mutation predictions | marginal predictions | summary statistics | genome diff | command line log
|
breseq version 0.29.0 revision 8f9c342918e4
mutation predictions | marginal predictions | summary statistics | genome diff | command line log |
| Marginal new junction evidence (lowest skew 10 of 1307 shown) | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | = 4636885 | 107 (0.810) | 6 (0.050) | 4/168 | NT | 5.4% | coding (190/1425 nt) | creC | sensory histidine kinase in two‑component regulatory system with CreB or PhoB |
| ? | NC_000913 | = 4636902 | 110 (0.890) | coding (207/1425 nt) | creC | sensory histidine kinase in two‑component regulatory system with CreB or PhoB | |||||
| * | ? | NC_000913 | 4634391 = | 114 (0.870) | 13 (0.110) | 9/164 | NT | 10.2% | coding (595/648 nt) | ytjC | phosphatase |
| ? | NC_000913 | 4634423 = | 123 (1.010) | coding (627/648 nt) | ytjC | phosphatase | |||||
| * | ? | NC_000913 | 4634298 = | 150 (1.140) | 4 (0.030) | 4/168 | NT | 2.9% | coding (502/648 nt) | ytjC | phosphatase |
| ? | NC_000913 | 4634320 = | 125 (1.010) | coding (524/648 nt) | ytjC | phosphatase | |||||
| * | ? | NC_000913 | 4633257 = | 164 (1.240) | 10 (0.080) | 7/170 | NT | 6.4% | coding (489/513 nt) | yjjX | non‑canonical purine NTP phosphatase, ITPase/XTPase |
| ? | NC_000913 | 4633302 = | 135 (1.070) | coding (444/513 nt) | yjjX | non‑canonical purine NTP phosphatase, ITPase/XTPase | |||||
| * | ? | NC_000913 | 4631870 = | 143 (1.090) | 7 (0.060) | 4/166 | NT | 5.0% | coding (1138/1938 nt) | slt | lytic murein transglycosylase, soluble |
| ? | NC_000913 | 4631896 = | 131 (1.070) | coding (1164/1938 nt) | slt | lytic murein transglycosylase, soluble | |||||
| * | ? | NC_000913 | = 4627204 | 102 (0.770) | 3 (0.030) | 3/162 | NT | 3.0% | coding (1293/1383 nt) | radA | DNA repair protein |
| ? | NC_000913 | = 4627223 | 102 (0.850) | coding (1312/1383 nt) | radA | DNA repair protein | |||||
| * | ? | NC_000913 | = 4625728 | 118 (0.900) | 10 (0.080) | 6/164 | NT | 7.9% | coding (834/969 nt) | serB | 3‑phosphoserine phosphatase |
| ? | NC_000913 | = 4625738 | 126 (1.040) | coding (844/969 nt) | serB | 3‑phosphoserine phosphatase | |||||
| * | ? | NC_000913 | 4624213 = | 124 (0.940) | 6 (0.050) | 4/168 | NT | 5.1% | coding (577/645 nt) | ytjB | SMP_2 family putative membrane‑anchored periplasmic protein |
| ? | NC_000913 | 4624245 = | 105 (0.840) | coding (545/645 nt) | ytjB | SMP_2 family putative membrane‑anchored periplasmic protein | |||||
| * | ? | NC_000913 | 4623771 = | 162 (1.230) | 16 (0.130) | 8/164 | NT | 9.9% | coding (347/1017 nt) | lplA | lipoate‑protein ligase A |
| ? | NC_000913 | 4623797 = | 141 (1.160) | coding (321/1017 nt) | lplA | lipoate‑protein ligase A | |||||
| * | ? | NC_000913 | = 4621981 | 140 (1.060) | 6 (0.050) | 6/166 | NT | 4.3% | coding (213/1332 nt) | yjjJ | putative protein kinase |
| ? | NC_000913 | = 4622003 | 139 (1.130) | coding (235/1332 nt) | yjjJ | putative protein kinase | |||||