mutation predictions | marginal predictions | summary statistics | genome diff | command line log
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breseq version 0.33.1 revision 8505477f25b3
mutation predictions | marginal predictions | summary statistics | genome diff | command line log |
| Marginal new junction evidence (lowest skew 10 of 170 shown) | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | 6171392 = | 75 (1.150) | 3 (0.050) | 3/254 | NT | 3.5% | coding (910/1836 nt) | glmS | L‑glutamine/D‑fructose‑6‑phosphate aminotransferase |
| ? | NC_002947 | 6171430 = | 94 (1.500) | coding (872/1836 nt) | glmS | L‑glutamine/D‑fructose‑6‑phosphate aminotransferase | |||||
| * | ? | NC_002947 | = 6096455 | 81 (1.240) | 3 (0.050) | 3/248 | NT | 4.1% | coding (243/1416 nt) | pycA | pyruvate carboxylase subunit A |
| ? | NC_002947 | = 6096480 | 66 (1.080) | coding (218/1416 nt) | pycA | pyruvate carboxylase subunit A | |||||
| * | ? | NC_002947 | 6075927 = | 94 (1.440) | 4 (0.060) | 4/250 | NT | 4.5% | coding (635/2289 nt) | PP_5328 | phosphate ABC transporter permease |
| ? | NC_002947 | 6075982 = | 82 (1.330) | coding (580/2289 nt) | PP_5328 | phosphate ABC transporter permease | |||||
| * | ? | NC_002947 | = 6066931 | 62 (0.950) | 3 (0.050) | 3/246 | NT | 4.5% | coding (1055/1308 nt) | phoR | two‑component system sensor histidine kinase |
| ? | NC_002947 | = 6066963 | 69 (1.140) | coding (1087/1308 nt) | phoR | two‑component system sensor histidine kinase | |||||
| * | ? | NC_002947 | 6058676 = | 85 (1.310) | 3 (0.050) | 3/238 | NT | 4.0% | coding (1873/2079 nt) | recG | junction‑specific ATP‑dependent DNA helicase |
| ? | NC_002947 | 6058745 = | 66 (1.130) | coding (1942/2079 nt) | recG | junction‑specific ATP‑dependent DNA helicase | |||||
| * | ? | NC_002947 | = 6033714 | 80 (1.230) | 3 (0.050) | 3/250 | NT | 3.8% | coding (37/1212 nt) | dfp | bifunctional 4'‑phosphopantothenoylcysteine decarboxylase/phosphopantothenoylcysteine synthetase |
| ? | NC_002947 | = 6033742 | 78 (1.270) | coding (65/1212 nt) | dfp | bifunctional 4'‑phosphopantothenoylcysteine decarboxylase/phosphopantothenoylcysteine synthetase | |||||
| * | ? | NC_002947 | 6000091 = | 88 (1.350) | 3 (0.050) | 3/254 | NT | 3.5% | coding (626/1428 nt) | PP_5256 | cyclic nucleotide‑binding protein |
| ? | NC_002947 | 6000130 = | 81 (1.290) | coding (665/1428 nt) | PP_5256 | cyclic nucleotide‑binding protein | |||||
| * | ? | NC_002947 | = 5987423 | 73 (1.120) | 3 (0.050) | 3/246 | NT | 4.7% | coding (505/1788 nt) | kefB‑III | glutathione‑regulated potassium/H+ antiporter |
| ? | NC_002947 | = 5987457 | 53 (0.870) | coding (539/1788 nt) | kefB‑III | glutathione‑regulated potassium/H+ antiporter | |||||
| * | ? | NC_002947 | 5981512 = | 84 (1.290) | 3 (0.050) | 3/256 | NT | 3.8% | coding (2157/5049 nt) | PP_5242 | GAF domain‑containing sensor histidine kinase |
| ? | NC_002947 | 5981582 = | 71 (1.130) | coding (2227/5049 nt) | PP_5242 | GAF domain‑containing sensor histidine kinase | |||||
| * | ? | NC_002947 | 5955002 = | 67 (1.030) | 3 (0.050) | 3/256 | NT | 4.8% | coding (1/1296 nt) | PP_5219 | membrane protein |
| ? | NC_002947 | 5955047 = | 54 (0.860) | intergenic (‑45/‑62) | PP_5219/elbB | membrane protein/putative hydrolase | |||||