Notes

Publication: None

ALE, flask, and isolate counts

ALE replicate Flask count Isolate count
0 1 1
26 3 3
27 3 3
28 3 3
29 3 3
30 3 3
6 16 16

ALE experiment mutation counts

Mutation Type Unique Observed
Single Base Substitutions 154 347
Multiple Base Substitutions 0 0
Deletions 5 48
Insertions 3 20
Mobile Element Insertions 0 0
Amplifications 35 55
Gene Conversions 0 0
Inversions 0 0
Total 197 470

Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.
ALE, Flask, Isolate Predicted Mutations Unassigned Missing Coverage Evidence Mean Coverage Total Reads Percent Mapped Mapped Reads Average Read Length
A0 F0 I1 R1 24 0 2928.1 6469480 98.4% 6365968 135.9
A26 F2 I0 R1 64 0 5414.3 5027226 98.2% 4936735 134.4
A26 F12 I0 R1 131 0 9881.0 7547414 98.3% 7419107 134.8
A26 F36 I0 R1 149 0 10545.8 7272710 98.3% 7149073 134.9
A27 F2 I0 R1 73 0 6005.1 5484070 98.3% 5390840 135.6
A27 F12 I0 R1 65 0 5796.1 4494228 98.4% 4422320 135.6
A27 F36 I0 R1 164 0 7919.5 7665810 98.4% 7543157 135.8
A28 F2 I0 R1 74 0 6379.7 5468672 98.4% 5381173 135.7
A28 F11 I0 R1 246 0 10296.8 9866480 98.4% 9708616 135.7
A28 F35 I0 R1 174 0 9808.2 8488800 98.4% 8352979 135.6
A29 F2 I0 R1 207 0 10827.9 9263290 98.4% 9115077 135.4
A29 F11 I0 R1 249 0 11230.8 10274356 98.4% 10109966 135.6
A29 F36 I0 R1 179 0 9550.8 8038540 98.3% 7901884 136.2
A30 F2 I0 R1 181 0 7914.3 8336376 98.4% 8202993 136.1
A30 F12 I0 R1 192 0 11691.1 8856334 98.4% 8714632 135.4
A30 F36 I0 R1 275 0 10897.2 10515506 98.4% 10347257 135.1

Mutation Needle Plot

Mutation Targets

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