Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A9 F255 I0 R1
|
121 |
91.8 |
4500463 |
95.1% |
4279940 |
99.8 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
freq |
annotation |
gene |
description |
| RA |
NC_000913 |
4,370,616 |
A→G |
27.9% |
intergenic (‑204/‑72) |
yjeH ← / → groS |
putative transporter/Cpn10 chaperonin GroES, small subunit of GroESL |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NC_000913 | 4,370,616 | 0 | A | G | 27.9%
| 131.5
/ 62.0
| 96 | intergenic (‑204/‑72) | yjeH/groS | putative transporter/Cpn10 chaperonin GroES, small subunit of GroESL |
| Reads supporting (aligned to +/- strand): ref base A (27/42); new base G (10/17); total (37/59) |
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 |
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 |
TGAGGTGAATCAGGGTTTTCACCCGATTTTGTGCTGATCAGAATTTTTTTTCTTTTTCCCCCTTGAAGGGGCGAAGCCTCATCCCCATTTCTCTGGTCACCAGCCGGGAAACCACGTAAGCTCCGGCGTCACCCATAACAGATACGGACTTTCTCAAAGGAGAGTTATCAATGAATATTCGTCCATTGCATGATC > NC_000913/4370518‑4370712
|
aatgtgaggtgaatcagggttttcacccgattttgtgctgatcagaattttttttctttttcccccttgaaggggcgaagcctcatccccatttGGTCAc < 2:821579‑M2/6‑1 (MQ=255)
atgtgaggtgaatcagggttttcacccgattttgtgctgatcagaattttttttctttttcccccttgaaggggcgaagcctcatccccatttGGTCAcc < 2:878975‑M2/7‑1 (MQ=255)
gAATCAGGGTTTTCACCCGATTTTGTGCTGATCAGAATTTTTTTTCTTTTTCCCCCTTGAAGGGGCGAAGCCTCATCCCCATTTCTCTGGTCGCCAGCCg < 1:1289447/100‑1 (MQ=255)
gAATCAGGGTTTTCACCCGATTTTGTGCTGATCAGAATTTTTTTTCTTTTTCCCCCTTGAAGGGGCGAAGCCTCATCCCCATTTCTCTGGTCACCAGCCg < 2:302615/100‑1 (MQ=255)
ggtgaatcagggttttcacccgattttgtgctgatcagaattttttttctttttcccccttgaaggggcgaagcctcatccccatttGGTCACCAGCCgg > 1:1549403‑M2/88‑100 (MQ=255)
ggtgaatcagggttttcacccgattttgtgctgatcagaattttttttctttttcccccttgaaggggcgaagcctcatccccatttGGTCACCAGCCgg > 2:1307543‑M2/88‑100 (MQ=255)
aaTCAGGGTTTTCAACCGAGTTTGTGCTGATCAGAATTTTTTTTCTTTTTCCCCCTTGAAGGGGCGAAGCCTCTTCCCCATTTCTCTGGTCGCCAGCCg < 2:5183/99‑1 (MQ=255)
aTCAGGGTTTTCACCCGATTTTGTGCTGATCAGAATTTTTTTTCTTTTTCCCCCTTGAAGGGGCGAAGCCTCATCCCCATTTCTCTGGTCACCAGCCggg < 2:1091528/100‑1 (MQ=255)
aTCAGGGTTTTCACCCGATTTTGTGCTGATCAGAATTTTTTTTCTTTTTCCCCCTTGAAGGGGCGAAGCCTCATCCCCATTTCTCTGGTCACCAGCCggg < 2:326562/100‑1 (MQ=255)
tgaatcagggttttcacccgattttgtgctgatcagaattttttttctttttcccccgtgaaggggcgaagcctcatccccatttGGTCACCAGCCggg < 1:1768952‑M2/14‑1 (MQ=255)
aGGGTTTTCACCCGATTTTGTGCTGATCAGAATTTTTTTTCTTTCTCCCCCTTGAAGGGGCGAAGCCTCATCCCCATTTCTCTGGTCACCAGCCGGGaaa > 2:893669/1‑100 (MQ=255)
gggTTTTCACCCGATTTTGTGCTGATCAGAATTTTTTTTCTTTTTCCCCCTTGAAGGGGCGAAGCCTCATCCCCATTTCTCTGGTCACCAGCCGGGAAAc < 2:2189321/100‑1 (MQ=255)
atcagggttttcacccgattttgtgctgatcagaattttttttctttttcccccttgaaggggcgaagcctcatccccatttGGTCACCAGCCGGGAAAc < 2:194226‑M2/18‑1 (MQ=255)
ggTTTTCACCCGATTTTGTGCTGATCAGAATTTTTTTTCTTTTTCCCCCTTGAAGGGGCGAAGCCTCATCCCCATTTCTCTGGTCGCCAGCCGGGAAAcc < 1:477005/100‑1 (MQ=255)
agggttttcacccgattttgtgctgatcagaattttttttctttttcccccttgaaggggcgaagcctcatccccatttGGTCACCAGCCGGGAAACCAc > 2:338802‑M2/80‑100 (MQ=255)
gttttctcccgattttgtgctgatcagaattttttttctttttcccccttgaaggggcgaagcctcatccccatttGGTCACCAGCCGGGAAACCACGTa < 2:1218128‑M2/24‑1 (MQ=255)
gttttcacccgattttgtgctgatcagaattttttttctttttcccccttgaaggggcgaagcctcatccccatttGGTCACCAGCCGGGAAACCACGTa < 2:1684998‑M2/24‑1 (MQ=255)
aCCCGATTTTGTGCTGATCAGAATTTTTTTTCTTTTTCCCCCTTGAAGGGTATACGCCTCATCCCCATTTC‑‑‑‑GTCAAAAGCCGGAAAACAACGTAATCTcc > 1:1161336/1‑100 (MQ=255)
cccGATTTTGTGCTGATCAGAATTTTTTTTCTTTTTCCCCCTTGAAGGGGCGAAGCCTCATCCCCATTTCTCTGGTCACCAGCCGGGAAACCACGTAAGc < 2:852658/100‑1 (MQ=255)
gATTTTGTGCTGATCAGAATTTTTTTTCTTTTTCCCCCTTGAAGGGGCGAAGCCTCATCCCCATTTCTCTGGTCACCAGCCGGGAAACCACGTAAGCTc < 1:1954354/99‑1 (MQ=255)
acccgattttgtgctgatcagaattttttttctttttcccccttgaaggggcgaagcctcatccccatttGGTCACCAGCCGGGAAACCACGTAAGc > 1:2231396‑M2/71‑97 (MQ=255)
cccgattttgtgctgatcagaattttttttctttttcccccttgaaggggcgaagcctcatccccatttGGTCACCAGCCGGGAAACCACGTAAGCTCCg > 1:1415267‑M2/70‑100 (MQ=255)
ccgattttgtgctgatcagaattttttttctttttcccccttgaaggggcgaagcctcatccccatttGGTCACCAGCCGGGAAACCACGTAAGCTCCgg < 1:1605138‑M2/32‑1 (MQ=255)
cgattttgtgctgatcagaattttttttctttttcccccttgaaggggcgaagcctcatccccatttGGTCACCAGCCGGGAAACCACGTAAGCTCCGGc < 2:1689963‑M2/33‑1 (MQ=255)
ttGTGCTGATCAGAATTTTTTTTCTTTTTCCCCCTTGAAGGGGCGAAGCCTCATCCCCATTTCTCTGGTCGCCAGCCGGGAAACCACGTAAGCTCCGGCg < 1:1864954/100‑1 (MQ=255)
ttGTGCTGATCAGAATTTTTTTTCTTTTTCCCCCTTGAAGGGGCGAAGCCTCATCCCCATTTCTCTGGTCACCAGCCGGGAAACCACGTAAGCTCCGGCg < 2:2085094/100‑1 (MQ=255)
ttGTGCTGATCAGAATTTTTTTTCTTTTTCCCCCTTGAAGGGGCGAAGCCTCATCCCCATTTCTCTGGTCACCAGCCGGGAAACCACGTAAGCTCCGGCg < 1:942159/100‑1 (MQ=255)
ttGTGCTGATCAGAATTTTTTTTCTTTTTCCCCCTTGAAGGGGCGAAGCCTCATCCCCATTTCTCTGGTCACCAGCCGGGAAACCACGTAAGCTCCGGCg < 2:1846226/100‑1 (MQ=255)
gattttgtgctgatcagaattttttttctttttcccccttgaaggggcgaagcctcatccccatttGGTCACCAGCCGGGAAACCACGTAAGCTCCGGCg < 1:2072886‑M2/34‑1 (MQ=255)
tgtgCTGATCAGAATTTTTTTTCTTTTTCCCCCTTGAAGGGGCGAAGCCTCATCCCCATTTCTCTGGTCGCCAGCCGGGAAACCACGTAAGCTCCGGCGt > 1:142805/1‑100 (MQ=255)
tgCTGATCAGAATTTTTTTTCTTTTTCCCCCTTGAAGGGGCGAAGCCTCATCCCCATTTCTCTGGTCGCCAGCCGGGAAACCACGTAAGCTCCGGCGTCa < 1:842723/100‑1 (MQ=255)
ttgtgctgatcagaattttttttctttttcccccttgaaggggcgaagcctcatccccatttGGTCACCAGCCGGGAAACCACGTAAGCTCCGGCGTCAc > 2:1898305‑M2/63‑100 (MQ=255)
gCTGATCAGAATTTTTTTTTTTTTTTTTTCTTTAATAGGCGAAGCATCATCTCCATTTCTCTGTTCACCAGCCGGGGAACCACGTAAGCTCCGGCGTCAc > 2:1338936/1‑100 (MQ=255)
tgtgctgatcagaattttttttctttttcccccttgaaggggcgaagcctcatccccatttGGTCACCAGCCGGGAAACCACGTAAGCTCCGGCGTCAc < 2:2224295‑M2/38‑1 (MQ=255)
cTGATCAGAATTTTTTTTCTTTTTCCCCCTTGAAGGGGCGAAGCCTCATCCCCATTTCTCTGGTCACCAGCCGGGAAACCACGTAAGCTCCGGCGTCAcc < 1:492073/100‑1 (MQ=255)
cTGATCAGAATTTTTTTTCTTTTTCCACCTTAAAAGGGCAAAGCCTCATCTCCATTTCTCTGCTCGCCAGCCGGGAAACCACGTAACCTCCGGCTTCAc > 2:557825/1‑99 (MQ=255)
tGATCAGAATTTTTTTTCTTTTTCCCCCTTGAAGGGGCGAAGCCTCATCCCCATTTCTCTGGTCGCCAGCCGGGAAACCACGTAAGCTCCGGCGTCAccc > 2:1287135/1‑100 (MQ=255)
gATCAGAATTTTTTTTCTTTTTCCCCCTTGAAGGGGCGAAGCCTCATCCCCATTTCTCTGGTCGCCAGCCGGGAAACCACGTACGCTCCGGCGCCACCCa > 2:1305991/1‑100 (MQ=255)
gATCAGAATTTTTTTTCTTTTTCCCCCTTGAAGGGGCGAAGCCTCATCCCCATTTCTCTGGTCGCCAGCCGGGAAACCACGTAAGCTCCGGCGTCACCCa < 2:2201149/100‑1 (MQ=255)
aTCAGAATTTTTTTTTTTTTTTTTTCTTGAAGGGGAGAAGCCTCATCCCCATTTCTCTGGTCACCAGCCGGGAAACCACGTAAGCTCCTGCGTCACCCAt > 2:1452792/1‑100 (MQ=255)
aTCAGAATTTTTTTTCTTTTTCCTCCTTGAAGGGGCGAAGCCTCATCCCCATTTCTCTGGTCACCAGCCGGGAAACCACGTAAGCTCCTGCGTCACCCAt > 2:1452917/1‑100 (MQ=255)
cAGAATTTTTTTTCTTTTTCCCCCTTGGAGGGGCGAAGCCTCATCCCCATTTCTCTGGTCGCCAGCCGGGAAACCACGTAAGCTCCGGCGTCAccc < 2:1071479/96‑1 (MQ=255)
gAATTTTTTTTCTTTTTTTTTTTTTAAGTGGCGAAGCCTCATCCCCATTTCTCTGGTCACCAGCCGGGAAACCACGTAAGCTCCGGCGTCACCCATa > 2:151684/1‑97 (MQ=255)
gAATTTTTTTTCTTTTTCCCCCTTGAAGGGGCGAAGCCTCATCCCTATTTCTCTGGTCACCAGCCGGGAAACCTCGTAAGCTCCGGCGTCACCCATAACa < 2:68876/100‑1 (MQ=255)
gAATTTTTTTTCTTTTTCCCCCTTGAAGGGGCGAAGCCTCATCCCCATTTCTCTGGTCACCAGCCGGGAAACCACGTAAGCTCCGGCGTCACCCATAACa < 1:227400/100‑1 (MQ=255)
aatttttttttCTTTTTCCCCCTTGAAGGGGCGAAGCCTCATCCCCATTTCTCTGGTCGCCAGCCGGGAAACCACGTAAGCTCCGGCGTCACCCATAACa < 1:876719/97‑1 (MQ=255)
cagaattttttttctttttcccccttgaaggggcgaagcctcatccccatttGGTCACCAGCCGGGAAACCACGTAAGCTCCGGCGTCACCCATAACAGa < 1:338801‑M2/48‑1 (MQ=255)
agaagtttttgtattgttcccccttgaaggggcgaagcctcatccccatgtGGTCACCAGCCGGGAAACCACGTAAGCTCCGGCGTCACCCATAGCa < 1:486136‑M2/46‑1 (MQ=255)
tttttttCTTTTTCCCCCTTGAAGGGGCGAAGCCTCATCCCCATTTCTCTGGTCGCCAGCCGGGAAACCACGTAAGCTCCGGCGTCACCCATAACAGATa < 1:1741366/100‑1 (MQ=255)
attttttttctttttcccccttgaaggggcgaagcctcatccccatttGGTCACCAGCCGGGAAACCACGTAAGCTCCGGCGTCACCCATAACAGATACg > 1:2189170‑M2/49‑100 (MQ=255)
tttctttttcCCCCTTGAAGGGGCGAAGCCTCATCCCCATTTCTCTGGTCGCCAGCCGGGAAACCACGTAAGCTCCGGCGTCACCCATAACAGATACGGa < 1:1715295/100‑1 (MQ=255)
tttctttttcCCACTTGAATGGAAAAACCCACATATATATTAATCTGGTCGCCAGCCGGTGAACCACGTAATCTCAGGCGTCACCCATAACAGAt > 2:531532/1‑95 (MQ=255)
ttttcCCCCTTGAAGGGGCGAAGCCTCATCCCCATTTCTCTGGTCACCAGCCGGGAAACCACGTAAGCTCCGGCGTCACCCATAACAGATACGGACTTtc < 1:678148/100‑1 (MQ=255)
ttctttttctcccttgaaggggcgaagcctcatccccatttGGTCACCAGCCGGGAAACCACGTAAGCTCCGGCGTCACCCATAACAGATACGGACTTtc < 1:103051‑M2/59‑1 (MQ=255)
ttctttttcccccttgaaggggcgaagcctcatccccatttGGTCACCAGCCGGGAAACCACGTAAGCTCCGGCGTCACCCATAACAGATACGGACTTtc > 1:211252‑M2/42‑100 (MQ=255)
ttctttttcccccttgaaggggcgaagcctcatccccatttGGTCACCAGCCGGGAAACCACGTAAGCTCCGGCGTCACCCATAACAGATACGGACTTtc < 1:453028‑M2/59‑1 (MQ=255)
ttcCCCCTTGAAGGGGCGAAGCCTCATCCCCATTTCTCTGGTCACCAGCCGGGAAACCACGTAAGCTCCGGCGTCACCCATAACAGATACGGACTTtctc < 1:515360/100‑1 (MQ=255)
tttttcccccttgaaggggcgaagcctcatccccatttGGTCACCAGCCGGGAAACCACGTAAGCTCCGGCGTCACCCATAACAGATACGGACTTTCTCa < 1:2027822‑M2/62‑1 (MQ=255)
tcCCCCTTGAAGGGGCGAAGCCTCATCCCCATTTCTCTGGTCGCCAGCCGGGAAACCACGTAAGCTCCGGCGTCACCCATAACAGATACGGACTTTCTCa < 1:474669/100‑1 (MQ=255)
ttcccccttgaaggggcgaagcctcatccccatttGGTCACCAGCCGGGAAACCACGTAAGCTCCGGCGTCACCCATAACAGATACGGACTTTCTCAAAg < 1:8911‑M2/65‑1 (MQ=255)
tcccccttgaaggggcgaagcctcatccccatttGGTCACCAGCCGGGAAACCACGTAAGCTCCGGCGTCACCCATAACAGATACGGACTTTCTCAAAgg > 2:1244835‑M2/35‑100 (MQ=255)
ccTTGAAGGGGCGAAGCCTCATCCCCATTTCTCTGGTCACCAGCCGGGAAACCACGTAAGCTCCGGCGCCACCCATAACAGATACGGACTTTCTCAAAgg > 1:860783/1‑100 (MQ=255)
cccccttgaaggggcgaagcctcctccccatttGGTCACCAGCCGGGAAACCACGTAAGCTCCGGCGGCACCCATAACACATACGGACTTACTCAAAGga < 2:2231078‑M2/67‑1 (MQ=255)
cTTGAAGGGGCGAAGCCTCATCCCCATTTCTCTGGTCGCCAGCCGGGAAACCACGTAAGCTCCGGCGTCACCCATAACAGATACGGACTTTCTCAAAgg < 2:132997/99‑1 (MQ=255)
ttGAAGGGGCGAAGCCTCATCCCCATTTCTCTGTTCGCCAGCCGGGAAACCACGTAAGCTCCGGCGTCACCCATAACAGATACGGACTTTCTCAAAGgag > 2:1482655/1‑100 (MQ=255)
cccttgaaggggcgaagcatcatccccatttGGTCACCAGCCGGGAAACCACGTAAGCTCCGTCATAACCCATAACAGAAACGGACTTCGTCAAAGgag > 2:447790‑M2/32‑99 (MQ=255)
aaGGGGCGAAGCCTCATCCCCATTTCTCTGGTCGCCAGCCGGGAAACCACGTAAGCTCCGGCGTCACCCATAACAGATACGGACTTTCTCAAAGGAGAGt > 2:1927965/1‑100 (MQ=255)
ngCGAAGCAACATCCCCATTTCTCTAGTCACCAGCCGGGAAACAACATAAGCTCCGGCGTCACCCATAACAGATACGGACTTTCTAAAAGGAGAGtt > 2:2097131/2‑97 (MQ=255)
ggCGAAGCCTCATCCCCATTTCTCTGGTCGCCAGCCGGGAAACCACGTAAGCTCCGGCGTCACTCATAACAGATACGGACTTTCTCAAAGGAGAGTTATc < 2:1541629/100‑1 (MQ=255)
gCGAAGCCTCATCCCCATTTCTCTGGTCGCCAGCCGGGAAACCACGTAAGCACCGGCGTCACCCATAACAGATACGGACTTTCTCAAAGGAGAGTTATCa < 1:759490/100‑1 (MQ=255)
aaGCCTCATCCCCATTTCTCTGGTCACCAGCCTGGAAACCACGTAAGCTCCGGCGTCACCCATAACAGATACGGACTTTCTCAAAGGAGAGTTATCAATg < 2:819268/100‑1 (MQ=255)
aaGCCTCATCCCCATTTCTCTGGTCACCAGCCGGGAAACCACGTAAGCTCCGGCGTCACCCATAACAGATACGGACTTTCTCAAAGGAGAGTTATCAATg > 2:341297/1‑100 (MQ=255)
gcgaagcctcatccccatttGGTCACCAGCCGGGAAACCACGTAAGCTCCGGCGTCACCCATAACAGATACGGACTTTCTCAAAGGAGAGTTATCAATGa < 1:1653019‑M2/80‑1 (MQ=255)
gCCTCATCCCCATTTCTCTGGTCGCCAGCCGGGAAACCACGTAAGCTCCGGCGTCACCCATAACAGATACGGACTTTCTCAAAGGAGAGTTATCAATGaa > 1:613096/1‑100 (MQ=255)
gCCTCATCCCCATTTCTCTGGTCGCCAGCCGGGAAACCACGTAAGCTCCGGCGTCACCCATAACAGATACGGACTTTCTCAAAGGAGAGTTATCAATGa < 1:640596/99‑1 (MQ=255)
gCCTCATCCCCATTTCTCTGGTCGCAAGCCGGGAAACCACGTAAGCTCCGGCGTCACCCATAACAGATACGGACTTTCTCAAAGGAGAGTTATCAATGaa > 2:588388/1‑100 (MQ=255)
cTCATCCCCATTTCTCTGGTCACCAGCCGGGAAACCACGTAAGCTCCGGCGTCACCCATAACAGATACGGACTTTCTCAAAGGAGAGTTATCAATGAata > 1:1614436/1‑100 (MQ=255)
cATCCCCATTTCTCTGGTCACCAGCCGGGAAACCACGTAAGCTCCGGCGTCACCCATAACAGATACGGACTTTCTCAAAGGAGAGTTATCAATGAATAtt < 1:1634114/100‑1 (MQ=255)
tCCCCATTTCTCTGGTCGCCAGCCGGGAAACCACGTAAGCTCCGGCGTCACCCATAACAGATACGGACTTTCTCAAAGGAGAGTTATCAATGAATATTCg > 1:1657820/1‑100 (MQ=255)
tCCCCATTTCTCTGGTCACCAGCCGGGAAACCACGTAAGCTCCGGCGTCACCCATAACAGATACGGACTTTCTCAAAGGAGAGTTATCAATGAATATTCg < 1:893670/100‑1 (MQ=255)
ctcatccccatttGGTCACCAGCCGGGAAACCACGTAAGCTCCGGCGTCACCAATAACAGATACACACTTTCTCAAAGTAGAGTTATCAATAAatat > 1:852079‑M2/14‑97 (MQ=255)
cccATTTCTCTGGTCACCAGCCGGGAAACCACGTAAGCTCCGGCGTCACCCATAACAGATACTGACTTTCTCAAAGGAGAGTTATCAATGAATATTCGTc > 1:2173689/1‑100 (MQ=255)
catccccatttGGTCACCAGCCGGGAAACCACGTAAGCTCCGGCGTCACCCATAACAGATACGGACTTTCTCAAAGGAGAGTTATCAATGAATATTCGTc < 2:211252‑M2/89‑1 (MQ=255)
catccccatttGGTCACCAGCCGGGAAACCACGTAAGCTCCGGCGTCACCCATAACAGATACGGACTTTCTCAAAGGAGAGTTATCAATGAATATTCGTc > 1:2128082‑M2/12‑100 (MQ=255)
catccccatttGGTCACCAGCCGGGAAACCACGTAAGCTCCGGCGTCACCCATAACAGATACGGACTTTCTCAAAGGAGAGTTATCAATGAATATTCGTc < 1:1244840‑M2/89‑1 (MQ=255)
ccATTTCTCTGGTCACCAGCCGGGAAACCACGTAAGCTCCGGCGTCACCCATAACAGATACGGACTTTCTCAAAGGAGAGTTATCAATGAATATTCGTcc < 1:1248029/100‑1 (MQ=255)
tccccatttGGTCACCAGCCGGGAAACCACGTAAGCTCCGGCGTCACCCATAACAGATACGGACTTTCTCAAAGGAGAGTTATCAATGAATATTCGTCCa < 2:1225759‑M2/91‑1 (MQ=255)
cccatttGGTCACCAGCCGGGAAACCACGTAAGCTCCGGCGTCACCCATAACAGATACGGACTTTCTCAAAGGAGAGTTATCAATGAATATTCGTCCAtt > 2:513776‑M2/8‑100 (MQ=255)
catttGGTCACCAGCCGGGAAACCACGTAAGCTCTGGCGTCACCCATAACAGATACGGACTTTCTCAAAGGAGAGTTATCAATGAATATTCGTCCATTGc > 2:587330‑M2/6‑100 (MQ=255)
catttGGTCACCAGCCGGGAAACCACGTAAGCTCCGGCGTCACCCATAACAGATACGGACTTTCTCAAAGGAGAGTTATCAATGAATATTCGTCCATTGc < 1:578260‑M2/95‑1 (MQ=255)
ctctGGTCACCAGCCGGGAAACCACGTAAGCTCCGGCGTCACCCATAACAGATACGGACTTTCTCAAAGGAGAGTTATCAATGAATATTCGTCCATTGCa < 1:411092/100‑1 (MQ=255)
tctGGTCGCCAGCCGGGAAACCACGTAAGCTCCGGCGTCACCCATAACAGATACGGACTTTCTCAAAGGAGAGTTATCAATGAATATTCGTCCATTGCAt < 1:1891385/100‑1 (MQ=255)
tGGTCGCCAGCCGGGAAACCACGTAAGCTCCGGCGTCACCCATAATAGATACGGACTTTCTCAAAGGAGAGTTATCAATGAATATTCGTCCATTGCATg < 2:312909‑M2/98‑1 (MQ=255)
tGGTCACCAGCCGGGAAACCACGTAAGCTCCGGCGTCACCCATAACAGATACGGACTTTCTCAAAGGAGAGTTATCAATGAATATTCGTCCATTGCATGa > 1:41771‑M2/2‑100 (MQ=255)
nggTCACCAGCCGGGAAACCACGTAAGCTCCGGCGTCACCCATAACAGATACGGACTTTCTCAAAGGAGAGTTATCAATGAATATTCGTCCATTGCATGa > 2:244596/2‑100 (MQ=255)
gTCACCAGCCGGGAAACCACGTAAGCTCCGGCGTCACCCATAACAGATACGGACTTTCTCAAAGGAGAGTTATCAATGAATATTCGTCCATTGCATGATc < 2:609725/100‑1 (MQ=255)
|
TGAGGTGAATCAGGGTTTTCACCCGATTTTGTGCTGATCAGAATTTTTTTTCTTTTTCCCCCTTGAAGGGGCGAAGCCTCATCCCCATTTCTCTGGTCACCAGCCGGGAAACCACGTAAGCTCCGGCGTCACCCATAACAGATACGGACTTTCTCAAAGGAGAGTTATCAATGAATATTCGTCCATTGCATGATC > NC_000913/4370518‑4370712
|
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
N/A
