Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A26 F12 I0 R1
|
131 |
9881.0 |
7547414 |
98.3% |
7419107 |
134.8 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
freq |
annotation |
gene |
description |
| RA |
NZ_CP022686 |
2,049,089 |
T→G |
16.1% |
N256T (AAC→ACC) |
deaD ← |
ATP‑dependent RNA helicase DeaD |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NZ_CP022686 | 2,049,089 | 0 | T | G | 16.1%
| 322.0
/ 25.9
| 182 | N256T (AAC→ACC) | deaD | ATP‑dependent RNA helicase DeaD |
| Reads supporting (aligned to +/- strand): ref base T (18/131); new base G (28/4); total (46/136) |
| Fisher's exact test for biased strand distribution p-value = 1.05e-16 |
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 |
Only 100 of 185 total aligned reads displayed.
CGCAATCAGGATGTCCAGACGACCATCTTTCAGGCGTTCCAGTGTCTGCTCACGCAGCGCCTGGTTCATGTCACCGTTCAGCGCGGCGCTGTTGTAGCCGTTACGCTCAAGAGCTTCTGCCACTTCCAGAGTCGCGTTTTTGGT‑ACGAACGAAGATAATCGCCGCATCAAAATCTTCCGCTTCCAGGAAACGTACCAGTGCTTCGTTTTTACGCATACCCCAGACAGTCCAGTAGCTCTGGCTGATGTCAGGACGGGTAGTCACGCTGGAC > NZ_CP022686/2048953‑2049223
|
cgCAATCAGGATGTCCAGACGACCATCTTTCAGGCGTTCCAGTGTCTGCTCACGCAGCGCCTGGTTCATGTCACCGTTCAGCGCGGCGCTGTTGTAGCCGTTACGCTCAAGAGCTTCTGCCACTTCCAGAGTCGCGtt > 7:386391/1‑138 (MQ=255)
cgCAATCAGGATGGCCAGACGACCATCTTTCAGGCGTTCCAGTGTCTGCTCACGCAGCGCCTGGTTCATGTCACCGTTCAGCGCGGCGCTGTTGTAGCCGTTACGCTCAAGAGCTTCTGCCACTTCCAGAGTCGCGtt < 8:533421/138‑1 (MQ=255)
tCAGGATGGACAGACGACCATCTTTCAGGCGTTCCAGTTTCTGCTCACGCAGCGCCTGGTTCATGTCACCGTTCAGCGCGGCGCTGTTGTAGCCGTTACGCTCAAGAGCTTCTGCCACTTCCAGAGTCGCGTTTTTGGT‑a < 4:103890/140‑1 (MQ=255)
tggccAGACGACCATCTTTCAGGCGTTCCAGTGTCTGCTCACGCAGCGCCTGGTTCATGTCACCGTTCAGCGCGGCGCTGTTGTAGCCGTTACGCTCAAGAGCTTCTGCCACTTCCAGAGTCGCGTTTTTGGT‑acgaa < 8:840437/135‑1 (MQ=255)
tGTCCAGACGACCATGTTTCAGGCGTTCCAGTGTCTGCTCACGCAGCGACTTGTTCATGTCAGCGTTCAGCGCGGCGCTGTTGTAGCCGTTACGCTCAAGAGCTTCTGCCACTTCCAGAGTCGCGTTTTTGGT‑acgaacg < 3:483028/140‑1 (MQ=255)
tGTCCAGACGACCATCTTTCAGGCGTTCCAGTGTCTGCTCACGCAGCGCCTGGTTCATGTCACCGTTCAGCGCGGCGCTGTTGTATCCGTTACGCTCAAGAGCTTCTGCCACATCCAGAGTCGCGTTTTTTGT‑aacaa > 5:599861/1‑134 (MQ=255)
tGTCCAGACGACCATCTTTCAGGCGTTCCAGTGTCTGCTCACGCAGCGCCTGGTTCATGTCACCGTTCAGCGCGGCGCTGTTGTAGCCGTTACGCTCAAGAGCTTCTGCCACTTCCAGAGTCGCGTTTTTGGT‑acgaa < 7:528970/138‑1 (MQ=255)
cAGACGACCATCTTTCAGGCGTTCCAGTGTCTGCTCTCGCCGCGCCTGGTTGATGTCATCGTTCCGCGCGGCGCTGTAGTCGCCGGTACGCGAAAGCGCTTGTGCCCATTACAGCGTCGCGGTGTTGGTGacgaaagg > 5:621505/1‑135 (MQ=255)
cAGACGACCATCTTTCAGGCGTTCCAGTGTCTGCTCACGCAGCGCCTGGTTCATGTCACCGTTCAGCGCGGCGCTGTTGTAGCCGTTACGCTCAAGAGCTTCTGCCACTTCCAGAGTCGCGTTTTTTGT‑tcgaaccca > 7:460064/1‑135 (MQ=255)
cAGACGACCATCTTTCAGGCGTTCCAGTGTCTGCTCACGCAGCGCCTGGTTCATGTCACCGTTCAGCGCGGCGCTGTTGTAGCCGTTACGCTCAAGAGCTTCTGCCACTTCCAGAGTCGCGGTTTTTGT‑Tgggacgaa > 1:9063/1‑138 (MQ=255)
cAGACGACCATCTTTCAGGCGTTCCAGTGTCTGCTCACGCAGCGCCTGGTTCATGTCACCGTTCAGCGCGGCGCTGTTGTAGCCGTTACGCTCAAGAGCTTCTGCCACTTCCAGAGTCGCGGTTTTTGT‑Aagaacgaa > 1:617503/1‑138 (MQ=255)
cgtccATCTTGCAGGCTTTCCAGTGTCTGCTCACGCAGCGCCTGGTGCATGTCACAGTTCAGCGCGGCGCTGTTGTAGCCGTTACGATCAAGAGCTTCTGCCACTTCCAGAGTCGCGTTTTTGGT‑ACGAACGAAGATAAt < 3:609283/137‑1 (MQ=255)
tCTTTCAGGCGTTCCAGTGTCTGCTCACGCAGCGCCTGGTTCATGTCACCGTTCAGCGCGGCGCTGTTGTAGCCGTTACGCTCAAGAGCTTCTGCCACTTCCAGAGTCGCGTGGTTTGT‑GCGCACGCATATAATcgcc > 7:120612/1‑138 (MQ=255)
ggCGTTCCAGTGTCTGCTCACGCAGCGCCTGGTTCATGTCACCGTTCAGCGCGGCGCTGTTGTAGCCGTTACGCTCAAGAGCTTCTGCCACTTCCAGAGTCGCGGTTTTTGT‑TAGGACGAATAAAATATCCGCATCaaaa > 3:457951/1‑140 (MQ=255)
cGTTCCAGTGTCTGCTCACGCAGCGCCTGGTTCATGTCACCGTTCAGCGCGGCGCTGTTGTAGCCGTTACGCTCAAGAGCTTCTGCCACGTCCAGAGTCGCGGGTTTTGT‑TCGAACGAAGATACTAGCCCCAaaaaaa > 2:286831/1‑138 (MQ=255)
ttCCAGTGTCTGCTCACGCAGCGCCTGGTTCATGTCACCGTTCAGCGCGGCGCTGTTGTAGCCGTTACGCTCAAGAGCTTCTGCCACTTCCAGAGTCGCGTTTTTGGT‑TCGAACGGAGATAATAGCCGCATGaaaaaaat > 4:18473/1‑136 (MQ=255)
tCCAGTGTCTGCTCACGCAGCGCCTGGTTCATGTCACCGTTCAGCGCGGCGCTGTTGTAGCCGTTACGCTCAAGAGCTTCTGCCACTTCCAGAGTCGCGTTTTTGGT‑ACGAACGAAGATAATCGCCGCATCAAAATCt < 1:719526/138‑1 (MQ=255)
ccAGTGTCTGCTCACGCAGCGCCTGGTTCATGTCACCGTTCAGCGCGGCGCTGTTGTAGCCGTTACGCTCAAGAGCTTCTGCCACTTCCAGAGTCGCGGTTTTTGT‑TAGACAGAAGATAAAAGCCGCATAAATAACtt > 8:237362/1‑138 (MQ=255)
ccAGTGTCTGCTCACGCAGCGCCTGGTTCATGTCACCGTTCAGCGCGGCGCTGTTGTAGCCGTTACGCTCAAGAGCTTCTGCCACTTCCAGAGTCGCGGTTTTGGT‑ACGAAAGAAAAAAATACCCGCATCACAATCtt > 8:26735/1‑138 (MQ=255)
ccAGTGTCTGCTCACGCAGCGCCTGGTTCATGTCACCGTTCAGCGCGGCGCTGTTGTAGCCGTTACGCTCAAGAGCTTCTGCCACTTCCAGAGTCGCGGTTTTGGG‑TGGAACGAAGATAATAGCCCCCTCaaaaaatt > 6:741652/1‑134 (MQ=255)
ccAGTGTCTGCTCACGCAGCGCCTGGTTCATGTCACCGTTCAGCGCGGCGCTGTTGTAGCCGTTACGCTCAAGAGCTTCTGCCACTTCCAGAGTCGCGGGTTTGGG‑TCGCACCAAGATAATCGCCGCCTCAAAATcat > 6:830183/1‑136 (MQ=255)
cAGTGTCTGCTCACGCAGCGCCTGGTTCATGTCACCGTTCAGCGCGGCGCTGTTGTAGCCGTTACGCTCAAGAGCTTCTGCCACTTCCAGAGTCGCGTTTTTGGT‑TAGAACGAAAATAATAACCGCAAAAAAATAtta > 7:589680/1‑137 (MQ=255)
tgggtCTGCTCACGCAGCGCCTGGTTCATGTCACCGTGCAGCGCGGGGCTGTTGTAGCCGTTACGCTCCAGAGCTTCTGCCACTTCCATAGTCGCGTTTTTGGT‑ACGAACGAAGATAATCGCCGCATCAAAATCTTcc < 6:156479/135‑1 (MQ=255)
gctgccGCAGCGACTGGTTCATGTCACCGTTCAGCGCGGCGATGTTGTATGCGTTACGCTCATGAGCTTCTGCCACTTCCAGAGTCGCTTTTTTGGG‑ACGAACGTAGATAATCGCCGCATCAAAATCTTCCGCTTCCa < 5:699543/133‑1 (MQ=255)
gCTCACGCAGCGCCTGGTTCATGTCACCGTTCAGCGCGGCGCTGTTGTAGCCGTTACGCTCAAGAGCTTCTGCCACTTCCAGAGTCGCGTTTTTGGT‑ACGAACGAAGATAATCGCCGCATCAAAATCTTCCGCTTCCa < 6:197747/138‑1 (MQ=255)
cTCACGCAGCGCCTGGTTCATGTCACCGTTCAGCGCGGCGCTGTTGTAGCCGTTACGCTCAAGAGCTTCTGCCACTTCCAGAGTCGCGGGTTTTGG‑AAGAACGCACATAATCGGCGCCTCAAAATCTTCAGCGTcccc > 8:282937/1‑136 (MQ=255)
cACGCAGCGCCTGGTTCATGTCACCGTTCAGCGCGGCGCTGTTGTAGCCGTTACGCTCAAGAGCTTCTGCCACTTCCAGAGTCGCGGTTTTGGT‑TAGAAAGCACATAAATGGCGCCTCAAAATATTAGGCGTGCAGGaaa > 3:129052/1‑140 (MQ=255)
cACGCAGCGCCTGGTTCATGTCACCGTTAAGCGCGGCGCTGTTGTAGCCGTTACGCGCAAGAGCGTCTGCCACTTCCAGAGGCGCGTTTTTGGT‑ACGAACGAAGATAATCGCCGCATCAAAATCTTCCGCTTCCAGGa < 2:636290/138‑1 (MQ=255)
aGCGCCTGGTTCATGTCACCGTTCAGCGCGGCGATGTGGTAGCCGTTACGCTCAAGAGCTTCTGCCACTTCCAGAGTCGCGTTTTTGGT‑ACGAACGAAGATAATCGCCGCATCAAAATCTTCCGCTTCCAGGAAACGTAc < 4:669708/140‑1 (MQ=255)
tCATGTCACCGTTCAGCGCGGCGCTGTTGTAGCCGTTACGCTCAAGAGCTTCTGCCACTTCCAGAGTCGCGTTTTTGGT‑TCGAACGAAGATAATCGCCGCATCAAAAACTTCCGCTTCCAGGAAAAGTAACAAGGCtt > 2:706452/1‑138 (MQ=255)
gTCACCGTTCAGCGCGGCGCTGTTGTAGCCGTTACGCTCAAGAGCTTCTGCCACTTCCAGAGTCGCGTTTTTGGT‑TAGAACGAAGATAATAGCCGCATAAAAAACTTACGCGTACAGGAAACGGACCACTGCATCGtttt > 4:180715/1‑140 (MQ=255)
gTCACCGTTCAGCGCGGCGCTGTTGTAGCCGTTACGCTCAAGAGCTTCTGCCACTTCCAGAGTCGCGGTTTTGGT‑TCGAACGAAGATAATAGCCGCCTCAAAATATTACCCATACAGGCAACGGAACAGGGCGTAGtt > 5:374092/1‑138 (MQ=255)
gcACCGGGCAGCGCGGCGCTGTTGTAGCCGTTACGCTCCAGAGCTTCTGCCACTTCCAGAGGCGCGTTTTTGGT‑ACGAACGAAGATACTCTCCGCATCAAAATCTTCCGCTTCCACGAAACGTACCAGTGCTTCGttt < 2:395771/137‑1 (MQ=255)
cggtCAGCGCGGCGCTGTTGTAGCCGTTACGCTCAAGAGCTTCTGCCACTTCCAGAGTCGCGTTTTTGGT‑ACGAACGAAGATAATCGCCGCATCAAAATCTTCCGCTTCCAGGAAACGTACCAGTGCTTCGTTTTTAc < 1:897038/135‑1 (MQ=255)
cGTTCAGGTCGGCGCTTTTGTAGCCGTTACGCTCAAGAGCTTCTGCCACATCCAGAGTCGCGTTTTTGGT‑ACGAACGAAGATAATCGCCGCATCAAAATCTTACGCTTCCAGGAAACGTACCAGTGCTTCGTTTTTACGc < 3:902414/140‑1 (MQ=255)
cGTTCAGCGCGGCGCTGTTGTAGCCGTTACGCTCAAGAGCTTCTGCCAGTTCCAGAGGCGCGGTTTTGGT‑ACGATCGAAGATAATCGCCGCATCAAAATCTTCCGCTTCCAGGAAACGTACCAGTGCTTCTTTTTTAc < 8:573596/138‑1 (MQ=255)
cGTTCAGCGCGGCGCTGTTGTAGCCGTTACGCTCAAGAGCTTCTGCCACTTCCAGAGTCGCGTTTTTGGT‑ACGAACGAAGATAATCGCCGCATCAAAATCTTCCGCTTCCAGGAAACGTACCAGTGCTTCGTTTTTAc < 2:929408/138‑1 (MQ=255)
cGTTCAGCGCGGCGCTGTTGTAGCCGTTACGCTCAAGAGCTTCTGCCACTTCCAGAGTCGCGTTTTTGGT‑ACGAACGAAGATAATCGCCGCATCAAAATCTTCCGCTTCCAGGAAACGTACCAGTGCTTCGTTTTTAc < 5:741652/138‑1 (MQ=255)
cGTTCAGCGCGGCGCTGTTGTAGCCGTTACGCTCAAGAGCTTCTGCCACTTCCAGAGTCGCGTTTTTGGT‑ACGAACGAAGATAATCGCCGCATCAAAATCTTCCGCTTCCAGGAAACGTACCAGTGCTTCGTTTTTAc < 7:282937/138‑1 (MQ=255)
cGTTCAGCGCGGCGCTGTTGTAGCCGTTACGCTCAAGAGCTTCTGCCACTTCCAGAGTCGCGTTTTTGGT‑ACGAACGAAGATAATCGCCGCATCAAAATCTTCCGCTTCCAGGAAACGTACCAGTGCTTCGTTTTTAc < 7:516207/138‑1 (MQ=255)
cGTTCAGCGCGGCGCTGTTGTAGCCGTTACGCTCAAGAGCTTCTGCCACTTCCAGAGTCGCGTTTTTGGT‑ACGAACGAAGATAATCGCCGCATCAAAATCTTCCGCTTCCAGGAAACGTACCAGTGCTTCGTTTTTAc < 7:68779/138‑1 (MQ=255)
cGTTCAGCGCGGCGCTGTTGTAGCCGTTACGCTCAAGAGCTTCTGCCACTTCCAGAGTCGCGTTTTTGGT‑ACGAACGAAGATAATCGCCGCATCAAAATCTTCCGCTTCCAGGAAACGTACCAGTGCTTCGTTTTTAc < 2:178024/138‑1 (MQ=255)
cGTTCAGCGCGGCGCTGTTGTAGCCGTTACGCTCAAGAGCTTCTGCCACTTCCAGAGTCGCGTTTTTGGT‑ACGAACGAAGATAATCGCCGCATCAAAATCTTCCGCTTCCAGGAAACGTACCAGTGCTTCGTTTTTAc < 1:35859/138‑1 (MQ=255)
cGTTCAGCGCGGCGCTGTTGTAGCCGTTACGCTCAAGAGCTTCTGCCACTTCCAGAGTCGCGTTTTTGGT‑ACGAACGAAGATAATCGCCGCATCAAAATCTTCCGCTTCCAGGAAACGTACCAGTGCTTCGTTTTTACGc < 3:413188/140‑1 (MQ=255)
cGTTCAGCGCGGCGCTGTTGTAGCCGTTACGCTCAAGAGCTTCTGCCACTTCCAGAGTCGCGTTTTTGGT‑ACGAACGAAGATAATCGCCGCATCAAAATCTTCCGCTTCCAGGAAACGTACCAGTGCTTCGTTTTTACGc < 3:218287/140‑1 (MQ=255)
cGTTCAGCGCGGCGCTGTTGTAGCCGTTACGCTCAAGAGCTTCTGCCACTTCCAGAGTCGCGTTTTTGGT‑ACGAACGAAGATAATCGCCGCATCAAAATCTTCCGCTTCCAGGAAACGTACCAGTGCTTCGTTTTTACGc < 4:292305/140‑1 (MQ=255)
cGTTCAGCGCGGCGCTGTTGTAGCCGTTACGCTCAAGAGCTTCTGCCACTTCCAGAGTCGCGTTTTTGGT‑ACGAACGAAGATAATCGCCGCATCAAAATCTTCCGCTTCCAGGAAACGTACCAGTGCTTCGTTTTTACGc < 4:423085/140‑1 (MQ=255)
cGTTCAGCGCGGCGCTGTTGTAGCCGTTACGCTCAAGAGCTTCTGCCACTTCCAGAGTCGCGTGTTTTGT‑TAGAACCAATATAATCGCCCCAAAAAAAAAATACGCTTACACGAAAATGACCAATGGTTAGTTTTTaaac > 4:911543/1‑137 (MQ=255)
cGTTCAGCGCGGCGCTGTTGTAGCCGTTACGCTCAAGAGCTTCTGCCACTTCCAGAGGCGCGTTTTTGGT‑ACGAACGAAGATAATCGCCGCATCAAAATCTTCCGCTTCCAGGAAACGTACCAGTGCTTCGTTTTTAc < 6:35379/138‑1 (MQ=255)
cGTTCAGCGCGGCGCTGTTGTAGCCGTTACGCTCAAGAGCTGCTGCCACTTCCAGAGTCGCGTTTTTGGT‑ACGAACGAAGATAATCGCCGCATCAAAATCTTCCGCTTCCAGGAAACGTACCAGTGCTTCGTTTTTACGc < 4:87528/140‑1 (MQ=255)
cGTTCAGCGCGGCGCTGTTGTAGCCGGTACGCTCAAGAGCTTCTGCCACTTCCAGAGTCGCGTTTTTGGT‑ACGAACGAAGATAATCGCCGCATCAAAATCTTCCGCTTCCAGGAAACGTACCAGTGCTTCGTTTTTACGc < 3:693491/140‑1 (MQ=255)
cGTTCAGCGCGGCGCGGTTGTAGCCGTTACGCTCAAGAGCTTCTGCCACTTCCAGAGTCGCGTTTTTGGT‑ACGAACGAAGATAATCGCCGCATCAAAATCTTCCGCTTCCAGGAAACGTACCAGTGCTTCGTTTTTAc < 8:515433/138‑1 (MQ=255)
cGTGCAGCGCGGCGCGGTTGTAGCCGTTACGCTCAAGAGCTTCTGCCACTTCCAGAGTCGCGTTGTTGGT‑ACGCACGAAGAGAATCGCCGCATCAAAATCTTCCGCTTCCAGGAAACGTACCAGTGCTTCGTTTTTAc < 6:394940/138‑1 (MQ=255)
gtgcAGCGCGGCGCTGTTGTAGCCGTTACGCTCAAGAGCTTCTGCCACTTCCAGAGTCGCGTTTTTGGT‑ACGAACGAAGATAATCGCCGCATCAAAATCTTCCGCTTCCAGGAAACGTACCAGTGCTTCGTTTTTACg < 1:251591/135‑1 (MQ=255)
ttCAGCGCGGCGCTGTTGTAGCCGTTACGCTCAAGAGCTTCTGCCACTTCCAGAGTCGCGTTTTTTGT‑TCGAACCCAGAAAATAGCCGCAAGAAAAAATTAAGCGTCCAGCGAACGGACCACGTCGTCGTTTTTACGc > 8:17880/1‑138 (MQ=255)
ttCAGCGCGGCGCTGTTGTAGCCGTTACGCTCAAGAGCTTCTGCCACTTCCAGAGTCGCGGTTTTTGT‑ACGAACGAAAATAATCGCCCCCTCAAAAAATTAAGCGTCCAGGAAACCTACCAGAGCTTAGGTTTTAAGc > 8:68779/1‑138 (MQ=255)
aGCGCGGCGCTGTTGTAGCCGTTACGCTCAAGAGCTTCTGCCACTTCCAGAGTCGCGGGTTTTGT‑ACGCACGAAGATAATCGCCGCATCAAAAACTTCCGCGTCCAGGTAACGGACCCTGGCTTGGTTTTTAAGCATa > 8:212842/1‑138 (MQ=255)
ggctCTGTTGTAGCCGTTACGCTCAAGAGCTTCTGCCACTTCCAGAGTCGCGTTTTTGGT‑ACGAACGAAGATAATCGCCGCATCAAAATCTTCCGCTTCCAGGAAACGTACCAGTGCTTCGTTTTTACGCATACCCCa < 7:467042/138‑1 (MQ=255)
ggcgCTGTTGTAGCCGTTACGCTCAAGAGCTTCTGCCACTTCCAGAGTCGCGTTTTTGGT‑ACGAACGAAGATAATCGCCGCATCAAAATCTTCCGCTTCCAGGAAACGTACCAGTGCTTCGTTTTTACGCATACCCCa < 1:561312/138‑1 (MQ=255)
ggcgCTGTTGTAGCCGTTACGCTCAAGAGCTTCTGCCACTTCCAGAGTCGCGTTTTTGGT‑ACGAACGAAGATAATCGCCGCATCAAAATCTTCCGCTTCCAGGAAACGTACCAGTGCTTCGTTTTTACGCATACCCCa < 2:761859/138‑1 (MQ=255)
ggcgCTGTTGTAGCCGTTACGCTCAAGAGCTTCTGCCACTTCCAGAGTCGCGTTTTTGGT‑ACGAACGAAGATAATCGCCGCATCAAAATCTTCCGCTTCCAGGAAACGTACCAGTGCTTCGTTTTTACGCATACCCCa < 6:884266/138‑1 (MQ=255)
ggcgCTGTTGTAGCCGTTACGCTCAAGAGCTTCTGCCACTTCCAGAGTCGCGTTTTTGGT‑ACGAACGAAGATAATCGCCGCATCAAAATCTTCCGCTTCCAGGAAACGTACCAGTGCTTCGTTTTTACGCATACCCCa < 5:2261/138‑1 (MQ=255)
ggcgCTGTTGTAGCCGTTACGCTCAAGAGCTTCTGCCACTTCCAGAGTCGCGTTTTTGGT‑ACGAACGAAGATAATCGCCGCATCAAAATCTTCCGCTTCCAGGAAACGTACCAGTGCTTCGTTTTTACGCATACCCCa < 2:215124/138‑1 (MQ=255)
ggcgCTGTTGTAGCCGTTACGCTCAAGAGCTTCTGCCACTTCCAGAGTCGCGTTTTTGGT‑ACGAACGAAGATAATCGCCGCATCAAAATCTTCCGCTTCCAGGAAACGTACCAGTGCTTCGTTTTTACGCATACCCCa < 5:837874/138‑1 (MQ=255)
ggcgCTGTTGTAGCCGTTACGCTCAAGAGCTTCTGCCACTTCCAGAGTCGCGTTTTTGGT‑ACGAACGAAGATAATCGCCGCATCAAAATCTTCCGCTTCCAGGAAACGTACCAGTGCTTCGTTTTTACGCATACCCCa < 5:438308/138‑1 (MQ=255)
ggcgCTGTTGTAGCCGTTACGCTCAAGAGCTTCTGCCACTTCCAGAGTCGCGTTTTTGGT‑ACGAACGAAGATAATCGCCGCATCAAAATCTTCCGCTTCCAGGAAACGTACCAGTGCTTCGTTTTTACGCATACCCCAGa < 3:319438/140‑1 (MQ=255)
ggcgCTGTTGTAGCCGTTACGCTCAAGAGCTTCTGCCAATTCCAGAGTCGCGTTTTTGGT‑ACGAACGAAGATAATCGCCGCATCAAAATCTTCCGCTTCCAGGAAACGTACCAGTGCTTCGTTTTTACGCATACCCCa < 5:830171/138‑1 (MQ=255)
ggcgCTGTTGTAGCCGTAACGCTCAATAGCTGCTGCCACTTCCAGAGTCGCGTTTTTGGT‑ACGAACGAAGATAATCGCCGCATCAAAATCTTCCGCTTCCAGGAAACGTACCAGTGCTTCGTTTTTACGCATACCCCAGa < 4:781189/140‑1 (MQ=255)
gcTGTTGTAGCTGTTACGATCACGAGCTTCTGCCACTTCCAGAGTCGCGTTTTTGGT‑ACGAACGAAGATAATAGCCGCATCAAAATCTTCCGCTTCCAGGAAACGTACCAGTGCTTCGTTTTTACGCATACCCCAGAc < 1:471327/138‑1 (MQ=255)
gcTGTTGTAGCCGTTACGCTCAAGAGCTTCTGCCACTTCCAGAGTCGCGTTTTTGGT‑ACGAACGAAGATAATCGCCGCATCAAAATCTTCCGCTTCCAGGAAACGTACCAGTGCTTCGTTTTTACGCATACCCCAGAc < 2:702009/138‑1 (MQ=255)
gcTGTTGTAGCCGTTACGCTCAAGAGCTTCTGCCACTTCCAGAGTCGCGTTTTTGGT‑ACGAACGAAGATAATCGCCGCATCAAAATCTTCCGCTTCCAGGAAACGTACCAGTGCTTCGTTTTTACGCATACCCCAGAc < 2:852854/138‑1 (MQ=255)
cTGTTGTAGCCGTTACGCTCAAGAGCTTCTGCCACTTCCAGAGTCGCGTTTTTGGT‑ACGTACGAAGATAATCGCCGCATCAAAATCTTCCGCTTCCAGGAAACGTACCTGTGCTTCGTTTTTACGCATACCCCAGACAGt < 3:568124/140‑1 (MQ=255)
cTGTTGTAGCCGTTACGCTCAAGAGCTTCTGCCACTTCCAGAGTCGCGTTTTTGGT‑ACGAACGAAGATAATCGCCGCATCAAAATCTTCCGCTTCCAGGAAACGTACCAGTGCTTCGTTTTTACGCATACCCCAGACa < 5:920777/138‑1 (MQ=255)
cTGTTGTAGCCGTTACGCTCAAGAGCTTCTGCCACTTCCAGAGTCGCGGTTTTGTG‑TCGAACGAAACTAATCGCCGCCTCAAAAAGTTACGCGTCCCTGAACCGGACCACTGCTTCGTTTTTAAGGGTAccccccacc > 2:219434/1‑133 (MQ=255)
ttggAGCCGTTACGCTCAAGAGCTTCTGCCACTTCCAGAGTCGCGGTTTTGGT‑ACGAACGAAGATAATCGCCGCATCAAAATCTTCCGCTTCCAGGAAACGTACCAGTGCTTCGTTTTTACGCATACCCCAGACAGTc < 6:689743/138‑1 (MQ=255)
tgtAGCCGTTACGCTCAAGAGCTTCTGCCACTTCCAGAGTCGCTTTTTTGGT‑AAGAACGAATATAATCGCCTCATCAAAATCTTCCGCTTCCAGTAAACGTACCAGTGCTTCGTTTTTACGCATACCCCAGACAGTcc < 2:810056/138‑1 (MQ=255)
tgtAGCCGTTACGCTCAAGAGCTTCTGCCACTTCCAGAGTCGCGTTTTTGGT‑ACGAACGAAGATAATCGCCGCATCAAAATCTTCCGCTTCCAGGAAACGTACCAGTGCTTCGTTTTTACGCATACCCCAGACAGTcc < 1:254293/138‑1 (MQ=255)
tgtAGCCGTTACGCTCAAGAGCTTCTGCCACTTCCAGAGTCGCGTTTTTGGT‑ACGAACGAAGATAATCGCCGCATCAAAATCTTCCGCTTCCAGGAAACGTACCAGTGCTTCGTTTTTACGCATACCCCAGACAGTcc < 6:79020/138‑1 (MQ=255)
tgtAGCCGTTACGCGAAAGAGCTTCTGCCACTTCCAGAGTCGCGTTTTTGGT‑ACGCACGAAGATTATCGACGCATCAAAATCTTCCGCTTCCAGTAAACGTACCAGTGCTTCGTTTTTACGCATACCCCAGACAGTcc < 7:356684/138‑1 (MQ=255)
gtAGCCGTTACGCTCAAGAGCTTCTGCCACTTCCCGAGTCGCGTTTTTGGT‑ACGCACGAAGATAATCGCCGCATCAAAATCTTCCGCTTCCAGGAAACGTACCAGTGCTTCGTTTTTACGCATACCCCAGACAGTCCa < 6:36861/138‑1 (MQ=255)
gtAGCCGTTACGCTCAAGAGCTTCTGCCACTTCCAGAGTCGCGTTTTTGGT‑ACGAACGAAGATAATCGCCGCATCAAAATCTTCCGCTTCCAGGAAACGTACCAGTGCTTCGTTTTTACGCATACCCCAGACAGTCCAGt < 4:624586/140‑1 (MQ=255)
cGTTACGCTCAAGAGCTTCTGCCACTTGCTGAGTCGCGTTTTTGGT‑ACGAACGAAGATAATCGCCGCATCAAAATCTTCCGCTTCCAGGAAACGTACCAGTGCTTCGTTTTTACGAATACCCCAGACAGACCAGTAGc < 7:74322/138‑1 (MQ=255)
cGTTACGCTCAAGAGCTTCTGCCACTTCCAGAGTCGCGTTTTTTGT‑TAGAAAGAAGATAATAGACGGATAAAAATCTTACGCTTACAGGAAACGTAGAAGGTGTTAGTTTTTTAGACTAACCCAAAcagtacagtatg > 8:62003/1‑136 (MQ=255)
cGTTACGCTCAAGAGCTTCTGCCACTTCCAGAGTCGCGGTTTTGGT‑ACGAACGAAGAGAATCGCCGCCACAAAATATTACGCTTGCTCGAAACGTACCAGTGGTGCGTTTTTAAGCAGACCCCCGACAGTGCAGTAGc > 8:709234/1‑138 (MQ=255)
cGTTACGCTCAAGAGATTCTGCAAATTCCAGATTCGCGTTTTTGGT‑ACGAACTAAGATAATCGCCGAATCAAAATATTCCGATTCCATGAAACGTACCAGTTCTTCGATTTTACGCATACCCCAGACAGTCCAGTAGc < 8:441672/138‑1 (MQ=255)
aCGCTCAAGAGCTTCTGCCACTTCCAGAGTCGCGTTTTTGGT‑ACGAACGAAGATAATCGCCGCATCAAAATCTTCCGCTTCCAGGAAACGTACCAGTGCTTCGTTTTTACGCATACCCCAGACAGTCCAGTAGCTCTg < 2:131420/138‑1 (MQ=255)
ctcTCAAGAGCTTCTGCCACTTCCAGAGTCGCGTTTTTGGT‑ACGAACGAAGATAATCGCCGCATCAAAATCTTCCGCTTCCAGGAAACGTACCAGTGCTTCGTTTTTACGCATACCCCAGACAGTCCAGTAGCTCTgg < 2:623866/136‑1 (MQ=255)
cGCTCAAGAGCTTCTGCCACTTCCAGAGTCGCGTTTTTGGT‑ACGAACGAAGATAATCGCCGCATCAAAATCTTCCGCTTCCAGGAAACGTACCAGTGCTTCGTTTTTACGCATACCCCAGACAGTCCAGTAGCTCTGGCt < 4:770344/140‑1 (MQ=255)
gCTCAAGAGCTGCTGCCACTTCCAGAGACGCGTTTTTGGT‑ACGAACGAAGATAATCGCCGCATCAAAATCTTCCGCTTCCAGGAAACGTACCAGTGCTTCGTTTTTCCGCATACCGCAGACAGTCCAGTAGCTCTGGCTg < 3:119710/140‑1 (MQ=255)
agagCTTCTGCCACTTCCAGAGTCGCGTTTTTGGT‑ACGAACGAAGATAATCGCCGCATCAAAATCTTCCGCTTCCAGGAAACGTACCAGTGCTTCGTTTTTACGCATACCCCAGACAGTCCAGTAGCTCTGGCTGATGTc < 4:455727/140‑1 (MQ=255)
cACTTCCAGAGTCGCGTTTTTTTT‑ACGAAAGAAGAAAAAAGCCGCCTCAAAATATTGCGCGTCCAGGAAACGGACCACTGCTTGGGTTTTTAGGATACACCCGACAGTGCCATAGCACTGGGGGTTGTGAGGGCgggg > 2:563439/1‑137 (MQ=255)
cACTTCCAGAGTCGCGTTTTTGGT‑ACGAACGAAGATAATCGCCGCATCAAAATCTTCCGCTTCCAGGAAACGTACCAGTGCTTCGTTTTTACGCATACCCCAGACAGTCCAGTAGCTCTGGCTGATGTCAGGACGGGt < 1:706452/138‑1 (MQ=255)
cACTTCCAGAGTCGCGTTTTTGGT‑ACGAACGAAGATAATCGCCGCATCAAAATCTTCCGCTTCCAGGAAACGTACCAGTGCTTCGTTTTTACGCATACCCCAGACAGTCCAGTAGCTCTGGCTGATGTCAGGACGGGTAg < 3:645059/140‑1 (MQ=255)
cACTTCCAGAGTCGCGTGTTTGCT‑ACTAACGAAGATAATCGCCGCATCAAAATCTTCCGCTTCCAGGAAACGTACCAGTGCTTCGTTTTTACGCATACCCCAGACAGTCCAGTAGCTCTGGCTGATGTCAGGACGGGt < 5:613669/138‑1 (MQ=255)
cACTTCAAGAGTCGCGTTTTTGGT‑ACGAACGAAGATAATCGCCGCATCAAAATCTTCCGCTTCCAGGAAACGTACCAGTGCTTAGTTTTTACGCATCCCCCAGACAGTCCAGTAGCTCTGGCTGATGTCAGGACGGGt < 1:754234/138‑1 (MQ=255)
ccAGAGTCGCGGTTTTGGT‑ACGAAGGAATATAATCGCCGGAGCTAAATCTTCCGATTACAGGAAACGTACCAGTGCTTCGTTTTTACGCATACCCCAGACAGTCGAGTATCTCTGGCTGATGTCATGACGGGTAGTCACg < 3:561570/140‑1 (MQ=255)
ccAGAGACGCGTTTTTGGT‑ACGAACGAAGATAATCGCCGCATCAAAAACTTCCGCTGCCAGGAAACGTACCAGTGCTTCGTTTTTACGCATACCCCAGACAGTCCAGTAGCTCTGGCTGATGTCAGGACGGGTAGTCa < 8:538518/138‑1 (MQ=255)
caagacTCGCGTTTTTGGT‑ACGAAAGAAGATAATCGCGGAATCAGTATCTTCCGCTTCCAGGAAACGTACCAGTGCTTCGTTTTTACGCATACCCCAGACAGTCCAGTAGCTCTGGCTGATGTCAGGACGGGTAGTCa < 8:511748/136‑1 (MQ=255)
agTCGCGTTTTTGGT‑ACGAACTAAGATAATCGCCGCATCAAAATCTTCCGCTTCCAGGAAACGTACCAGTGCTTCGTTTTTACGCATACCCCAGACAGTCCAGTAGCTCTGGCTGATGTCAGGACGGGTAGTCACGCt < 7:191083/138‑1 (MQ=255)
tCGCGTTTTTGGT‑ACGAACGAAGATAATCGCCGCATCAAAATCTTCCGCTTCCCGGAAACGTACCAGGGCTTGGTTTTTACGCATACCCCAGACAGTCCAGTAGCTCTGGCTGATGTCAGGACGGGTAGTCACGCTGGAc < 4:499344/140‑1 (MQ=255)
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CGCAATCAGGATGTCCAGACGACCATCTTTCAGGCGTTCCAGTGTCTGCTCACGCAGCGCCTGGTTCATGTCACCGTTCAGCGCGGCGCTGTTGTAGCCGTTACGCTCAAGAGCTTCTGCCACTTCCAGAGTCGCGTTTTTGGT‑ACGAACGAAGATAATCGCCGCATCAAAATCTTCCGCTTCCAGGAAACGTACCAGTGCTTCGTTTTTACGCATACCCCAGACAGTCCAGTAGCTCTGGCTGATGTCAGGACGGGTAGTCACGCTGGAC > NZ_CP022686/2048953‑2049223
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| Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
N/A
