mutation predictions | marginal predictions | summary statistics | genome diff | command line log
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breseq version 0.33.1 revision 8505477f25b3
mutation predictions | marginal predictions | summary statistics | genome diff | command line log |
| Predicted mutations | |||||
|---|---|---|---|---|---|
| evidence | position | mutation | annotation | gene | description |
| RA | 475,640 | T→G | D375A (GAT→GCT) | fsr ← | predicted fosmidomycin efflux system |
| RA | 1,305,682 | (A)6→5 | coding (558/1461 nt) | cls ← | cardiolipin synthetase |
| RA | 1,329,516 | C→T | H33Y (CAC→TAC) | topA → | DNA topoisomerase I |
| RA | 1,329,919 | C→T | A167V (GCG→GTG) | topA → | DNA topoisomerase I |
| RA | 1,573,659 | A→C | D39A (GAT→GCT) | yneC → | autoinducer‑2 (AI‑2) modifying protein LsrG |
| RA | 1,588,754 | A→C | F50L (TTT→TTG) | eamA ← | cysteine and O‑acetyl‑L‑serine efflux system |
| RA | 1,601,233 | T→C | intergenic (+162/‑154) | ydfK → / → pinQ | predicted DNA‑binding transcriptional regulator/predicted site‑specific recombinase |
| JC | 1,733,297 | (CGTATGAA)1→2 | coding (333/1413 nt) | pykF → | pyruvate kinase |
| RA | 2,114,852 | (T)8→7 | coding (187/366 nt) | ECB_02002 ← | hypothetical protein |
| RA | 2,193,779 | G→T | L143I (CTT→ATT) | yeiB ← | conserved inner membrane protein |
| RA | 2,686,827 | C→T | A292V (GCC→GTC) | gabD → | succinate‑semialdehyde dehydrogenase I, NADP‑dependent |
| RA | 3,268,816 | (A)8→7 | intergenic (‑131/‑128) | rplU ← / → ispB | 50S ribosomal protein L21/octaprenyl diphosphate synthase |
| RA | 3,762,741 | A→T | K662I (AAA→ATA) | spoT → | bifunctional (p)ppGpp synthetase II/ guanosine‑3',5'‑bis pyrophosphate 3'‑pyrophosphohydrolase |
| RA | 3,875,632 | (T)7→8 | intergenic (‑66/+287) | glmU ← / ← atpC | bifunctional N‑acetylglucosamine‑1‑phosphate uridyltransferase/glucosamine‑1‑phosphate acetyltransferase/F0F1 ATP synthase subunit epsilon |
| MC JC | 3,894,997 | Δ6,934 bp | IS150‑mediated | rbsD–[yieO] | rbsD, rbsA, rbsC, rbsB, rbsK, rbsR, [yieO] |
| RA | 3,928,260 | T→A | I15N (ATC→AAC) | rho → | transcription termination factor Rho |
| RA | 4,134,767 | (A)5→4 | intergenic (‑59/‑95) | argE ← / → argC | acetylornithine deacetylase/N‑acetyl‑gamma‑glutamyl‑phosphate reductase |
| JC | 4,134,769 | Δ3 bp | intergenic (‑61/‑91) | argE ← / → argC | acetylornithine deacetylase/N‑acetyl‑gamma‑glutamyl‑phosphate reductase |
| RA | 4,201,934 | T→G | Y209S (TAT→TCT) | iclR ← | DNA‑binding transcriptional repressor |
| RA | 4,520,058 | T→C | intergenic (‑419/‑1037) | yjhA ← / → fimB | N‑acetylnuraminic acid outer membrane channel protein/recombinase involved in phase variation; regulator for fimA; b4312_1 |
| JC JC | 4,524,522 | IS186 (+) +6 bp | coding (494‑499/549 nt) | fimA → | major type 1 subunit fimbrin (pilin) |