Notes

Publication: None

ALE, flask, and isolate counts

ALE replicate Flask count Isolate count
1 1 1
2 1 1
3 1 1
4 1 1
5 1 1
6 1 1
7 1 1
8 1 1
9 1 1
10 1 1
11 1 1
12 1 1
12 12 12

ALE experiment mutation counts

Mutation Type Unique Observed
Single Base Substitutions 2450 2640
Multiple Base Substitutions 4 4
Deletions 191 313
Insertions 238 338
Mobile Element Insertions 5 16
Amplifications 0 0
Gene Conversions 0 0
Inversions 0 0
Total 2888 3311

Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.
ALE, Flask, Isolate Predicted Mutations Unassigned Missing Coverage Evidence Mean Coverage Total Reads Percent Mapped Mapped Reads Average Read Length
A1 F61 I1 R1 285 0 35.0 1253720 99.2% 1243690 132.7
A2 F61 I1 R1 315 0 50.2 1732926 99.0% 1715596 139.0
A3 F61 I1 R1 171 0 113.3 3838922 99.2% 3808210 138.6
A4 F61 I1 R1 293 0 42.9 1478862 99.2% 1467031 139.2
A5 F61 I1 R1 195 0 36.0 1291878 99.1% 1280251 132.7
A6 F61 I1 R1 310 0 48.7 1662976 99.1% 1648009 139.1
A7 F61 I1 R1 256 0 90.0 3098426 99.2% 3073638 139.0
A8 F61 I1 R1 258 0 57.8 2044532 99.1% 2026131 139.3
A9 F61 I1 R1 307 0 143.5 4991136 99.3% 4956198 139.1
A10 F61 I1 R1 358 0 27.8 1032290 99.0% 1021967 132.7
A11 F61 I1 R1 250 0 439.5 15167374 99.3% 15061202 139.3
A12 F61 I1 R1 313 0 38.7 1336524 99.1% 1324495 139.6

Mutation Needle Plot

Mutation Targets

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