Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A26 F36 I0 R1
|
149 |
10545.8 |
7272710 |
98.3% |
7149073 |
134.9 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
freq |
annotation |
gene |
description |
| RA |
NZ_CP022686 |
2,049,089 |
T→G |
14.9% |
N256T (AAC→ACC) |
deaD ← |
ATP‑dependent RNA helicase DeaD |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NZ_CP022686 | 2,049,089 | 0 | T | G | 14.9%
| 270.3
/ 16.2
| 153 | N256T (AAC→ACC) | deaD | ATP‑dependent RNA helicase DeaD |
| Reads supporting (aligned to +/- strand): ref base T (12/113); new base G (24/2); total (36/117) |
| Fisher's exact test for biased strand distribution p-value = 7.28e-17 |
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 |
Only 100 of 157 total aligned reads displayed.
CGCAATCAGGATGTCCAGACGACCATCTTTCAGGCGTTCCAGTGTCTGCTCACGCAGCGCCTGGTTCATGTCACCGTTCAGCGCGGCGCTGTTGTAGCCGTTACGCTCAAGAGCTTCTGCCACTTCCAGAGTCGCGTTTTTGGTACGAACGAAGATAATCGCCGCATCAAAATCTTCCGCTTCCAGGAAACGTACCAGTGCTTCGTTTTTACGCATACCCCAGACAGTCCAGTAGCTCTGGCTGATGTCAGGACGGGTAGTCACGCTGGACT > NZ_CP022686/2048953‑2049224
|
gCAATCAGGATGTCCAGACGACCATCTTTCAGGCGTTCCAGTGTCTGCTCACGCAGCGCCTGGTTCATGTCACCGTTCAGCGCGGCGCTGTTGTAGCCGTTACGCTCAAGAGCTTCTGCCACTTCCAGAGTCGCGttt < 3:150263/138‑1 (MQ=255)
tCAGGATGTCCAGACGACCATCTTTCAGGCGTTCCAGTGTCTGCTCACGCAGCGCCTGGTTCATGTCACCGTTCAGCGCGGCGCTGTTGTAGCCGTTACGCTCAAGAGCTTCTGCCACTTCCAGAGTCGCGTTTTTGGTa < 6:435097/140‑1 (MQ=255)
tCAGGATGTCCAGACGACCATCTTTCAGGCGTTCCAGTGTCTGCTCACGCAGCGCCTGGTTCATGTCACCGTTCAGCGCGGCGCTGTTGTAGCCGTTACGCTCAAGAGCTTCTGCCACTTCCAGAGTCGCGGGTTTgg > 4:736378/1‑138 (MQ=255)
tCAGGATGTCCAGACGACCATCTTTCAGGCGTTACAGTGTCTGCTCACGCAGCGCCTGGTTCATGTCACCGTTCAGCGCGGCGCTGTTGTAGCCGTTACGCTCAAGAGCTTCTGCCACTTCCAGAGTCGCGTTTTTgg < 8:428843/138‑1 (MQ=255)
tGTCCAGACGACCATCTTTCAGGCGTTCCAGTGGCTGCTCACGCAGCGCCTGGTTCATGTCACCGTTCAGCGCGGCGCTGTTGTAGCCGTTACGCTCAAGAGCTTCTGCCACTTCCAGAGTCGCGTTTTTGGTacgaacg < 5:295052/140‑1 (MQ=255)
ggTCCAGACGACCATCTTTCAGGCGTTCCAGGGTCTGCTCACGCAGCGCCTGGTTCATGTCACCGTTCAGCGCGGCGCTGTTGTAGCCGTTACGCTCAAGAGCTTCTGCCACTTCCAGAGTCGCGTTTTTGGTacgaa < 3:436438/137‑1 (MQ=255)
cAGACGACCATCTTTCAGGCGTTCGAGTGTCTGCTCACGCAGCGCCTGGTTCATGTCACCGTTCAGCGCGGCGCTGTTGTAGCCGTTACGCTCAAGAGCTTCTGCCACTTCCAGAGTCGCGGTTTTGGTTcgaaagaa > 1:921076/1‑138 (MQ=255)
gacCATCTTTCAGGCGTTCCAGTGTCTGCTCACGCAGCGCCTGGTTCATGTCACCGTTCAGCGCGGCGCTGTTGTAGCCGTTACGCTCAAGAGCTTCTGCCACTTCCAGAGTCGCGTTTTTTGGAGGAACGGAGAtta > 3:109908/1‑136 (MQ=255)
ccATCTTTCAGGCGTTCCAGTGTCTGCTCACGCAGCGCCTGGTTCATGTCACCGTTCAGCGCGGCGCTGTTGTAGCCGTTACGCTCAAGAGCTTCTGCCACTTCCAGAGTCGCGTTTTTGGTACGAACGAAGATAATc < 8:801866/138‑1 (MQ=255)
tCTTTCAGGCGTTCCAGTGTCTGCTCACGCAGCGCCTGGTTCATGTCACCGTTCAGCGCGGCGCTGTTGTAGCCGTTACGCTCAAGAGCTTCTGCCACTTCCAGAGTCGCGGTTTTTGTTCGAACGAAGATAATagcc > 4:286488/1‑138 (MQ=255)
tCTTTCAGGCGTTCCAGTGTCTGCTCACGCAGCGCCTGGTTCATGTCACCGTTCAGCGCGGCGCTGTTGTAGCCGTTACGCTCAAGAGCTTCTGCCACTTCCAGAGTCGCGGTTTTGGTTAGAACGAAGATAAtaggc > 4:616102/1‑134 (MQ=255)
tCTTTCAGGCGTTCCAGTGTCTGCTCACGCAGCGCCTGGTTCATGTCACCGTTCAGCGCGGCGCTGTTGTAGCCGTTACGCTCAAGAGCTTCTGCCACTTCCAGAGTCGCGGTTTTGGGTCGAAAGAAGATaaaagcc > 2:526607/1‑133 (MQ=255)
tttCAGGCGTTCCAGTGTCTGCTCACGCAGCGCCTGGTTCATGTCACCGTTCAGCGCGGCGCTGTTGTAGCCGTTACGATCAAGAGCTTCTGCCACTTCCAGAGTCGCGGGTTTGTGTCGTCCGAAGATAATagccgc > 7:64972/1‑138 (MQ=255)
aGGCGTTCCAGTGTCTGCTCACGCAGCGCCTGGTTCATGTCACCGTTCAGCGCGGCGCTGTTGTAGCCGTTACGCTCAAGAGCTTCTGCCACTTCCAGAGTCGCGTTTTTGGTACGAACGAAGATAATCGCCGCATCa < 2:820358/138‑1 (MQ=255)
ccAGTGTCTGCTCACGCAGCGCCTGGTTCATGTCACCGTTCAGCGCGGCGCTGTTGTATCCGTTACGCTCATGAGCTTCTGCCACTTCCAGAGTCGCGGTTTTGGTTAGGTCGAAGCTAATAGCCGGAGCaaaaaagt > 8:424619/1‑134 (MQ=255)
ccAGTGTCTGCTCACGCAGCGCCTGGTTCATGTCACCGTTCAGCGCGGCGCTGTTGTAGCCGTTACGCTCAAGAGCTTCTGCCACTTCCAGAGTCGCGGTGTTGGTTCGAACGAATCTAATACCCGCAACAAAAtaat > 1:136179/1‑135 (MQ=255)
cattgtCTGCTCACGCAGCGCCTGGTTCATGTCACCGTTCAGCGCGGCGCTGTTGTAGCCGTTACGCTCAAGAGCTTCTGCCACTTCCAGAGTCGCGTTTTTGGTACGAACGAAGATAATCGCCGCATCAAAATCTTc < 2:782443/135‑1 (MQ=255)
cAGTGTCTGCTCACGCAGCGCCTGGTTCATGTCACCGTTCAGCGCGGCGCTGTTGTAGCCGTTACGCTCAAGAGCTTCTGCCACTTCCAGAGTCGCGGGTTTGGTTGGTACCCAGAAAAAAGCCGCAAAAAAATCtat > 3:489281/1‑136 (MQ=255)
gcgcACGCAGCGCCTGGTTCATGTCACCGTTCAGCGCGGCGCTGTTGTAGCCGTTACGCTCAAGAGCTTCTGCCACTTCCAGAGTCGCGTTGTTGGTACGAACGAAGATAATCGCCGCATCAAAATCTTCCGCTTCCa < 8:294030/135‑1 (MQ=255)
gCTCACGCAGCGCCTGGTTCATGTCACCGTTCAGCGCGGCGCTGTTGTAGCCGTTACGCTCAAGAGCTTCTGCCACTTCCAGAGTCGCGTTTTTGGTACGAACGAAGATAATCGCCGCATCAAAATCTTCCGCTTCCa < 8:711235/138‑1 (MQ=255)
gCTCACGCAGCGCCTGGTTCATGTCACCGGTCAGCGCGGCGCTGTTGTAGCCGTTACGCTCAAGAGCTTCTGCCACTTCCAGAGTCGCGTTTTTGGTACGAACGAAGATAATCGCCGCATCAAAATCTTCCGCTTCCa < 1:538733/138‑1 (MQ=255)
tCACGCAGCGCCTGGTTCATGTCACCGTGCAGCGCGGCGCTGTTGTAGCCGTTACGCTCAAGAGCTTCTGCCACTTCCAGAGTCGCGTTTTTGGTACGAACGAAGATAATCGCCGCATCAAAATCTTCCGCTTCCAgg < 7:592457/138‑1 (MQ=255)
cACGCAGCGCCTGGTTCATGTCACCGTTCAGCGCGGCTCTGTTGTAGCCGTTACGCTCAAGAGCTTCTGCCACTTCCAGAGTCGCGTTTTTGGTACGAACGAAGATAATCGCCGCATCAAAATCTTCCGCTTCCAGGa < 4:465622/138‑1 (MQ=255)
cACGCAGCGCCTGGTTCATGTCACCGTTCAGCGCGGCGCTGTTGTAGCCGTTACGCTCAAGAGCTTCTGCCACTTCCAGAGTCGCGTTTTTGGTACGAACGAAGATAATCGCCGCATCAAAATCTTCCGCTTCCAGGa < 4:73517/138‑1 (MQ=255)
cACGCAGCGCCTGGTTCATGTCACCGTTCAGCGCGGCGCTGTTGTAGCCGTTACGCTCAAGAGCTTCTGCCACTTCCAGAGTCGCGTTTTTGGTACGAACGAAGATAATCGCCGCATCAAAATCTTCCGCTTCCAGGa < 4:460613/138‑1 (MQ=255)
cACGCAGCGCCTGGTTCATGTCACCGTGCAGCGCGGCGCTGTTGTAGCCGTTACGCTCAAGAGCTTCTGCCACTTCCAGAGTCGCGTTTTTGGTACGAACGAAGATAATCGCCGCATCAAAATCTTCCGCTTCCAGGa < 3:744865/138‑1 (MQ=255)
aGCGCCTGGTTCATGTCACCGTTCAGCGCGGCGCTGTTGTAGCCGTTACGCTCAAGAGCTTCTGCCACTTCCAGAGTCGCGTTTTTGGTACGAACGAAGATAATCGCCGCATCAAAATCTTCCGCTTCCAGGAAACGTAc < 6:201165/140‑1 (MQ=255)
gcgcCTGGTTCATGTCACCGTTCAGCGCGGCGCTGTTGTAGCCGTTACGCTCAAGAGCTTCTGCCACTTCCAGAGTCGCGGTTTTTGTTCGAACCAAGATAAAAGCCGCAACAAAATCATCCGCGTACAGGAAAAGtt > 2:422944/1‑137 (MQ=255)
ggTTCATGTCACCGGTCAGCGCGGCGCTGTTGTAGCCGTTACGCTCAAGAGCTTCTGCCACTTCCAGAGTCGCGTTTTTGGTACGAACGAAGATAATCGCCGCATCAAAATCTTCCGCTTCCAGGAAACGTACCAGTg < 4:533946/138‑1 (MQ=255)
gTTCATGTCACCGTTCAGCGCGTCGCTGTTGTAGCCGTTACGCTCAAGAGCTTCTGCCACTTCCAGAGTCGCGTTTTTGGTACGAACGAAGATAATCGCCGAATCAAAATCTTCCGCTTCCAGGAAACGTACCAGTGc < 4:845377/138‑1 (MQ=255)
gTTCATGTCACCGTTCAGCGCGGCGCTGTTGTAGCCGTTACGCTCAAGAGCTTCTGCCACTTCCAGAGTCGCGGTTTTGGTTCGAAAGCAGATAATACCCGCAAAAAAAAAGTAAGCTTCCAGCGAACGTACCAGTGCtt > 5:604358/1‑140 (MQ=255)
gTCACCGTTCAGCGCGGCGCTGTTGTAGCCGTTACGCTCAAGAGCTTCTGCCACTTCCAGAGTCGCGTTTTTGGTACGAACGAAGATAATCGCCGCATCAAAATCTTCCGCTTCCAGGAAACGTACCAGTGCTTCGtt < 3:293578/138‑1 (MQ=255)
cggtCAGCGCGGCGCTGTTGTAGCCGTTACGCTCAAGAGCTTCTGCCACATCCAGAGTCGCGTTTTTGGTACGAACGAAGATAATCGCCGCATCAAAATCTTCCGCTTCCAGGAAACGTACCAGTGCTTCGTTTTTACGc < 5:130897/137‑1 (MQ=255)
cGTTCCGCGCGGCGCGGTTGTAGCCGTTACGCTCAAGAGCTTCTGCCACTTCCAGAGTCGCGTTTTTGGTACGAACGAAGATAATCGCCGCATCAAAATCTTCCGCTTCCAGGAAACGTACCAGTGCTTCGTTTTTAc < 2:816501/138‑1 (MQ=255)
cGTTCAGCGCGGCGCTGTTGTATCCGTTACGCTCAAGAGCTTCTGCCACTTCCAGAGTCGCGTTTTTGGTACGAACGAAGATAATCGCCGCATCAAAATCTTCCGCTTCCAGGAAACGTACCAGTGCTTCGTTTTTAc < 3:242625/138‑1 (MQ=255)
cGTTCAGCGCGGCGCTGTTGTAGCCGTTACGCTCAAGATCTTCTGCCTCTTCCAGAGTCGCGTTTTTGGTACGAACGAAGATAATCGCCGCATCAAAATCTTCCGCTTCCATGAAACGTACCAGTGCTTCGTTTTTAc < 4:884039/138‑1 (MQ=255)
cGTTCAGCGCGGCGCTGTTGTAGCCGTTACGCTCAAGAGCTTCTGCCTCTTCCAGAGTCGCGTTTTTGGTACGAACGAAGATAATCGCCGCATCAAAATCTTCCGCTTCCATGAAACGTACCAGTGCTTCGTTTTTAc < 4:109919/138‑1 (MQ=255)
cGTTCAGCGCGGCGCTGTTGTAGCCGTTACGCTCAAGAGCTTCTGCCACTTCCAGAGTCGCGTTTTTGGTACGAACGAAGATAATCGCCGCATCAAAATCTTCCGCTTCCAGGAAACGTACCAGTGCTTCGTTTTTActc < 6:429101/140‑3 (MQ=255)
cGTTCAGCGCGGCGCTGTTGTAGCCGTTACGCTCAAGAGCTTCTGCCACTTCCAGAGTCGCGTTTTTGGTACGAACGAAGATAATCGCCGCATCAAAATCTTCCGCTTCCAGGAAACGTACCAGTGCTTCGTTTTTAc < 2:806975/138‑1 (MQ=255)
cGTTCAGCGCGGCGCTGTTGTAGCCGTTACGCTCAAGAGCTTCTGCCACTTCCAGAGTCGCGTTTTTGGTACGAACGAAGATAATCGCCGCATCAAAATCTTCCGCTTCCAGGAAACGTACCAGTGCTTCGTTTTTAc < 7:21418/138‑1 (MQ=255)
cGTTCAGCGCGGCGCTGTTGTAGCCGTTACGCTCAAGAGCTTCTGCCACTTCCAGAGTCGCGTTTTTGGTACGAACGAAGATAATCGCCGCATCAAAATCTTCCGCTTCCAGGAAACGTACCAGTGCTTCGTTTTTAc < 1:319846/138‑1 (MQ=255)
cGTTCAGCGCGGCGCTGTTGTAGCCGTTACGCTCAAGAGCTTCTGCCACTTCCAGAGTCGCGTTTTTGGTACGAACGAAGATAATCGCCGCATCAAAATCTTCCGCTTCCAGGAAACGTACCAGTGCTTCGTTTTTAc < 8:324509/138‑1 (MQ=255)
cGTTCAGCGCGGCGCTGTTGTAGCCGTTACGCTCAAGAGCTTCTGCCACTTCCAGAGTCGCGTTTTTGGTACGAACGAAGATAATCGCCGCATCAAAATCTTCCGCTTCCAGGAAACGTACCAGTGCTTCGTTTTTAc < 1:308099/138‑1 (MQ=255)
cGTTCAGCGCGGCGCTGTTGTAGCCGTTACGCTCAAGAGCTTCTGCCACTTCCAGAGTCGCGTTTTTGGTACGAACGAAGATAATCGCCGCATCAAAATCTTCCGCTTCCAGGAAACGTACCAGTGCTTCGTTTTTAc < 1:164417/138‑1 (MQ=255)
cGTTCAGCGCGGCGCTGTTGTAGCCGTTACGCTCAAGAGCTTCTGCCACTTCCAGAGTCGCGTTTTTGGTACGAACGAAGATAATCGCCGCATCAAAATCTTCCGCTTCCAGGAAACGTACCAGTGCTTCGTTTTTAc < 1:935790/138‑1 (MQ=255)
cGTTCAGCGCGGCGCTGTTGTAGCCGTTACGCTCAAGAGCTTCTGCCACTTCCAGAGTCGCGTTTTTGGTACGAACGAAGATAATCGCCGCATCAAAATCTTCCGCTTCCAGGAAACGTACCAGTGCTTCGTTTTTAc < 2:17596/138‑1 (MQ=255)
cGTTCAGCGCGGCGCTGTTGTAGCCGTTACGCTCAAGAGCTTCTGCCACTTCCAGAGTCGCGTTTTTGGTACGAACGAAGATAATCGCCGCATCAAAATCTTCCGCTTCCAGGAAACGTACCAGTGCTTCGTTTTTAc < 4:562534/138‑1 (MQ=255)
cGTTCAGCGCGGCGCTGTTGTAGCCGTTACGCTCAAGAGCTTCTGCCACTTCCAGAGTCGCGTTTTTGGTACGAACGAAGATAATCGCCGCATCAAAATCTTCCGCTTCCAGGAAACGTACCAGTGCTTCGTTTTTAc < 2:462252/138‑1 (MQ=255)
cGTTCAGCGCGGCGCTGTTGTAGCCGTTACGCTCAAGAGCTTCTGCCACTTCCAGAGTCGCGTTTTTGGTACGAACGAAGATAATCGCCGCATCAAAATCTTCCGCTTCCAGGAAACGTACCAGTGCTTCGTTTTTACGc < 6:753072/140‑1 (MQ=255)
cGTTCAGCGCGGCGCTGTTGTAGCCGTTACGCTCAAGAGCTTCTGCCACTTCCAGAGTCGCGTTTTTGGTACGAACGAAGATAATCGCCGCATCAAAATCTTCCGCTTCCAGGAAACGTACCAGTGCTTCGTTTTTACGc < 5:614178/140‑1 (MQ=255)
cGTTCAGCGCGGCGCTGTTGTAGCCGTTACGCTCAAGAGCTTCTGCCACTTCCAGAGTCGCGGTTTTGGTTCGGACGCAGATAATAGCCGCCTCAAAATAATGCCCTTCCCCGTAACGTACCAGGGCTTCGTGTTTAAGc > 5:826200/1‑140 (MQ=255)
cGTTCAGCGCGGCGCTGTTGTAGCCGTTACGCTCAAGAGCTTCTGCCACTTCCAGAGGCGCGTTTTTGGTACGAACGAAGATAATCGCCGCATCAAAATCTTCCGCTTCCAGGAAACGTACCAGTGCTTCGTTTTTAc < 4:41729/138‑1 (MQ=255)
cGTTCAGCGCGGCGCTGTTGTAGCCGTTACGCTCAAGAGCTTCTGCCACTTCCAGAGGCGCGTTTTTGGTACGAACGAAGATAATCGCCGCATCAAAAGCTTCCGCTTCCAGGAAACGTACCAGTGCTTCGTTTTTAc < 8:561678/138‑1 (MQ=255)
cGTTCAGCGCGGCGCTGTTGTAGCCGTAACGCTCAAGAGCTTCTGCCACTTCCAGAGTCGCGTTTTTGGTACGAACGAAGATAATCGCCGCATCAAAATCTTCCGCTTCCAGGAAACGTACCAGTGCTTCGTTTTTAc < 3:332306/138‑1 (MQ=255)
cGTTCAGCGCGGCGCTGTTGTAGCCGGTACGCTCAAGAGCTTCTGCCACTTCCAGAGTCGCGTTTTTGGTACGAACGAAGATAATCGCCGCATCAAAATCTTCCGCTTCCAGGAAACGTACCAGTGCTTCGTTTTTAc < 3:837928/138‑1 (MQ=255)
cGTTCAGCGCGGCGCTGTTGTAGCAGTTACGCTCAAGAGCTTCTGCCACTTCCAGAGGCGCGTTTTTGGTACGAACGAAGATAATCGCCGCATCAAAATCTTCCGCTTCCAGGAAACGTACCAGTGCTTCGTTTTTACGc < 6:586136/140‑1 (MQ=255)
cGTGCAGCGCGGCGCTGTTGGAGCCGTTACGCTCAAGAGCTTCTGCCACTTCAAGAGTCGCGTTTTTGGTACGAACGAAGATAATCGCCGCATGAAAATCTTCCGCTTCCAGGAAACGTACCAGTGATTCGGTTTTACGc < 6:204320/140‑1 (MQ=255)
gTTCAGCGCGGCGCTGTTGTAGCCGTTACGCTCAAGAGCTTCTGCCACTTCCAGAGTCGCGTTTTTGGTACGAACGAAGATAATCGCCGCATCAAAATCTTCCGCTTCCAGGAAACGTACCAGTGCTTCGTTTTTACg < 2:799072/138‑1 (MQ=255)
cttCCGCGCGGCGCTGTAGTAGCCGTTACGCTCAAGAGATTCTGCCACTTCCAGAGTCGCGTTTTTTGTACGAACGAAGATAATCGCCGCCTCAAAATCTTCCGCTTCCAGGAAACGTACCAGTGCTTCGTTTTTACg < 3:824485/137‑1 (MQ=255)
ttCAGCGCGGCGCTGTTGTAGCCGTTACGCTCAAGAGCTTCTGCCACTTCCAGAGTCGCGTGTTTTTTACTAACCAAACTAATAGCCCCCTCAAAATCATACCCGTACAGGAAACGGACCAGTGCGTCGTTGTTActc > 8:62316/1‑136 (MQ=255)
tCAGCGCGGCGCTGTTGTAGCCGTTACGCTCAAGAGCTTCTGCCACTTCCAGAGTCGCGTTTTTGGTACGAACGAAGATAATCGCCGCATCAAAATCTTCCGCTTCCAGGAAACGTACCAGTGCTTCGTTTTTACGCa < 8:166553/138‑1 (MQ=255)
tCAGCGAGGCGCTGTTGTAGCCGTTACGCTAAATAGCTTCTGCCACTTCCAGAGTCGCGTTTTGGGTACGAACGAAGATAATCGCCGCATCAAAATCTTACTCTTCCAGGAAACGTACCAGTGCTTCGTTTTTACGCATa < 6:4532/140‑1 (MQ=255)
gcggcgCTGTTGTAGCCGTTACGCTCAAGAGCTTCTGCCACTTCCAGAGTCGCGTTTTTGGTACGAACGAAGATAATCGCCGCATCAAAATCTTCCGCTTCCAGGAAACGTACCAGTGCTTCGTTTTTACGCATAccc < 1:902978/138‑1 (MQ=255)
gcggcgCTGTTGTAGCCGTTACGCTCAAGAGCTTCTGCCACTTCCAGAGTCGCGTTTTTGGTACGAACGAAGATAATCGCCGCATCAAAATCTTCCGCTTCCAGGAAACGTACCAGTGCTTCGTTTTTACGCATAccc < 7:153959/138‑1 (MQ=255)
cggcgCTGTTGTAGCCGTTACGCTCAAGAGCTTCTGCCACTTCCAGAGTCGCGGTTTTTGTTCGAAACAATATAATAGCCACAACAAAATAATAAGCATCCACGAAACGATACAGTGCTTCGTGTTTTAGCATAcacc > 2:33891/1‑138 (MQ=255)
cggcgCTGTTGTAGCCGTTACGCTCAAGAGCTTCTGCCACTTCCAGAGTCGCGGTTTTGGGTCGAACGAAGATAATCGCCGCATCAAAAACTTACGCTTCCAGGAAACGTACCAGTGCTTCGTTTTTTAGCATAcccc > 4:323107/1‑138 (MQ=255)
cggcgCTGTTGTAGCCGTTACGCTCAAGAGCTTCTGCCACTT‑CAGAGTCGCGTTTTTGGTACGAACGAAGATAATCGCCGCATCAAAATCTTCCGCTTCCAGGAAACGTACCAGTGCTTCGTTTTTACGCATACCCCa < 7:847924/138‑1 (MQ=255)
ggcgCTGTTGTATCCGTTACGCTCAAGCGCTTCTGACACTTCAAGAGTCGCGTTTTTGGTACGAACGAAGATAATCTCCGCATCAAAATATTCCGCTTCCAGGAAACGTACCAGTGCTTCGTTTTTACGCATACCCCAGa < 6:845138/140‑1 (MQ=255)
ggcgCTGTTGTAGCCGTTACGCTCTAGAGCTTCTGCCACTTCCAGAGTCGCGTTTTTGGTACGAACGAAGATAATCGCCGCATCAAAATCTTCCGCTTCCAGGAAACGTACCAGTGCTTCGTTTTTACGCATACCCCa < 2:331796/138‑1 (MQ=255)
ggcgCTGTTGTAGCCGTTACGCTCAAGAGCTTCTGCCACTTCCAGAGTCGCGTTTTTTGTACGAACGAAGATAATCGCCGCATCAAAATCTTCCGCTTCCAGGAAACGTACCAGTGCTTCGTTTTTACGCATACCCCa < 8:564934/138‑1 (MQ=255)
ggcgCTGTTGTAGCCGTTACGCTCAAGAGCTTCTGCCACTTCCAGAGTCGCGTTTTTGGTAAGAACGAAGATAATCGCCGCATCAAAATCTTCCGCTTCCAGGAAACGTACCAGTGCTTCGTTTTTACGCATACCCCTGa < 5:499832/140‑1 (MQ=255)
ggcgCTGTTGTAGCCGTTACGCTCAAGAGCTTCTGCCACTTCCAGAGTCGCGGTTTTTGTGCGCACGAAAAAAATAGCCGCCACAAAAACTTACGCGTCAAGGAAACGGACCACTGCTTTGTTTTTAAGCCTAACCCAgc > 6:72467/1‑139 (MQ=255)
ggcgCTGTTGTAGCCGTTACGCTAAAGAGCTTCTGCCACTTCAAGAGTCGCGTTTTTGGTACGAACGAAGATAATCGCCGCATCAAAATCTTCCGCTTCCAGGAAACGTACCAGTGCTTCGTTTTTACGCATACCCCAGa < 6:589657/140‑1 (MQ=255)
ggcgCTGTTGTAGCCGGTACGCTCAAGAGCTTCTGCCACTTCCAGAGTCGCGATTTTGGTACGAACTAAGATAATCGCCGCATCAAAATCTTCCGCTTCCAGGAAACGTACCAGTGCTTCGTTTTTACGCATACCCCa < 2:615045/138‑1 (MQ=255)
ggcgCTGTTGGAGCCGTTACGCTCAAGAGCTGCTGCCACTTCCAGAGTCGCGTTTTTGGTACGACCGCAGATAATCGCCGCAGCAAAATCTTCCGCTGCCAGGAAACGTACCAGTGCTTCGTTTTTACGCATACCCCa < 7:350834/138‑1 (MQ=255)
cgcgtttgtAGCCGTTACGCTCAAGAGCTTATGCCAATTCCAGAGTCGCGATTTTGGAACGAACGAAGATAATCGCCGCAGCAAAATCTTCCGCTGCCAGGAAACGTACCAGTGCTTCGTTTTTACGCATACCCCAGACa < 6:92716/135‑1 (MQ=255)
gcTGTTGTAGCCGTTACGCTCAAGAGCTTCTGCCACTTCCAGAGTCGCGTTTTTGGTACGAACGAAGATAATCGCCGCATCAAAATCTTCCGCTTCCAGGAAACGTACCAGTGCTTCGTTTTTACGCATACCCCAGAc < 1:710384/138‑1 (MQ=255)
gcTGTTGTAGCCGTTACGCTCAAGAGCTTCTGCCACTTCCAGAGTCGCGTTTTTGGTACGAACGAAGATAATCGCCGCATCAAAATCTTCCGCTTCCAGGAAACGTACCAGTGCTTCGTTTTTACGCATACCCCAGAc < 3:417046/138‑1 (MQ=255)
gcTGTTGTAGCCGTTACGCTCAAGAGCTTCTGCCACTTCCAGAGTCGCGTTTTTGGGACGAACGAAGATAATCGCCGCATCAAAATCTTCCGCTTCCAGGAAACGTACCAGTGCTTCGTTTTTACGCATACCCCAGAc < 1:845736/138‑1 (MQ=255)
gcTGTTGTAGCCGTTACGCTCAAGAGCTTCTGCCACTTCCAGAGTAGCGTTTTTGGTACGAACGAAGATAATCGCCGCATCAAAATCTTCCGCTTCCAGGAAACGTACCAGTGCTTCGTTTTTACGCATACCCCAGAc < 4:141232/138‑1 (MQ=255)
gcTGTTGTAGCCGTTACGCTCAAGAGCGTCTGCCACTTCCAGAGTCGCGTTTTTGGTACGAACGAAGATAATCGCCGCATCAAAATCTTCCGCTTCCAGGAAACGTACCAGTGCTTCGTTTTTACGCATACCCCAGACAg < 6:515179/140‑1 (MQ=255)
ttgtctccGTTAAGCTCAAGAGCTTCTGCCACTTCCAGAGTCGCGTTTTTGGTACGAACGAAGATAATCGCCGCATCAAAATCTTCCGCTTCCAGGAAACGTACCAGTGCTTCGTTTTTACGCATACCCCAGACAGTCCa < 6:482739/134‑1 (MQ=255)
cctgttcGCTCAAGAGCTTCTGCCACTTCCAGAGTCGCGTTTTTGGTACGAACGAAGATAATCCCCGCATCAAAATCTTCCGCTTCCAGGAATCGTACCAGTGCTTCGTTTTTACGCATACCCAAGACAGTCCAGTAg < 1:761721/132‑1 (MQ=255)
ccGTTACGCTCAAGAGCTTCTGCCACTTCCAGAGTCGCGTTTTTGGTACGAACGAAGATAATCGCCGCATCAAAATCTTCCGCTTCCAGGAAACGTACCAGTGCTTCGTTTTTACGCATACCCCAGACAGTCCAGTAg < 1:228844/138‑1 (MQ=255)
tACGCTCAAGAGCTTCTGCCACTTCCAGAGTCGCGGTTTTTGTTCGGACGAAGATAATAGCCGCCACAAAATCTTACGCGGCCCAGGAACGTAACAGTGGTTCGTTTTTAAGCCAAACCCCGACACGCCAGGAGcgatgg > 6:861554/1‑135 (MQ=255)
aCGCTCAAGAGCTTCTGCCACTTCCAGAGTCGCGTTTTTGGTACGAACGAAGATAATCGCCGCATCAAAATCTTCCGCTTCCAGGAAACGTACCAGTGCTTCGTTTTTACGCATACCCCAGACAGTCCAGTAGCTCTGGc < 5:499742/140‑1 (MQ=255)
cGCTCAAGAGCTTCTGCCACTTCCAGAGTCGCGTTTTTGGTTCGAACGCAGATAATAGCCGCCTCAAAATAGTACGCTTCCAGGCAACGGACCCGTGCTTAGGTTTTAAGCCTACCCCAGACCAGCCAGTAggggtgg > 4:400627/1‑132 (MQ=255)
cGCTCAAGAGCTTCTGCCACTTCCAGAGTCGCGTTTTTGGTACTAACGAAGATAATCGCCGCATCAAAATCTTCCGCTTCCAGGAAACGTACCAGTGCTTCGTTTTTACGCATACCCCAGACAGTCCAGTAGCTCTGGCt < 6:789225/140‑1 (MQ=255)
cGCTCAAGAGCTTCTGCCACTTCCAGAGTCGCGTTTTTGGTACGAACGAAGATAATCGCCGCATCAAAATCTTCCGCTTCCAGGAAACGTACCAGTGCTTCGTTTTTACGCATACCCCAGACAGTCCAGTAGCTCTGGCt < 6:28961/140‑1 (MQ=255)
cGCTCAAGAGCTTCTGCCACTTCCAGAGTCGCGTTTTTGGTACGAACGAAGATAATCGCCGCATCAAAATCTTCCGCTTCCAGGAAACGTACCAGTGCTTCGTTTTTACGCATACCCCAGACAGTCCAGTAGCTCTGGCt < 5:22266/140‑1 (MQ=255)
tCTGACACTTCCAGAGTCGCGTTTTTGGTACGAACGAAGATAATCGCCGCATCAAAATCTTCCGCTTCCAGGAAACGTCCCAGTGCTTCGTTTTTACGCATACCCCAGACAGTCCAGTAGCTCTGGCTGATGTCAGGa < 2:766589/138‑1 (MQ=255)
cACTTCCATAGTCGCGTTTTTGGTACGAACGAAGATAATCGCCGCATCAAAATATTCCGCTTCCAGGAAACGTACCAGTGCTTCGTTTTTACGCATACCCCAGACAGTCCCGTAGCTCTGGGTGATGTAAGGACGGGt > 7:824268/1‑138 (MQ=255)
cACTTCCAGAGTCGCGTTTTTTGTACGAACGAAGATAATCGCCGCATCAAAATCTTCCGCTTCCAGGAAACGTACCTGTGCTTCGTTTTTACGCATACCCCAGACAGTCCAGTAGCTCTGGCTGATGTCAGGACGGGt < 1:935382/138‑1 (MQ=255)
cACTTCCAGAGTCGCGTTTTTGGTACGAACGAAGATAATCGCCGCATCAAAATCTTCCGCTTCCAGGAAACGTACCAGTGCTTCGTTTTTACGCATACCCCAGACAGTCCAGTAGCTCTGGCTGATGTCAGGACGGGt < 1:641091/138‑1 (MQ=255)
cACTTCCAGAGTCGCGTTTTTGGTACGAACGAAGATAATCGCCGCATCAAAATCTTCCGCTTCCAGGAAACGTACCAGTGCTTCGTTTTTACGCATACCCCAGACAGTCCAGTAGCTCTGGCTGATGTCAGGACGGGt < 1:269754/138‑1 (MQ=255)
cACTTCCAGAGTCGCGTGTTTGGTACGAACGAAGATAATCGCCGCATCAAAATCTTCCGCTTCCAGGAAACGTACCAGTGCTTCGTTTTTACGCATACCCCAGACAGTCCAGTAGCTCTGGCTGATGTCAGGACGGGTAg < 6:262497/140‑1 (MQ=255)
cACTTCCAGAGTAGCGGTTTTGGTACGAACGAAGATAATCGCCGCATCAAAATCTTCCGCTTCCAGGAAACGTACCAGTGCTTCGTTTTTACGCATACCCCAGACAGTCCAGTAGCTCTGGCTGATGTCAGGACGGGt < 4:219333/138‑1 (MQ=255)
cACTTCCAGAGGCGCGTTTTTGGTACGAACGAAGATACTCGCCGCCTCAAAATCTTCCGCTTCCAGGAAACGAACCAGTGCTTCGTTTTTACGCATACCCCAGACAGTCCAGTAGCTCTGGCTGATGTCAGGACGGGTAg < 6:796632/140‑1 (MQ=255)
cACTTCAAGAGTCGCGTTTTTGGTACGAACGAAGATAATCGCCGCATCAAAATCTTCCGCTTCCAGGAAACGTACCAGTGCTTCGTTTTTACGCATACCCCAGACAGTCCAGTAGCTCTGGCTGATGTCAGGACGGGt < 2:573007/138‑1 (MQ=255)
cgTTTTTGGTACGAACGAAGATAATCGCCGCAGCAAAATCTTCCGCTTCCAGGAAACGTACCAGTGCTTCGTTTTTACGCATACCCCAGACAGTCCAGTAGCTCTGGCTGATGTCAGGACGGGTAGTCACGCTGGACt < 3:676971/138‑1 (MQ=255)
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CGCAATCAGGATGTCCAGACGACCATCTTTCAGGCGTTCCAGTGTCTGCTCACGCAGCGCCTGGTTCATGTCACCGTTCAGCGCGGCGCTGTTGTAGCCGTTACGCTCAAGAGCTTCTGCCACTTCCAGAGTCGCGTTTTTGGTACGAACGAAGATAATCGCCGCATCAAAATCTTCCGCTTCCAGGAAACGTACCAGTGCTTCGTTTTTACGCATACCCCAGACAGTCCAGTAGCTCTGGCTGATGTCAGGACGGGTAGTCACGCTGGACT > NZ_CP022686/2048953‑2049224
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| Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
N/A
