mutation predictions | marginal predictions | summary statistics | genome diff | command line log
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breseq version 0.29.0 revision 8f9c342918e4
mutation predictions | marginal predictions | summary statistics | genome diff | command line log |
| Marginal new junction evidence (lowest skew 10 of 396 shown) | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | = 4636330 | 132 (1.070) | 9 (0.080) | 6/164 | NT | 6.3% | coding (324/690 nt) | creB | response regulator in two‑component regulatory system with CreC |
| ? | NC_000913 | = 4636367 | 148 (1.300) | coding (361/690 nt) | creB | response regulator in two‑component regulatory system with CreC | |||||
| * | ? | NC_000913 | 4634391 = | 115 (0.930) | 7 (0.060) | 5/164 | NT | 6.1% | coding (595/648 nt) | ytjC | phosphatase |
| ? | NC_000913 | 4634423 = | 109 (0.960) | coding (627/648 nt) | ytjC | phosphatase | |||||
| * | ? | NC_000913 | 4630216 = | 107 (0.870) | 5 (0.040) | 5/164 | NT | 5.2% | coding (307/1668 nt) | ettA | energy‑dependent translational throttle A |
| ? | NC_000913 | 4630244 = | 84 (0.740) | coding (279/1668 nt) | ettA | energy‑dependent translational throttle A | |||||
| * | ? | NC_000913 | 4621160 = | 133 (1.080) | 7 (0.060) | 4/162 | NT | 5.5% | coding (278/720 nt) | deoD | purine nucleoside phosphorylase 1; nicotinamide 1‑beta‑D‑riboside phosphorylase |
| ? | NC_000913 | 4621189 = | 120 (1.070) | coding (307/720 nt) | deoD | purine nucleoside phosphorylase 1; nicotinamide 1‑beta‑D‑riboside phosphorylase | |||||
| * | ? | NC_000913 | 4614132 = | 153 (1.240) | 13 (0.120) | 9/160 | NT | 9.4% | coding (652/780 nt) | yjjV | putative DNase |
| ? | NC_000913 | 4614163 = | 114 (1.030) | coding (683/780 nt) | yjjV | putative DNase | |||||
| * | ? | NC_000913 | 4585553 = | 128 (1.040) | 2 (0.020) | 5/166 | NT | 1.8% | coding (1209/3513 nt) | hsdR | endonuclease R Type I restriction enzyme |
| ? | NC_000913 | 4585576 = | 101 (0.880) | coding (1186/3513 nt) | hsdR | endonuclease R Type I restriction enzyme | |||||
| * | ? | NC_000913 | 4557049 = | 129 (1.050) | 10 (0.090) | 9/162 | NT | 8.4% | coding (57/393 nt) | iraD | RpoS stabilzer after DNA damage, anti‑RssB factor |
| ? | NC_000913 | 4557077 = | 100 (0.890) | coding (85/393 nt) | iraD | RpoS stabilzer after DNA damage, anti‑RssB factor | |||||
| * | ? | NC_000913 | 4555361 = | 141 (1.140) | 12 (0.110) | 8/158 | NT | 8.8% | intergenic (+12/+129) | uxuR/yjiC | fructuronate‑inducible hexuronate regulon transcriptional repressor; autorepressor/uncharacterized protein |
| ? | NC_000913 | 4555390 = | 125 (1.140) | intergenic (+41/+100) | uxuR/yjiC | fructuronate‑inducible hexuronate regulon transcriptional repressor; autorepressor/uncharacterized protein | |||||
| * | ? | NC_000913 | 4554965 = | 127 (1.030) | 5 (0.040) | 4/162 | NT | 4.3% | coding (390/774 nt) | uxuR | fructuronate‑inducible hexuronate regulon transcriptional repressor; autorepressor |
| ? | NC_000913 | 4554993 = | 108 (0.960) | coding (418/774 nt) | uxuR | fructuronate‑inducible hexuronate regulon transcriptional repressor; autorepressor | |||||
| * | ? | NC_000913 | 4541922 = | 136 (1.100) | 8 (0.070) | 8/170 | NT | 5.9% | intergenic (+363/‑115) | fimB/fimE | tyrosine recombinase/inversion of on/off regulator of fimA/tyrosine recombinase/inversion of on/off regulator of fimA |
| ? | NC_000913 | 4541952 = | 126 (1.070) | intergenic (+393/‑85) | fimB/fimE | tyrosine recombinase/inversion of on/off regulator of fimA/tyrosine recombinase/inversion of on/off regulator of fimA | |||||