Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A6 F35 I0 R1
|
157 |
6985.9 |
8006972 |
98.3% |
7870853 |
134.9 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
freq |
annotation |
gene |
description |
| RA |
NZ_CP022686 |
1,674,244 |
T→G |
18.4% |
T182P (ACC→CCC) |
ygfB ← |
UPF0149 family protein YgfB |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NZ_CP022686 | 1,674,244 | 0 | T | G | 18.4%
| 186.6
/ 12.0
| 144 | T182P (ACC→CCC) | ygfB | UPF0149 family protein YgfB |
| Reads supporting (aligned to +/- strand): ref base T (34/78); new base G (20/10); total (55/89) |
| Fisher's exact test for biased strand distribution p-value = 5.35e-04 |
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 |
Only 100 of 150 total aligned reads displayed.
CGCGGCGCTGCCGGGTTGCATTTGCTCTACCAGGGCCTGACGGCGACGCTGAAACTCTTGCCGGGATATATCACTCATAACACTCTCCTTACATTTTTTGTTTTTAGTGTAGAGTCGGTTTTTGTACTTCTGGCGCGGTCGGTTGCGGATGAGTAAAGGTGTC‑GTGGCATAACAGCGCGGCAACACGGACGTACTCGATGATCTCTTCAAGCGACATTTCAAGCTCTTCCTGATCTTCGTCTTCGTCGTAACCCAACTGCGCGATGTTACGCAGATC > NZ_CP022686/1674106‑1674382
|
cgcgGCGCTGCCGGGTTGCATTTGCTCTACCAGGGCCTGACGGCGACGCTGAAACTCTTGCCGGGATATATCACTCATAACACTCTCCTTACATTTTTTGTTTTTAGTGTAGAGTCGGGTTTTTTAATTATGGCGcggtg > 8:876648/1‑139 (MQ=255)
cggcgCTGCCGGGTTGCATTTGCTCTACCAGGGCCTGACGGCGACGCTGAAACTCTTGCCGGGATATATCACTCATAACACTCTCCTTACATTTTTTGTTTTTAGTGTAGAGTCGGTTTTTGTACTTCTGGCGcggtg > 4:733028/1‑137 (MQ=255)
tGCCGGGTTGCATTTGCTCTACCAGGGCCTGACGGCGACGCTGAAACTCTTGCCGGGATATATCACTCATAACACTCTCCTTACATTTTTTGTTTTTAGTGTAGAGTCGGTTTTTGTACTTCTGGCGCGGTCGGTTGc < 5:406573/138‑1 (MQ=255)
tGCCGGGTTGCATTTGCTCTACCAGGGCCTGACGGCGACGCTGAAACTCTTGCCGGGATATATCACTCATAACACTCTCCTTACATTTTTTGTTTTTAGTGTAGAGTCGGTTTTTGTACTTCTGGCGCGGTCGGTTGCgg < 7:73954/140‑1 (MQ=255)
tGCCGGGTTGCATTTGCTCTACCAGGGCCTGACGGCGACGCTGAAACTCTTGCCGGGATATATCACTCATAACACTCTCCTTACATTTTTTGTTTTTAGTGTAGAGTCGGTTTTTGTACTTCTGGCGCGGTCGGTTGCgg < 7:129773/140‑1 (MQ=255)
ggCCGGGTTGCATTTGCTCTACCAGGGCCTGACGGCGACGCTGAAACTCTTGCCGGGATATATCACTCATAACACTCTCCTTACATTTTTTGTTTTTAGTGTAGAGTCGGTTTTTGTACTTCTGGCGCGGTCGGTTGc < 5:209603/137‑1 (MQ=255)
ccGGGTTGCATTTGCTCTACCAGGGCCTGACGGCGAAGCTGAAACTCTTGCCGGGATATATCACTCATAACACTCTCCTTACATTTTTTGTTTTTAGTGTAGAGTCTGTTTTTGTACTTCTGGCGCGGTCGGTTGCGGAt < 7:261684/140‑1 (MQ=255)
gCATTTGCTCTACCAGGGCCTGACGGCGCCGCTGAAACTCTTGCCGGGATATATCACTCATAACACTCTCCTTACATTTTTTGTTTTTAGTGTAGAGTCGGGTTTTGTACATCTGGCGCGGTCGGTTGCGGATGAGtt > 2:859257/1‑137 (MQ=255)
cATTTGCTCTTCCAGGGCGTGACGGAGACGCTGAAACTGTTGCCGGGATATATCACTCATAACACTCTCCTTACATTTTTTGTTTTTAGTGTAGAGTCTGTTTTTGTACTTCTGGCGCGGTCGGTTGCGGATGAGTaa < 4:510601/138‑1 (MQ=255)
cATTTGCTCTACCAGGGCCTGACGGCGAAGCTGAAACTCTTGCCGGGATATATCACTCATAACACTCTCCTTACATTTTTTGTTTTTAGTGTAGAGGCGGGTTTTGTACTTCTGGCGCGGTCGGTAGCGGATGAGTaa < 5:87168/138‑1 (MQ=255)
ttctctACCAGGTGCTGACGGCGACGCGGAAACTCTTGCAGGGATATATCACTCATTACACTCTCCTTTCATTTTTTGTTTTTAGTGTATATTCGGTATTTGTACTTCTGGCGCTGTCGGATGCGGATGAGTAAAGgt < 2:965280/136‑1 (MQ=255)
tGCTCTACCAGGGCCTGACGGCGACGCTGAAACTCTTGCCGGGATATATCACTCATAACACTCTCCTTACATTTTTTGTTTTTAGTGTAGAGTCGGTTTTTGTACTTCTGGCGCGGTCGGTTGCGGATGAGTAAAGgtgt < 8:682743/140‑1 (MQ=255)
tGCTCTACCAGGGCCTGACGGCGACGCTGAAACTCTTGCCGGGATATATCACTCATAACACTCTCCTTACATTTTTTGTTTTTAGTGTAGAGTCGGTTTTTGTACTTCTGGCGCGGTCGGTTGCGGATGAGTAAAGgtgt < 8:368300/140‑1 (MQ=255)
tGCTCTACCAGGGCCTGACGGCGACGCTGAAACTCTTGCCGGGATATATCACTCATAACACTCTCCTTACATTTTTTGTTTTTAGTGTAGAGTCGGTTTTTGTACTTCTGGCGCGGTCGGTTGCGGATGAGTAAAGgt < 2:208261/138‑1 (MQ=255)
tGCTCTACCAGGGCCTGACGGCGACGCTGAAACTCTTGCCGGGATATATCACTCATAACACTCTCCTTACATTTTTTGTTTTTAGTGTAGAGTCGGTTTTTGTACTTCTGGCGCGGTCGGTTGCGGATGAGTAAAGgt < 5:473533/138‑1 (MQ=255)
tGCTCTACCAGGGCCTGACGGCGACGCTGAAACTCTTGCCGGGATATATCACTCATAACACTCTCCTTACATTTTTTGTTTTTAGTGTAGAGTCGGTTTTTGTACTTCTGGCGCGGTCGGTTGCGGATGAGTAAAGgt < 1:396059/138‑1 (MQ=255)
tGCTCTACCAGGGCCTGACGGCGACGCTGAAACTCTTGCCGGGATATATCACTCATAACACTCTCCTTACATTTTTTGTTTTTAGTGTAGAGTCGGTTTTTGTACTTCTGGCGCGGTCGGTTGCGGATGAGTAAAGgt < 2:84925/138‑1 (MQ=255)
tGCTCTACCAGGGCCTGACGGCGACGCTGAAACTCTTGCCGGGATATATAACTCATATCACTCTCCTTACATTTTTTGTTTTTAGTGTAGAGGCTGTTTTTGTACTTCTGGCGCGGTCGGGGGCGGATGAGTAAAGgtgt < 8:33132/140‑1 (MQ=255)
tGCTCTACCAGGGCCTGACGGCGACGCTGAAACTCTTGCCGGGATATAGCACTCATAACACTCTCCTTACATTTTTTGTTTTTAGTGTAGAGTCGGTTTTTGTACTTCTGGCGCGGTCGGTTGCGGATGAGTAAAGgt < 1:286517/138‑1 (MQ=255)
ctctACCAGGGCCTGACGGCGACGCTGAAACTCTTGCCGGGATATATCACTCATAACACTCTCCTTACATTTTTTGTTTTTAGTGTAGAGTCGGTTTTTGTACTTCTGGCGCGGTCGGTTGCGGATGAGTAAAGgtgt < 1:1004968/138‑1 (MQ=255)
ctctACCAGGGCCTGACGGCGACGCTGAAACTCTTGCCGGGATATATCACTCATAACACTCTCCTTACATTTTTTGTTTTTAGTGTAGAGTCGGTTTTTGTACTTCTGGCGCGGTCGGTTGCGGATGAGTAAAGgtgt < 3:237236/138‑1 (MQ=255)
ctctACCAGGGCCTGACGGCGACGCTGAAACTCTTGCCGGGATATATCACTCATAACACTCTCCTTACATTTTTTGTTTTTAGTGTAGAGTCGGTTTTTGTACTTCAGGCGCGGTCGGTTGCGGATGAGTAAAGgtgt < 6:188323/138‑1 (MQ=255)
ctctACCAGGGCCTGACGGAGACGATGAAAATCTTGCATGGATATATCACTCATAACACTCTCATTACATTTTTTGTTTTTAGTTTAGAGTCGGTTTTTGTACTTCTGGCGCGGTCGGTTGCGGATGATTAAAGgtgt < 1:145735/138‑1 (MQ=255)
tACCAGGGCCTGACGGCGACGCTGAAACTCTTGCCGGGATATATCACTCATAACACTCTCCTTACATTTTTTGTTTTTAGTGTAGAGTCGGTTTTTGTACTTCTGGCGCGGTCGGTTGCGGATGAGTAAAGGTGTC‑Gt < 2:307797/138‑1 (MQ=255)
aCCAGGGCCTGACGGCGACGCTGAAACTCTTGCCGGGATATATCACTCATAACACTCTCCTTACATTTTTTGTTTTTAGTGTAGAGTCGGTTTATGTACATATGGCGCGGTAGGTTTACGAGTAGTAAAGGTGTC‑GTggg > 7:448795/1‑139 (MQ=255)
cAGGGCCTGACGGCGACGCTGAAACTCTTGCCGGGATATATCACTCATAACACTCTCCTTACATTTTTTGTTTTTAGTGTAGAGTCGGTTTTTGTACTTCTGGCGCGGTCGGTTGCGGATGAGTAAAGGTGTC‑GTGGc > 4:367892/1‑138 (MQ=255)
ccTGACGGCGACGCTGAAACTCTTGCCGGGATATATCACTCATAACACTCTCCTTACATTTTTTGTTTTTAGTGTAGAGTCGGTTTTTGTACTTCTGGCGCGGTCGGTTGCGGATGAGTAAAGGTGTC‑GTGGCATAAc < 5:651398/138‑1 (MQ=255)
ccTGACGGCGACGCTGAAACTCTTGCCGGGATATATCACTCATAACACTCTCCTTACATTTTTTATTTTTAGTGTAGAGTCGGGTTTTGTTCTTATGGCGCGGTCGGGTGCGGATGCGGAAAGGTGTA‑GTgggctgac > 2:620872/1‑132 (MQ=255)
cTGACGGCGACGCTGAAACTCTTGCCGGGATATATCACTCATAACACTCTCCTTACATTTTTTGTTTTTAGTGTAGAGTCGGTTTTTTTACTTCTGGCGCGGTCGGTTGCGGATGAGTAAAGGTGTA‑GTGGCATAACa > 2:715729/1‑138 (MQ=255)
cTGACGGCGACGCTGAAACTCTTGCCGGGATATATCACTCATAACACTCTCCTTACATTTTTTGTTTTTAGTGTAGAGTCGGGTTTTGGAATTCTGGCGCGGTCGGGTGCGGATGAGGTAAGGTTGC‑GTGGCATAACa > 2:679955/1‑138 (MQ=255)
tGACGGCGACGCTGAAACTCTTGCAGGGATATATCACTCATAACACTCTCCTAACATTTTTTGTTTTTAGTTTAGACGCGGTTTTTGTACTGATGGCGCGGGCGGTTGCGGATGAGTAAAGGTGTC‑GTGGAATAACAg < 4:915604/138‑1 (MQ=255)
aCGGCGACGCTGAAACTCTTGCCGGGATATATCACTCATAACACTCTCCTTACATTTTTTGTTTTTAGTGTAGAGTCGGGTTTTGTTCTGGTGGCGCGGGCGGTTTGGGTTGTGTTAAGGGGTG‑GGGGCATAAAcgcgcg > 7:442935/1‑140 (MQ=255)
cGGCGACGCTGAAACTCTTGCAGGGATATATCACACCTAACACTCTCCATACATTTTTTGTTTTTAGTGTAGAGTCGGTTTTTGTAATTCTGGCGCGGTCGGTTGCGGATGAGTACAGGTGTC‑GTGGCATAACAgcgc < 4:655756/138‑1 (MQ=255)
cGGCGACGCTGAAACGCTTGCCGGGAGATATCACTCATAACACTCTCCTTACATTTTTTGTTTTTAGGGTAGAGTCGGTTTTTGTACTTCTGGCGCGGTCGGTTGCGGATGAGTAAAGGTGTC‑GTGGCATAACAGCGCgg < 8:565498/140‑1 (MQ=255)
ggCGACGCTGAAACTCTTGCCGGGATATATCACTCATAACACTCTCCTTACATTTTTTGTTTTTAGTGTAGAGTCGGTTTTTTTACTTCTGGCGCGGTCGGTTGGGGATGAGTTAATGTGTC‑GTGGCATAACAGcgcg > 4:374162/1‑138 (MQ=255)
ggCGAAGCTGAAACACTTGCCGGGATAAATCACTCATAACACTCTCCTTACATATTTTTGATTTAGTGTAGAGACGGCGTGTGTAATGATGGGCGGGGAGGATTCAGATGAGTAAAGGTGTA‑CTGGCCAAACAGagcg > 4:711570/1‑138 (MQ=255)
cGACGCTGAAACTCTTGCCGGGATATATCACTCATAACACTCTCCTTACATTTTTTGTTTTTAGTGTAGAGTCGGTTTTTTTACTTCTGGCGCGGTCGGTTGCGGTTGTGTAAATGTGTG‑GTGGCATAACAGCGCGGCaa > 7:786128/1‑140 (MQ=255)
cGACGCTGAAACTCTTGCCGGGATATATCACTCATAACACTCTCCTTACATTTTTTGTTTTTAGTGTAGAGTCGGTTTTTGTACTTCTGGCGCGGTCGGTTGCGGATGAGTAAAGGTGTC‑GTGGCATAACAGCGCGGCaa < 7:72075/140‑1 (MQ=255)
cGACGCTGAAACTCTTGCCGGGATATATCACTCATAACACTCTCCTTACATTTTTTGTTTTTAGTGTAGAGTCGGGTTTTGGACTTCTGGCGCGGTCGGTTGCGGATGAGTAAAGGTGGC‑GTGGCATAACAGCGCGGCaa < 7:688703/140‑1 (MQ=255)
aCGCTGAAACTCTTGCCGGGATATATCACTCATAACACTCTCCTTACATTTTTTGTTTTTAGTGTAGAGTCGGTTTTTGTACTTCTGGCGCGGGCGGTTGCGGATGAGTAAAGGTGTC‑GTGGCATAACAGCGCGGCaa < 3:656479/138‑1 (MQ=255)
gCTGAAACTCTTGCCGGGATATATCACTCATAACACTCTCCTTACATTTTTTGTTTTTAGTGTAGAGTCGGGTTTTTTACATCTTGCGCGGGCGGGTGGGGATGAGTAAAGGTGTC‑GTGGCAGCACAGCGCGGCAacc > 3:795622/1‑137 (MQ=255)
cTGAAACTCTTGCCGGGATATATCACTCATAACACTCTCCTTACATTTTTTGTTTTTAGTGTAGAGTCGGTTTTTGTACTTCTGGCGCGGTCGGTTGCGGATGAGTAAAGGTGTC‑GTGGCATAACAGCGCGGCAacac < 6:506882/138‑1 (MQ=255)
aCTCTTGCCGGGATATATCACTCATAACACTCTCCTTACATTTTTTGTTTTTAGTGTAGAGTCGGTTTTTGTACTTCTGGCGCGGTCGGTTGc > 4:8985/1‑93 (MQ=255)
ctTGCCGGGATATATCACTCATAACACTCTCCTTACATTTTTTGTTTTTAGTGTAGAGTCGGTTTTTGTACTTCTGGCGCGGTCGGTTGCGGATGAGTAAAGgtgt < 7:885849/106‑1 (MQ=255)
ttGCCGGGATATATCAATCATAACACTCTCCTTACTTTTTTTGTTTTTAGTGTATAGTAGGTTTTTTTAGTTATGGCGCGGTAGGTTGCGGGTTAGTAAATGTTTA‑GTGGCATAACAGCGCGGCCAAACGGACATaaacg > 8:701352/1‑136 (MQ=255)
gCCGGGATATATCACTCATAACACTCTCCTTACATTTTTTGTTTTTAGTGTAGAGTCGGTTTTTGTTATTCTTGCGCGGTCGGGTGCGGATTAGTTAAGGTGTC‑GTGGCCTAACAGCGCGGCACAACGGCCGGAATCg > 2:964323/1‑138 (MQ=255)
cGGGATATATCACTCATAACACTCTCCTTACATTTTTTGTTTTTAGTGTAGAGTCGGTTTTTTTTATTATGTGGGGGTGGGTTGAGGATGAGTTAATGTTTG‑GTGGCATAACAGCGCGGCAAACCGGACGTACTAgaa > 4:359127/1‑137 (MQ=255)
gggATATATCACTCATAACACTCTCCTTACATTTTTTGTTTTTAGTGTCGAGTCGGGTTTTGTACTTCTGGCGCGGGCGGTTGCGGATGAGTAAAGGTGTC‑GTGGCATAACAGCGCGGCAACACGGACGTACTCgatg < 4:694004/138‑1 (MQ=255)
cACTCATAACACTCTCCTTACATTTTTTGTTTTTAGTGTAGAGTCGGTGTTTGTTAATGTGGCGCGGGCGGGTGGGGTTGGGGAAAGGTGTG‑GTGGCATAACCGCGCGGCCCCACGGCCGGTCGCGAAGATATCTTCa > 1:697380/1‑138 (MQ=255)
cTCATAACACTCTCCTTACATTTTTTGTTTTTAGTGTAGAGTCGGTTTTTGTACTTCTGGCGCGGGCGGTTGCGGATGAGTAAAGGTGGC‑GTGGCATAACAGCGCGGCAACACGGACGTACTCGATGATCTCTTCAAg < 4:342754/138‑1 (MQ=255)
tCATAACACTCTCCTTACATTTTTTGTTTTTAGTGTAGAGTCGGTTTTTGTACTTCTGGCGCGGTCGGTTGCGGATGAGTAAAGGTGTC‑GTGGCATAACAGCGCGGCAACACGGACGTACTCGATGATCTCTTCAAGc < 6:578239/138‑1 (MQ=255)
tCATAACACTCTCCTTACATTTTTTGTTTTTAGTGTAGAGTCGGTTTTTGTACTTCTGGCGCGGTCGGTTGCGGATGAGTAAAGGTGTC‑GTGGCATAACAGCGCGGCAACACGGACGTACTCGATGATCTCTTCAAGCGa < 7:524795/140‑1 (MQ=255)
tCATAACACTCTCCTTACATTTTTTGTATTTAGTGTAGAGTCGGTTTTTGTACTTCTTGCGCGGGCGGTTGCGGATGAGTAAAGGTGTC‑GTGGCATAACAGCGCGGCAACACGGACGTACTCGATGATCTCTTCAAGCGa < 8:72359/140‑1 (MQ=255)
aTAACACTCTCCTTACATTTTTTGTTTTTAGTGTAGAGTCGGTTTTTGTTCTTCTGGCGCGGTCGGTTGCGGGTGATTTAAGGTTTCTGTGG‑ATAAAAGAGCGGCAACACCGCCGTACTAGATGATCTCTTCAACCgccc > 8:630274/1‑137 (MQ=255)
tAACACTCTCCTTACATTTTTTGTTTTTAGTGTAGAGTCGGGTTTTGTTCTTCTGGCGCGGGCGGGTGCGGATGAGTAAAGGTGTC‑GTGGCCAAACCCCGCGGCAAACCGGCCGGACTAGATGATCTCTTCAAGCGAc > 6:288761/1‑138 (MQ=255)
aaCACTCTCCTTACATTTTTTGTTTTTAGTGTAGAGTCGGTTTTTGTACTTATGGCGCGGTAGGTTGCGGATGAGTTAAGGTGTC‑GTGGCATAACAGCGCGGCAACACGGGCGTACTCGATGATGTGTTCAAGCGACa > 4:735247/1‑138 (MQ=255)
acacTCTCCTTACATTTTTTGTTTTTAGTGTAGAGTCGGTTTTTGTACTTCTGGCGCGGACGGTTGCGGATGAGTAAAGGTGTC‑GTGGCATAACAGCGCGGCAACACGGACGTACTCGATGATCTCTTCAAGCGACAt < 1:984244/138‑1 (MQ=255)
cacTCTCCTTACATTTTTTGTTTTTAGTGTAGAGTCGGTTTTTGTACTTATTGGGCGGTGGGTTTCGGATGTGTAAAGGTGTA‑GTGGCTTTACAGCGCGGCCAAACGGACGTTCTCGATGATGTCTTAAATCGACAtt > 6:728359/1‑138 (MQ=255)
cacTCTCCTTACATTTTTTGTTTTTAGTGTAGAGTCGGTTTTTGTAATTATGGGGCGGTGGGTTGCGGATTAGTAAATGTGTA‑GTGGCATAACAGCGCGGCAACACCGACGTACTCGCTGATCTATTCAAGAGACaat > 6:356314/1‑136 (MQ=255)
tctcCTTACATTTTTTGTTTTTAGTGTAGAGTCGGGTTTTGTACTTCTGGCCCGGTCGGTAGCGGAAGAGGAAAGGATTC‑GTGCCGTAACAGCGCGGCCACAAGGAAGGCAAAGATGATAACTTCAAGCGACAGTTCaac > 8:488326/1‑139 (MQ=255)
ctcCTTACATTTTTTGTTTTTAGTGTAGAGTCGGTTTTTGTACTTCTGGCGCGGTCGGTTGCGGATGAGTACAGGTGGC‑GTGGCTTATCAGCGCGGCAACACGGACGTACTCGATGATCTCTTCAAGCGACATTTCaa < 2:196287/138‑1 (MQ=255)
ctcCTTACATTTTTTGTTTTTAGTGTAGAGTCGGTTTTTGTACTTCTGGCGCGGTCGGTTGCGGATGAGTAAAGGTGTC‑GTGGCATAACAGCGCGGCAACACGGACGTACTCGATGATCTCTTCAAGCGACATTTCaa < 4:55202/138‑1 (MQ=255)
ctcCTTACATTTTTTGTTTTTAGTGTAGAGTCGGTTTTTGTACTTCTGGCGCGGGCGGTTGCGGATGAGTAAAGGGGTC‑GTGGCATAACAGCGCGGCAACACGGACGTACTCGATGATCTCTTCAAGCGACATTTCaa < 3:214259/138‑1 (MQ=255)
ctcCTTACATTTTTTGTTTTTAGTGTAGAGTCGGGTTTTGTAGTTATGGGGCGGTCGGTTGCGGATGAGTAAAGGTGTA‑GTGGCATAACAGCGCGGCAACACCGACGTACTCGATGTACTCTTAAAGCCACCTTTCAAGc > 8:670246/1‑140 (MQ=255)
ccTTACATTTTTTGTTTTTAGTGTAGAGTCGGTTTTTGTTCATAAGGCGCGGTAGGTTGCTGATGTCTAAATGTGTC‑GTTGCATAACATCGCCGCAAAACGGACGTAAAAGAAGATCACTTCAAACGACAATTAAAGc > 6:663521/1‑138 (MQ=255)
ccTTACATTTTTTGTTTTTAGTGTAGAGTCGGTTTTTGTAATTGATGCGGTGTCGGTTGCGGATTAGTAAAGGTGTC‑GTGGCATAACACCGCGGCCACACGGACGTACTCGATGGTCACTTAAAGCGACATTTAAAGc > 5:453268/1‑138 (MQ=255)
ccTTACATTTTTTGTTTTTAGTGTAGAGTCGGGTTTTTTAATTATGGCGCGGGCGGTTGAGGTTGAGTAAAAGTGTC‑GTTGGATAAAACCGCCGCAACACCGCCCGAATCCATTATCTCATAAAGCCACAATTAAAGc > 3:960063/1‑138 (MQ=255)
ccTTACATTTTTTGTTTTTAGTGTAGAGTCGGGTTTTGTTCTTATGGCGCGGTCGGGTGCGGATGAGGAAATGGGTC‑GTGGGATAACAGCGCGGGCACACGGCCGTTCTCGATGATGTCTTCAAGCGACATTTCAAGc > 6:791561/1‑138 (MQ=255)
ccTTACATTTTTTGTTTTTAGTGTAGAGTCGGGTTTTGTAGATATGGCGCGGGCGGTTGCGGAGGAGTAAAGGTGTA‑GGGGGATAACACCGCGGCCACCCCGGCGTGAACGCTGATCTCGTCAAGCGCCAATTaaatg > 6:964273/1‑136 (MQ=255)
ccTTACATTTTTTGTTTTTAGTGTAGAGTCGGGTTTTGTACTTCTGGCGCGGGCGGTTGAGGATGAGTTAATTTGTC‑GTGGCATAACAGCGCGGCAACACGGACGTAATCGATGATATCTTAAAGCGACATTTAAAga > 2:423850/1‑137 (MQ=255)
ccTTACATATTTTGTTTTTAGTGTAGAGTCGGGTGTTGTACTTCTGGCGCGGGCGGGTGGGGATGACTAAAGGTGTA‑GGGGCATAAACGCGCGGCAACCCCGACGGAGTCGAGGAGCACATCAAGCGACCTATCAAGc > 6:650332/1‑138 (MQ=255)
aTTTTTTGTTTTTAGTGTAGAGTCGGTTTTTGTAATTATGGCGCGGGCGGTTGAGGATGAGGAAAGGTGTC‑GTGGCATAAAAGCGCGGCAACAAGGAGGTGCACGGTGATGTAGTGAAGCGACATTTAAAGCTCTTcc > 6:480298/1‑138 (MQ=255)
aTTTTTTGTTTTTAGTGTAGAGTCGGTTGTTGTACTTATTGAGCAGTATGGTTCGTAAGAGTAAAGGATTC‑AGGGCATAACAACGAGGCGAAAAAGAAGGAATGCAGGAACACTTCAAGCGACAATTCAAGcactgactg > 8:880287/1‑135 (MQ=255)
ttGTTTTTAGTGTAGAGTCGGTTTTTGTACTTCTGGCGCGGTCGGTTGCGGATGAGTAAAGGTGTC‑GTGGCATAACAGCGCGGCAACACGGACGTACTCGATGATCTCTTCAAGCGACATTTCAAGCTCTTCCTGAtc < 5:356314/138‑1 (MQ=255)
gtgtAGAGTCGGTTTTTGTACTTCTGGCGCGGTCGGTTGCGGATGAGTAAAGGTGTC‑GTGGCATAACAGCGCGGCAACACGGACGTACTCGATGATCTCTTCAAGCGACATTTCAAGCTCTTCCTGAtcttcgtcttc < 3:811914/138‑1 (MQ=255)
gtAGAGTCGGTTTTTGTACTTCTGGCGCGGTCGGTTGCGGATGAGTAAAGGTGTC‑GTGGCATAACAGCGCGGCAACACGGACGTACTCGATGATCTCTTCAAGCGACATTTCAAGCTCTTCCTGATcttcgtcttcgt < 3:735247/138‑1 (MQ=255)
ggTTTTTGTACTTCTGGCGCGGTCGGTTGCGGATGAGTAAAGGTGTC‑GTGGCATAACAGCGCGGCAACACGGACGTACTCGATGATCTCTTCAAGCGACATTTCAAGCTCTTCCTGATCTTCGTCTTCGTCGTAAccc < 5:900191/138‑1 (MQ=255)
gttttTACTTCTGGCGCGGTCGGTTGCGGATTAGTTAAGGTGTG‑GTGGCCTAACAGCGCGGCCACACGGCCGTACTCGTTGATATCTTCAAGCGCCCATTCAAGCGCTTCCTGATATTAGTATTCGTCGTAACCCCAc > 2:1013050/2‑138 (MQ=255)
ttGTACTTCTGGCGCGGTCGGTTGCGGATGAGTAAAGGTGTC‑GTGGCATAACAGCGCGGCAACACGGACGTACTCGATGATCTCTTCAAGCGACATTTCAAGCTCTTCCTGATCTTCGTCTTCGTCGTAACCCAACTg < 2:328079/138‑1 (MQ=255)
ttGTACTTCTGGCGCGGTCGGTTGCGGATGAGTAAAGGTGTC‑GTGGCATAACAGCGCGGCAACACGGACGTACTCGATGATCTCTTCAAGCGACATTTCAAGCTCTTCCTGATCTTCGTCTTCGTCGTAACCCAACTg < 3:387115/138‑1 (MQ=255)
ttGTACTTCTGGCGCGGTCGGTTGCGGATGAGTAAAGGTGTC‑GTGGCATAACAGCGCGGCAACACGGACGTACTCGATGATCTCTTCAAGCGACATTTCAAGCTCTTCCTGATCTTCGTCTTCGTCGTAACCCAACTg < 4:31061/138‑1 (MQ=255)
ttGTACTTCTGGCGCGGTCGGTTGCGGATGAGTAAAGGTGTC‑GTGGCATAACAGCGCGGCAACACGGACGTACTCGATGATCTCTTCAAGCGACATTTCAAGCTCTTCCTGATCTTCGTCTTCGTCGTAACCCAACTg < 4:290866/138‑1 (MQ=255)
ttGTACTTCTGGCGCGGTCGGTTGCGGATGAGTAAAGGTGTC‑GTGGCATAACAGCGCGGCAACACGGACGTACTCGATGATCTCTTCAAGCGACATTTCAAGCTCTTCCTGATCTTCGTCTTCGTCGTAACCCAACTg < 3:673722/138‑1 (MQ=255)
ttGTACTTCTGGCGCGGTCGGTTGCGGATGAGTAAAGGGGTC‑GTGGCATAACAGCGCGGCAACACGGACGTACTCGATGATCTCTTCAAGCGACATTTCAAGCTCTTCCTGATCTTCGTCTTCGTCGTAACCCAACTg < 2:467002/138‑1 (MQ=255)
ttGTACTTCTGGCGCGGTCGGTAGCGGATGAGTAAAGGTGTC‑GTGGCATAACAGCGCGGCAACACGGACGTACTCGATGATCTCTTCAAGCGACATTTCAAGCTCTTCCTGATCTTCGTCTTCGTCGTAACCCAACTgcg < 8:756183/140‑1 (MQ=255)
ttGTACTTCTGGCGCGGTCGGGTGCGGATGAGTAAAGGTGTC‑GTGGCATAACAGCGCGGCAACACGGACGTACTCGATGATCTCTTCAAGCGACATTTCAAGCTCTTCCTGATCTTCGTCTTCGTCGTAACCCAACTg < 1:576720/138‑1 (MQ=255)
ttGTACTTCTGGCGAGGTCGGTTGCGGATGAGTCAAGGTGGC‑GTGGCATAACAGCGCGGCAACACGGACGTACTCGATGATCTCTTCAAGCGACATTTCAAGCTCTTCCTGATCTTCGTCTTCGTCGTAACCCAACTgct < 7:407889/140‑2 (MQ=255)
ttGTACTTCAGGCGCGGGCGGTTTCGGATGAGTATAGGTGTC‑GTGGCATAACAGCGCGGCAACACGGACGTACTCGATGATCTCTTCAAGCGACATTTCAAGCTCTTCCTGATCTTCGTCTTCGTCGTAACCCAACTgcg < 7:252511/140‑1 (MQ=255)
gTACTTCTGGCGCGGTCGGTTGCGGATGAGTAAAGGTGTC‑GTGGCATAACAGCGCGGCAACACGGACGTACTCGATGATCTCTTCAAGCGACATTTCAAGCTCTTCCTGATCTTCGTCTTCGTCGTAACCCAACTgcg < 3:898991/138‑1 (MQ=255)
gTACTTCTGGCGCGGTCGGTTGCGGATGAGTAAAGGTGTC‑GTGGCATAACAGCGCGGCAACACGGACGTACTCGATGATCTCTTCAAGCGACATTTCAAGCTCTTCCTGATCTTCGTCTTCGTCGTAACCCAACTgcg < 3:224346/138‑1 (MQ=255)
gTACTTCTGGCGCGGTCGGTGGCGGATGAGTAAAGGTGTC‑GTGGCATAACAGCGCGGCAACACGGACGTACTCGATGATCTCTTCAAGCGACATTTCAAGCTCTTCCTGATCTTCGTCTTCGTCGTAACCCAACTGcgcg < 8:779867/140‑1 (MQ=255)
cTTCTGGCGCGGTCGGGTGCGGATGAGTAAAGGTGTC‑GTGGCATAACAGCGCGGCAACACGGACGTACTCGATGATCTCTTCAAGCGACATTTCAAGCTCTTCCTGATCTTCGTCTTCGTCGTAACCCAACTGCGCGa < 4:659709/138‑1 (MQ=255)
tGGCGCGGTCGGTTGCGGATGAGTAAAGGTGTC‑GTGGCATAACAGCGCGGCAACACGGACGTACTCGATGATCTCTTCAAGCGACATTTCAAGCTCTTCCTGATCTTCGTCTTCGTCGTAACCCAACTGCGCGATGtt > 3:174967/1‑138 (MQ=255)
tGGCGCGGTCGGTTGCGGATGAGTAAAGGTGTC‑GTGGCATAACAGCGCGGCAACACGGACGTACTCGATGATCTCTTCAAGCGACATTTCAAGCTCTTCCTGATCTTCGTCTTCGTCGTAACCCAACTGCGCGATGtt > 2:591976/1‑138 (MQ=255)
tGGCGCGGTCGGTTGCGGATGAGTAAAGGTGTC‑GTGGCATAACAGCGCGGCAACACGGACGTACTCGATGATCTCTTCAAGCGACATTTCAAGCTCTTCCTGATCTTCGTCTTCGTCGTAACCCAACTGCGCGATGtt > 5:184895/1‑138 (MQ=255)
ggCGCGTTCGGTGTGTGATTAGTAAAGGTGTA‑GTGTCATAACAGAGAGGCAACACGGACTTAATCGATGATCTCTTGAAGCGAAATTTCAATCTCTTCCTGATCTTAGTCTTCGTCGTAACCCAACAGCGCGATGTTa < 5:594083/138‑1 (MQ=255)
gcgcGGGCGGTTGCGGATTAGTAAAGGTGTC‑GTGGCATAACAGCGCGGCAACACGGACGTACTCGATGATCTCTTCAAGCGACATTTCAAGATCTTCCTGATCTTCGTCTTCGTCGTAACCCAACTGCGCGATGTTACGc < 8:220406/140‑1 (MQ=255)
tggtcggtTGCGGAGGAGTAAAGGTGTC‑GTGGCATAACTGAGCGGCAAAACGGACGTACTCGATGATCTCTTCAAGAGACATTTCAAGCTCTTCCTGATCTTCGTCTTCGTCGTAACCCAAGTGCGCTATGTTACGCAGa < 8:544434/139‑1 (MQ=255)
cggtcggtTGCGGATGAGTAAAGGTGTC‑GTGGCATAACAGCGCGGCAACACGGACGTACTCGATGATCTCTTCAAGCGACATTTCAAGCTCTTCCTGATCTTCGTCTTCGTCGTAACCCAACTGCGCGATGTTACGCAGa < 8:167348/140‑1 (MQ=255)
gtcggtTGCGGATGAGTAAAGGTGTC‑GTGGCATAACAGCGCGGCCACACGGACGTACTCGATGATCTCTTCAAGCGACATTTCAAGCTCTTCCTGATCTTCGTCTTCGTCGTAACCCAACTGCGCGATGTTACGCAGAtc > 7:373928/1‑140 (MQ=255)
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CGCGGCGCTGCCGGGTTGCATTTGCTCTACCAGGGCCTGACGGCGACGCTGAAACTCTTGCCGGGATATATCACTCATAACACTCTCCTTACATTTTTTGTTTTTAGTGTAGAGTCGGTTTTTGTACTTCTGGCGCGGTCGGTTGCGGATGAGTAAAGGTGTC‑GTGGCATAACAGCGCGGCAACACGGACGTACTCGATGATCTCTTCAAGCGACATTTCAAGCTCTTCCTGATCTTCGTCTTCGTCGTAACCCAACTGCGCGATGTTACGCAGATC > NZ_CP022686/1674106‑1674382
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| Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
N/A
