mutation predictions | marginal predictions | summary statistics | genome diff | command line log
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breseq version 0.35.4 revision f352f80f4bc9
mutation predictions | marginal predictions | summary statistics | genome diff | command line log |
| Marginal read alignment evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NZ_CP009273 | 3,679,399 | 0 | G | T | 60.0% | 3.2 / 21.1 | 20 | N1045K (AAC→AAA) | bcsC | cellulose synthase complex outer membrane protein BcsC |
| * | NZ_CP009273 | 4,086,494 | 0 | T | G | 60.0% | ‑1.1 / 13.6 | 15 | Y102S (TAC→TCC) | rhaM | L‑rhamnose mutarotase |
| * | NZ_CP009273 | 4,101,671 | 0 | G | T | 60.0% | 5.9 / 19.9 | 15 | R158S (CGT→AGT) | yiiQ | YiiQ family protein |
| * | NZ_CP009273 | 4,101,675 | 0 | G | T | 60.0% | 0.6 / 20.8 | 15 | N156K (AAC→AAA) | yiiQ | YiiQ family protein |
| * | NZ_CP009273 | 1,379,045 | 0 | T | G | 58.3% | 3.8 / 10.9 | 12 | G224G (GGT→GGG) | ycjX | YcjX family protein |
| * | NZ_CP009273 | 3,679,388 | 0 | T | C | 56.5% | 10.1 / 28.0 | 23 | E1049G (GAG→GGG) | bcsC | cellulose synthase complex outer membrane protein BcsC |
| * | NZ_CP009273 | 1,673,561 | 0 | A | C | 56.2% | 7.6 / 12.9 | 16 | Y293S (TAC→TCC) | ydgH | DUF1471 family protein YdgH |
| * | NZ_CP009273 | 1,548,257 | 0 | T | G | 54.5% | 6.7 / 10.7 | 11 | Y557S (TAC→TCC) | maeA | malate dehydrogenase |
| * | NZ_CP009273 | 3,679,412 | 0 | T | C | 54.5% | 8.0 / 18.6 | 22 | E1041G (GAG→GGG) | bcsC | cellulose synthase complex outer membrane protein BcsC |
| * | NZ_CP009273 | 337,551 | 0 | C | G | 53.8% | 6.9 / 15.3 | 13 | A239G (GCG→GGG) | yahJ | amidohydrolase family protein |
| * | NZ_CP009273 | 645,910 | 0 | T | G | 53.8% | 9.9 / 13.9 | 13 | T13P (ACC→CCC) | citE | citrate (pro‑3S)‑lyase subunit beta |
| * | NZ_CP009273 | 1,819,318 | 0 | G | A | 53.8% | ‑0.2 / 11.3 | 13 | intergenic (‑124/+79) | ves/spy | environmental stress‑induced protein Ves/ATP‑independent periplasmic protein‑refolding chaperone Spy |
| * | NZ_CP009273 | 3,254,414 | 0 | A | C | 53.3% | 7.9 / 16.4 | 15 | V455G (GTG→GGG) | tdcE | 2‑ketobutyrate formate‑lyase/pyruvate formate‑lyase |
| * | NZ_CP009273 | 4,101,680 | 0 | T | C | 52.6% | 13.1 / 23.7 | 19 | K155E (AAA→GAA) | yiiQ | YiiQ family protein |
| * | NZ_CP009273 | 4,464,532 | 0 | T | G | 52.6% | 16.5 / 17.9 | 19 | *198G (TGA→GGA) | bdcR | TetR/AcrR family transcriptional regulator |
| * | NZ_CP009273 | 3,679,381 | 0 | A | C | 52.0% | 18.1 / 34.0 | 25 | G1051G (GGT→GGG) | bcsC | cellulose synthase complex outer membrane protein BcsC |
| * | NZ_CP009273 | 3,140,054 | 0 | C | T | 48.0% | 12.1 / 10.3 | 25 | A15T (GCA→ACA) | yghW | DUF2623 domain‑containing protein |