Notes

Publication: None

ALE, flask, and isolate counts

ALE replicate Flask count Isolate count
0 1 1
5 1 3
6 1 3
7 1 3
13 1 3
14 1 3
15 1 3
16 1 3
8 8 22

ALE experiment mutation counts

Mutation Type Unique Observed
Single Base Substitutions 66 115
Multiple Base Substitutions 1 2
Deletions 19 36
Insertions 3 9
Mobile Element Insertions 11 27
Amplifications 0 0
Gene Conversions 0 0
Inversions 0 0
Total 100 189

Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.
ALE, Flask, Isolate Predicted Mutations Unassigned Missing Coverage Evidence Mean Coverage Total Reads Percent Mapped Mapped Reads Average Read Length
A0 F0 I1 R1 1 0 164.8 5331425 97.3% 5187476 147.2
A5 F61 I3 R1 12 0 468.6 14816452 97.2% 14401591 150.5
A5 F61 I7 R1 9 0 392.1 12505751 96.5% 12068049 150.5
A5 F61 I10 R1 9 0 424.4 13378743 97.7% 13071031 150.5
A6 F71 I1 R1 11 1 330.6 10304997 98.6% 10160727 150.6
A6 F71 I7 R1 2 1 490.4 15345175 98.5% 15114997 150.5
A6 F71 I8 R1 2 1 490.1 15335668 98.6% 15120968 150.5
A7 F78 I2 R1 2 1 570.5 17912877 98.4% 17626270 150.5
A7 F78 I5 R1 2 1 504.9 15772303 98.4% 15519946 150.5
A7 F78 I7 R1 3 1 516.2 16189016 98.4% 15929991 150.5
A13 F77 I2 R1 9 0 280.8 8648304 98.3% 8501282 150.5
A13 F77 I8 R1 5 0 529.7 16433799 98.8% 16236593 150.5
A13 F77 I10 R1 9 0 359.1 11024114 98.6% 10869776 150.5
A14 F92 I2 R1 5 1 501.5 15495203 98.9% 15324755 150.5
A14 F92 I4 R1 10 0 588.7 18456074 98.7% 18216145 150.5
A14 F92 I7 R1 7 0 435.5 13502752 98.7% 13327216 150.5
A15 F79 I2 R1 8 0 585.8 18315656 99.0% 18132499 150.5
A15 F79 I8 R1 8 1 483.4 15240712 98.1% 14951138 150.5
A15 F79 I10 R1 36 1 479.3 14713262 98.2% 14448423 150.6
A16 F88 I1 R1 43 1 510.2 15794406 97.6% 15415340 150.5
A16 F88 I6 R1 9 0 375.8 11840974 98.0% 11604154 150.6
A16 F88 I7 R1 9 0 529.8 16590883 98.4% 16325428 150.6

Mutation Needle Plot

Mutation Targets

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