Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A29 F36 I0 R1
|
179 |
9550.8 |
8038540 |
98.3% |
7901884 |
136.2 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
freq |
annotation |
gene |
description |
| RA |
NZ_CP022686 |
2,049,089 |
T→G |
20.6% |
N256T (AAC→ACC) |
deaD ← |
ATP‑dependent RNA helicase DeaD |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NZ_CP022686 | 2,049,089 | 0 | T | G | 20.6%
| 237.6
/ 32.5
| 154 | N256T (AAC→ACC) | deaD | ATP‑dependent RNA helicase DeaD |
| Reads supporting (aligned to +/- strand): ref base T (10/110); new base G (32/2); total (42/112) |
| Fisher's exact test for biased strand distribution p-value = 5.88e-22 |
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 |
Only 100 of 154 total aligned reads displayed.
ATCAGGATGTCCAGACGACCATCTTTCAGGCGTTCCAGTGTCTGCTCACGCAGCGCCTGGTTCATGTCACCGTTCAGCGCGGCGCTGTTGTAGCCGTTACGCTCAAGAGCTTCTGCCACTTCCAGAGTCGCGTTTTTGGTACGAACGAAGATAATCGCCGCATCAAAATCTTCCGCTTCCAGGAAACGTACCAGTGCTTCGTTTTTACGCATACCCCAGACAGTCCAGTAGCTCTGGCTGATGTCAGGACGGGTAGTCACGCTGGACTGA > NZ_CP022686/2048957‑2049226
|
tCAGGATGTCCAGACGACCATCTTTCCGGCGTTACAGTGTCTGCTCACGCAGCGCCTGGTTCATGTCACCGTTCAGCGCGGCGCTGTTGTAGCCGTTACGCTCAAGAGCTTCTGCCACTTCCAGAGTCGCGTTTTTGGTa < 6:44104/140‑1 (MQ=255)
gATGTCCAGACGACCATCTTTCAGGCGTTCCAGTGTCTGCTCACGCAGCGCCTGGTTCATGTCACCGTTCAGCGCGGCGCTGTTGTAGCCGTTACGCTCAAGAGCTTCTGCCACTTCCAGAGTCGCGTTTTTGGTacgaa < 7:213650/140‑1 (MQ=255)
gATGTCCAGACGACCATCTTTCAGGCGTTCCAGTGTCTGCTCAAGCAGCGCCTGGTTAATGTAACCGTTCAGATCGGACCTTTTGTAGCCGTTACTCTCAAGAGCTTCTGCAACTTCAAGAGTCGCGTTTTTgtgaataa > 7:557036/1‑133 (MQ=255)
tGTCCAGACGACCATCTTTCAGGCGTTCCAGTGTCTTCTCACGCAGCGCCTGGTTCATGTCACCGTTCAGCGCGGCGCTGTTGTAGCCGTTACGCTCAAGAGCTTCTGCCACTTCCAGAGTCGCGTTTTTGGTacgaacg < 1:136706/140‑1 (MQ=255)
tCCAGACGACCATCTTTCAGGCGTTCCAGTGTCTGCTCACGCAGCGCCTGGTTCATGTCACCGTTCAGCGCGGCGCTGTTGTAGCCGTTACGCTCAAGCGCTTCTGCCACTTCCAGAGTCGCGGTTTTTGTgcgaacggc > 7:388510/1‑138 (MQ=255)
tCCAGACGACCATCTTTCAGGCGTTCCAGTGTCTGCTCACGCAGCGCCTGGTTCATGTCACCGTTCAGCGCGGCGCTGTTGTAGCCGTTACGCTCAAGAGCTTCTGCCACTTCCAGAGTCGCGGTTTTTGTAcgaaccaa > 4:49572/1‑140 (MQ=255)
tCCAGACGACCATCTTTCAGGCGTTCCAGTGTCTGCTCACGCAGCGCCTGGTTCATGTCACCGTTCAGCGCGGCGCTGTTGTAGCCGTTACGCTCAAGAGCTTCTGCCACTTCCAGAGTCGCGGGTTTTGTtcgaaacaa > 4:848154/1‑136 (MQ=255)
gacgacCATCTTTCAGGCGTTCCAGTGTCTGCTCACGCAGCGCCTGGTTCATGTCACCGTTCAGCGCGGCGCTGTTGTAGCCGTTACGCTCAAGAGCTTCTGCCACTTCCAGAGTCGCGGTGTTTGTAGGAACGCACATa > 5:984976/1‑140 (MQ=255)
ccATCTTTCAGGCGTTCCAGTGTCTGCTCACGCAGCGCCTGGTTCATGTCACCGTTCAGCGCGGCGCTGTTGTAGCCGTTACGCTCAAGAGCTTCTGCCACTTCCAGAGTCGCGTTTTTGGTACGAACGAAGATAATcgc < 5:509553/140‑1 (MQ=255)
cATCTTTCAGGCGTTCCAGTGTCTGCTCACGCAGCGCCTGGTTCATGTCACCGTTCAGCGCGGCGCTGTTGTAGCCGTTACGCTCAAGAGCTTCTGCCACTTCCAGAGTCGCGTTTTTGGTAAGAACGAAGATAATagcc > 4:868693/1‑140 (MQ=255)
cATCTTTCAGGCGTTCCAGTGTCTGCTCACGCAGCGCCTGGTTCATGTCACCGTTCAGCGCGGCGCTGTTGTAGCCGTTACGCTCAAGAGCTTCTGCCACTTCCAGAGTCGCGGTTTTTGTTCGGACGAATCTAATagcc > 2:287220/1‑140 (MQ=255)
cATCTTTCAGGCGTTCCAGTGTCTGCTCACGCAGCGCCTGGTTCATGTCACCGTTCAGCGCGGCGCTGTTGTAGCCGTTACGCTCAAGAGCTTCTGCCACTTCCAGAGTCGCGGTTTTTGGAGGCACGCATATAATagcc > 2:178263/1‑140 (MQ=255)
ttCCAGTGTCTTCTCTCGCAGCGCCTGGTTCATGTCACCGTTCAGTGCGGCGCTGTTGTAGCCGTTACGCTCAAGAGCTTCTGCAACTTCCAGAGTCGAGTTTTTGGTACGAACGAAGATAATCGCCGCATCAAAATCtt < 5:13198/140‑1 (MQ=255)
ttCCAGTGTCTGCTCACGCAGCGCCTGGTTCATGTCACCGTTCAGCGCGGCGCTGTTGTAGCCGTTACGCTCAAGAGCTTCTGCCACTTCCAGAGTCGCGGTTTTTGTTCGTACGAAGATAATAGCCGCAGCaaaaacat > 3:206884/1‑136 (MQ=255)
ttCCAGTGTCTGCTCACGCAGCGCCTGGTTCATGTCACCGTTCAGCGCGGCGCTGTTGTAGCCGTTACGCTCAAGAGCTTCTGCCACTTCCAGAGTCGCGGTTTTTGTTCGAACGAAGATAATAGCCGCAAGAAAAtata > 4:726300/1‑137 (MQ=255)
ttCCAGTGTCTGCTCACGCAGCGCCTGGTTCATGTCACCGTTCAGCGCGGCGCTGTTGTAGCCGTTACGCTCAAGAGCTTCTGCCACTTCCAGAGTCGCGGTTTTTGTTAGAACGCAGATAATAGCCGCAGCCAAAACtt > 4:337467/1‑140 (MQ=255)
ttCCAGTGTCTGCTCACGCAGCGCCTGGTTCATGTCACCGTTCAGCGCGGCGCTGTTGTAGCCGTTACGCTCAAGAGCTTCTGCCACTTCCAGAGTCGCGGTTTTGGGTGGTACGCAGATAAAAGCCGCCACAAAATAtt > 1:262103/1‑140 (MQ=255)
tCCTGTGTCTTCTCACGCAGCGACTGGTTGATGTCACCGTTCTGCGCGTCGCTGTTGTAGCCGTTACGCTCTAGAGCTTCTGACTCTTCCAGAGTCGCGTTTTTGGTACGAACTAAGATAATCGCCGCATCAAAATCTTc < 7:645821/140‑1 (MQ=255)
ccAGTGTCTGCTCACGCAGCGCCTGGTTCATGTCACCGTTCAGCGCGGCGCTGTTGTAGCCGTTACGCTCAAGAGCTTCTGCCACTTCCAGAGTCGCGGGTTTGTTACGAACGAAGCTAATAGCCCCCTAAAAAACtagc > 7:892841/1‑137 (MQ=255)
tgtgtCTGCTCACGCAGCGCCTGGTTCATGTCACCGTTCAGCGCGGCGCTGTTGTAGCCGTTACGCTCAAGAGCTTCTGCCACTTCCAGAGTCGCGTTTTTGGTACGAACGAAGATAATCGCCGCATCAAAATCTTCCGc < 3:811026/139‑1 (MQ=255)
gtgtCTGCTCACGCAGCGCCTGGTTCATGTCACCGTTCAGCGCGGCGCTGTTGTAGCCGTTACGCTCAAGAGCTTCTGCCACTTCCAGAGTCGCGTTTTTGGTACGAACGAAGATAATCGCCGCATCAAAATCTTCCGCt < 3:973943/140‑1 (MQ=255)
cTGCTCACGCAGCGCCTGGTTCATGTCACCGTTCAGCGCGGCGCTGTTGTAGCCGTTACGCTCAAGAGCTTCTGCCACTTCCAGAGTCGCGTTTTTGGTACGAACGAAGATAATCGCCGCATCAAAATCTTCCGCTTCCa < 6:990976/140‑1 (MQ=255)
gagcACGCATCGCCTGTTTCATGGCACCGTTCAGCGCTGCGCTGTTGTAGCAGTTACTCTCAAGAGATTCTGCCACTTCCAGACTCGCGTTTTTGGTACGAACGAAGATAATCGCCTAATCAAAATCTTCCGCTTCCAgg < 3:895795/137‑1 (MQ=255)
cACGCAGCGCCTGGTTCATGTCTCCGTTCAGCGCGGCGCTGTTGTAGCCGTTACGCTCAAGAGCTTCTGCCACTTCCAGAGTCGCGTTTTTGGTACGAACGAAGATAATCGCCGCATCAAAATCTTCCGCTTCCAGGaaa < 5:80593/140‑1 (MQ=255)
cACGCAGCGCCTGGTTCATGTCTCCGTTCAGCGCGGCGCTGTTGTAGCCGTTACGCTCAAGAGCTTCTGCCACTTCCAGAGTCGCGTTTTTGGTACGAACGAAGATAATCGCCGCATCAAAATCTTCCGCTTCCAGGaaa < 3:607722/140‑1 (MQ=255)
cACGCAGCGCCTGGTTCATGTCACCGTTCAGCGCGGCGCTGTTGTAGCCGTTACGCTCAAGAGCTTCTGCCACTTCCAGAGTCGCGTTTTTGGTACGAACGAAGATAATCGCCGCATCAAAATCTTCCGCTTCCAGGaaa < 6:596733/140‑1 (MQ=255)
cAGCGCCTGGTTCATGTCACCGTTCAGCGCGGCGCTGTTGTAGCCGTTACGCTCAAGAGCTTCTGCCACTTCCAGAGTCGCGGTTTTGGTTGGGAAGAAGATAATCGGCGCAGCAAAAACATCAGCGTGCAGGGAACCTa > 2:713238/1‑140 (MQ=255)
gcCTGGTTCATGTCACCGTTCAGCGCGGCGCTGTTGTAGCCGTTACGCTCAAGAGCTTCTGCCACTTCCAGAGTCGCGGTTTTTGTTAGAACGAAGATAATACCCGGCTCAAAAAATTACCCGTGCAGGCAACGtcacac > 4:29562/1‑135 (MQ=255)
gcCTGGTTCATGTCACCGTTCAGCGCGGCGCTGTTGTAGCCGTTACGCTCAAGAGCTTCTGCCACTTCCAGAGTCGCGGTTTTGGTTACAACCAAAATAAAAGCCCGAACAAAAAATTGCGCTTGCGGGCAACGTACCac > 2:234445/1‑139 (MQ=255)
gTTCATGTCACCGTTCAGCGCGGCGCTTTTGTAGCCGTTACGCTCAAGAGCTTCTGCCACTTCCAGAGTCGCGGTTTTGGAACGAACGAAGATATTCGCCGCATCAAAATCTTCCGCTTCCAGGAAACGTACCAGTGCtt < 8:924912/140‑1 (MQ=255)
aTGTCACCGTTCAGCGCGGCGCTGTTGTAGCCGTTACGCTCAAGAGCTTCTGCCACTTCCAGAGTCGCGTTTTTGGTACGAACGAAGATAATAGCCGCATCAAAATATTCAGCTTCCAGGAAACCTAACAGTGCTTCGtt > 5:253820/1‑140 (MQ=255)
gTCACCGTTCAGCGCGGCGCTGTTGTAGCCGTTACGCTCAAGAGCTTCTGCCACTTCCAGAGTCGCGTTTTTGGTACGAACGAAGATAATCGCCGCATCAAAATCTTCCGCTTCCAGGAAACGTACCAGTGCTTCGtttt < 2:664490/140‑1 (MQ=255)
gTCACCGTTCAGCGCGGCGCTGTTGTAGCCGTTACGCTCAAGAGCTTCTGCCACTTCCAGAGTCGCGTTTTTGGTAAGAACGCAGATAATCGCCGCAACAAAAACATACCCGTCCAGGAAACGTACCAAGGCTTCGtttt > 1:55579/1‑140 (MQ=255)
tCACCGTTCAGCGCGGCGCTGTTGTAGCCGTTACGCTCAAGAGCTTCTGCCACTTCCAGAGTCGCGGTTTTTGTAAGAACGAAGATAATCGCCGCAAAAAAAAATTACGCTTACAGGAAACCTACCACTGGTTCGgtttt > 2:539264/1‑140 (MQ=255)
cggtCAGCGCGGCGCTGTTGTAGCCGTTACGCTCAAGAGCTTCTGCCACTTCCAGAGTCGCGTTTTTGGTACGAACGAAGATAATCGCCGCATCAAAATCTTCCGCTTCCAGGAAACGTACCAGGGCTTCGTTTTTACGc < 6:508914/137‑1 (MQ=255)
cgggcAGCGCGGCGCTGGTGTAGCCGTTACGCTCAAGAGCTTCTGCCACTTCCAGAGTCGCGTTTTTGGTACGAACGAAGATAATCGCCGCATCAAAATCTTCCGCTTCCAGGAAACGTACCAGTGCTTCGTTTTTACGc < 8:102177/136‑1 (MQ=255)
cgatCAGCGCGGCGCTTTTGTAGCCTTTACGCTCAAGAGCTTCAGCCACTTCCAGAGTCGCGTTTTTTGTACGAACTAAGATAATCGCCGAATCAAAATCTTACGCTTCCAGGAAACGTACCAGTGCTTCGTTTTTACGc < 5:636124/137‑1 (MQ=255)
cGTTCTGCGCGGCGCTGTTGGAGCCGTTTCGCTCAAGAGCTTCTGCCACTTCCAGAGTCGCGTTTTTGGGACGAACGAAGATAATCGCAGCATCAAAATCTTCCGCTTCCAGGAAACGTACCAGTGCTTCGTTTTTACGc < 8:235280/140‑1 (MQ=255)
cGTTCTGCGCGGCGCTGGTGTAGCCGGTACGCTCAAGAGCGTCTGCCCCTTCCAGAGTCGCGTTTTTGGTACGAACGAAGATAATCGCCGCATCAAAATCTTCCGCTTCCAGGAAACGGACCAGTGCTTCGTTTTTACGc < 8:335650/140‑1 (MQ=255)
cGTTCAGGGCGGCGCGGTTGTAGCCGTTACGCTCAAGAGCTTCTGCCACTTCCAGAGTCGCGTTTTTGGTACGAACGAAGATAATCGCCGCATCAAAATCTTCCGCTTCCAGGAAACGTACCAGTGCTTCGTTTTTACGc < 1:112440/140‑1 (MQ=255)
cGTTCAGCGCGGCGCTGTTGTATCCGTTACGCTCAAGAGCTTCTGCCACTTCCAGAGTCGCGTTTTTGGTACGAACGAAGATAATCGCCGCATCAAAATCTTCCGCTTCCAGGAAACGTACCAGTGCTTCGTTTTTACGc < 4:621824/140‑1 (MQ=255)
cGTTCAGCGCGGCGCTGTTGTAGCCGTTACGCTCAAGAGCTTCTGCCACTTCCAGAGTCGCGTTTTTGGTACGAACGAAGATAATCGCCGCATCAAAATCTTCCGCTTCCAGGAAACGTACCAGTGCTTCGTTTTTACGc < 4:328020/140‑1 (MQ=255)
cGTTCAGCGCGGCGCTGTTGTAGCCGTTACGCTCAAGAGCTTCTGCCACTTCCAGAGTCGCGTTTTTGGTACGAACGAAGATAATCGCCGCATCAAAATCTTCCGCTTCCAGGAAACGTACCAGTGCTTCGTTTTTACGc < 2:224533/140‑1 (MQ=255)
cGTTCAGCGCGGCGCTGTTGTAGCCGTTACGCTCAAGAGCTTCTGCCACTTCCAGAGTCGCGTTTTTGGTACGAACGAAGATAATCGCCGCATCAAAATCTTCCGCTTCCAGGAAACGTACCAGTGCTTCGTTTTTACGc < 5:754333/140‑1 (MQ=255)
cGTTCAGCGCGGCGCTGTTGTAGCCGTTACGCTCAAGAGCTTCTGCCACTTCCAGAGTCGCGTTTTTGGTACGAACGAAGATAATCGCCGCATCAAAATCTTCCGCTTCCAGGAAACGTACCAGTGCTTCGTTTTTACGc < 6:603896/140‑1 (MQ=255)
cGTTCAGCGCGGCGCTGTTGTAGCCGTTACGCTCAAGAGCTTCTGCCACTTCCAGAGTCGCGTTTTTGGTACGAACGAAGATAATCGCCGCATCAAAATCTTCCGCTTCCAGGAAACGTACCAGTGCTTCGTTTTTACGc < 1:880007/140‑1 (MQ=255)
cGTTCAGCGCGGCGCTGTTGTAGCCGTTACGCTCAAGAGCTTCTGCCACTTCCAGAGTCGCGTTTTTGGTACGAACGAAGATAATCGCCGCATCAAAATCTTCCGCTTCCAGGAAACGTACCAGTGCTTCGTTTTTACGc < 1:318023/140‑1 (MQ=255)
cGTTCAGCGCGGCGCTGTTGTAGCCGTTACGCTCAAGAGCTTCTGCCACTTCCAGAGTCGCGTTTTTGGTACGAACGAAGATAATCGCCGCATCAAAATCTTCCGCTTCCAGGAAACGTACCAGTGCTTCGTTTTTACGc < 3:553453/140‑1 (MQ=255)
cGTTCAGCGCGGCGCTGTTGTAGCCGTTACGCTCAAGAGCTTCTGCCACTTCCAGAGTCGCGTTTTTGGTACGAACGAAGATAATCGCCGCATCAAAATCTTCCGCTTCCAGGAAACGTACCAGTGCTTCGTTTTTACGc < 3:552386/140‑1 (MQ=255)
cGTTCAGCGCGGCGCTGTTGTAGCCGTTACGCTCAAGAGCTTCTGCCACTTCCAGAGTCGCGTTTTTGGTACGAACGAAGATAATCGCCGCATCAAAATCTTCCGCTTCCAGGAAACGTACCAGTGCTTCGTTTTTACGc < 2:945377/140‑1 (MQ=255)
cGTTCAGCGCGGCGCTGTTGTAGCCGTTACGCTCAAGAGCTTCTGCCACTTCCAGAGTCGCGTTTTTGGTACGAACGAAGATAATCGCCGCATCAAAATCTTCCGCTTCCAGGAAACGTACCAGTGCTTCGTTTTTACGc < 3:732374/140‑1 (MQ=255)
cGTTCAGCGCGGCGCTGTTGTAGCCGTTACGCTCAAGAGCTTCTGCCACTTCCAGAGTCGCGTTTTTGGTACGAACGAAGATAATCGCCGCATCAAAATCTTCCGCTTCCAGGAAACGTACCAGTGCTTCGTTTTTACGc < 3:756604/140‑1 (MQ=255)
cGTTCAGCGCGGCGCTGTTGTAGCCGTTACGCTCAAGAGCTTCTGCCACTTCCAGAGTCGCGTTTTTGGTACGAACGAAGATAATCGCCGCATCAAAATCTTCCGCTTCCAGGAAACGTACCAGTGCTTCGTTTTTACGc < 2:989535/140‑1 (MQ=255)
cGTTCAGCGCGGCGCTGTTGTAGCCGTTACGCTCAAGAGCTTCTGCCACTTCCAGAGTCGAGTTTTTGGTACGAACGAAGATAATCGCCGCATCAAAATCTTCCGCTTCCAGGAAACGTACCAGTGCTTCGTTTTTACGc < 3:151691/140‑1 (MQ=255)
cGTTCAGCGCGGCGCTGTTGTAGCCGTTACGCTCAAGAGCTTCTGCCACTTCCAGAGGCGCGTTTTTGGTACGAACGAAGATAATCGCCGCATCAAAATCTTCCGCTTCCAGGAAACGTACCAGTGCTTCGTTTTTACGc < 6:866749/140‑1 (MQ=255)
cGTTCAGCGCGGCGCTGTTGTAGCCGTTACGCTCAAGAGCTGGTGCCACTTCCAGAGGCGCGTTTTTGGTACGAACGAAGATAATCGCCGCATCAAAATCTTCCGCTTCCAGGAAACGTACCAGTGCTTCGTTTTTACGc < 5:87816/140‑1 (MQ=255)
cGTGCAGCGCGGCGCTGTTGTAGCCGTTACGCTCAAGAGCTTCTGCCACTTCCAGAGTCGCGTTTTTGGTACGAACGAAGATAATCGCCGCATCAAAATCTTCCGCTTCCAGGAAACGTACCAGTGCTTCGTTTTTACGc < 2:895172/140‑1 (MQ=255)
cgcgcGGCGCTGTTGTAGCCGTTACGCTCAAGAGCTTCTGCCACTTCCAGAGTCGCGTTTTTGGTACGAACGAAGATAATCGCCGCATCAAAATCTTCCGCTTCCAGGAAACGTACCAGTGCTTCGTTTTTACGCATAcc < 2:847540/139‑1 (MQ=255)
cgcgGCGCTGTTGTAGCCGTTACGCTCAAGAGCTTCTGCCACTTCCAGAGTCGCGTTTTTTGGTCGAAAGAAGATAATACCCGCGACAAAAAATTTCGCTTGCAGGAAACCTACAAGAGGTTCGTTTTTTAGCATAaccc > 2:1018691/1‑140 (MQ=255)
gcggcgCTGTTGTAGCCGTTACGCTCAAGAGCTTCTGCCACTTCCAGAGTCGCGTTTTTGGTACGAACGAAGATAATCGCCGCATCAAAATCTTCCGCTTCCAGGAAACGTACCAGTGCTTCGTTTTTACGCATACCCCa < 1:968847/140‑1 (MQ=255)
gtcgcTGTTGTAGCCGTTACGCTCAAGAGCTTCTGCCACTTCCAGAGTCGCGTTTTTGGTACGAACGAAGATAATCGCCGCATCAAAATCTTCCGCTTCCAGGAAACGTACCAGTGCTTCGTTTTTACGCATACCCCAGa < 1:968291/138‑1 (MQ=255)
ggcgCTGTTGTAGCCGTTACGCTCAAGAGCTTCTGCCACTTCCAGAGTCGCGTTTTTGGTACGAACGAAGATAATCGCCGCATCAAAATCTTCCGCTTCCAGGAAACGTACCAGTGCTTCGTTTTTACGCATACCCCAGa < 4:898134/140‑1 (MQ=255)
ggcgCTGTTGTAGCCGTTACGCTCAAGAGCTTCTGCCACTTCCAGAGTCGCGTTTTTGGTACGAACGAAGATAATCGCCGCATCAAAATCTTCCGCTTCCAGGAAACGTACCAGTGCTTCGTTTTTACGCATACCCCAGa < 8:409828/140‑1 (MQ=255)
ggcgCTGTTGTAGCCGTTACGCTCAAGAGCTTCTGCCACTTCCAGAGTCGCGTTTTTGGTACGAACGAAGATAATCGCCGCATCAAAATCTTCCGCTTCCAGGAAACGTACCAGTGCTTCGTTTTTACGCATACCCCAGa < 1:547365/140‑1 (MQ=255)
ggcgCTGTTGTAGCCGTTACGCTCAAGAGCTTCTGCCACTTCCAGAGTCGCGTTTTTGGTACGAACGAAGATAATCGCCGCATCAAAATCTTCCGCTTCCAGGAAACGTACCAGTGCTTCGTTTTTACGCATACCCCAGa < 3:559838/140‑1 (MQ=255)
ggcgCTGTTGTAGCCGTTACGCTCAAGAGCTTCTGCCACTTCCAGAGTCGCGTTTTTGGTACGAACGAAGATAATCGCCGCATCAAAATCTTCCGCTTCCAGGAAACGTACCAGTGCTTCGTTTTTACGCATACCCCAGa < 1:90778/140‑1 (MQ=255)
ggcgCTGTTGTAGCCGTTACGCTCAAGAGCTTCTGCCACTTCCAGAGTCGCGTTTTTGGTACGAACGAAGATAATCGCCGCATCAAAATCTTCCGCTTCCAGGAAACGTACCAGTGCTTCGTTTTTACGCATACCCCAGa < 4:631502/140‑1 (MQ=255)
ggcgCTGTTGTAGCCGTTACGCTCAAGAGCTTCTGCCACTTCCAGAGTCGCGTTTTTGGTACGAACGAAGATAATCGCCGCATCAAAATCTTCCGCTTCCAGGAAACGTACCAGTGCTTCGTTTTTACGCATACCCCAGa < 2:41305/140‑1 (MQ=255)
ggcgCTGTTGTAGCCGTTACGCTCAAGAGCTTCTGCCACTTCCAGAGTCGCGTTTTTGGTACGAACGAAGATAATCGCCGCATCAAAATCTTACGCTTCCAGGAAACGTACCAGTGCTTCGTTTTTACGCATACCCCAGa < 1:351480/140‑1 (MQ=255)
ggcgCTGTTGTAGCAGTTACGCTCAAGCGCTTCTGCCACTTCCAGAGTCGCGTTTTTGGTACGAACGAAGATAATCGCCGCATCAAAATCTTCCGCTTCCAGGAAACGTACCAGTGCTTCGTTTTTACGCATACCCCAGa < 6:684982/140‑1 (MQ=255)
ttgtATCCTTTAAGATCAAGAGCTTCTGCAACTTCCAGAGTCTCGTTTTTGGTACGAACGAAGATAATCGCAGCATCAAAATCTTCCGCTTCCAGGAAACGTACCAGTGATTCGTTTTTACGCATACCCCAGACAGTCCa < 5:340060/140‑1 (MQ=255)
ttgtAGCCGTTACGCTCAAGAGCTTCTGCCACTTCCAGAGTCGCGGTTTTTGTTGGAACGAAGATAATAGCCGCCTCAAAAAATTACGCTTACACGAAAAGGACCAGTGCTTGGTTTTTTCGCATACCCCAGCCAGGccc > 2:547365/1‑139 (MQ=255)
tgtAGCCGTTACGCTCAAGAGCTTCTCCCACTTCCAGAGTAGAGTTTTTGGTACGAACGAAGATAATCGCCGCATCAAAATATTCCGCTTCCAGGAAACGTACCAGTGCTTCGTTTTTACGCATACCCCAGACAGTACAg < 6:245996/140‑1 (MQ=255)
gCCGTTACGCTCAAGAGCTTCTGCCACTTCCAGAGTCGCGTTTTTGGTACGAACGAAGTTAATCGCCGCATCAATATCTTCCGCTTCCATGATACGTAGCAGTGCTTCGTTTTTACTCATACCCCAGACAGTCGAGTAGc < 5:616688/140‑1 (MQ=255)
gCCGTTACGCTCAAGAGCTTCTGCCACTTCCAGAGTCGCGGTTTTTGGAGGCACGCAGATAATAGCCGCAACAAAATAATACGGGTCCAGGGAACCTACCAGTGGGGAGGTTTTAAGCCTACCCCAGCCAGTCCAGTAGc > 2:698247/1‑140 (MQ=255)
tACGCTCAAGAGCTTCTGCCACTTCCAGAGTCGCGGTTTTTGTTGGAACGCAGCTAATAGCCGCATAAAAATCTTACGCGTGCAGGAAAAGTACCAGTGGGTCGTTTTTAAGCATAACCCCGACAGTACAGTAGcggtgg > 6:18806/1‑135 (MQ=255)
tACGCTCAAGAGCTTCTGCCACTTCCAGAGTCGCGGTTTTGGTTCGCACGAAGATTATCGCCGCAACAAAATCTTCCGCTTCCAGGAAACGTAACAGGGGTTAGTTTTTACGCATAACCCCGCCACTCCAGTAggaaggg > 8:266257/1‑134 (MQ=255)
tACGCTCAAGAGCTTCTGCCACTTCCAGAGTCGCGGTTTTGGTAAGAACGAAGATAATCGCCGCATCAAAAAAATACGCGTCCAGGAAACGGACCAGTGCGTCGTTTTTACGCCTACCCCAGACAGTCCCTTAGCTCTgg > 2:730183/1‑140 (MQ=255)
aCGCTCAAGAGCTTCTGCCACTTCCAGAGTCGCGTTTTTGGTACGAACGAAGATAATCGCCGCATCAAAATCTTCCGCTTCCAGGAAACGTACCAGTGCTTCGTTTTTACGCATACCCCAGACAGTCCAGTAGCTCTGGc < 3:49572/140‑1 (MQ=255)
ctcTCAAGAGCTTCTGCCACTTCCAGATTCGAGTTTTTGGTACGAACGAAGATAATCGCCGCATCAAAATCTTCCGCTTCCAGGAAACGTACCAGTGCTGCGTTTTTACGCATACCCCAGACTGTCCAGTAGCTCTGGCt < 6:721160/138‑1 (MQ=255)
cGCTCAAGAGCTTCTGCCACTTCCAGAGTCGCGTTTTTGGTACGAACGCAGATAATCGCCGCATCAAAATCTTCCGCTTCCAGGAAACGTACCAGTGCTGCGTTTTTACGCATACCCCAGACAGTCCAGTAGCTCTGGCt < 2:882090/140‑1 (MQ=255)
cGCTCAAGAGCTTCTGCCACTTCCAGAGTCGCGTTTTTGGTACGAACGAAGATAATCGCCGCATCAAAATCTTCCGCTTCCTGGAAACGTACCAGTGCTTCGTTTTTACGCATACCCCAGACAGTCCAGTAGCGCTGGCt < 5:33366/140‑1 (MQ=255)
cGCTCAAGAGCTTCTGCCACTTCCAGAGTCGCGTTTTTGGTACGAACGAAGATAATCGCCGCATCAAAATCTTCCGCTTCCAGGAAACGTACCAGTGCTTCGTTTTTACGCATACCCCAGACAGTCCAGTAGCTCTGGCt < 6:199008/140‑1 (MQ=255)
cGCTCAAGAGCTTCTGCCACTTCCAGAGTCGCGTTTTTGGTACGAACGAAGATAATCGCCGCATCAAAATCTTCCGCTTCCAGGAAACGTACCAGTGCTTCGTTTTTACGCATACCCCAGACAGTCCAGTAGCTCTGGCt < 2:496241/140‑1 (MQ=255)
cGCTCAAGAGCTGCTGCCACTTCCAGAGTCGCGTTTTTGGTACGAACGAAGATAATCGCCGCATCAAAATCTTCCTCTTCCAGGAAACGTACCAGTGCTTCGTTTTTACGCATACCCCAGACAGTCCAGTAGCTCTGGCt < 8:342693/140‑1 (MQ=255)
gCTTCTGCCACTTCCAGAGTCGCGTTTTTGGTACGAACGAAGATAATCGCCGCATCAAAATCTTCCGCTTCCAGGAAACGTACCAGTGCTTCGTTTTTACGCATACCCCAGACAGTCCTGTAGCTCTGGCTGATGTCAgg < 3:1691/140‑1 (MQ=255)
gCTTCTGCCACTTCCAGAGTCGCGTTTTTGGTACGAACGAAGATAATCGCCGCATCAAAATCTTCCGCTTCCAGGAAACGTACCAGTGCTTCGTTTTTACGCATACCCCAGACAGTCCAGTAGCTCTGGCTGATGTCAgg < 4:237976/140‑1 (MQ=255)
cTTCTGCCACTTCCAGAGTCGCGTTTTTGGTACGAACGAAGATAATCGCCGCATCAAAATCTTCCGCTTCCAGGAAACGTACCAGTGCTTCGTTTTTACGCATACCCCAGACAGTCCAGTAGCTCTGGCTGATGTCAGGa < 1:461258/140‑1 (MQ=255)
gCCACTTCCAGAGTCGCGGTTTTGGGAAGAACGAAGATAATCGCCGCCTCAAAATCTTGCGCGTACAGGAAAACTACCAGTGGTTCGTTTTTTATCCGACCCACGACAGGACAGTAGCGCTGGCTGATTTCAAGACAGGt > 4:580810/1‑140 (MQ=255)
cACTTCCAGATTCGCGTTTTTGGTACGAACGAAGATTATCGCCGCATCAATATCTTCCGCTTCCTGGAAACGTACCAGTGCTTCGTTTTTACGCATACCCCAGACAGTCCAGTAGCTCTGGCTGATGTCAGGACGGGTAg < 3:937854/140‑1 (MQ=255)
cACTTCCAGAGTCGCGTTTTTGGTACGAACGAAGATAATCGCCGCATCAAAATCTTCCGCTTCCAGGAAACGTACCAGTGCTTCGTTTTTACGCATACCCCAGACAGTCCAGTAGCTCTGGCTGATGTCAGGACGGGTAg < 6:862566/140‑1 (MQ=255)
cACTTCCAGAGTCGCGTTTTTGGTACGAACGAAGATAATCGCCGCATCAAAATCTTCCGCTTCCAGGAAACGTACCAGTGCTTCGTTTTTACGCATACCCCAGACAGTCCAGTAGCTCTGGCTGATGTCAGGACGGGTAg < 4:995993/140‑1 (MQ=255)
cACCTCCAGAGTCGCGTTTTTGGTACGAACGAAGATAATCGCCGCATCAAAATCTTCCGCTTCCAGGAAACGTACCAGTGCTTCGTTTTTACGCATACCCCAGACAGTCCAGTAGCTCTGGCTGATGTCAGGACGGGTAg < 7:271479/140‑1 (MQ=255)
aaCTTCCAGAGTAGCGTTTTTGGTACGAACGAAGATAGGCGCCGCATCAAAATCTTCCGCTTCCAGGAAACGTACCAGTGCTTCGTTTTTACGCATACCCCAGACAGTCCAGTAGCTCTGGCTGATGGCAGGACGGGTAg < 8:680119/139‑1 (MQ=255)
ccAGAGTCGCGTTTTTGGTCCGAACGAATATACTAGCCGCATCAAAATCTTCCGCTTCCAGGAAACCTACCAGTGCTTCGTTTTTACGCATACCCCAGACAGTCCAGTATCTCTGGCTGATGTCAGGACTGGTAGTCACg < 3:774307/140‑1 (MQ=255)
ccAGAGTCGCGTTTTTGGTACGAACGAAGATAATCGCCGCATCAAAATCTTCCGCTTCCAGGAAACGTACCAGTGCTTCGTTTTTACGCATACCCCAGACAGTCCAGTAGCTCTGGCTGATGTCAGGACGGGTAGTCACg < 3:339137/140‑1 (MQ=255)
ccAGAGTCGCGGTTTTGGTACGAACGAAGATAATCGCCGCATCAAAATCTTCCGCTTCCAGGAAACGTACCAGTGCTTCGTTTTTACGCATACCCCAGACAGTCCAGTAGCTCTGGCTGATGTCAGGACGGGTAGTCACg < 3:602201/140‑1 (MQ=255)
tCGCGTTTTTGGTACGAACGAAGATAATCGCCGCATCAAAATCTTCCGCTTCCAGGAAACGTACCAGTGCTTCGTTTTTACGCATACCCCAGACAGTCCTGTAGCTCTGGCTGATGTCAGGACGGGTAGTCACGCTGGAc < 3:431605/140‑1 (MQ=255)
gcgcgTTTTTGGTACGAACTAAGATAATCGCCGCATCAAAATCTTCCGCTTCCAGGAAACGTACCAGTGCTTCGTTTTTACGCATACCCCAGACAGTCCAGTAGCTCTGGCTGATGTCAGGACGGGTAGTCACGCTGGAc < 5:544800/139‑1 (MQ=255)
cgTTTTTGGTACGAACGAAGATAATCGCCGCATCAAAATCTTCCGCTTCCAGGAAACGTACCAGTGCTTCGTTTTTACGCATACCCCAGACAGTCCAGTAGCTCTGGCTGATGTCAGGACGGGTAGTCACGCTGGACTGa < 6:950069/140‑1 (MQ=255)
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ATCAGGATGTCCAGACGACCATCTTTCAGGCGTTCCAGTGTCTGCTCACGCAGCGCCTGGTTCATGTCACCGTTCAGCGCGGCGCTGTTGTAGCCGTTACGCTCAAGAGCTTCTGCCACTTCCAGAGTCGCGTTTTTGGTACGAACGAAGATAATCGCCGCATCAAAATCTTCCGCTTCCAGGAAACGTACCAGTGCTTCGTTTTTACGCATACCCCAGACAGTCCAGTAGCTCTGGCTGATGTCAGGACGGGTAGTCACGCTGGACTGA > NZ_CP022686/2048957‑2049226
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| Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
N/A
