mutation predictions | marginal predictions | summary statistics | genome diff | command line log
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breseq version 0.35.4 revision f352f80f4bc9
mutation predictions | marginal predictions | summary statistics | genome diff | command line log |
| Marginal new junction evidence (lowest skew 10 of 952 shown) | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | CP009273 | = 4622539 | 670 (1.410) | 5 (0.010) | 3/98 | NT | 0.77% | intergenic (+52/‑38) | slt/trpR | lytic murein transglycosylase, soluble/transcriptional repressor, tryptophan‑binding |
| ? | CP009273 | = 4622550 | 701 (1.690) | intergenic (+63/‑27) | slt/trpR | lytic murein transglycosylase, soluble/transcriptional repressor, tryptophan‑binding | |||||
| * | ? | CP009273 | = 4616991 | 192 (0.400) | 7 (0.020) | 3/96 | NT | 4.0% | coding (1263/1383 nt) | radA | DNA repair protein |
| ? | CP009273 | = 4616997 | 169 (0.420) | coding (1269/1383 nt) | radA | DNA repair protein | |||||
| * | ? | CP009273 | 4607857 = | 434 (0.910) | 10 (0.020) | 6/96 | NT | 2.6% | coding (718/780 nt) | deoC | 2‑deoxyribose‑5‑phosphate aldolase, NAD(P)‑linked |
| ? | CP009273 | 4607913 = | NA (NA) | coding (774/780 nt) | deoC | 2‑deoxyribose‑5‑phosphate aldolase, NAD(P)‑linked | |||||
| * | ? | CP009273 | = 4603957 | 223 (0.470) | 6 (0.020) | 3/94 | NT | 2.7% | coding (660/780 nt) | yjjV | putative DNase |
| ? | CP009273 | = 4603970 | 253 (0.630) | coding (673/780 nt) | yjjV | putative DNase | |||||
| * | ? | CP009273 | 4559156 = | 730 (1.540) | 4 (0.010) | 4/96 | NT | 0.68% | pseudogene (342/921 nt) | yjiP | pseudogene, transposase_31 family protein |
| ? | CP009273 | 4559196 = | 550 (1.350) | pseudogene (382/921 nt) | yjiP | pseudogene, transposase_31 family protein | |||||
| * | ? | CP009273 | = 4549707 | 386 (0.810) | 3 (0.010) | 3/108 | NT | 0.84% | coding (111/462 nt) | yjiG | SpmB family inner membrane protein |
| ? | CP009273 | = 4549730 | 339 (0.740) | coding (88/462 nt) | yjiG | SpmB family inner membrane protein | |||||
| * | ? | CP009273 | 4548119 = | 356 (0.750) | 8 (0.020) | 3/88 | NT | 2.8% | intergenic (‑13/+52) | hypT/iadA | hypochlorite‑responsive transcription factor/isoaspartyl dipeptidase |
| ? | CP009273 | 4548166 = | 266 (0.710) | intergenic (‑60/+5) | hypT/iadA | hypochlorite‑responsive transcription factor/isoaspartyl dipeptidase | |||||
| * | ? | CP009273 | 4539678 = | 456 (0.960) | 4 (0.010) | 4/102 | NT | 0.95% | intergenic (+151/+92) | fimH/gntP | minor component of type 1 fimbriae/fructuronate transporter |
| ? | CP009273 | 4539701 = | 416 (0.960) | intergenic (+174/+69) | fimH/gntP | minor component of type 1 fimbriae/fructuronate transporter | |||||
| * | ? | CP009273 | 4537625 = | 472 (0.990) | 5 (0.010) | 4/96 | NT | 1.4% | coding (67/531 nt) | fimF | minor component of type 1 fimbriae |
| ? | CP009273 | 4537649 = | 304 (0.750) | coding (91/531 nt) | fimF | minor component of type 1 fimbriae | |||||
| * | ? | CP009273 | = 4521717 | 587 (1.240) | 4 (0.010) | 3/94 | NT | 0.75% | intergenic (‑249/+150) | sgcX/yjhY | putative endoglucanase with Zn‑dependent exopeptidase domain/pseudogene, zinc finger protein family |
| ? | CP009273 | = 4521731 | 562 (1.410) | intergenic (‑263/+136) | sgcX/yjhY | putative endoglucanase with Zn‑dependent exopeptidase domain/pseudogene, zinc finger protein family | |||||