mutation predictions | marginal predictions | summary statistics | genome diff | command line log
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breseq version 0.29.0 revision 8f9c342918e4
mutation predictions | marginal predictions | summary statistics | genome diff | command line log |
| Marginal new junction evidence (lowest skew 10 of 304 shown) | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | = 4636885 | 85 (0.930) | 6 (0.070) | 5/168 | NT | 6.5% | coding (190/1425 nt) | creC | sensory histidine kinase in two‑component regulatory system with CreB or PhoB |
| ? | NC_000913 | = 4636902 | 92 (1.070) | coding (207/1425 nt) | creC | sensory histidine kinase in two‑component regulatory system with CreB or PhoB | |||||
| * | ? | NC_000913 | = 4632232 | 90 (0.990) | 5 (0.060) | 4/170 | NT | 5.5% | coding (1500/1938 nt) | slt | lytic murein transglycosylase, soluble |
| ? | NC_000913 | = 4632249 | 87 (1.000) | coding (1517/1938 nt) | slt | lytic murein transglycosylase, soluble | |||||
| * | ? | NC_000913 | 4601572 = | 84 (0.920) | 9 (0.110) | 6/162 | NT | 11.7% | intergenic (‑55/+52) | dnaT/yjjB | DNA biosynthesis protein (primosomal protein I)/DUF3815 family inner membrane protein |
| ? | NC_000913 | 4601608 = | 60 (0.720) | intergenic (‑91/+16) | dnaT/yjjB | DNA biosynthesis protein (primosomal protein I)/DUF3815 family inner membrane protein | |||||
| * | ? | NC_000913 | = 4589108 | 86 (0.940) | 9 (0.110) | 9/162 | NT | 9.8% | intergenic (‑29/+21) | yjiX/yjiY | DUF466 family protein/putative transporter |
| ? | NC_000913 | = 4589112 | 87 (1.050) | intergenic (‑33/+17) | yjiX/yjiY | DUF466 family protein/putative transporter | |||||
| * | ? | NC_000913 | = 4570520 | 89 (0.980) | 7 (0.080) | 5/168 | NT | 7.5% | coding (1055/1413 nt) | yjiR | putative DNA‑binding transcriptional regulator/putative aminotransferase |
| ? | NC_000913 | = 4570536 | 89 (1.030) | coding (1039/1413 nt) | yjiR | putative DNA‑binding transcriptional regulator/putative aminotransferase | |||||
| * | ? | NC_000913 | = 4562622 | 77 (0.840) | 6 (0.070) | 4/162 | NT | 7.1% | coding (54/1179 nt) | yjiJ | DUF1228 family putative inner membrane MFS superfamily transporter |
| ? | NC_000913 | = 4562653 | 86 (1.040) | coding (23/1179 nt) | yjiJ | DUF1228 family putative inner membrane MFS superfamily transporter | |||||
| * | ? | NC_000913 | 4548883 = | 102 (1.120) | 7 (0.090) | 5/160 | NT | 7.8% | coding (76/903 nt) | fimH | minor component of type 1 fimbriae |
| ? | NC_000913 | 4548916 = | 73 (0.890) | coding (109/903 nt) | fimH | minor component of type 1 fimbriae | |||||
| * | ? | NC_000913 | 4541922 = | 101 (1.110) | 8 (0.090) | 6/170 | NT | 7.9% | intergenic (+363/‑115) | fimB/fimE | tyrosine recombinase/inversion of on/off regulator of fimA/tyrosine recombinase/inversion of on/off regulator of fimA |
| ? | NC_000913 | 4541952 = | 91 (1.040) | intergenic (+393/‑85) | fimB/fimE | tyrosine recombinase/inversion of on/off regulator of fimA/tyrosine recombinase/inversion of on/off regulator of fimA | |||||
| * | ? | NC_000913 | 4532946 = | 98 (1.070) | 5 (0.060) | 5/166 | NT | 5.3% | coding (238/747 nt) | yjhP | putative methyltransferase |
| ? | NC_000913 | 4532970 = | 86 (1.010) | coding (214/747 nt) | yjhP | putative methyltransferase | |||||
| * | ? | NC_000913 | 4526710 = | 83 (0.910) | 4 (0.050) | 4/162 | NT | 5.2% | coding (179/783 nt) | sgcR | putative DNA‑binding transcriptional regulator |
| ? | NC_000913 | 4526743 = | 69 (0.830) | coding (146/783 nt) | sgcR | putative DNA‑binding transcriptional regulator | |||||