mutation predictions | marginal predictions | summary statistics | genome diff | command line log
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breseq version 0.33.1 revision 8505477f25b3
mutation predictions | marginal predictions | summary statistics | genome diff | command line log |
| Marginal new junction evidence (lowest skew 10 of 15 shown) | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | BX571857 | 980997 = | NA (NA) | 47 (0.370) | 38/138 | 3.3 | NA | noncoding (1/27 nt) | Repeat flanking prophage phiSa4(476) | Repeat flanking prophage phiSa4(476) |
| ? | BX571857 | = 1025750 | NA (NA) | intergenic (+519/‑57) | SAS0954/SAS0955 | amidase/putative protease | |||||
| * | ? | BX571857 | = 596982 | 169 (0.950) | 20 (0.110) | 8/192 | 14.9 | 10.6% | coding (2577/2874 nt) | SAS0519 | putative surface anchored protein |
| ? | BX571857 | = 2700094 | 167 (0.940) | coding (2374/2718 nt) | SAS2516 | fibrinogen and keratin‑10 binding surface anchored protein | |||||
| * | ? | BX571857 | = 2700094 | 165 (0.930) | 22 (0.130) | 7/182 | 15.0 | 12.6% | coding (2374/2718 nt) | SAS2516 | fibrinogen and keratin‑10 binding surface anchored protein |
| ? | BX571857 | 2700107 = | 149 (0.880) | coding (2361/2718 nt) | SAS2516 | fibrinogen and keratin‑10 binding surface anchored protein | |||||
| * | ? | BX571857 | = 596598 | 199 (1.120) | 11 (0.070) | 6/180 | 15.5 | 6.1% | coding (2193/2874 nt) | SAS0519 | putative surface anchored protein |
| ? | BX571857 | = 2700094 | 150 (0.900) | coding (2374/2718 nt) | SAS2516 | fibrinogen and keratin‑10 binding surface anchored protein | |||||
| * | ? | BX571857 | 596590 = | 202 (1.130) | 9 (0.050) | 5/188 | 16.5 | 4.9% | coding (2185/2874 nt) | SAS0519 | putative surface anchored protein |
| ? | BX571857 | 2700104 = | 153 (0.880) | coding (2364/2718 nt) | SAS2516 | fibrinogen and keratin‑10 binding surface anchored protein | |||||
| * | ? | BX571857 | 596995 = | 161 (0.900) | 13 (0.070) +G |
5/190 | 16.6 | 7.6% | coding (2590/2874 nt) | SAS0519 | putative surface anchored protein |
| ? | BX571857 | 2700102 = | 158 (0.890) | coding (2366/2718 nt) | SAS2516 | fibrinogen and keratin‑10 binding surface anchored protein | |||||
| * | ? | BX571857 | = 2027394 | 124 (0.700) | 3 (0.020) | 3/160 | 16.7 | 2.3% | intergenic (‑390/+122) | SAS1866/SAS1867 | putative exported protein/amidase (fragment) |
| ? | BX571857 | 2028235 = | 150 (1.010) | intergenic (‑384/+267) | SAS1867/SAS1868 | amidase (fragment)/staphylokinase precursor | |||||
| * | ? | BX571857 | 596989 = | 158 (0.890) | 8 (0.040) | 5/192 | 16.7 | 4.7% | coding (2584/2874 nt) | SAS0519 | putative surface anchored protein |
| ? | BX571857 | = 601554 | 166 (0.930) | coding (3909/4098 nt) | SAS0520 | putative surface anchored protein | |||||
| * | ? | BX571857 | 596989 = | 159 (0.890) | 10 (0.060) +GTCTGA |
4/180 | 16.9 | 6.1% | coding (2584/2874 nt) | SAS0519 | putative surface anchored protein |
| ? | BX571857 | 2700095 = | 168 (0.940) | coding (2373/2718 nt) | SAS2516 | fibrinogen and keratin‑10 binding surface anchored protein | |||||
| * | ? | BX571857 | = 601319 | 184 (1.030) | 9 (0.060) +TTCAGACAGCGAT |
3/166 | 17.0 | 5.7% | coding (3674/4098 nt) | SAS0520 | putative surface anchored protein |
| ? | BX571857 | = 2700088 | 161 (0.900) | coding (2380/2718 nt) | SAS2516 | fibrinogen and keratin‑10 binding surface anchored protein | |||||