCCTGACGGCGACGCTGAAACTCTTGCCGGGATATATCACTCATAACACTCTCCTTACATTTTTTGTTTTTAGTGTAGAGTCGGTTTTTGTACTTCTGGCGCGGTCGGTTGCGGATGAGTAAAGgt > 4:561185/1‑140 (MQ=255)
ttctctACCAGGGCCTGACGGCGACGCTGAAACTCTTGCCGGGATATATCACTCATAACACTCTCCTTACATTTTTTGTTTTTAGTGTAGAGTCGGTTTTTGTACTTCTGGCGCGGTCGGTTGCGGATGAGTAAAGgtgt < 4:629857/138‑1 (MQ=255)
tgttctACCAGGGCCTGTAGGCGACGCTGTAACTCTTGCCGGTATATATCACTCATTAAACTCTCCTTTCATTTTTTGTTTTTAGTGTAGAGTCGGTTTTTGTACTTCTGGCTCGTGCTGTTGCGGATGAGTAAAGgt < 8:53204/135‑1 (MQ=255)
tGCTCTACCAGGGCCTGACGTCGACGCTGAAACTCTTGCCGGTATATATCACTCATAACACTCTCCTTACATTTTTTGTTTTTAGTGTAGAGTCGGTTTTTGTACTTCTGGCGCGGTCGGTTGCGGATGAGTAAAGgtgt < 4:600711/140‑1 (MQ=255)
tGCTCTACCAGGGCCTGACGGCGACGCTGAAACTCTTGCCGGGATATATCACTCATAACACTCTCCTTACATTTTTTGTTTTTAGTGTAGAGTCGGTTTTTGTACTTCTGGCGCGGTCGGTTGCGGATGAGTAAAGgtgt < 4:630653/140‑1 (MQ=255)
tGCTCTACCAGGGCCTGACGGCGACGCTGAAACTCTTGCCGGGATATATCACTCATAACACTCTCCTTACATTTTTTGTTTTTAGTGTAGAGTCGGTTTTTGTACTTCTGGCGCGGTCGGTTGCGGATGAGTAAAGgt < 7:624997/138‑1 (MQ=255)
tGCTCTACCAGGGCCTGACGGCGACGCTGAAACTCTTGCCGGGATATATCACTCATAACACTCTCCTTACATTTTTTGCTTTTAGTGTAGAGTCGGTTTTTGTACTTCTGGCGCGGTCGGTTGCGGATGAGTAAAGgt < 7:476418/138‑1 (MQ=255)
tGCTATACCAGGGCCTGACGGCGACGCTGAAACTCTTGCCGGGATATATCACTCATAACACTCTCCTTACATTTTTTGTTTTTAGTGTAGAGTCGGTTTTTGTACTTGTGGCGCGGTCGGTTGCGGATGAGTAAAGgt < 2:492482/138‑1 (MQ=255)
ctctACCAGGGCCTGACGGCGACGCTGAAACTCTTGCCGGTATATATCACTCATAACACTCTCCTTACATTTTTTGTTTTTAGTGTAGAGTCGGTTTTTGTACTTCTGGCGCGGTCGGTTGCGGATGAGTAAAGgtgt < 8:827185/138‑1 (MQ=255)
ctctACCAGGGCCTGACGGCGACGCTGAAACTCTTGCCGGGATATATCACTCATAACACTCTCCTTACATTTTTTGTTTTTAGTGTAGAGTCGGTTTTTGTACTTCTGGCGCGGTCGGTTGTGGATGAGTAAAGGTGTCg < 3:781150/140‑1 (MQ=255)
ctctACCAGGGCCTGACGGCGACGCTGAAACTCTTGCCGGGATATATCACTCATAACACTCTCCTTACATTTTTTGTTTTTAGTGTAGAGTCGGTTTTTGTACTTCTGGCGCGGTCGGTTGCGGATGAGTAAAGgtgt < 1:141928/138‑1 (MQ=255)
ctctACCAGGGCCGGACGGCGACGATGAACCTCTTGCCGGTATATATCAATCATAACACTCTCCTTACATTTTTTGTTTTTAGATTAGAGTCGGTTATTGTACTTCTGGCGCTGGCGGTAGCGGATGAGTAAAGgtgt < 2:876633/138‑1 (MQ=255)
ccAGGGCCTGACGGCGACGCTGAAACTCTTGCCGGGATATATCACTCATAACACTCTCCTTACATTTTTTGTTTTTAGTGTAGAGTCGGGTTTTGTACTTAATGCGCGGGCGGGTGGGGATGAGTTAATGTGTCGTGGCa > 4:293665/1‑140 (MQ=255)
cAGGGCCTGACGGCGACGCTGAAACTCTTGCCGGGATATATCACTCATAACACTCTCCTTACATTTTTTGTTTTTAGTGTTGAGTCGGTTTTTGTTCTTCTGGCGCGGGGGGTTGGGGTTTAGTTAAAgtgtgggggg > 5:627412/1‑132 (MQ=255)
cAGGGCCTGACGGCGACGCTGAAACTCTTGCCGGGATATATCACTCATAACACTCTCCTTACATTTTTTGTTTTTAGTGTAGAGTCGGGTTTTGTAATTGTTGCGCGGGGGGGTGGGGATGAGTTAAGGTGtggtggg > 5:500743/1‑137 (MQ=255)
cAGGGCCTGACGGCGACGCTGAAACTCTTGCCGGGATATATCACTCATAACACTCTCCTTACATTTTTTGTTTTTAGTGTAGAGTCGGGTTGTGTACTTCTGGGGCGGGCCGGTGCGGATGAGTTAACGGGtggtggg > 2:847803/1‑137 (MQ=255)
ggCCTGACGGCGACGCTGAAACTCTTGCCGGGATATATCACTCATAACACTCTCCTTACATTTTTTGTTTTTAGTGTAGAGTCGGGTTTTGTAGTTATGGGGCGGTGGGGTGCGGATGAGTTAAGGTGTCGGGGCATAAc > 3:409023/1‑140 (MQ=255)
cTGACGGCGACGCTGAAACTCTTGCCGGGATATATCACTCATAACACTCTCCTTACATTTTTTGTTTTTAGTGTAGAGTCGGTTTTTTTAATTCTGGCGCGGTCGGTTGCGGATGAGTAAAGGTGTCGTGGCATAACa > 2:98424/1‑138 (MQ=255)
cGGCGACGCTGAAACTCTTTCCGGGATATATCACTCATAACACTCTCCTTAGATTTTTTGTTATTAGTGTAGCGTCGGTTTTTGTACTTCTGGCGCGGTCGGGTGCGGATGAGTAAAGGTGTCGTGGCATAACAgcgc < 7:149865/138‑1 (MQ=255)
ccGCTGAAACTCTTGCCGGGATATTTCACTCATAACACTGTCCTTACTTTTTTTGTTTTTAGTGTAGAGACGGTTTTTGTACTTCTGGCGCGGTCGGTTGCTGATGAGTAAAGGTGTCGTGGCATAAGAGCGCGGCaa < 1:91879/137‑1 (MQ=255)
aCGCTGAAACTCTTGCCGGGATATATCACTCATAACACTCTCCTTACATTTTTTGTTTTTAGTGTAGAGTCGGTTTTTGTACTTCTGGCGCGGTCGGTTGCGGATGAGTAAAGGTGTCGTGGCATAACAGCGCGGCaa < 5:413614/138‑1 (MQ=255)
aCGCTGAAACTCTTGCCGGGATATATCACTCATAACACTCTCCTTACATTTTTTGTTTTTAGTGTAGAGTCGGTTTTTGTACTTCTGGCGCGGTCGGTTGCGGATGAGTAAAGGTGTCGTGGCATAACAGCGCGGCAaca < 4:357770/140‑1 (MQ=255)
gCTGAAACTCTTGCCGGGATATATCACTCATAACACTCTCCTTACATTTTTTGTTTTTAGTGTAGAGTCGGTTTTTGTACTTCTGGCGCGGTCGGTTGCGGATGAGTAAAGGTGTCGTGGCATAACAGCGCGGCAaca > 8:302184/1‑138 (MQ=255)
aaCTCTGTCCGGGATATATCACTCATAACACTCTCCTTACATTTTTTGTTTTTAGTGTAGCGTCGGTTTTTGTACTTCTGGCGCGGTCGGTTGCGGAGGAGTAAAGGTGTCGTGGGATAACAGCGCGGCAACACGGACGt < 4:166639/140‑1 (MQ=255)
ctTGCCGGGATATATCACTCATAACACTCTCCTTACATTTTTTGTTTTTAGTGTAGAGTCGGGTTTTGTACTTCTGGCGCGGTCGGTTGCGGATGAGTAAAGGTGTCGTGGCATAACAGCGCGGCAACACGGACGTAc < 5:274307/138‑1 (MQ=255)
ttGCCGGGATATATCACTCATAACACTCTCCTTACATTTTTTGTTTTTAGTGTAGAGTCGGTTTTTGTACTTCTGGCGCGGTCGGTTGCGGATGAGTAAAGGTGTCGTGGCATAACAGCGCGGCAACACGGACGTACt < 7:400015/138‑1 (MQ=255)
ttGCCGGGAGATATCACTCATAACACTCTCCTTACATATTTTGTTTTTAGTGTAGAGTCGGTGTTTGTGGTTATTGAGCGGTCAGGTTCGGATGAGTAAATGTGTCGTGGCATAACAGCGCGGCAACACGGACGTTCTCg > 4:255983/1‑140 (MQ=255)
ccGTGATATATCACTCATCACACTCTCCTTACATTTTTTGTTTTTAGTGTAGAGGCGGTTTTTGTACTTCTGGCGCGGTCGGTTGCGGATGAGTATAGGTGTCGTGGCATAACAGCGCGGCAACACGGACGTACTCga < 5:286838/138‑1 (MQ=255)
cGGGATATATCACTCATAACACTCTCCTTACATTTTTTGTTTTTAGTGTAGAGTCGGTTTTTGTACTTCTGGCGCGGTCGGTTGCGGATGAGTAAAGGTGTCGTGGCATAACAGCGCGGCAACACGGACGTACTCgat < 5:36726/138‑1 (MQ=255)
cGGGATATATCACTCATAACACTCTCCTTACATTTTTTGTTTTTAGTGTAGAGTCGGGTTTTTTTCTTCTTGCGCGGGCGGTGGCGGATGAGTTAATGTGTCGTGGGATAACAACGCGGCAACACCGACGTTCTCgat > 7:777939/1‑138 (MQ=255)
gggATATATCACTCATAACACTCTCCTTACATTTTTTGTTTTTAGTGTAGAGTCGGTTTTTGTACTTCTGGCGCGGTCGGTTGCGGATGAGTAAAGGTGTCGTGGCATAACAGCGCGGCAACACGGACGTACTCgatg < 6:229344/138‑1 (MQ=255)
atatatCACTCATAACACTCTCCTTACATTTTTTGTTTTTAGTGTAGAGTCGGGTTTTGTTATTCTGGGGCGGTGGGGTGCGGATGAGTAAAGGTGTCGTGGCCTAAAAGCGCGGCAACACCGACGTACTGGATGAacta > 3:735962/1‑139 (MQ=255)
tCATAACACTCTCCTTACATTTTTTGTTTTTAGTGTAGAGTCGGTTTTTGTACTTCTGGCGCGGTCGGTTGCGGATGAGTAAAGGTGTCGTGGCATAACAGCGCGGCAACACGGACGTACTCGATGATCTCTTCAAGc < 5:882561/138‑1 (MQ=255)
tCATAACACTCTCCTTACATTTTTTGTTTTTAGTGTAGAGTCGGTTTTTGTACTTCTGGCGCGGTCGGTTGCGGATGAGTAAAGGTGTCGTGGCATAACAGCGCGGCAACACGGACGTACTCGATGATCTCTTCAAGc < 8:200424/138‑1 (MQ=255)
actAACACTCTCCTTACATTTTTTGTTTTTAGTGTAGAGTCGGTTTTTGTACTTCTGGCGCGGTCGGGTGCTGATGAGTAAAGGTGTCGTGGCATAACAGCGCGGCAACACGGACGTACTCGATGATCTCTTCAAGCg < 2:40949/136‑1 (MQ=255)
aTAACACTCTCCTTACATTTTTTGTTTTTAGTGTAGAGTCGGGTTTTTTTCTTATGGGGCGGTCGGTTGCGGATGTGTAAATGTGTCGTGGCATAACCCCGCGGCGACACGGACGTACGAGATGATATCGTAAAGCGACa > 3:89335/1‑140 (MQ=255)
aaCACTCTCCTTACATTTTTTGTTTTTAGTGTAGAGTCGGTTTTTGTACTTCGGGCGCGGTCGGTTGCGGATGAGTAAAGGTGTCGTGGCATAACAGCGCGGCAACACGGCCGTACTCGCTGATCTCGTAACGCGACagt > 4:208179/1‑138 (MQ=255)
acTCTCCTTACTTTTTTTGTTTTTAGTGTAGAGTCGGTTTTTGTACTTCTGGCGCGGTCGGTTGCGGATGAGTAAAGGTGTCTTGGCATAACAGCGCGGCAACACGGACGTACTCGATGATCTCTTCAAGCGACAttt < 8:146411/138‑1 (MQ=255)
acTCTCCTTACATTTTTTGTTTTTAGTGTAGAGTCGGTTTTTGGACTTCTGGCGCGGTCGGTTGCGGATGAGTAAAGGTGTCGTGGCATAACAGCGCGGCAACACGGACGTACTCGATGATCTCTTCAAGCGACAttt < 7:306505/138‑1 (MQ=255)
tctcCTTACATTTTTTGTTTTTAGTGTAGAGTCGGTTTTTGTACTTCTGGCGCGGTCGGTTGCGGATGAGTAAAGGTGTCGTGGCATAACAGCGCGGCAACACGGACGTACTCGATGATCTCTTCAAGCGACATTTCa < 5:97046/138‑1 (MQ=255)
tctcCTTACATTTTTTGTTTTTAGTGTAGAGTCGGTTTTTGTACTTCTGGCGCGGTCGGTTGCGGATGAGTAAAGGTGTCGTGGCATAACAGCGCGGCAACACGGACGTACTCGATGATCTCTTCAAGCGACATTTCa < 1:659843/138‑1 (MQ=255)
ctcCTTACATTTTTTGTTTTTAGTGTAGCGTCTGTTTTTGTACTTCTGGCGCGGTCGGTTGCGGATGAGTAAAGGTGTCGTGGCATAACAGCGCGGCAACACGGACGTACTCGATGATCTCTTCAAGCGACATTTCaa < 8:557359/138‑1 (MQ=255)
ctcCTTACATTTTTTGTTTTTAGTGTAGAGTCGGTTTTTGTACTTCTGGCGCGGTCGGTTGCGGATGAGTAAAGGTGTCGTGGCATAACAGCGCGGCAACACGGACGTACTCGATGATCTCTTCAAGCGACATTTCaa < 2:72381/138‑1 (MQ=255)
ctcCTTACATTTTTTGTTTTTAGTGTAGAGTCGGTTTTTGTACTTCTGGCGCGGTCGGTTGCGGATGAGTAAAGGTGTCGGGGCATAACAGCGCGGCAACACGGACGTACTCGATGATCTCTTCAAGCGACATTTCaa < 1:368893/138‑1 (MQ=255)
ctcCTTACATTTTTTGTTTTTAGTGTAGAGTCGGTTTTTGTACTTCTGGCGCGGGCGGTTGCGGATGAGTAAAGGTGTCGTGGCATAACAGCGCGGCAACACGGACGTACTCGATGATCTCTTCAAGCGACATTTCAAGc < 3:329950/140‑1 (MQ=255)
tcCTTACATTTTTTGTTTTTAGTGTAGAGTCGGTTTTTGTACTTCTGGCGCGGTCGGTTGCGGATGAGTAAAGGTGTCGTGGCATAACAGCGCGGCAACACGGACGTACTCGATGATCTCTTCAAGCGACATTTCAAGct < 3:561185/140‑1 (MQ=255)
ccTTACATTTTTTGTTTTTAGTGTAGAGTCGGTTTTTGTTCTTATGGCGCGGTCGGTTGCGGATGAGTTAAGGTGTCGTGGCATAACAGCGCGGCAACACGGACGTACTCGATGATATCTTAAAGCGACAATTCAAGc > 6:97046/1‑138 (MQ=255)
ccTTACATTTTTTGTTTTTAGTGTAGAGTCGGTTTTTGTACTTCTGTCGCGGGCGGTTGCGGATGAGTAAACGTGTAGTGGCATAACATCCCGGCAACACGGACGTACTCGAAGATCTCTTAAAGCGACATTTCaaac > 8:249997/1‑136 (MQ=255)
ccTTACATTTTTTGTTTTTAGTGTAGAGTCGGTTTTTGTACGTCTGGCGCGGTCGGTTGCGGATGAGTAAAGGTGTCGGGGCATAACAGCGCGGCAACACGGACGTACTCGATGATCTCTTCAAGCGACATTTCAAGctc > 4:361835/1‑140 (MQ=255)
ccTTACATTTTTTGTTTTTAGTGTAGAGTCGGGGTTTGTTATTCTGGCGCGGTCGGTTGCGGATGAGTAAAGGGGTCGGGGCAGAACAGCGCGGCACCCCCGCCGTACTCGAAGAACTGGTCAAGCGCCAATTAAAGc > 7:93017/1‑138 (MQ=255)
cTTACATTTTTTGTTTTTAGTGTAGAGTCGGGTTTTGTACTACTGGGGCGGGCGGTTGCGGTTGAGTAAAGGTGTCGTGGCATAAAAGCGCGGCCACCCCGCCGGACTCGATGAACTCTTAAACCGCCAATTaaaccacg > 4:463260/1‑135 (MQ=255)
ttACATTTTTTGTTTTTAGTGTAGAGTCGGGTTTTGTACTTCTGGCGCGGTCGGTTGAGGATTAGTTAAGGTGTCGTGGCAAAAACGCGCGGCACCACCGACGTACTCGATGATCACTTAAAGCGACATTTAAAGctg > 8:406818/1‑137 (MQ=255)
aCATTTTTTGTTTTTAGTGTAGAGTCGGTTTTTGTACTTCTGGCGCGGTCGGTTGCGGATGAGTAAAGGTGTCGTGGCATAACAGCGCGGCAACACGGACGTACTCGATGATCTCTTCAAGCGACATTTCAAGCTCTTcc < 4:28874/140‑1 (MQ=255)
ttttttGTTTTTAGTGTAGAGTCGGGTTTTGTACTTAAGGCCCGGTCGGATGGGGATGAGTAAATGTGTCGTGGACTAACAGCCCGGCAACACCGACGTAAACGATTCTCTCATAAAGAGACAATTCAAGATCATCCTgt > 4:524241/1‑139 (MQ=255)
ttttGTTTTTAGTGTAGAGTCGGTTTTTTTAATTATGGCGCGGTCGGGTTGGGATGAGGAAAGGGGTAGTGGCAAAACAGCGCGGCACAACGGCCGGACTCGCAGTTCTCTTCACTCGACATTTAAAGCTATTACAGAta > 4:881380/1‑139 (MQ=255)
ttGTTTTTAGTGTAGAGTCGGGTTTTGTAAATATGGCGCGGTGGGGTTCGGATGAGGAAAAGTGTAGTGGGCTAACCGAGCCGCCACCCGGACTTACTCGATGTTCTGTTCAACCGACCATTCAAACTCGTccgtcgg > 2:790277/1‑133 (MQ=255)
gTTTTTAGTGTAGAGTCGGGTTTTGTAAGTATGGCGCGGTCGGTTGAGGATGAGGAAAGGTGTCGGGGCATAACAGCGCGGGAACACGGGCGTTCTCGAGGATTTCTTGAAGGGTCCTTTGAAGCTCTTCCGGAtctt > 8:281547/1‑138 (MQ=255)
tttAGTGTAGAGTCGGTTTTTGTACTTCTGGCGCGGTCGGTTGCGGATGAGTAAAGGTGTCGTGGCATAACAGCGCGGCAACACGGACGTACTCGATGATCTCTTCAAGCGACATTTCAAGCTCTTCCTGAtcttcgt < 7:178164/138‑1 (MQ=255)
tttAGTGTAGAGTCGGTTTTTGTACTTCTGGCGCGGTCGGTTGCGGATGAGTAAAGGTGTCGTGGCATAACAGCGCGGCAACACGGACGTACTCGATGATCTCTTCAAGCGACATTTCAAGCTCTTCCTGAtcttcgt < 1:263116/138‑1 (MQ=255)
ttAGTGTAGAGTCGGTTTTTGTACTTCTGGCGCGGTCGGTTGCGGATGAGGAAAGGTGGCGTGGCATAACAGCGCGGCAACACGGACGTACTCGATGATCTCTTCAAGCGACATTTCAAGCTCTTCCTGAtcttcgtc < 6:552953/138‑1 (MQ=255)
ttAGTGTAGAGTCGGTTTTTGTACTTCTGGCGCGGGCGGTTGCGGATGAGTAAAGGTGGCGTGGCATAACAGCGCGGCAACACGGACGTACTCGATGATCTCTTCAAGCGACATTTCAAGCTCTTCCTGAtcttcgtc < 6:552949/138‑1 (MQ=255)
ttttAGAGTCGGTTTTTGTACTTCTGTCTCTGGCGGATGCTGATGAGTAAAGGTGTCTTGGAATAACATAGCGGCAACTCTTACGTAATCGATGATCTCTTCAAGCGACATTTCAAGCTATTAATGATcttcgtcttcgt < 4:457796/137‑1 (MQ=255)
gtgtAGAGTCGGTTTTTGTACTTCTGGCGCGGTCGGGTGCGGATGAGTAAAGGTGTCGTGGCATAACAGCGCGGCAACACGGACGTACTCGATGATCTCTTCAAGCGACATTTCAAGCTCTTCCTGAtcttcgtcttc < 6:175719/138‑1 (MQ=255)
gggtAGCGTCGGTTTTTGTACTTCTGGCGCGGGCGGTTGCGGATGAGTAAAGGTGTCGTGGCATAACAGCGCGGCAACACGGACGTACTCGATGATCTCTTCAAGCGACATTTCAAGCTCTTCCTGAtcttcgtcttc < 8:516537/136‑1 (MQ=255)
gtAGAGTCGGTTTTTGTACTTCTGGCGCGGTCGGTTGCGGATGAGTAAAGGTGTCGTGGCATAACAGCGCTGCAACACGGACGTACTCGATGATCTCTTCAAGCGACATTTCAAGCTCTTCCTGATcttcgtcttcgt < 8:628482/138‑1 (MQ=255)
gtAGAGTCGGTTTTTGTACTTCTGGCGCGGTCGGTTGCGGATGAGTAAAGGTGTCGTGGCATAACAGCGCGGCAACACGGACGTACTCGATGATCTCTTCAAGCGACATTTCAAGCTCTTCCTGATcttcgtcttcgt < 1:110456/138‑1 (MQ=255)
gtAGAGTCGGTTTTTGTACTTCTGGCGCGGTAGGTTGCGGAAGAGTACAGGTGTCGTGGCATAACAGCGCGGCAACACGGACGTACTCGATTATCTCTTCAAGCGACATTTCAAGCTCTTCCTGATcttcgtcttcgt < 5:203474/138‑1 (MQ=255)
gagTCGGTTTTTGTACTTCTGGCGCGGTCGGTTGCGGATGAGTAAAGGTGTCGTGGCATAACAGCGCGGCAACACGGACGTACTCGATGATCTCTTCAAGCGACATTTCAAGCTCTTCCTGATCTTCGTCTTcgtcgt < 6:580460/138‑1 (MQ=255)
ttttACTTCTGGCGCGGTAGGTTGCTGATGCTTAATGGTGTAGTGGCATAACAGCGCGGCAACACGGACGTACTCGATGATCTCTTCAAGCGACATTTCAATCTCTTCCTGATCTTCGTCTTCGTCGTAACCCAACTg < 8:592158/135‑1 (MQ=255)
ttGTACTTCTGGCGCGGTCGGTTGCTGATGAGTAAAGGTGTCGTTGCATAACAGCGCGGCAAGACGGACGTACTCGATGATCTCTTCAAGCGACATTTCAAGCTCTTCCTGATCTTCGTCTTCGTCGTAACCCAACTg < 5:620510/138‑1 (MQ=255)
ttGTACTTCTGGCGCGGTCGGTTGCGGATGAGTAAAGGTGTCGTGGCATAACAGCTCGGCAACACGGACGTACTCGATGATCTCTTCAAGCGACATTTCAAGCTCTTCCTGATCTTCGTCTTCGTCGTAACCCAACTg < 1:848915/138‑1 (MQ=255)
ttGTACTTCTGGCGCGGTCGGTTGCGGATGAGTAAAGGTGTCGTGGCATAACAGCGCGGCAACACGGACGTACTCGATGATCTCTTCAAGCGACATTTCAAGCTCTTCCTGATCTTCGTCTTCGTCGTAACCCAACTgcg < 3:510976/140‑1 (MQ=255)
ttGTACTTCTGGCGCGGTCGGTTGCGGATGAGTAAAGGTGTCGTGGCATAACAGCGCGGCAACACGGACGTACTCGATGATCTCTTCAAGCGACATTTCAAGCTCTTCCTGATCTTCGTCTTCGTCGTAACCCAACTgcg < 4:309764/140‑1 (MQ=255)
ttGTACTTCTGGCGCGGTCGGTTGCGGATGAGTAAAGGTGTCGTGGCATAACAGCGCGGCAACACGGACGTACTCGATGATCTCTTCAAGCGACATTTCAAGCTCTTCCTGATCTTCGTCTTCGTCGTAACCCAACTgcg < 3:192592/140‑1 (MQ=255)
ttGTACTTCTGGCGCGGTCGGTTGCGGATGAGTAAAGGTGTCGTGGCATAACAGCGCGGCAACACGGACGTACTCGATGATCTCTTCAAGCGACATTTCAAGCTCTTCCTGATCTTCGTCTTCGTCGTAACCCAACTg < 5:82458/138‑1 (MQ=255)
ttGTACTTCTGGCGCGGTCGGTTGCGGATGAGTAAAGGGGTCGTGGCATAACAGCGCGGCAACACGGACGTACTCGATGATCTCTTCAAGCGACATTTCAAGCTCTTCCTGATCTTCGTCTTCGTCGTAACCCAACTgcg < 3:584324/140‑1 (MQ=255)
ttGTACTTCTGGCGCGGTCGGGTGCGGATGAGTAAAGGGGTCGTGGCATAACAGCGCGGCAAAACGGACGTACTAGATGATCTCTTCAAGCGACATTTCAAGCTCTTCCTGATCTTCGTCTTCGTCGTAACCCAACTg < 2:276962/138‑1 (MQ=255)
gTACTTCTGGCGCGGGCGGTTGCGGATGAGTAAAGGTGTCGTGGCATAACAGCGCGGCAACACGGACGTACTCGATGATCTCTTCAAGCGACATTTCAAGCGCTTCCTGATCTTCGTCTTCGTCGTAACCCAACTgcg < 5:245084/138‑1 (MQ=255)
tCTGGCGCGGTCGGTTGCGGATGAGTAAAGGTGTCGTGGCATAACAGCGCGGCAACACGGACGTACTCGATGATCTCTTCAAGCGACATTTCAAGCTCTTCCTGATCTTCGTCTTCGTCGTAACCCAACTGCGCGATGtt > 4:852155/1‑140 (MQ=255)
cTGGCGCGGTCGGTTGCGGATGAGTAAAGGTGTCGTGGCATAACAGCGCGGCAACACGGACGTACTCGATGATCTCTTCAAGCGACATTTCAAGCTCTTCCTGATCTTCGTCTTCGTCGTAACCCAACTGCGCGATGt < 7:421599/138‑1 (MQ=255)
tGGCGCGGTCGGTTGCGGATGAGTAAAGGTGTCGTGGCATAACAGCGCGGCAACACGGACGTACTCGATGATCTCTTCAAGCGACATTTCAAGCTCTTCCTGATCTTCGTCTTCGTCGTAACCCAACTGCGCGATGtt > 6:853120/1‑138 (MQ=255)
gcgcGGTCGGTTGCGGATGAGTAAAGGTGTCGTGGCATAACAGCGCGGCaa > 3:346836/1‑51 (MQ=255)
gcgcGGTCGGTTGCGGATGAGTAAAGGTGTCGTGGCATAACAGCGCGGCAACACGGACGTACTCGATGATCTCTTCAAGCGACATTTCAAGCTCTTCCTGATCTTCTTCTTCGTCGTAACCCAACTGCGCGATGTTACGc > 4:783194/1‑140 (MQ=255)
gcgGTCGGTTGCGGATGAGTAAAGGTGTCGTGGCATAACAGCGCGGCAACACGGACGTACTCGATGATCTCTTCAAGCGACATTTCAAGCTCTTCCTGATCTTCGTCTTCGTCGTAACCCAACTGCGCGATGTTACGc > 6:459534/1‑138 (MQ=255)
gtcggtTGCGGATGAGTAAAGGTGTCGTGGCATAACAGCGCGGCAACACGGACGTACTCGATGATCTCTTCAAGCGACATTTCAAGCTCTTCCTGATCTTCGTCTTCGTCGTAACCCAACTGCGCGATGTTACGCAGAtc > 3:502850/1‑140 (MQ=255)
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GCGCGGCGCTGCCGGGTTGCATTTGCTCTACCAGGGCCTGACGGCGACGCTGAAACTCTTGCCGGGATATATCACTCATAACACTCTCCTTACATTTTTTGTTTTTAGTGTAGAGTCGGTTTTTGTACTTCTGGCGCGGTCGGTTGCGGATGAGTAAAGGTGTCGTGGCATAACAGCGCGGCAACACGGACGTACTCGATGATCTCTTCAAGCGACATTTCAAGCTCTTCCTGATCTTCGTCTTCGTCGTAACCCAACTGCGCGATGTTACGCAGATC > NZ_CP022686/1674105‑1674382
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| Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
N/A
