Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A30 F36 I0 R1
|
275 |
10897.2 |
10515506 |
98.4% |
10347257 |
135.1 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
freq |
annotation |
gene |
description |
| RA |
NZ_CP022686 |
2,130,829 |
A→C |
11.1% |
V237G (GTT→GGT) |
mreC ← |
rod shape‑determining protein MreC |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NZ_CP022686 | 2,130,829 | 0 | A | C | 11.1%
| 396.9
/ 10.8
| 199 | V237G (GTT→GGT) | mreC | rod shape‑determining protein MreC |
| Reads supporting (aligned to +/- strand): ref base A (146/25); new base C (3/24); total (149/50) |
| Fisher's exact test for biased strand distribution p-value = 2.38e-14 |
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 |
Only 100 of 204 total aligned reads displayed.
TTCCGGCGTCATCGGGTTAGCGCCGTTACGATCCGCGCCCCACAGCAGCAGCAGATAACGCAAACG‑TTGCAGTCCTGCAGTCGGACGCGCCTGAATCACAGTATAAGCGCGCTGGGTATCGAGTTTTACGGAAGAGACAACCGCGACCGGATAGCCTTCCGGGAAACGACCGCCCAGACCGGAAGTCACCAGCACATCACCAACACGAATATCCGTATTCGCTGGCAGATGCTCAAGCTGCAAATCATCCGTACAACCGTTACCGGCTGCAATTAC > NZ_CP022686/2130690‑2130965
|
ttCCGGCGTCATCGGGTTAGCGCCGTTACGATCCGCGCCCCACAGCAGCAGCAGATAACGCAAACG‑TTGCAGTCCTGCAGTCGGACGCGCCTGAATCACAGTATAAGCGCGCTGGGTATCGAGTTTTACGGAAGAGACaa > 7:360050/1‑140 (MQ=255)
ccGGCGTCATCGGGTTAGCGCCGTTACGATCCGCGCCCCACAGCAGCAGCAGATAACGCAAACG‑TTGCAGTCCTGCAGTCGGACGCGCCTGAATCACAGTATAAGCGCGCTGGGTATCGAGTTTTACGGAAGAGACaa > 3:1301563/1‑138 (MQ=255)
cgtctgcGGGTTAGCGCCTTTACGATCCGCGCCCCACAGCAGCAGCAGAAAACGCAACCG‑TTGCAGTCCTGCAGGCGGACGCGCCTTAATCCCCGTAAACGCGCGCTGGGAATCGTGTTTTACGCAAGAGACACCCGCGa < 8:1145751/134‑1 (MQ=255)
gTCATCGGGTTAGCGCCGTTACGATCCGCGCCCCACAGCAGCAGCAGATAACGCAAACG‑TTGCAGTCCTGCAGTCGGACGCGCCTGAATCACAGTATAAGCGCGCTGGGTATCGAGTTTTACGGAAGAGACAACCGCGAc > 5:266125/1‑140 (MQ=255)
gTCATCGGGTTAGCGCCGTTACGATCAGCGCCCCACAGAAGCAGCAGATACCGCAAACG‑ATGCAGTCCTGCACTCGGACGCGCCTGAATCACAGTATAAGCGAGCTGGCTCTCGAGTTGTACGGAAGAGACACCCGCGAc > 5:778103/1‑140 (MQ=255)
cATCGGGTTAGCGCCGTTACGATCCGCGCCCCACAGCAGCAGCAGATAACGCAAACG‑TTGCAGTCCTGCAGTCGGACGCGCCTGAATCACAGTATAAGCGCGCTGGGTATCGAGTTTTACGGAAGAGACAACCGCGAc > 2:5420/1‑138 (MQ=255)
tCGGGTTAGCGCCGTTACGATCCGCGCCCCACAGCAGCAGCAGATAACGCAAACG‑TTGCAGTCCTGCAGTCGGACGCGCCTGAATCACAGTATACGCGCGCTGGGTATCGAGTTTTACGGAAGAGACAACCGCGACCg < 4:114485/138‑1 (MQ=255)
cGGGTTAGCGCCGTTACGATCCGCGCCCCACAGCAGCAGCAGATAACGCAAACG‑TTGCAGTCCTGCAGTCGGACGCGCCTGAATCACAGTATAAGCGCGCTGGGTATAGAGTTTTACGGAAGAGACAACCGAGACCgg > 4:1271397/1‑138 (MQ=255)
aGCGCCGTTACGATCCGCGCCACACAGCAGCAGCAGATAACGAAAACG‑TTGCAGTCCTGCAGTCGGACGCGCCTGAATCACAGTATAAGCGCGCTGGGGATCGAGTTTTACGGAAGAGACAACCGCGCCCGGATAGcc > 1:1064065/1‑138 (MQ=255)
cgcCGTTACGATCCGCGCCCCACAGCAGCAGCAGATAACGCAAACG‑TTGCAGTCCTGCAGTCGGACGCGCCTGAATCACAGTATAAGCGCGCTGGGTATCGAGTTTTACGGAAGAGACAACCGCGCCCGGATCGCCtt > 2:1092066/1‑138 (MQ=255)
ttACGATCCGCGCCCCACAGCAGCAGCAGATAACGCAAACG‑TTGCAGTCCTGCAGTCGGACGCGCCTGAATCACAGTATAAGCGCGCTGGGTATCGAGTTTTACGGAAGAGACAACCGCGCCCGGATAGCCTTCCGGGaa > 6:870299/1‑140 (MQ=255)
ctctCCGCCCCCCACCGCCGCCGCAGATAACTCAAACG‑TGGCTGGCCGGATGTGGTCCGCGCCTGAATCACAGTATACGCGCGCGGGGTACCTCTTTGTACGGATGCGAAACCCGCGACCGGATAGCCTTCCGGGAAACg < 6:624761/137‑1 (MQ=255)
aTCCGCGCCCCACAGCAGCAGCAGATAACGCAAACG‑TTGCAGTCCTGCAGTCGGACGCGCCTGAATCACAGTATAAGCGCGCTGGGTATCGAGTTTTACGGAAGAGACAACCGCGACCGGATAGCCTTCCGGGAAACGAc > 5:40065/1‑140 (MQ=255)
ccGCGCCCCACAGCAGCAGCAGATACCGCAAACG‑TTGCAGTCCTGCAGTCGGCCGCGCCGGATTCACAGTATAAGCTCGCTGGGTATCGAGTGTTAAGGAAGAGACAACCGCGACCGGATAGCCTTCCGGGAAGCGAc > 3:705099/1‑138 (MQ=255)
ccGCGCCCCACAGCAGCAGCAGATAACGCAAACG‑TTGCTGTCCTGCAGTCGGACGCGCCTGAATCACAGTATAAGCGCGCTGGGTATCGAGTTTTACGGAAGAGACAACAGCGACCGGATAGCCTTCCGGGAAACGAc > 1:371382/1‑138 (MQ=255)
ccGCGCCCCACAGCAGCAGCAGATAACGCAAACG‑TTGCAGTCCTGCAGTCGGACGCGCCTGAATCACAGTATAAGCGCGCTGGGTATCGAGTTTTACGGAAGAGACAACCGCGACCGGATAGCCTTCCGGGAAACGAc > 3:434203/1‑138 (MQ=255)
cgcgCCCCACAGCAGCAGCAGATAACGCAAACG‑TTGCAGTCCTGCAGTCGGACGCGCCTGAATCACAGTATAAGCGCGCTGGGTAGCGAGTTTTACGGAAGAGACAACCGCGACCGGATAGCCTTCCGGGAAACGACCGc > 5:372450/1‑140 (MQ=255)
ccgcCACACAGCAGATTCATATAACGAAATCG‑TTGCTGTCCTCCTTTCGGACGCGCCTTAATCACAGTATACGCGCGCTGGGTATCGAGTTTTCCTGAAGAGACACCCGCGACCGGATAGCCTGCCGGGAAACGACCGcc < 6:127171/139‑1 (MQ=255)
cgcCCCACAGCAGCAGCAGATAACGCAAACG‑TTGCAGTCCTGCAGTCGGACGCGCCTGAATCACAGTATAAGCGCGCTGGGTATCGAGTTTTACGGAAGAGCCCACCGCGACCGGATAGCCTTCCGGGACACGACCGc > 3:784530/1‑138 (MQ=255)
cgcCCCACAGCAGCAGCAGATAACGCAAACG‑TTGCAGTCCTGCAGTCGGACGCGCCTGAATCACAGTATAAGCGCGCTGGGTATCGAGTTTTACGGAAGAGACAACCGCGACCGGATAGCCTTCCGGGAAccgcccgc > 3:9200/1‑138 (MQ=255)
cgcCCCACAGCAGCAGCAGATAACGCAAACG‑TTGCAGTCCTGCAGTCGGACGCGCCTGAATCACAGTATAAGCGCGCTGGGTATCGAGTTTTACGGAAGAGACAACCGCGACCGGATAGCCTTCCGGGAAACGACCGc > 1:1304091/1‑138 (MQ=255)
cgcCCCACAGCAGCAGCAGATAACGCAAACG‑TTGCAGTCCTGCAGTCGGACGCGCCTGAATCACAGTATAAGCGCGCTGGGTATCGAGTTTTACGGAAGAGACAACCGCGACCGGATAGCCTTCCGGGAAACGACCGc > 1:202270/1‑138 (MQ=255)
cgcCCCACAGCAGCAGCAGATAACGCAAACG‑TTGCAGTCCTGCAGTCGGACGCGCCTGAATCACAGGATAAGCGCGCTGGGTATCGAGGTTTACGGAAGAGACAACCGCGACCGGATCGCCTTCCGGGCAACGACCGccc > 6:1110073/1‑140 (MQ=255)
ccccACAGCAGCAGCAGATAACGCAAACG‑TTGCAGTCCTGCAGTCGGACGCGCCTGAATCACAGTATAAGCGCGCTGGGTATCGAGTTTTACGGAAGAGACAACAGCGACCGGATAGCCTTCCGGGAAACGACCGccc > 1:44647/1‑138 (MQ=255)
gcagATAACGCAAACG‑TTGCAGTCATGCAGTCGGACGCGCCGGAATCACAGTATAAGCGCGCTGGGTATCGAGTTTTACGGAAGAGACAACCGCGACCGGATAGCATTCCGGGAAACGACCGCCCAGACCGGAAGTCAcc > 7:1062403/1‑140 (MQ=255)
ataccccAAAGG‑TGGCCGCCCGGCAGGCGCCCGCGCCTGAAGAACTGTATACGCGCGTGGGTTATCGAGTTTAACGCACGCCCAACCCGCGACCGGATAGCCTTCCGGGAAACGACCGCCCAGACCGGAAGTCACCAg < 2:21666/132‑1 (MQ=255)
aaaaCGCAACCG‑TTGAAGTCCTGCTGTCGTCCCCGCCTGAATCACTTTATACGCGCGGGGGGTATCGAGTTTAACGCAATAGACACCCGCGACCGGATAGCCTTCCGGGAAACGACCGCCCAGACCGGAAGTCACCAGca < 6:286284/138‑1 (MQ=255)
aTAACG‑AAACGTTTGCAGTCCTGCAGTCGTACGCGCCTCAAACACTTTATAAGCGCGGTGGTTATCTTTTTTTACGTATGACACACCCGCGACCGGATAGCCTTCCGGGAAACGACCGCCCAGACCGGAAGTCACCAg < 4:446309/138‑1 (MQ=255)
cAAACG‑TTGCAGTCCTGCAGTCGGACGCGCCTGAATCACAGTATAAGCGCGCTGGGTATCGAGTTTTACGGAAGAGACAACCGCGACCGGATAGCCTTCCGGGAAACGACCGCCCAGACCGGACGTCACCAGCCCATc > 2:782013/1‑138 (MQ=255)
cAAACG‑TTGCAGTCCTGCAGTCGGACGCGCCTGAATCACAGTATAAGCGCGCTGGGTATCGAGTTTTACGGAAGAGACAACCGCGACCGGATAGCCTTCCGGGAAACGACCGCCCAGACCGGAAGTCACCAGCACATc > 1:686698/1‑138 (MQ=255)
aaaCG‑TTGCAGTCCTGCAGTCGGACGCGCCTGAATCACAGTATAAGCGCGCTGGGTATCGAGTTTTACGGAAGAGACAACCGCGACCGGATAGCCTTCCGGGAAACGACCGCCCAGACCGGAAGTCACCAGCACATCAcc > 8:902484/1‑140 (MQ=255)
gCAGTCCTGCAGTCGGACGCGCCTGAATCACAGTATAAGCGCGCTGGGTATCGAGTTTTACGGAAGAGCCAACCGCGACCGGATAGCCTTCCGGGAAACGACCGCCCAGACCGGAAGTCACCAGCACATCACCACCACGa > 6:1252291/1‑140 (MQ=255)
gCAGTCCTGCAGACGGACGCGCCTGAATCACAGTATAAGCGCGCTGGGTATCGAGTTTTAACGAAGAGACAACCGAGACCGGATAGCCTTCCGGGAAACGACCGCCCAGCCCGGAAGTCAACAGCACATCACCAACACGa > 8:869455/1‑140 (MQ=255)
ctgTCGTGCAGTCGGACGCGCGTGAATCACAGTATAAGCGCGCTGGTTAGCGAGTTTTACGTAAGAGAAAACCGCGACCGGATAGCCTTCCGGGAAACGACCGCCCAGACCGGAAGTCACCAGCACATCACCAACACg < 2:885432/136‑1 (MQ=255)
cAGTCCGCCAGGCGGCGGCGCCTTAAACACAGTATAAGCGCGCTGGGTATCGCGTTTTACGCAAGCGACAACCGCGACCGGATCGCCTTCCGGGAAACGACCGCCCAGACCGGAAGTCACCAGCACATCACCAACACGaa < 8:150527/140‑1 (MQ=255)
tggccggCAGGCGGCCGCGCCTGCATCACCGTATACGCGCGGTGGGTAGCGTGTTTTAGTGAAGAGACACCCGCGACCGGATAGCCTTCCGGGAAACGACCGCCCAGACCGGAAGTCACCAGCACATCACCAACACGa < 4:179952/132‑1 (MQ=255)
gCAGTCGGACGCGCCTGAATCACAGTATAAGCGCGCTGGGTATCGAGTTTTACGGAAGAGACAACCGCGACCGGATAGCCTTCCGGGAAACGACCGCCCAGACCGGAAGTCACCAGCAAATCACCAACACGAATATcc > 4:146279/1‑138 (MQ=255)
cAGTCGGACGCGCCTGAATCACAGTATAAGCGCGCTGGGTATCGAGTTTTACGGAAGAGACAACCGCGACCGGATAGCCTTCCGGGAAACGACCGCCCAGACCGGAAGTCACCAGCACATCACCAACACGAATATCCg > 2:713669/1‑138 (MQ=255)
cgccgtccgcgCCTTAATCACAGTATACGCGCGCTGGCCTCCCATTTTACCGCAATACACACCCGCGACCGGATAGCCTTCCGGGAAACGACCGCCCAGACCGGAAGTCACCAGCACATCACCAACACGAATATCCGTAt < 5:503694/133‑1 (MQ=255)
gTCGGACGCGCCTGAATCACAGTATAAGCGCGCTGGGTATCGAGTTTTACGGAAGAGACAACCGCGACCGGATAGACGTCCGGCAAACGCCAGCCAAGACCGGAAGTCTCAAGCACAACACCAACACGAagataccta > 3:1017021/1‑133 (MQ=255)
tCGGACGCGCCTGAATCACAGTATAAGCGCGCTGGGTATCGAGTTTTACGGAAGAGACAACCGCGACCGGATAGCCTTCCGGGAAACGCCCGCCCAGACCGGAAGTCACCAGCACATCACCAACACGAATATCCGTATTc > 5:822405/1‑140 (MQ=255)
tCGGACGCGCCTGAATCACAGTATAAGCGCGCTGGGTATCGAGTTTTACGGAAGAGACAACCGCGACCGGATAGCCTTCCGGGAAACGACCGCCCAGACCGGAAGTCACCAGCACATCACCAACACGAATATCCGTATTc > 5:1162970/1‑140 (MQ=255)
ggACGCGCCTGAATCACAGTATAAGCGCGCTGGGTATCGAGTTTTACGGATGAGACAACCGCGACCGGATAGCCTTCCTTGAACCGACCGCCCAGACCGGAAGTCACCAGAACATCACCAACACGAATATCAGTATTCGc > 8:614825/1‑140 (MQ=255)
ggACGCGCCTGAATCACAGTATAAGCGCGCTGGGTATCGAGTTTTACGGAAGAGACAACCGCGACCGGATAGCCTTCCGGGAAACGACCGCCCAGACCGGAAGTCACCAGCACATCACCAACCCGAATATCCGTATTCGc > 6:189475/1‑140 (MQ=255)
ggACGCGCCTGAATCACAGTATAAGCGCGCTGGGTATCGAGTTTTACGGAAGAGACAACCGCGACCGGATAGCCTTCCGGGAAACGACCGCCCAGACCGGAAGTCACCAGCACATCACCAACACGAATATCCGTATTCGc > 8:440278/1‑140 (MQ=255)
aCGCGCCTGAATCACAGTATAAGCGCGCTGGGTATCGAGTTTTACGGAAGAGACAACCGCGACCGGATAGCCTTCCGGGAAACGACCGCCCAGACCGGAAGTCACCAGCACATCACCAACACGAATATCCGTATTCGc > 2:512507/1‑138 (MQ=255)
aCGCGCCTGAATCACAGTATAAGCGCGCTGGGTATCGAGTTTTACGGAAGAGACAACCGCGACCGGATAGCCTTCCGGGAAACGACCGCCCAGACCGGAAGTCACCAGCACATCACCAACACGAATATCCGTATTCGc > 2:577996/1‑138 (MQ=255)
aCGCGCCTGAATCACAGTATAAGCGCGCTGGGTATCGAGTTTTACGGAAGAGACAACCGCGACCGGATAGCCTTCAGGGAAACGACCGCCCAGACCGGAAGTCACCAGCACATCCCCAACACGAATATCCGTAGTCGc > 2:703841/1‑138 (MQ=255)
ggcCTGAATAACATTATACGCGCGCTGGTTAGCGATTTTTCGGCAATACACACCCGCGACCGGATAGCCTTCCGGGAAACGACCGCCCAGACCGGAAGTCACCAGCACATCACCAACACGAATATCCGTATTCGCTGGCa < 6:447392/139‑1 (MQ=255)
cgcCTTAATCACAGTATAAGCGCGCTGGGTATCGAGTTTAACGGAAGAGACAACCGCGACCGGATAGCCTTCCGGGAAACGACCGCCCAGACCGGAAGTCACCAGCACATCACCAACACGAATATCCGTATTCGCTgg < 4:1095418/138‑1 (MQ=255)
cgcCTTAAACACTTTATCAGCGCGCTGGGTAGTGAGTTTTACGTAAGACCCAACCGCGACCGGATAGCCTTCCGGGAAACGACCGCCCAGACCGGAAGTCACCAGCACATCACCAACACGAATATCCGTATTCGCTGGCa < 7:786635/140‑1 (MQ=255)
gcCTCAATCACCTTAAACGCGGGGGGGTTAGCGATTTTTACTCAACACACAACCGCGACCGGATAGCCTTCCGGGAAACGACCGCCCAGACCGGAAGTCACCAGCACATCACCAACACGAATATCCGTATTCGCTGGc < 2:1362851/138‑1 (MQ=255)
aacacaGTAAAATCGCGCGGGTGAACGAGTTGAACGCCAGCCAAACCCGCGACCGGATAGCCTTCCGGGAAACGACCGCCCAGACCGGAAGTCACCAGCACATCACCAACACGAATATCCGTATGCGCTGGCAGATGc < 4:1230494/136‑1 (MQ=255)
caGTATAAGCGCGCTGGGTATCGAGTTTTACGGAAGAGACAACCGCGACCGGATAGCCTTCCGGGAAACGACCGCCCAGCCCGGAAGTCACCAGCACATCACCACCACGAATATCCGTATTCGCTGGCAGATGCTCAAGc > 7:815321/1‑140 (MQ=255)
gTATAAGCGCGCTGGGTATCGAGTTTTACGGAAGAGACAACCGCGACCGGATAGCCTTCCGGGAAACGACCGCCCAGACCGGAAGTCACCAGCACATCACCAACACGAATATCCGTATTCGCTGGCAGATGCTCAAGc > 3:1040541/1‑138 (MQ=255)
gTATAAGCGCGCTGGGTATCGAGTTTTACGGAAGAGACAACCGCGACCGGATAGCCTTCCGGGAAACGACCGCCCAGACCGGAAGTCACCAGCACATCACCAACACGAATATCCGTATTCGCTGGCAGATGCTCAAGc > 4:1113514/1‑138 (MQ=255)
ataAGCGCGCTGGGTATCGAGTTTTACGGAAGAGACAACCGCGACCGGATAGCCTTCCGGGAAACGACCGCCCAGACCGGAAGTCACCAGCACATCACCAACACGAATATCCGTATTCGCTGGCAGATGCTCAAGCTg > 1:56411/1‑138 (MQ=255)
taAGCGCGTTGGTTATCGAGTTTTACGGAAGACACACCCGCGACCGGATAGCCTTCCGGGAAACGACCGCCCAGACCGGAAGTCACCAGCACATCACCAACACGAATATCCGTATTCGCTGGCAGATGCTCAAGCTGc < 4:301863/138‑1 (MQ=255)
taAGCGCGCTGGGTATCGAGTTTTACGGAAGAGACAACCGCGACCGGATAGCCTTCCGGGAAACGACCGCCCAGACCGGAAGTCACCAGCACATCACCAACACGAATATCCGTATTCGCTGGCAGATGCTCACGCTGCaa > 6:1077381/1‑140 (MQ=255)
aGCGCGCTGGGTATCGAGTTTTACGGAAGAGACAACCGCGACCGGATAGCCTTCCGGGAAACGACCGCCCAGACCGGAAGTCACCAGCACATCACCAACACGAATATCCGTATTCGCTGGCAGATGCTCAATCTGCaa > 3:1122012/1‑138 (MQ=255)
gcgcgcTGGGTATCTAGTTTTACGGAAGCTACAACCGCGACCGGATAGCCTTCCGGGAAACGACCGCCCAGACCGGAAGTCACCAGCACATCACCAACACGAATATCCGTATTCGCTGGCAGATGCTCAAGCTGCAAatc < 8:826325/140‑1 (MQ=255)
ccgcgcgGGGTACCTATTTTTACGCAAGACACACCCGCGACCGGATAGCCTTCCGGGAAACGACCGCCCAGACCGGAAGTCACCAGCACATCACCAACACGAATATCCGTATTCGCTGGCAGATGCTCAAGCTGCAAatc < 8:53623/139‑1 (MQ=255)
gcggTGGGTATCTATTTTAACGTAAGAGACAACCGCGACCGGATAGCCTTCCGGGAAACGACCGCCCAGACCGGAAGTCACCAGCACATCACCAACACGAATATCCGTATTCGCTGGCAGATGCTCAAGCTGCAAatcat < 7:988358/140‑1 (MQ=255)
gcgcTGGGTCGCGAGTTTAACGGAAGAGACACCCGCGACCGGATAGCCTTCCGGGAAACGACCGCCCAGACCGGAAGTCACCAGCACATCACCAACACGAATATCCGTATTCGCTGGCAGATGCTCAAGCTGCAAatc < 4:375152/138‑1 (MQ=255)
cgcTGGGTATCGAGTTTTACGGAAGAGACAACCGCGACCGGATAGCCTTCCGGGAAACGACCGCCCAGCCCGGAAGTCACCAGCACATCACCAACACGAATATCCGTATTCGCTGGCAGATGCTCAAGCTGCAAatcatc > 5:272961/1‑140 (MQ=255)
cgcTGGGTATCGAGTTTTACGGAAGAGACAACCGCGACCGGATAGCCTTCCGGGAAACGACCGCCCAGACCGGAAGTCACCAGCACATCACCAACACGAATCTCCGTATTCGCTGGCAGATGCTCAAGCTGCAAatcatc > 5:567648/1‑140 (MQ=255)
cgcTGGGTATCGAGTTTTACGGAAGAGACAACCGCGACCGGATAGCCTTCCGGGAAACGACCGCCCAGACCGGAAGTCACCAGCACATCACCAACACGAATATCCGTATTCGCTGGCAGATGCTCAAGCTGCAAatcatc > 7:837326/1‑140 (MQ=255)
cgcTGGGTATCGAGTTTTACGGAAGAGACAACCGCGACCGGATAGCCTTCCGGGAAACGACCGCCCAGACCGGAAGTCACCAGCACATCACCAACACGAATATCCGTATTCGCTGGCAGATGCTCAAGCTGCAAataatc > 8:1010932/1‑140 (MQ=255)
cgcTGGGTATCGAGTTTTACGGAAGAGACAACCGCGACCGGATAGCCTTCCGGGAAACGACCGCCCAGACCGGAAGTCACCAGCACAGCACCAACACGAATATCCGTATTCGCTGGCAGATGCTCAAGCTGCAAatcatc > 8:1235056/1‑140 (MQ=255)
cgcTGGGTATCGAGTTTTACGGAAGAGACAACCGCGACCGGATAGCCTTCCGGGAAACGACCGCCCAGACCGGAAATCACCAGCACCTCACCAACACGAATATCCGTATTCGCTGGCAGATGCTCAAGCTGCAAatcatc > 6:970217/1‑140 (MQ=255)
cTGGGTATCGAGTTTTACGGAAGAGACAACCGCGACCGGATCGCCTTCCGGGAAACGACCGCCCAGACCGGAAGTCACCAGCACATCACCAACACGAATATCCGTATTCGCTGGCAGATGCTCAAGATGCAAATCATCCg > 6:1153924/1‑140 (MQ=255)
cTGGGTATCGAGTTTTACGGAAGAGACAACCGCGACCGGATAGCCTTCCGGGAAACGACCGCCCAGACCGGAAGTCCCCAGCACATCACCAACACGCATATCCGTATTCGCTGGCAGATGCTCAAGCTGCAAatcatcag > 7:523956/1‑138 (MQ=255)
cTGGGTATCGAGTTTTACGGAAGAGACAACCGCGACCGGATAGCCTTCCGGGAAACGACCGCCCAGACCGGAAGTCACCAGCACATCTCCAACACGAATATCCGTATTCGCTGGCAGATGCTCAAGCTGCAActcctc > 2:586823/1‑138 (MQ=255)
cTGGGTATCGAGTTTTACGGAAGAGACAACCGCGACCGGATAGCCTTCCGGGAAACGACCGCCCAGACCGGAAGTCACCAGCACATCCCCAACACGAATATCCGTATTCGCTGGCAGATGCTCAAGCTGCAAATCATCCg > 8:309379/1‑140 (MQ=255)
cTGGGTATCGAGTTTTACGGAAGAGACAACCGCGACCGGATAGCCTTCCGGGAAACGACCGCCCAGACCGGAAGTCACCAGCACATCACCAACACGAATATCCGTATTCGCTGGCAGATGCTCAAGCTGCAAatcatc > 2:467017/1‑138 (MQ=255)
cTGGGTATCGAGTTTTACGGAAGAGACAACCGCGACCGGATAGCCTTCCGGGAAACGACCGCCCAGACCGGAAGTCACCAGCACATCACCAACACGAATATCCGTATTCGCTGGCAGATGCTCAAGCTGCAAatcatc > 3:612775/1‑138 (MQ=255)
cTGGGTATCGAGTTTTACGGAAGAGACAACCGCGACCGGATAGCCTTCCGGGAAACGACCGCCCAGACCGGAAGTCACCAGCACATCACCAACACGAATATCCGTATTCGCTGGCAGATGCTCAAGCTGCAAATCATccc > 7:963218/1‑139 (MQ=255)
cTGGGTATCGAGTTTTACGGAAGAGACAACCGCGACCGGATAGCCTTCCGGGAAACGACCGCCCAGACCGGAAGTCACCAGCACATCACCAACACGAATATCCGTATTCGCTGGCAGATGCTCAAGCTGCAAATCATCCg > 7:168918/1‑140 (MQ=255)
cTGGGTATCGAGTTTTACGGAAGAGACAACCGCGACCGGATAGCCTTCCGGGAAACGACCGCCCAGACCGGAAGTCACCAGCACATCACCAACACGAATATCCGTATTCGCTGGCAGATGCTCAAGCTGCAAATCATCCg > 7:210305/1‑140 (MQ=255)
cTGGGTATCGAGTTTTACGGAAGAGACAACCGCGACCGGATAGCCTTCCGGGAAACGACCGCCCAGACCGGAAGTCACCAGCACATCACCAACACGAATATCCGTATTCGCTGGCAGATGCTCAAGCTGCAAATCATCCg > 7:594046/1‑140 (MQ=255)
cTGGGTATCGAGTTTTACGGAAGAGACAACCGCGACCGGATAGCCTTCCGGGAAACGACCGCCCAGACCGGAAGTCACCAGCACATCACCAACACGAATATCCGTATTCGCTGGCAGATGCTCAAGCTGCAAATCATCCg > 7:680730/1‑140 (MQ=255)
cTGGGTATCGAGTTTTACGGAAGAGACAACCGCGACCGGATAGCCTTCCGGGAAACGACCGCCCAGACCGGAAGTCACCAGCACATCACCAACACGAATATCCGTATTCGCTGGCAGATGCTCAAGCTGCAAATCATCCg > 5:729311/1‑140 (MQ=255)
cTGGGTATCGAGTTTTACGGAAGAGACAACCGAGACCGGATAGCCTTCCGGGAAACGACCGCCCAGACCGGAAGTCACCAGCACATCAACAACACGAATATCCGTATTCGCTGGCAGATGCTCAAGCTGCAAATCATccc > 6:56802/1‑139 (MQ=255)
cTGGGTATCGAGTGTTACGGAAGAGACACCCGCGACCGGATAGCCTTCCTGGAAACGACCGCCCAGACCGGAAGTCACCAGCCCATCACCAACACGAATATCCGTATTCGCTGGCAGATGCTCAAGCTGCAAATCATCCg > 5:153144/1‑140 (MQ=255)
gtgTAGCGATTTTTCCGCATTAGACCTCCGCGCCCGGATAGCCTTCCGGGAAACGACCGCCCAGACCGGAAGTCACCAGCACATCACCAACACGAATATCCGTATTCGCTGGCAGATGCTCAAGCTGCAAATCATCCg < 2:183491/136‑1 (MQ=255)
ggttATCGAGTTTTACGGAAGAGACAACCGCGACCGGATAGCCTTCCGGGAAACGACCGCCCAGACCGGAAGTCACCAGCACATCACCAACACTAATATCCGTATTCGATGGCAGATGCTCAAGCTGCAAATCATCCg > 3:475442/4‑138 (MQ=255)
ggtgaTCGAGTTTTACGGAAGAGACAACCGCCACCGGATAGCCTGCCGGGAAACGCCCGCCAAGACCGGAAGTCAACCGCCCATAACCAACACGAATACACGTATTCGCTGTCAGATGCTAAATCTGACAATCATCCg > 2:1039539/5‑138 (MQ=255)
gggTATCGAGTTTTACGGAAGAGACAACCGCGACCGGATAGCCTTCCGGGAACCGACCGCCCAGACCGGAAGTCACAAGCACATCACCAACACTAATATCAGTATTCGCTGGCAGAATCTCAAGCTGCAAATCATCCg > 3:1113882/1‑138 (MQ=255)
gggTATCGAGTTTTACGGAAGAGACAACCGCGACCGGATAGCCTTCCGGGAAACGACCGCCCAGACCGGAAGTCACCAGCACATCACCAACACGAATATCCGTATTCGCTGGCAGATGCTCAAGCTGCAAATCATCCg > 1:134442/1‑138 (MQ=255)
gggTATCGAGTTTTACGGAAGAGACAACCGCGACCGGATAGCCTTCCGGGAAACGACCGCCCAGACCGGAAGTCACCAGCACATCACCAACACGAATATCCGTATTCGCTGGCAGATGCTCAAGCTGCAAATCATCCg > 2:395776/1‑138 (MQ=255)
gggTATCGAGTTTTACGGAAGAGACAACCGCGACCGGATAGCCTTCCGGGAAACGACCGCCCAGACCGGAAGTCACCAGCACATCACCAACACGAATATCCGTATTCGCTGGCAGATGCTCAAGCTGCAAATCATCCg > 3:655182/1‑138 (MQ=255)
gggTATCGAGTTTTACGGAAGAGACAACCGCGACCGGATAGCCTTCCGGGAAACGACCGCCCAGACCGGAAGTCACCAGCACATCACCAACACGAATATCCGTATTCGCTGGCAGATGCTCAAGCTGCAAATCATCCg > 1:1020827/1‑138 (MQ=255)
tagggattttaACGGAAGAGAACACCGCGACCGGATAGCCTTCCGGGAAACGACCGCCCAGACCGGAAGTCACCAGCACATCACCAACACGAATATCCGTATTCGCTGGCAGATGCTCAAGCTGCAAATCATCCGTACaa < 5:974166/133‑1 (MQ=255)
tttACGGAAGAGACAACCGCGACCGGATAGCCTTCCGGGAAACGACCGCCCAGACCGGAAGTCACCAGCACATCACCAACACGAATATCCGTATTCGCTGGCAGATGCTCAAGCTGCAAATCATCCGTACAACCGTTa > 4:63741/1‑138 (MQ=255)
cGGAAGAGACAACCGCGACCGGATAGCCTTCCGGGAAACGACCGCCCAGACCGGAAGTCACCAGCACATCACCAACACGAATATCCGTATTCGCTGGCAGATGCTCAAGCTGCAAATCATCCGTACAACCGTTACCgg > 1:520865/1‑138 (MQ=255)
gaCAACCGCGACCGGATAGCCTTCCGGGAAACGACCGCCCAGACCGGAAGTCACCAGCACATCACCAACACGAATATCCGTATTCGCTGGCAGATGCTCAAGCTGCAAATCATCCGTACAACCGTTACCGGCTGCAAt < 2:1304091/138‑1 (MQ=255)
ccAACCGCGACCGGATAGCCTTCCGGGAAACGACCGCCCAGACCGGAAGTCACCAGCACATCACCAACACGAATATCCGTATTCGCTGGCAGATGCTCAAGCTGCAAATCATCCGTACAACCGTTACCGGCTGCAATTAc < 8:1072565/139‑1 (MQ=255)
acacCCGCGACCGGATAGCCTTCCGGGAAACGACCGCCCAGACCGGAAGTCACCAGCACATCACCAACACGAATATCCGTATTCGCTGGCAGATGCTCAAGCTGCAAATCATCCGTACAACCGTTACCGGCTGCAAtt < 4:221699/138‑1 (MQ=255)
aaaaCCGCGACCGGATAGCCTTCCGGGAAACGACCGCCCAGACCGGAAGTCACCAGCACATCACCAACACGAATATCCGTATTCGCTGGCAGATGCTCAAGCTGCAAATCATCCGTACAACCGTTACCGGCTGCAAtt < 2:1209372/136‑1 (MQ=255)
aCAACCGCGACCGGATAGCCTTCCGGGAAACGACCGCCCAGACCGGAAGTCACCAGCACATCACCAACACGAATATCCGTATTCGCTGGCAGATGCTCAAGCTGCAAATCATCCGTACAACCGTTACCGGCCGCAATTAc < 7:769592/140‑1 (MQ=255)
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TTCCGGCGTCATCGGGTTAGCGCCGTTACGATCCGCGCCCCACAGCAGCAGCAGATAACGCAAACG‑TTGCAGTCCTGCAGTCGGACGCGCCTGAATCACAGTATAAGCGCGCTGGGTATCGAGTTTTACGGAAGAGACAACCGCGACCGGATAGCCTTCCGGGAAACGACCGCCCAGACCGGAAGTCACCAGCACATCACCAACACGAATATCCGTATTCGCTGGCAGATGCTCAAGCTGCAAATCATCCGTACAACCGTTACCGGCTGCAATTAC > NZ_CP022686/2130690‑2130965
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| Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
N/A
