mutation predictions | marginal predictions | summary statistics | genome diff | command line log
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breseq version 0.29.0 revision 8f9c342918e4
mutation predictions | marginal predictions | summary statistics | genome diff | command line log |
| Marginal new junction evidence (lowest skew 10 of 935 shown) | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | = 4638329 | 110 (1.020) | 5 (0.050) | 4/168 | NT | 4.3% | coding (152/1353 nt) | creD | inner membrane protein |
| ? | NC_000913 | = 4638348 | 117 (1.150) | coding (171/1353 nt) | creD | inner membrane protein | |||||
| * | ? | NC_000913 | = 4637531 | 107 (0.990) | 7 (0.070) | 5/162 | NT | 6.4% | coding (836/1425 nt) | creC | sensory histidine kinase in two‑component regulatory system with CreB or PhoB |
| ? | NC_000913 | = 4637546 | 107 (1.090) | coding (851/1425 nt) | creC | sensory histidine kinase in two‑component regulatory system with CreB or PhoB | |||||
| * | ? | NC_000913 | = 4632481 | 121 (1.120) | 6 (0.060) | 5/172 | NT | 4.7% | coding (1749/1938 nt) | slt | lytic murein transglycosylase, soluble |
| ? | NC_000913 | = 4632501 | 129 (1.240) | coding (1769/1938 nt) | slt | lytic murein transglycosylase, soluble | |||||
| * | ? | NC_000913 | = 4626303 | 111 (1.030) | 4 (0.040) | 3/168 | NT | 3.4% | coding (392/1383 nt) | radA | DNA repair protein |
| ? | NC_000913 | = 4626336 | 120 (1.180) | coding (425/1383 nt) | radA | DNA repair protein | |||||
| * | ? | NC_000913 | 4617850 = | 133 (1.230) | 8 (0.080) | 6/170 | NT | 6.2% | coding (528/780 nt) | deoC | 2‑deoxyribose‑5‑phosphate aldolase, NAD(P)‑linked |
| ? | NC_000913 | 4617871 = | 115 (1.110) | coding (549/780 nt) | deoC | 2‑deoxyribose‑5‑phosphate aldolase, NAD(P)‑linked | |||||
| * | ? | NC_000913 | 4602596 = | 112 (1.040) | 7 (0.070) | 7/168 | NT | 6.3% | coding (263/771 nt) | yjjP | DUF1212 family inner membrane protein |
| ? | NC_000913 | 4602621 = | 101 (0.990) | coding (238/771 nt) | yjjP | DUF1212 family inner membrane protein | |||||
| * | ? | NC_000913 | 4593915 = | 123 (1.140) | 6 (0.060) | 4/166 | NT | 5.5% | coding (808/1362 nt) | lgoT | putative L‑galactonate:H+ symporter |
| ? | NC_000913 | 4593939 = | 93 (0.920) | coding (784/1362 nt) | lgoT | putative L‑galactonate:H+ symporter | |||||
| * | ? | NC_000913 | 4592992 = | 106 (0.980) | 9 (0.090) | 5/170 | NT | 8.4% | coding (1336/1656 nt) | tsr | methyl‑accepting chemotaxis protein I, serine sensor receptor |
| ? | NC_000913 | 4593015 = | 95 (0.920) | coding (1359/1656 nt) | tsr | methyl‑accepting chemotaxis protein I, serine sensor receptor | |||||
| * | ? | NC_000913 | = 4586197 | 102 (0.940) | 7 (0.070) | 5/170 | NT | 6.3% | coding (565/3513 nt) | hsdR | endonuclease R Type I restriction enzyme |
| ? | NC_000913 | = 4586236 | 110 (1.070) | coding (526/3513 nt) | hsdR | endonuclease R Type I restriction enzyme | |||||
| * | ? | NC_000913 | 4584195 = | 122 (1.130) | 15 (0.150) | 7/164 | NT | 11.9% | coding (2567/3513 nt) | hsdR | endonuclease R Type I restriction enzyme |
| ? | NC_000913 | 4584232 = | 109 (1.100) | coding (2530/3513 nt) | hsdR | endonuclease R Type I restriction enzyme | |||||