Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A10 F13 I0 R1
|
150 |
9496.0 |
7621532 |
98.4% |
7499587 |
136.2 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
freq |
annotation |
gene |
description |
| RA |
NZ_CP022686 |
3,797,481 |
T→G |
21.4% |
L130V (TTA→GTA) |
CIW80_RS19065 → |
LacI family DNA‑binding transcriptional regulator |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NZ_CP022686 | 3,797,481 | 0 | T | G | 21.4%
| 172.6
/ 22.7
| 129 | L130V (TTA→GTA) | CIW80_RS19065 | LacI family DNA‑binding transcriptional regulator |
| Reads supporting (aligned to +/- strand): ref base T (25/74); new base G (24/6); total (49/80) |
| Fisher's exact test for biased strand distribution p-value = 1.47e-07 |
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 |
Only 100 of 139 total aligned reads displayed.
CCAGCTCCCGCTTTATGCAGTCGTTGCAGCAGGTGCTTAATAAAAATGAATTCCAGCTACTGCTTGGGTGTCATGAGTATAATCAGCTCAAAGAAGCTGAAATTCTGATGACGCTTCTTCAAGGCAACCCGGCGGCGTTAGTTATTTTTGGTTCTCAGTTGGCTGATAAAACTCACCAGATACTCGAGAAAACAAATATACCTACCGTTAACGTTGTCGGTTCCCCTTTCAGTCCGGCTCAAATTACCATCGAAACAGCATTTTTTGAAGCAT > NZ_CP022686/3797344‑3797616
|
ccAGCTCCCGCTTTATGCAGTCGTTGCAGCAGGTGCTTAATAAAAATGAATTCCAGCTACTGCTTGGGTGTCATGAGTATAATCAGCTCAAAGAAGCTGAAATTCTGATGACGCTTCTTCAAGGCAACCCGGCGGCgtta < 8:255148/140‑1 (MQ=255)
cTCCCGCTTTATGCAGTCGTTGCAGCAGGTGCTTAATAAAAATGAATTCCAGCTACTGCTTGGGTGTCATGAGTATAATCAGCTCAAAGAAGCTGAAATTCTGATGACGCTTCTTCAAGGCAACCCGGCGGCgttatgtt > 4:480164/1‑136 (MQ=255)
cTCCCGCTTTATGCAGTCGTTGCAGCAGGAGCTTAATAAAAATGAATACCACCTACTGCTTGCGTCTCATGAGTATAATCAGCTCAAAGCAGCTGAAATACTGATGACGCTTCTTCAAGGCAACCCGGCGGCgttagttt > 8:677546/1‑139 (MQ=255)
cTCCCGCTTTATGCAGTCGTTGCAGAAGGTGCTTAATAAAAATGAATTCCAGCTACTGCTTGGGTGTCATGAGTATAATCAGCTCAAAGAAGCTGAAATTCAGTTGACGCTTCTTCAAGGCAACCCGGCGGCgtttttta > 1:702983/1‑135 (MQ=255)
cGCTTTATGCAGTCGTTGCAGCAGGTGCTTAATAAAAATGAATTCCAGCTACTGCTTGGGTGTCATGAGTATAATCAGCTCAAAGAAGCTGAAATTCTGATGACGCTTCTTCAAGGCAACCCGGCGGCGTTAGTTAtttt < 3:16453/140‑1 (MQ=255)
gCTTTATGCAGTCGTTGCAGCAGGTGCTTAATAAAAATGAATTCCAGCTACTGCTTGGGTGTCATGAGTATAATCAGCTCAAAGAAGCTGAAATTCTGATGACGCTTCTGCAAGGCAACCCGGCGGCGTTTGTTAttttt > 5:401806/1‑140 (MQ=255)
cTTTATGCAGTCGTTGCAGCAGGTGCTTAATAAAAATGAATTCCAGCTACTGCTTGGGTGTCATGAGTATAATCAGCTCAAAGAAGCTGCAATTCTGATGACGCTTCTTCAAGGCAACCCGGCGGCGGTTTTTAtttttt > 2:17958/1‑139 (MQ=255)
tATGCAGTCGTTGCAGCAGGTGCTTAATAAAAATGTATTCCAGCTACTGCTTGGGTGTCATGAGTATAATCAGCTCAAAGAAGCTGAAATTCTGATGACGCTTCTTCAAGGCAACCCGGCGGCGTTAGTTATTTTTGGtt < 5:87105/140‑1 (MQ=255)
tATGCAGTCGTTGCAGCAGGTGCTTAATAAAAATGAATTCCAGCTACTGCTTGGGTGTCATGAGTATAATCAGCTCAAAGAAGCTGAAATTCTGATGACGCTTCTTCAAGGCAACCCGGCGGCGTTAGTTATTTTTGGtt < 6:468146/140‑1 (MQ=255)
tATGCAGTCGTTGCAGCAGGTGCTTAATAAAAATGAATTCCAGCTACTGCTTGGGTGTCATGAGTATAATCAGCTCAAAGAAGCTGAAATTCTGATGACGCTTCTTCAAGGCAACCCGGCGGCGTTAGTTATTTTTGGtt < 6:360162/140‑1 (MQ=255)
tATGCAGTCGTTGCAGCAGGTGCTTAATAAAAATGAATTCCAGCTACTGCTTGGGTGTCATGAGTATAATCAGCTCAAAGAAGCTGAAATTCTGATGACGCTTCTTCAAGGCAACCCGGCGGCGTTAGTTATTTTTGGtt < 7:680340/140‑1 (MQ=255)
tATGCAGTCGTTGCAGCAGGTGCTTAATAAAAATGAATTCCAGCTACTGCTTGGGTGTCATGAGTATAATCAGCTCAAAGAAGCTGAAATTCTGATGACGCTTCTTCAAGGCAACCCGGCGGCGTTAGTTATTTTTGGtt < 3:932352/140‑1 (MQ=255)
tCGTTGCAGCAGGTGCTTAATAAAAATGAATTCCAGCTACTGCTTGGGTGTCATGAGTATAATCAGCTCAAAGACGCTGAAATTCTGATGACGCTTCTTCAAGGCAACCCGGCGGCGGTATGTTTTTTTGGttgagagtt > 3:783012/1‑133 (MQ=255)
tCGTTGCAGCAGGTGCTTAATAAAAATGAATTCCAGCTACTGCTTGGGTGTCATGAGTATAATCAGCTCAAAGAAGCTGAAATTCTGATGACGCTTCTTCAAGGCAACCCGGCGGCGTTTGTTATTTTTGGTTATCAAtt > 3:375925/1‑140 (MQ=255)
ggtGCAGCAGGTGCGTAATAAAAATGAATTCCAGCTACTGCTTGGGTGTCATGAGTATAATCAGCTCAAAGAAGCTGAAATTCTGATGACGCTTCTTCAAGGCAACCCGGCGGCGTTAGTTATTTTTGGTTCTCAGTTgg < 7:670836/138‑1 (MQ=255)
ttGCAGCAGGTGCTTAATAAAAATGAATTCCAGCTACTGCTTGGGTGTCATGAGTATAATCAGCTCAAAGAAGCTGAAATTCTGATGACGCTTCTTCAAGGCAACCCGGCGGCGTTAGTTATTTTTGGTTCTCAGTTGGc < 4:506177/140‑1 (MQ=255)
gtGCAGCAGGTGCTTAATAAACAAGAAGTCAAGCTACTGCTTGGGTGGCATGAGTATAATCACCGCTATGAAGCTGAAATTCTGATGACGCTTCTTCAAGGCAAGCCTGCGGCGTTAGTTATTTTTGGTTCTCAGTTGGc < 4:543278/139‑1 (MQ=255)
gcagcaGGTGCTTAATAAAAATGAATTCCAGCTACTGCTTGGGTGTCATGAGTATAATCAGCTCAAAGAAGCTGAAATTCTGATGACGCTTCTTCAAGGCAACCCGGCGGCGTTAGTTATTTTTGGTTCTCATTTGGGTg > 5:935141/1‑140 (MQ=255)
gcagcaGGTGCTTAATAAAAATGAATTCCAGCTACTGCTTGGGTGTCATGAGTATAATCAGCTCAAAGAAGCTGAAATTCTGATGACGCTTCTTCAAGGCAACCCGGCGGCGGTTTTTATTTTTTGGTGTCAGTTggggg > 6:736309/1‑137 (MQ=255)
cagcagGTGCTTAATAAAAATGAATTCCAGCTACTGCTTGGGTGTCATGAGTATAATCAGCTCAAAGAAGCTGAAATTCTGATGACGCTTCTTCAAGGCAACCCGGCGGCGTTAGTTATTTTTGGTTCTCAGTTGGCTGa < 8:80936/140‑1 (MQ=255)
cagcagGTGCTTAATAAAAATGAATTCCAGCTACAGCTTGGGTGTCATGAGTATAATCAGCTCAAAGAAGCTGAAATTCTGATGACGCTTCTTCAAGGCAACCCGGCGGCGGTAGTTATTTTTGGTTCTCAGTTGGCTGa < 6:834745/140‑1 (MQ=255)
gTGCTTAATAAAAATGAATTCCAGCTACTGCTTGGGTGTCATGAGTATAATCAGCTCAAAGAAGCTGAAATTCTGATGACGCTTCTTCAAGGCAACCCGGCGGCGGTAGTTATTTTTTGTTATCAGTTGGCTGATaaaaa > 3:696337/1‑139 (MQ=255)
gTGCTTAATAAAAATGAATTCCAGCTACTGCTTGGGTGTCATGAGTATAATCAGCTCAAAGAAGCTGAAATTCTGATGACGCTTCTTCAAGGCAAACCGGCGGCGTTAGTTTTTTTTTGGTGTAAGGTGGCTGATAATAc > 7:461924/1‑140 (MQ=255)
tGCTTAATAAAAATGAATTCCAGCTACTGCTTGGGTGTCATGAGTATAATCAGCTCAAAGAAGCTGAAATTCTGATGACGCTTCTTCAAGGCAACCCGGCGGCGTTAGTTATTTTTGGTTCTCAGTTGGCTGATAAAACt < 5:564196/140‑1 (MQ=255)
tGCTTAATAAAAATGAATTCCAGCTACTGCTTGGGTGTCATGAGTATAATCAGCTCAAAGAAGCTGAAATTCTGATGACGCTTCTTCAAGGCAACCCGGCGGCGTTAGTTATTTTTGGTTCTCAGTTGGCTGATAAAACt < 7:794423/140‑1 (MQ=255)
gCTTAATAAAAATGAATTCCAGCTACTGCTTGGGTGTCATGAGTATAATCAGCTCAAAGAAGCTGAAATTCTGATGACGCTTCTTCAAGGCAACCCGGCGGCGTTTTTTTTTTTTTGGTGTGAGTTGGCTGCTTAAACta > 5:593666/1‑139 (MQ=255)
taataaAAATGAATTCCAGCTACTGCTTGGGTGTCATGAGTATAATCAGCTCAAAGAAGCTGAAATTCTGATGACGCTTCTTCAAGGCAACCCGGCGGCGTTAGTTATTTTTGGTTCTCAGTTGGCTGATAAAACTCAcc < 8:335169/140‑1 (MQ=255)
taataaAAATGAATTCCAGCTACTGCTTGGGTGTCATGAGTATAATCAGCTCAAAGAAGCTGAAATTCTGATGACGCTTCTTCAAGGCAACCCGGCGGCGGTATTTTTTTTTTGTTATCAATTGGCTGATtaaaaaaacc > 3:298356/1‑134 (MQ=255)
aaaTGAATTCCAGCTACTGCTTGGGTGTCATGTGTATAATCAGCTCAAAGAAGCTGAAATTCTGATGACGCTTCTTCAAGGCAACCCGGCGGCGTTAGGTTTTTTTGGTTCTCAGTTGGCTGATAAAACTCACCAGATAc > 2:404433/1‑140 (MQ=255)
ttCCAGCTACTGCTTGGGTGTCATGCGTATAATCAGCTCAAAGAAGCTGAAATTCTGATGCCGCTTCTTCAAGGCAACCCGGCGGCGTTAGTTATTTTTGGTTCTCAGTTGGCTGATAAAACTCACCAGATACTCGAGaa < 6:590711/140‑1 (MQ=255)
ttCCAGCTACTGCTTGGGTGTCATGAGTATACTCAGCTCTAAGAAGCTGAAATTCTGATGTCGCTTCTTCAAGGCAACCCGGCGGCGTTAGTTATTTTTGGTTCTCAGGTGGATGATAAAACTCACCAGATACTCGAGaa < 8:487053/140‑1 (MQ=255)
ttCCAGCTACTGCTTGGGTGTCATGAGTATAATCAGCTCAAAGAAGCTGAAATTCTGATGACGCTTCTTCAAGGCAACCCGGCGGCGTTAGTTATTTTTGGTTCTCAGTTGGCTGATAAAACTCACCAGATACTCGAGaa < 3:122036/140‑1 (MQ=255)
ttCCAGCTACTGCTTGGGTGTCATGAGTATAATCAGCTCAAAGAAGCTGAAATTCTGATGACGCTTCTTCAAGGCAACCCGGCGGCGTTAGTTATTTTTGGTTCTCAGTTGGCTGATAAAACTCACCAGATACTCGAGaa < 7:733279/140‑1 (MQ=255)
ttCCAGCTACTGCTTGGGTGTCATGAGTATAATCAGCTCAAAGAAGCTGAAATTCTGATGACGCTTCTTCAAGGCAACCCGGCGGCGTTAGTTATTTTTGGTTCTCAGTTGGCTGATAAAACTCACCAGATACTCGAGaa < 3:803374/140‑1 (MQ=255)
ttCCAGCTACTGCTTGGGTGTCATGAGTATAATCAGCTCAAAGAAGCTGAAATTCTGATGACGCTTCTTCAAGGCAACCCGGCGGCGTTAGTTATTTTTGGTTCTCAGTTGGCTGATAAAACTCACCAGATACTCGAGaa < 1:227474/140‑1 (MQ=255)
ttCCAGCTACTGCTTGGGTGTCATGAGTATAATCAGCTCAAAGAAGCTGAAATTCTGATGACGCTTCTTCAAGGCAACCCGGCGGCGTTAGTTATTTTTGGTTCTCAGTTGGCTGATAAAACTCACCAGATACTCGAGaa < 3:647637/140‑1 (MQ=255)
ttCCAGCTACTGCTTGGGTGTCATGAGTATAATCAGCTCAAAGAAGCTGAAATTCTGATGACGCTTCTTCAAGGCAACCCGGCGGCGTTAGTTATTTTTGGTTCTCAGTTGGCTGATAAAACTCACCAGATACTCGAGaa < 2:377851/140‑1 (MQ=255)
ttCCAGCTACTGCTTGGGTGGAATGAGTATAAGCAGCTCAAAGAAGCTGAAATTCTGATGACGCTTCTTCAAGGCAACCCGGCGGCGTTAGTTATTTTTGGTTCTCAGTTGGCTGATAAAACTCACCAGATACTCGAGaa < 5:223270/140‑1 (MQ=255)
ccAGCTACTGCTTGGGTGTCATGAGTATAATCAGCTCAAAGAAGCTGAAATTCTGATGACGCTTCTTCAAGGCAACCCGGCGGCGTTAGTTATTTTTGGTTCTCAGTTGGCTGATAAAACTCACCAGATACTCGAGaaaa < 3:794167/140‑1 (MQ=255)
ccAGCTACTGCTTGGGTGTCATGAGTATAATCAGCTCAAAGAAGCTGAAATTCTGATGACGCTTCTTCAAGGCAACCCGGCGGCGTTAGTTATTTTTGGTTCTCAGTTGGCTGATAAAACTCACCAGATACTCGAGaaaa < 6:348230/140‑1 (MQ=255)
ccAGCTACTGCTTGGGTGTCATGAGTATAATCAGCTCAAAGAAGCTGAAATTCTGATGACGCTTCTTCAAGGCAACCCGGCGGCGGTAGTTATTTTTGGTTCTCAGTTGGCTGATAAAACTCACCAGATACTCGAGaaaa < 8:736738/140‑1 (MQ=255)
ccAGCTACTGCTTGGGTGTCATGAGTATAATCAGCTCAAAGAAGCTGAAATTCTGATGACGCTTCTTCAAGGCAACCCGGCGGCGGTAGTTATTTTTGGTTCTCAGTTGGCTGATAAAACTCACCAGATACTCGAGaaaa < 8:759229/140‑1 (MQ=255)
gCTACTGCTTGGGTGTCATGAGTATAATCAGCTCAAAGAAGCTGAAATTCTGATGACGCTTCTTCAAGGCACCCCGGCGGCGGTATGTATTTTTGGGTGGCAGGTGGCTGATAAAACGAACCCGATACGCGAGAAAACaa > 6:614652/1‑140 (MQ=255)
cTACTGCTTGGGTGTCATGAGTATAATCAGCTCAAAGAAGCTGAAATTCTGATGACGCTTCTTCAAGGCAACCCGGCGGCGTTAGTTATTTTTGGTTCTCAGTTGGCTGATAAAACTCACCAGATACTCGAGAAAACaaa < 3:743438/140‑1 (MQ=255)
cTACTGCTTGGGTGTCATGAGTATAATCAGCTCAAAGAAGCTGAAATTCTGATGACGCTTCTTCAAGGCAACCCGGCGGCGTTAGTTATTTTTGGTTCTCAGTTGGCTGATAAAACTCACCAGATACTCGAGAAAACaaa < 4:2878/140‑1 (MQ=255)
cTGCGTGGGTGTCATGAGTATAATCAGCTCAAAGAAGCTGAAATTCTGATGACGCTTCTTCAAGGCAACCCGGCGGCGTTAGTTATTTTTGGTTCTCAGTTGGCTGATAAAACTCACCAGATACTCGAGAAAACAAatat < 1:396331/140‑1 (MQ=255)
gttGGGTGTCATGAGTATAATCAGCTAAAAGTTGCTTAATTTATGATGACGCTTCTTCAAGGCAACCCGGCGGAGTTAGTTTTTTTTGGTTGTCAGTTGGATGATAAATATCTCCAGATACTCGTGATTACTAATAtacc < 6:34180/139‑1 (MQ=255)
cTTGGGTGTCATGAGTATAATCAGCTCAAAGAATCTGAAATTCTGATGACGCTTCTTCAAGTCAACCCGGCGGCGTTAGTTATTTTTGGTTCTCAGTTGGCTGATAAAACTCACCAGATACTCGAGAAAACAAATAtacc < 3:129917/140‑1 (MQ=255)
cTTGGGTGTCATGAGTATAATCAGCTCAAAGAAGCTGAAATTCTGATGACGCTTCTTCAAGGCAACCCGGCGGCGTTAGTTATTTTTGGTTCTCAGTTGGCTGATAAAACTCACCAGATACTCGAGAAAACAAATAtacc < 7:104434/140‑1 (MQ=255)
cTTGGGTGTCATGAGTATAATCAGCTCAAAGAAGCTGAAATTCTGATGACGCTTCTTCAAGGCAACCCGGCGGCGTTAGTTATTTTTGGTTCTCAGTTGGCTGATAAAACTCACCAGATACTCGAGAAAACAAATAtacc < 7:544441/140‑1 (MQ=255)
aTGAGTATAATCAGCTCAAAGAAGCTGAAATTCTGATGACGCTTCTTCAAGGCAACCCGGCGGCGGTTTTTTTTTTTTGTTGTGAGTTGGGGGATTAAACTAACCAGAAACACGAGAAAAAAAATATACCTACCggttaa > 1:859729/1‑135 (MQ=255)
aTGAGTATAATCAGCTCAAAGAAGCTGAAATTCTGATGACGCTTCTTCAAGGCAACCCGGCGGCGGTACTTTATATTGGGTCTCAGTTGGCTGATAAAACTCCCCCGCTAAAACAGAAAACCAAAATACAGACCCTTAAc > 5:760548/1‑140 (MQ=255)
aGTATAATCAGCTCAATGTAGATGAAATTCTGTTGAGGCTTCTTCAAGGCAACACGGCGGCGTTTGTTTTTTTTGGTTGTCAGTTGGCTGATTAAACTCTCCAGATACTAGAGATAACAAATATACCTACCGTTAACGtt < 6:930162/140‑1 (MQ=255)
tataATCAGCTCAAAGAAGCTGAAATTCTGATGACGCTTCTTCAAGGCAACCCGGCGGCGTTAGTTATTTTTGGTTCTCAGTTGGCTGATAAAACTCACCAGATACTCGAGAAAACAAATATACCTACCGTTAACGTTGt < 6:267728/140‑1 (MQ=255)
tataATCAGCTCAAAGAAGCTGAAATTCTGATGACGCTTCTTCAAGGCAACCCGGCGGCGGTAGTTATTTTTGGTTGTCAGTTGGGGGATAAAACTCACCAGAAAAGCGAGAAAAAAAAAATACCTAACGTTTAAGTTGt > 6:662165/1‑140 (MQ=255)
aTCAGCTCAAAGAAGCTGAAATTCTGATGACGCTTCTTCAAGGCAACCCGGCGGCGTTAGTTATTTTTGGTTCTCAGTTGGCTGATAAAACTCACCAGATACTCGAGAAAACAAATATACCTACCGTTAACGTTGTCGGt < 7:301920/140‑1 (MQ=255)
aTCAGCTCAAAGAAGCTGAAATTCTGATGACGCTTCTTCAAGGCAACCCGGCGGCGGTAGTTTTTTTTGGTTCTGAGGTGGCTGATTAAACACACCCGATACTCGAGCAAACAAAAATAACTACCGTTTAAGTTGTGGGt > 5:328098/1‑140 (MQ=255)
tCAGCTCAAAGAAGCTGAAATTCTGATGACGCTTCTTCAAGGCAACCCGGCGGCGTTTGTTATTTTTGGGTGTCAGTTGGCTGATAAAACTCACCAGATACTCGAGAAAACAAATATACCTACCGTTTACGTTGTCGGtt > 4:795459/1‑140 (MQ=255)
cAGCTCAAAGAAGCTGAAATTCTGATGACGCTTCTTCAAGGCAACCCGGCGGCGTTAGTTATTTTTGGTTCTCAGTTGGCTGATAAAACTCACCAGATACTCGAGAAAACAAATATACCTACCGTTAACGTTGTCGGTTc < 3:173501/140‑1 (MQ=255)
aGCTCAAAGAACATTAAATTCTGATGACGATTCTTCCAGGCAACCCGGCGTCGTTAGTTATTTTTGGGTCTCAGTTGTCTGATAAAACTCACCAGATACTCGAGAAAACAAATATACCTACCGTTAACGTTGTCGGTTcc < 6:20672/140‑1 (MQ=255)
gCTCAAAGAAGCTGAAATTCTGATGACGCTTCTTCAAGGCAACCCGGCGGCGTTAGTTATTTTTGGTTCTCAGTTGGCTGATAAAACTCACCAGATACTCGAGAAAACAAATAtacc < 1:534942/117‑1 (MQ=255)
gCTCAAAGAAGCTGAAATTCTGATGACGCTTCTTCAAGGCAACCCGGCGGCGTTAGTTATTTTTGGTTCTCAGTTGGCTGATAAAACTCACCAGATACTCGAGAAAACAAATAtacc > 2:534942/1‑117 (MQ=255)
gCTCAAAGAAGCTGAAATTCTGATGACGCTTCTTCAAGGCAACCCGGCGGCGTTAGTTATTTTTGGTTCTCAGTTGGCTGATAAAACTCACCAGATACTCGAGAAAACAAATATACCTACCGTTAACGTTGTCGGTTccc > 4:691204/1‑140 (MQ=255)
gCTCAAAGAAGCTGAAATTCTGATGACGCTTCTTCAAGGCAACCCGGCGGCGGTTTTTTTTTTTGTTTCTACGTTTGGGGGTTAAACTCACCAGCTTCTCGAGCAAACAAATATAACAACCGGTATCCTTTGCGGTTcgc > 3:655411/1‑138 (MQ=255)
gCTCAAAGAAGCTGAAATTCTGATGACGCTTCTTCAAGGCAACCCGGCGGCGGTAGTTTTTTTTTGGTATGAGTTGGCTGTTAAAACACCCCAGATAAGCGAGAAAAAAAAAATAACGAACGTTAACGTTGTCgggtgcc > 8:29566/1‑135 (MQ=255)
gCTCAAAGAAGCTGAAATTCTGATGACGCTTCTTCAAGGCAACCCGGCGGCGGTAGGTATTTTTTGGTGTCAGTTGGGGGATAAAACACAACACCTACTCGAGAAAAAAAATATAACTAACGGTAAAGTAGTCGGGTccc > 8:804957/1‑140 (MQ=255)
cTCAAAGAAGCTGAAATTCTGATGACGCTTCTTCAAGGCAACCCGGCGGTGTTTGTTATTTTTTGGTGTGAGTTGGCTGATTAAAATGACCAGATTCTCCAGAAAACAAATATAACTACCCGTTACGTTGTGGGttgacc > 3:481140/1‑136 (MQ=255)
cTCAAAGAAGCTGAAATTCTGATGACGCTTCTTCAAGGCAACCCGGCGGCGTTAGTGATTTTTGGTTATCAGTTGGCTGATAAAAATCACCAGATACTCGAGAAAACAAATATACCTACCGTTAACGGTGTGGGTTaccc > 2:583994/1‑140 (MQ=255)
cTCAAAGAAGCTGAAATTCTGATGACGCTTCTTCAAGGCAACCCGGCGGCGGTTGTTATTTTTGGTTCTCAGTTGGGGGATAAAACAGCCCCGCTACTCGAGAAAACAAATATACCTACCGTTAACGTTGTGGGGTcccc > 5:111262/1‑140 (MQ=255)
cTCAAAGAAGCTGAAATTCTGATGACGCTTCTTCAAGGCAACCCGGCGGCGGTATTTATTTTTTGGTCTCAGTTGGCTGATAAAACGCACCAGCAACACCAGAAAACAAATATAACTAACCTTAACCTTGTAGGGTcccc > 8:444194/1‑140 (MQ=255)
cTCAAAGAAGCTGAAATTCTGATGACGCTTCTTCAAGGCAACCCGGCGGCGGTAGGTATTTTTGGGTATGAGGTGGCGGGTAAAACTCACCCGCTACACGAGAAAACAAAAATTCCGTCCGGTTAAGTGGTCGGGTgccc > 8:769218/1‑140 (MQ=255)
cTCAAAGAAGCTGAAATTCTGATGACGCTTCTTCAAGGCAACCCGGCGGCGGGTGTTTTTTTTGGGTGTGAGTTGGGGGGTAAAACTCACCCGCTACACGAGAAAACCAATATAACAACCGGTAACGTTGTGGGTTgccc > 4:154763/1‑140 (MQ=255)
cTCAAAGAAGCTGAAATTCTGATGACGCTTCTTCAAGGCAACCCGGCGGCGGGTGTTTTTTTTGGGTGGGTGTTGGCTGAGAAAACTCCCCCGCTTATCGGGTAAACAAATAAAACGACCGGGTAAGTTGTGGGTTgccc > 7:356713/1‑140 (MQ=255)
aaaGAAGCTGAAATTCTGATGACGCTTCTTCAAGGCAACCCGGCGGAGTTAGTTATTTTTGGTTCTCAGTTGGCTGATAAAACTCACCAGATACTCGAGAAAACAAATATACCTACCGTTAACGTTGTCGGTTCCCCttt < 5:267222/140‑1 (MQ=255)
agCTGAAATTCTGATGACGCTTCTTCAATGCAACCCGGCGGCGTTAGTTATTTTTGGTTCTCAGTTGGCTGATAAAACTCACCAGATACTCGAGAAAACAAATATACCTACCGTTAACGTTGTCGGTTCCCCTTTCAGTc < 3:729610/140‑1 (MQ=255)
gCTGAAATTCTGATGACGCTTCTTCAAGGCAACCCGGCGGCGGTAGTGATTTTTGGTTCTGAGTTTGCTGATAAAACTGACCAGCTTCTCGAGAAAACAAATATTCCTACCCGTTACGTTGTCGGTTCCCCTTTCAGtac > 8:148856/1‑138 (MQ=255)
cTGAAATTCTGATGCCGCTTCTTCAAGGCAACCCGGCGGCGGTTTTTATTTTTGGTTCTGAGTTGGCGGATAAAACGCCCCAGATACTCGAGTAAACCAATATTCCTAACGTTAACGGTGTCGGTTGCCCGTTCAgggcg > 6:534455/1‑136 (MQ=255)
tGAAATTCTGATGACGCTTCTTCAAGGGAACCCGGCGGAGTTAGTTATTTTTGGTTCTCAGTAGGCTTATAAAACTCACCAGATACTCGAGAAAACAAATATACCTACCGTTAACGTTGTCTGTTCCCCTTTAAGTCCgg < 2:647897/140‑1 (MQ=255)
tgatgaCGCTTCTTCAAGGCAACCCGGCGGCGTTAGTTATTTTTGGTTCTCAGTTGGCTGATAAAACTCACCAGATACTCGAGAAAACAAATATACCTACCGTTAACGTTGTCGGTTCCCCTTTCAGTCCGGCTCAAAtt < 2:392779/140‑1 (MQ=255)
ttcttcAAGGCAACCCGGCGGCGTTTTTTTTTTTTTGTTCTCAGTTGGCTGATAAAACTCCCCAGATACACGAGAAAACAAATATACCTAACCTTAACGTTGTCGGTTAGCCGTTAAGTACGGGACAAAATAACaaagaa > 8:443850/1‑135 (MQ=255)
ttcAAGGCAACCCGGCGGCGTTATTTATTTTTTGTTTTCAGTTTGCTGATAAAACTACACAGATAATAGAGAAAACAAATATACCTACCGTTTAAGTTTTATGGTCACCTTTAAGTCCGGCGAAAAATACAATAAAAACa > 2:574584/1‑140 (MQ=255)
cacggcggCGTTAGTTATTTTTGGTTGTCAGTTGGCGGATAAAACTCACCAGATACTCGAGAAAACAAATATACCAACCCTTAACGGTGTGGGTTCCCCGTTCAGTCCGGCGCAAATTTCCCTAGAAACAGCAttttttt > 8:196913/3‑139 (MQ=255)
ccGGCGGCGTTAGTTATTTTTGGTTCTCAGGTGGCTGATAAAACTCACCAGATACTCGAGAAAACAAATATACCTACCGTTAACGTTGTCGGTTCCCCTTTCAGTCCGGCTCAAATTACCATCGAAACAGCATTTTTTGa < 8:678576/140‑1 (MQ=255)
gctgcgTTAGTTATTTTTGGTTCTCAGTTGGCTGATAAAACTCACCAGATACTCGAGAAAACAAATATACCTACCGTTAACGTTGTCGGTTCCCCTTTCAGTCCGGCTCAAATTACCATCGAAACAGCATTTTTTGAAGc < 4:959306/137‑1 (MQ=255)
gcggcgTTAGTTATTTTTTGTTCTCAGTTGGCTGATAAATCTCACCAGATACTCGAGAAAACAAATATACCTACCGTTAACGTTGTGGGTTCCCCTTTCAGTCCGGCTCAAATTACCATCGAAACAGCATTTTTTGAAGc < 5:734898/140‑1 (MQ=255)
gcggcgTTAGTTATTTTTGGTTCTCAGTTGGCTGATAAAACTCACCAGATACTCGAGAAACCAAATATACCTACCGTTAACGTTGTCGGTTCCCCTTTCAGTCCGGCTCAAATTACCATCGAAACAGCATTTTTTGAAGc < 5:560402/140‑1 (MQ=255)
gcggcgTTAGTTATTTTTGGTTCTCAGTTGGCTGATAAAACTCACCAGATACTCGAGAAAACAAATATACCTACCGTTAACGTTGTCGGTTCCCCTTTCAGTCTGGCTCAAATTACCATCGAAACAGCATTTTTTGAAGc < 4:699725/140‑1 (MQ=255)
gcggcgTTAGTTATTTTTGGTTCTCAGTTGGCTGATAAAACTCACCAGATACTCGAGAAAACAAATATACCTACCGTTAACGTTGTCGGTTCCCCTTTCAGTCCGGCTCAAATTACCATCGAAACAGCATTTTTTGAAGc < 4:221471/140‑1 (MQ=255)
gcggcgTTAGTTATTTTTGGTTCTCAGTTGGCTGATAAAACTCACCAGATACTCGAGAAAACAAATATACCTACCGTTAACGTTGTCGGTTCCCCTTTCAGTCCGGCTCAAATTACCATCGAAACAGCATTTTTTGAAGc < 7:444194/140‑1 (MQ=255)
gcggcgTTAGTTATTTTTGGTTCTCAGTTGGCTGATAAAACTCACCAGATACTCGAGAAAACAAATATACCTACCGTTAACGTTGTCGGTTCCCCTTTCAGTCCGGCTCAAATTACCATCGAAACAGCATTTTTTGAAGc < 6:886439/140‑1 (MQ=255)
gcggcgTTAGTTATTTTTGGTTCTCAGTTGGCTGATAAAACTCACCAGATACTCGAGAAAACAAATATACCTACCGTTAACGTTGTCGGTTCCCCTTTCAGTCCGGCTCAAATTACCATCGAAACAGCATTTTTTGAAGc < 5:472547/140‑1 (MQ=255)
gcggcgTTAGTTATTTTTGGTTCTCAGTTGGCTGATAAAACTCACCAGATACTCGAGAAAACAAATATACCTACCGTTAACGTTGTCGGTTCCCCTTTCAGTCCGGCTCAAATTACCATCGAAACAGCATTTTTTGAAGc < 2:964087/140‑1 (MQ=255)
gcggcgTTAGTTATTTTTGGTTCTCAGTTGGCTGATAAAACTCACCAGATACTCGAGAAAACAAATATACCTACCGTTAACGGTGTCGGTTCCCCTTTCAGTCCGGCTCAAATTACCATCGAAACAGCATTTTTTGAAGc < 2:109497/140‑1 (MQ=255)
gcggcgTTAGTTATTTTTGGTTCTCAGTTGGCTGATAAAACTCACCAGATACTCGAGAAAACAAATATACCTACCGTTAACGGTGGCGGTTCCCCTTTCAGTCCGGCTCAAATTACCATCGAAACAGCATTTTTTGAAGc < 3:916460/140‑1 (MQ=255)
gcggcgTTAGTTATTTTTGGTTCTCAGTTGGATGATAAAACTCACCAGATACTCGAGAAAACAAATATACCTACCGTTAACGTTGTCGGTTCCCCTTTCAGTCCGGCTCAAATTACCATCGAAACAGCATTTTTTGAAga < 1:96628/140‑2 (MQ=255)
gcggcgGTAGTTATTTTTGGTTCTCAGTTGGCTGATAAAACTCACCAGATACTCGAGAAAACAAATATACCTACCGTTAACGTTGTCGGTTCCCCTTTCAGTCCGGCTCAAATTACCATCGAAACAGCATTTTTTGAAGc < 8:303586/140‑1 (MQ=255)
gcggcgGTAGTTATTTTTGGTTCTCAGTTGGCTGATAAAACTCACCAGATACTCGAGAAAACAAATATACCTACCGTTAACGTTGTCGGTTCCCCTTTCAGTCCGGCTCAAATTACCATCGAAACAGCATTTTTTGAAGc < 1:136/140‑1 (MQ=255)
ggcgTTAGTTATTTTTGGTTCTCAGTTGGCTGATAAAACTCTCCAGATACTCGAGAAAACAAATATACCTACCGTTAACGTTGTCGGTTCCCATTTCAGTCCGGCTCAAATTACCATCGAAACAGCATTTTTTGAAGCAt < 1:261903/140‑1 (MQ=255)
ggcgTTAGTTATTTTTGGTTCTCAGTTGGCTGATAAAACTCACCAGATACTCGAGAAAACAAATATACCTACCGTTAACGTTGTCGGTTCCCCTTTCAGTCCGGCTCAAATTACCATCGAAACAGCATTTTTTGAAGCAt < 1:372347/140‑1 (MQ=255)
ggcgTTAGTTATTTTTGGTTCTCAGTTGGCTGATAAAACTCACCAGATACTCGAGAAAACAAATATACCTACCGTTAACGTTGTCGGTTCCCCTTTCAGTCCGGCTCAAATTACCATCGAAACAGCATTTTTTGAAGCAt < 5:731136/140‑1 (MQ=255)
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CCAGCTCCCGCTTTATGCAGTCGTTGCAGCAGGTGCTTAATAAAAATGAATTCCAGCTACTGCTTGGGTGTCATGAGTATAATCAGCTCAAAGAAGCTGAAATTCTGATGACGCTTCTTCAAGGCAACCCGGCGGCGTTAGTTATTTTTGGTTCTCAGTTGGCTGATAAAACTCACCAGATACTCGAGAAAACAAATATACCTACCGTTAACGTTGTCGGTTCCCCTTTCAGTCCGGCTCAAATTACCATCGAAACAGCATTTTTTGAAGCAT > NZ_CP022686/3797344‑3797616
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| Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
N/A
