Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A15 F2 I0 R1
|
130 |
5456.6 |
6845820 |
98.4% |
6736286 |
136.2 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
freq |
annotation |
gene |
description |
| RA |
NZ_CP022686 |
3,734,367 |
T→G |
21.8% |
F225V (TTT→GTT) |
yafD → |
endonuclease/exonuclease/phosphatase family protein |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NZ_CP022686 | 3,734,367 | 0 | T | G | 21.8%
| 186.4
/ 25.7
| 134 | F225V (TTT→GTT) | yafD | endonuclease/exonuclease/phosphatase family protein |
| Reads supporting (aligned to +/- strand): ref base T (25/78); new base G (29/2); total (54/80) |
| Fisher's exact test for biased strand distribution p-value = 2.22e-12 |
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 |
Only 100 of 134 total aligned reads displayed.
ACCACAGCGGCCCGGTCATTATGGCGGGAGATTTCAATGCCTGGAGCCGTAGAAGGATGAACGCGTTATATCGCTTTGCGCGGGAAATGTCGCTGCGCCAGGTGCGTTTTACTGATGATCAGCGCCGTCGGGCGTTTGGCCGCCCGCTCGATTTTGTTTTCTACCGTGGTCTGAACGTCAGCGAAGC‑TTCTGTACTGGTTACGCGCGCTTCCGATCACAATCCGCTACTCGTTGAATTCAGTCCCGGCAAGCCTGATAAATAAGGTATGTC > NZ_CP022686/3734233‑3734503
|
accacAGCGGCCCGGTCATTATGGCGGGAGATTTCAATGCCTGGAGCCGTATAAGGATGAACGCGTTATATCGCTTTGCGCGGGAATTGTCGCTGCGCCAGGTGCGTTTTACTGATGATCAGCGCCGTCGGGCGGTTggg > 4:318242/1‑139 (MQ=255)
accacAGCGGCCCGGTCATTATGGCGGGAGATTTCAATGCCTGGAGCCGTAGCAGGATGAACGCGTTATATCGCTTTGCGCGGGAAATGTCGCTGCGCCAGGTGCGTTTTACTGATGATCAGCGCCGTCGGGGGGTTggg > 6:295647/1‑139 (MQ=255)
accacAGCGGCCCGGTCATTATGGCGGGAGATTTCAATGCCTGGAGCCGTAGAAGGATGAACGCGTTATATCGCTTTGCGCGGGAAATGTCGCTGCGCCAGGTGCGTTTTACTGATGATCAGCGCCGTCGGGCGTTTggg > 6:690764/1‑139 (MQ=255)
aGCGGCCCGGTCATTATGGCGGGAGATTTCAATGCCTGGAGCCGTAGAAGGATGAACGCGTTATATCGCTTTGCGCGGGAAATGTCGCTGCGCCAGGTGCGTTTTACTGATGATCAGCGCCGTCGGGCGTTTGGccgccc < 7:627344/140‑1 (MQ=255)
cGGCCCGGTCATTATGGCGGGAGATTTCAATGCGTGGAGCCGTAGAAGGATGAACGCTTTATATCGCTTTGCGCGGGAAATGTCGCTGCTCCAGGTGCGTTTTACTGATGATCAGCGCCGTCGGGCGTTTTGtcgccccc > 8:77612/1‑138 (MQ=255)
cGGCCCGGTCATTATGGCGGGAGATTTCAATGCCTGGAGCCGTAGAAGGATGAACGCGTTATATCGCTTTGCGCGGGAAATGTCGCTGCGCCATGTGCGTTTTACTGATGATCAGCGCCGTCCGGCGTTTTGgcgccccg > 2:793845/1‑138 (MQ=255)
cGGCCCGGTCATTATGGCGGGAGATTTCAATGCCTGGAGCCGTAGAAGGATGAACGCGTTATATCGCTTTGCGCGGGAAATGTCGCTGCGCCAGGTGCGTTTTACTGATGATCAGCGCCGTCGGGGGTTTTGccgcccgc > 6:787852/1‑140 (MQ=255)
cGGCCCGGTCATTATGGCGGGAGATTTCAATGCCTGGAGCCGTAGAAGGATGAACGCGTTATATCGCTTTGCGCGGGAAATGTCGCTGCGCCAGGTGCGTTTTACTGATGATCAGCGCCGTCGGGCGTTTGGccgcgcgc > 5:659527/1‑140 (MQ=255)
cGGCCCGGTCATTATGGCGGGAGATTTCAATGCCTGGAGCCGTAGAAGGATGAACGCGTTATATCGCTTTGCGCGGGAAATGTCGCTGCGCCAGGTGCGTTTTACTGATGATCAGCGCCGTCGGGCGGTTGTccggccgg > 2:568672/1‑139 (MQ=255)
ggCCCGGTCATTATGGCGGGAGATTTCAATGCCTGGAGCCGTAGAAGGATGAACGCGTTATATCGCTTTGCGCGGGAAATGTCGCTGCGCCAGGTGCGTTTTACTGATGATCAGCGCCGTCGGGCGTTTGGCCGCCCGCt < 3:399332/140‑1 (MQ=255)
gCCCGGTCATTATGGCGGGAGATTTCAATGCCTGGAGCCGTAGAAGGATGAACGCGTTATATCGCTTTGCGCGGGAAATGTCGCTGCGCCAGGTGCGTTTTACTGATGATCAGCGCCGTCGGGCGTTTGGGCGCCCCCTc > 5:536936/1‑140 (MQ=255)
gCCCGGTCATTATGGCGGGAGATTTCAATGCCTGGAGCCGTAGAAGGATGAACGCGTTATATCGCTTTGCGCGGGAAATGTCGCTGCGCCAGGTGCGTTTTACTGATGATCAGCGCCGTCGGGCGGTTGGCCGACCGCTc > 4:617066/1‑140 (MQ=255)
cccGGTCATTATGGCGTCAGCTTTCAATGCCTTGAGCCGAAGAAGGATGAACGCGTAATATCGATTTGCGCGGGAAATGTCGCTGCGCCAGGTGCGAATTACTGATGATCAGCGCCGTCCTGCGGTAGGccccccacacg > 2:184911/1‑135 (MQ=255)
ccaggTCATTATGGCGGGAGATTTCAATGCCTGGAGCCGTAGAAGTATGAACGCGTTATATCGATTTGCGCGGGAAATGTCTCTGCGCCAGGTGAGTTTTACTGATGATCAGCGCCGTCGGGGGTTTTGCCCCCCCCTCg > 3:805686/4‑140 (MQ=255)
ggTCATTATGGCGGGATATTTCAATGCCTGGAGCCGTAGAAGGATTAACGCGTTATATCGCTTTGCGCGGGAAATGTCGCTGCGCCAGGTGCGTTTTACTGATGATCAGCGCCGTCGGGCGTTTGGCCGCCCGCTCGAtt < 5:442258/140‑1 (MQ=255)
tCATTAAGGCGGGAGATTTCAATGCCTGGAGCCGTAGAAGGATGAACGCGTTATATCGCTTTGCGCGGGAAATGGCGCTGCGCCAGGTGCGTTTTACTGATGATCAGCGCCGTCGGGCGTTTGGCCGCCCGCTCGAtttt < 3:204136/140‑1 (MQ=255)
aTGGCGGGAGATTTCAATGCCTGGAGCCGTAGAAGGATGAACGCGTTATATCGCTTTGCGCGGGAAATGTCGCTGCGCCAGGTGCGTTTTACTGATGATCAGCGCCGTCGGGCGTTTGGCCGCCCGCTCGATTTTGtttt < 7:796863/140‑1 (MQ=255)
aTGGCGGGAGATTTCAATGCCTGGAGCCGTAGAAGGATGAACGCGTTATATCGCTTTGCGCGGGAAATGTCGCTGCGCCAGGTGCGTTTTACTGATGATCAGCGCCGTCGGGCGTTTGGCCGCCCGCTCGATTTTGtttt < 5:339094/140‑1 (MQ=255)
aTGGCGGGAGATTTCAATGCCTGGAGCCGTAGAAGGATGAACGCGTTATATCGCTTTGCGCGGGAAATGTCGCTGCGCCAGGTGCGTTTTACTGATGATCAGCGCCGTCGGGCGTTTGGCCGCCCGCTCGATTTTGtttt < 5:441672/140‑1 (MQ=255)
gCGGGAGATTTCAATGCCTGGAGCCGTAGAAGGATGAACGCGTTATATCGCTTTGCGCGGGAAATGTCGCTGCGCCAGGTGCGTTTTACTGATGATCAGCGCCGTCGGGCGTGTGGGCGCCCCCTAGATTTTTGTTTCtt > 6:8860/1‑139 (MQ=255)
cGGGAGATTTCAATGCCTGGAGCCGTAGAAGGATGAACGCGTTATATCGCTTTGCGCGGGAAATGTCGCTGCGCCAGGTGCGTTTTACTGATGATCAGCGCCGTCGGGGGGTTGGCCGCCCGCGCGGGttttttttgtta > 4:849063/1‑136 (MQ=255)
cGGGAGATTTCAATGCCTGGAGCCGTAGAAGGATGAACGCGTTATATCGCTTTGCGCGGGAAATGTCGCTGCGCCAGGTGCGTTTTACTGATGATCAGCGCCGTCGGGCGGTTGGCCGCCCGCGCGATTTTGTTTTGTaa > 6:666140/1‑139 (MQ=255)
gggAGATTTCAATGCCTGGAGCCGTAGAAGGATGAACGCGTTATATCGCTTTGCGCGGGAAATGTCGCTGCGCCAGGTGCGTTTTACTGATGATCAGCGCCGTCGGGCGTTTGGCCGCCCGCTCGATTTTGTTTTCTAcc < 8:478758/140‑1 (MQ=255)
ggAGATTTCTATGCCTGGAGCCGTAGAAGGATGAACGCGTTATATCGCTTTGCGCGGGAAATGTCGCTGCGCCAGGTGCGTTTTACTGATGATCAGCGCCGTCGGGCGTTTGGCCGCCCGCTCGATTTTGTTTTCTACCg < 3:586056/140‑1 (MQ=255)
ggAGATTTCAATGCCTGGAGCCGTAGAAGGATGAACGCGTTATATCGCTTTGCGCGGGAAATGTCGCTGCGCCAGGTGCGTTTTACTTATGATCAGCGCCGTGGGGCGTTTGGCCGCACGCTCGATTTTGTTTTCTACCg < 3:726099/140‑1 (MQ=255)
ggAGATTTCAATGCCTGGAGCCGTAGAAGGATGAACGCGTTATATCGCTTTGCGCGGGAAATGTCGCTGCGCCAGGTGCGTTTTACTGATGATCAGCGCCGTCGGGGCGGTGGGGGCCCGCTCGCATTTGttttgttacg > 1:848084/1‑134 (MQ=255)
ggAGATTTCAATGCCTGGAGCCGTAGAAGGATGAACGCGTTATATCGCTTTGCGCGGGAAATGTCGCTGCGCCAGGTGCGTTTTACTGATGATCAGCGCCGTCGGGCGTTTGGCCGCCCGCTCGATTTTGTTTTCTACCg < 5:440807/140‑1 (MQ=255)
gagaTTTCAATGCCTGGAGCCGTAGAAGGATGAACGCGTTATATCGCTTTGCGCGGGAAATGTCGCTGCGCCAGGTGCGTTTTACTGATGATCAGCGCCGTCGGGCGTTTGGGCGCCCGGGCGATttttttttattacct > 6:541636/1‑133 (MQ=255)
aaTGCCTGGAGCCGGAGAAGGATGAACGCGTTATATCGCTTTGCGCGGGAAATGGCGCTGCGCCAGGTGCGTTTTACTGATGATCAGCGCCGTCGGGCGTTTGGCCGCCCGCTCGATTTTGTTTTCTACCGTGGGCTGaa < 3:774050/140‑1 (MQ=255)
gCCTGGAGCAGTAGAAGGATGAACGCGTTATATCGCTTTGCGCGGGAAATGTCGCTGCGCCAGGTGCGTTTTACTGATTATCAGCGCCGTCGGGCGTTTGGCCGCCCGCTCGATTTTGTTTTCTACCGTGGTCTGAACGt < 3:277713/140‑1 (MQ=255)
ggAGCCGTAGAAGGATGAACGCGTTATATCGCTTTGCGCGGGAAATGTCGCTGCGCCAGGTGCGTTTTACTGATGATCAGCGCCGTCGGGCGGTTGGGCGCCCCCGCGCTTTTTTTTTGTAACGGGGTGTGAACGTCAGc > 3:695442/1‑140 (MQ=255)
ggAGCCGTAGAAGGATGAACGCGTTATATCGCTTTGCGCGGGAAATGTCGCTGCGCCAGGTGCGTTTTACTGATGATCAGCGCCGTCGGGCCGTTTGCCGCCCGCAAGCTATTTTTTTGTAACGAGGTCAGAACGTAAGc > 1:851567/1‑140 (MQ=255)
cgCCGTAGAAGGCTGAACGCGTTATATCGCTTTGCGCGGGAAATGGCGCTGCGCCAGGTGCGTTTTACTGATGATCAGCGCCGTCGGGCGTTTGGCCGCCCGCTCGAGTTTGTTTTCTACCGTGGTCTGAACGTCAGCGa < 8:491568/139‑1 (MQ=255)
aGCCGTAGAATGATGAACGCGTTATATCGCTTTGCGCGGGAAATGTCGCTGCGCCAGGTGCGTTTTACTGATGATCAGCGCCGTCGGGCGTTTGGCCGCCCGCTCGATTTTGTTTTCTACCGTGGTCTGAACGTCAGCGa < 2:502585/140‑1 (MQ=255)
aGCCGTAGAAGGATGAACGCGTTATATCGCTTTGCGCGGGAAATGTCGCTGCGCCAGGTGCGTTTTACTGATGATCAGCGCCGTCGGGCGTTTGGCCGCCCGCTCGATTTTGTTTTCTACCGTGGTCTGAACGTCAGCGa < 3:140655/140‑1 (MQ=255)
aGCCGTAGAAGGATGAACGCGTTATATCGCTTTGCGCGGGAAATGTCGCTGCGCCAGGTGCGTTTTACTGATGATCAGCGCCGTCGGGCGTTTGGCCGCCCGCTCGATTTTGTTTTCTACCGTGGTCTGAACGTCAGCGa < 5:681453/140‑1 (MQ=255)
aGCCGTAGAAGGATGAACGCGTTATATCGCTTTGCGCGGGAAATGTCGCTGCGCCAGGTGCGTTTTACTGATGATCAGCGCCGTCGGGCGTTTGGCCGCCCGCTCGATTTTGTTTTCTACCGTGGTCTGAACGTCAGCGa < 4:698212/140‑1 (MQ=255)
aGCCGTAGAAGGATGAACGCGTTATATCGCTTTGCGCGGGAAATGTCGCTGCGCCAGGTGCGTTTTACTGATGATCAGCGCCGTCGGGCGTTTGGCCGCCCGCTCGATTTTGTTTTCTACCGTGGTCTGAACGTCAGCGa < 8:208432/140‑1 (MQ=255)
aGCCGTAGAAGGATGAACGCGTTATATCGCTTTGCGCGGGAAATGTCGCTGCGCCAGGTGCGTTTTACTGATGATCAGCGCCGTCGGGCGTTTGGCCGCCCGCTCGATTTTGTTTTCTACCGTGGTCTGAACGTCAGCGa < 6:23883/140‑1 (MQ=255)
aGCCGTAGAAGGATGAACGCGTTATATCGCTTTGCGCGGGAAATGTCGCTGCGCCAGGTGCGTTTTACTGATGATCAGCGCCGTCGGGCGTTTGGCCGCCCGCTCGATTTTGTTTTCTACCGTGGTCTGAACGTCAGCGa < 3:637292/140‑1 (MQ=255)
aGCCGTAGAAGGATGAACGCGTTATATCGCTTTGCGCGGGAAATGTCGCTGCGCCAGGTGCGTTTTACTGATGATCAGCGCCGTCGGGCGTTTGGCCGCCCGCTCGATTTTGTTTTCTACCGTGGTCTGAACGTCAGCGa < 8:454144/140‑1 (MQ=255)
ccGTAGAAGGATGAACGCGTTATATCGCTTTGCGCGGGAAATGTCGCTGCGCCAGGTGCGTTTTACTGATGATCAGCGCCGTCGGGCGTTTGGCCGCCCGCTCGATTTTGTTTTCTACCGTGGTCTGAACGTCAGCGAAg < 5:712890/140‑1 (MQ=255)
tAGAAGGATGAACGCGTTATATCGCTTTGCGCGGGAAATGTCGCTGCGCCAGGTGCGTTTTACTGATGATCAGCGCCGTCGGGGGGGTGGGCGCCCCCGCGATTTTTTTTTGTAACGGGGGGTGAACATACGCGAAGC‑tg > 4:65726/1‑139 (MQ=255)
tAGAAGGATGAACGCGTTATATCGCTTTGCGCGGGAAATGTCGCTGCGCCAGGTGCGTTTTACTGATGATCAGCGCCGTCGGGCGTTTTGGCGCCCGGGCGGTTTTGTTTTGTAACCTGGGGTGGAAGTCAGCGAAGcat > 6:512256/1‑138 (MQ=255)
tAGAAGGATGAACGCGTTATATCGCTTTGCGCGGGAAATGTCGCTGCGCCAGGTGCGTTTTACTGATGATCAGCGCCGTCGGGCGTTTGGCCGCCCGCTCGATTTTGTTTTCTACCGTGGTCTGAACGTCAGCGAAGC‑tt < 1:358774/140‑1 (MQ=255)
tAGAAGGATGAACGCGTTATATCGCTTTGCGCGGGAAATGTCGCTGCGCCAGGTGCGTTTTACTGATGATCAGCGCCGTCGGGCGGTTGGCCGCCCCCTCGATTTTTTTTTATACCGTGGTCTGAAACTCAGCGAAgagt > 1:353642/1‑137 (MQ=255)
tAGAAGGATGAACGCGTTATATCGCTTTGCGCGGGAAATGTCGCTGCGCCAGGTGCGTTTTACTGATGATCAGCGCCGTCGGGCGGTTGGCCGCCCCCGCGCTTTTTTTTTATTCCGGGGTGAGAACGTAAGCGAAGcgt > 3:16465/1‑138 (MQ=255)
gaGAAGGATGAACGCGTAATATCGCTTTGCGCGGGAAATGTCGCTGCGCCAGGGCCGTTTTACTGATGATCAGCGCCGTCGCGGGTGTGGCCGCCCGCCGCATTTTGTTTTTTTCGATGGTCTGCTCATCAGCGAAGC‑tg > 7:184514/2‑139 (MQ=255)
ggATGAACGCGTTATATCGCTTTGCGCGGGTAATGTCGCTGCGCCAGGTGCGTTTTACTGATGATCAGCGCCGTCGGGCGTTTGGCCGCCCGCTCGATTTTGTTTTCTACCGTGGGCTGAACGTCAGCGAAGC‑TTCTGTa < 8:580620/140‑1 (MQ=255)
aaCGCGTTATATCGCTTTGCGCGGGAAATGTCGCTGCGCCAGGTGCGTTTTACTGATGATCAGCGCCGTGGGGGGGTTGGGCGCCCGGCCGATGTTTTTTTTTTACGTGGTGTGATCAGCAGCGAAGC‑TTCTGTTCTGGt > 3:559240/1‑140 (MQ=255)
aaCGCGTTATATCGCTTTGCGCGGGAAATGTCGCTGCGCCAGGTGCGTTTTACTGATGATCAGCGCCGTCGGGGGGTTGGGCGGCCGCGCGCTTTTGTTTTATTCCGTGGTCTGAACGTCAGCGCAGC‑TTCTGTAcgagg > 2:164142/1‑136 (MQ=255)
cgTTATATCGCTTTGCGCGGGAAATGTCGCTGCGCCAGGTGCGTTTTACTGATGATCAGCGCCGTCGGGCGGGTGGCCGCCCGCGCGAGTTTTTTTTATAACGGGGGCTGAACGTCAGCCACGC‑GGATGGACTTGTTAcg > 6:769995/1‑140 (MQ=255)
gTTATATCGCTTTGCGCGGGAAATGTCGCTGCGCCAGGTGCGTTTTACTGATGATCAGCGCCGTCGGGGGGTTGGGCGCCCGCGCGCGTTTGTTTTAGACCCTGGGCTGAACCTCAGCGCAGC‑ATGTGTTAGGGTTActc > 7:101188/1‑138 (MQ=255)
ttATATCGCTTTGCGCGGGAAATGTCGCTGCGCCAGGTGCGTTTTACTGATGATCAGCGCCGTCGGGCGTTTGGCCGCCCGCTGGATTTTTTTTTATACCGTGGTCTGAACGTCAGCGAATC‑TTCAGTTATGGTTAcgcg > 4:798768/1‑140 (MQ=255)
ttATATCGCTTTGCGCGGGAAATGTCGCTGCGCCAGGTGCGTTTTACTGATGATCAGCGCCGTCGGGCGTTTGGCCGCCCGCTCGATTTTGTTTTCTACCGTAGTCTGAACGTCAGCGAAGC‑TTCTGTACTGGTTAcgcg < 7:201801/140‑1 (MQ=255)
ttATATCGCTTTGCGCGGGAAATGGCGCTGCGCCAGGTGCGTTTTACTGATGATCAGCGCCGTCGGGCGTTTGGCCGCCCGCTCGATTTTGTTTTCTACCGTGGTCTGAACGTCAGCGAAGC‑TTCTGTACTGGTTAcgcg < 4:391387/140‑1 (MQ=255)
tataTCGCTTTGCGCGGGAAATGTCGCTGCGCCAGGTGCGTTTTACTGATGATCAGCGCCGTCGGGCGGTTGGGCGCCCGCGCGACGTTTTTTTTTTACGTGGTGTGGACCTGATCGAAGC‑TTATGTAGTTGTTTcgcgc > 1:406882/1‑140 (MQ=255)
atatCGCTTTGCGCGGGAAATGTCGCTGCGCCAGGTGCGTTTTACTGATGATCAGCGCCGTCGGGCGTTTGGCCGCCCGCTCGATTTTGTTTTCTACCGTGGTCTGAACGTCAGCGAAGC‑TTCTGTACTGGTTAcgcgcg < 8:566963/140‑1 (MQ=255)
atatCGCTTTGCGCGGGAAATGTCGCTGCGCCAGGTGCGTTTTACTGATGATCAGCGCCGTCGGGCGTTTGGCCGCCCGCTCGATTTTGTTTTCTACCGTGGTCTGAACGTCAGCGAAGC‑TTCTGTACTGGTTAcgcgcg < 7:138304/140‑1 (MQ=255)
atatCGCTTTGCGCGGGAAATGGCGCTGCGCCAGGTGCGTTTTACTGATGATCAGCGCCGTCGGGCGTTTGGCCGCCCGCTCGATTTTGTTTTCTACCGTGGTCTGAACGTCAGCGAAGC‑TTCTGTACTGGTTAcgcgcg < 1:444502/140‑1 (MQ=255)
cTTTGCGCGGGAAATGTCGCTGCGCCAGGTGCGTTTTACTGATGATCAGCGCCGTGGGGGGGTTTGCCGGCCGCGGCAGTTTTTTTTGTAACCTGGTGTGAACGTCAGCGAAGC‑TACAGTAATGGGTTAGCGCGCTTCCg > 6:811275/1‑140 (MQ=255)
cTTTGCGCGGGAAATGTCGCTGCGCCAGGTGCGTTTTACTGATGATCAGCGCCGTCGGGCGTTTGGCCTCCCGCGCGATTTTGTTTTATACCGTGGTATGAACGTCAGCGAAGC‑TTCTGTACTGGTTACGCGCGCTTCCg > 7:506839/1‑140 (MQ=255)
cTTTGCGCGGGAAATGTCGCTGCGCCAGGTGCGTTTTACTGATGATCAGCGCCGTCGGGCGGTTGGGGGCCCCCGCGCTTTTGTTTTGTAACGGGGGTGGGACGTCAGCCAAGC‑GTATGTAAGGGTTACGCGCGCGTccc > 4:525839/1‑139 (MQ=255)
ttGCGGGGGAAATGGCGCTGCGCCAGGTGCGGTTTACTGATGATCAGCGCCGGCGGGCGTTTGGCCGCCCGCTCGATTTTGTTTTCTACCGTGGTCTGAACGTCAGCGAAGC‑TTCTGTACTGGTTACGCGCGCTTCCGAt < 8:501292/140‑1 (MQ=255)
tGCGCGGGAAATGTCGCTGCGCCAGGTGCGTTTTACTGATGATCAGCGCCGTCGGGGGTTTGGCCGCCCGCGCGCTTTTGGTTTGTTACGTGGGGTGAGCGGCCGCGAAGCGTAGTGT‑CTGGGTACGCGCGCGGCCGagc > 6:87191/1‑138 (MQ=255)
gcgcGGGAAATGTCGCTGCGCCAGGTGCGTATTACTGATGATCAGCGCCGTCGGGCGTTTGGCCGCCCGCTCGATTTTGTTTTCTACCGTGGTCTGACCGTCAGCGAAGC‑TTCTGTACTGGTTACGCGCGCTTCCGATca < 4:736829/140‑1 (MQ=255)
cgcgGGAAATGTCGCTGCGCCAGGTGCGTTTTACTGATGATCAGCGCCGTCGGGCGGTTGGCCGCCCGCTCGATTTTGTTTTATACCCTGGGGTGAACGTCAGCGAAGC‑GTCTGTACGGGTTAAGCGCGCTTCCGATcac > 3:491356/1‑140 (MQ=255)
gcgGGAAATGTCGCTGCGCCAGGTGCGTTTTACTGATGATCAGCGCCGTCGGGCGTTTGGCCGCCCGCTCGATTTTGTTTTCTACCGTGGTCTGAACGTCAGCGAAGC‑TTCTGTACTGGTTACGCGCGCTTCCGATcaca < 2:456700/140‑1 (MQ=255)
gAAATGTCGCTGCGCCAGGTGCGTTTTACTGATGATCAGCGCCGTCGGGCGTTTGGCCGCCCGCGCGATTTTTTTTTATACCCTGGTCTGAACGTCAACGAAGC‑GTCAGGACTGGTTACGCGCGCTGCCGCGAACAATcc > 2:816527/1‑140 (MQ=255)
aaaTGTCGCTGCGCCAGGTGCGGTTTACTGATGATCAGCGCCGTCGGGCGTTTGGCCGCCCGCTCGATTTTGTTTTCTACCGTGGTCTGAACGTCAGCGAAGC‑TTCTGTACTGGTTACGCGCGCTTCCGATCACAATCCg < 1:645346/140‑1 (MQ=255)
gTCGCTGCGCCAGGTGCGTTTTACTGATGATCAGCGCCGTCGGGCGTTTGGCCGCCCGCTCGATTTTGTTTTCTACCGTGGGCTGAACGTCAGCGAAGC‑TTCTGTACTGGTTACGCGCGCTTCCGATCACAATCCGCTAc < 2:49519/140‑1 (MQ=255)
gTCGCTGCGCCAGGTGCGTTTTACTGATGATCAGCGACGTCGGGCGTTTGGCCGCACGCTCGATTTTGTTTTCTACCGTGGTCTGAACGTCAGCGAAGC‑TTCTGTACTGGTTACGCGCGCTTCCGATCACAATCCGCTAc < 2:23712/140‑1 (MQ=255)
cAGGTGCGTTTTACTGATGATCAGCGCCGTCGGGCGTTTGGCCGCCCGCTCGATTTTGTTTTCTACCGTGGTCTGAACGTCAGCGAAGC‑TTCTGTACTGGTTACGCGCGCTTCCGATCACAATCCGCTACTCGTTGAAtt < 8:191710/140‑1 (MQ=255)
cAGGTGCGTTTTACTGATGATCAGCGCCGTCGGGCGTTTGGCCGCCCGCTCGATTTTGTTTTCTACCGTGGTCTGAACGTCAGCGAAGC‑TTCTGTACTGGTTACGCGCGCTTCCGATCACAATCCGCTACTCGTTGAAtt < 8:319106/140‑1 (MQ=255)
cAGGTGCGTTTTACTGATGATCAGCGCCGTCGGGCGTTTGGCCGCCCGCTCGATTTTGTTTTCTACCGTGGTCTGAACGTCAGAGAAGC‑TTCTGTACTGGTTACGCGCGCTTCCGATCACAATCCGCTACTCGTTGAAtt < 3:789631/140‑1 (MQ=255)
ttttACTGATGATCAGCGCCGTCGGGCGTTTGGCCGCCCCCGCGATTTTGTTTTCTACCGAGGGCTGAACGTCAGCGCAGC‑GTCTGTACTGGGTTCGCGCGCGTCCGATGACAAACCGCGACTCGTTGAATTAAGTcccc > 8:591548/1‑139 (MQ=255)
ttACTGATGATCAGCGCCGTCGGGCGTTTGGCCGCCCGCTCGATTTTGTTTTCTACCGTGGTCTGAACGTCAGCGAAGC‑TTCTGTACTGGTTACGCGCGCTTCCGATCACAATCCGCTACTCGTTGAATTCAGTCCCGGc < 1:264438/140‑1 (MQ=255)
ttACTGATGATCAGCGCCGTCGGGCGTTTGGCCGCCCGCTCGATTTTGTTTTCTACCGTGGTCTGAACGTCAGCGAAGC‑TTCTGTACTGGTTACGCGCGCTTCCGATCACAATCCGCTACTCGTTGAATTCAGTCCCGGc < 4:404646/140‑1 (MQ=255)
aCTGATGATCAGCGCCGTCGGGCGTTTGGCCGCCCGCTCGATTTTGTTTTCTACCGTGGTCTGAACGTCAGCGAAGC‑TTCTGTACTGGTTACGCGCGCTTCCGATCACAATCCGCTACTCGTTGAATTCAGTCCCGGCaa < 2:807507/140‑1 (MQ=255)
aCTGATGATCAGCGCCGTCGGGCGTTTGGCCGCCCGCTCGATTTTGTTTTCTACCGTGGTCTGAACGTCAGCGAAGC‑TTCTGTACTGGTTACGCGCGCTTCCGATCACAATCCGCTACTCGTTGAATTCAGTCCCGGCaa < 3:803730/140‑1 (MQ=255)
tgatgaTCAGCGCCGTCGGGCGTTTGGCCGCCCGCTCGATTTTGTTTTCTACCGTGGTCTGAACGTCAGCGAAGC‑TTCTGTACTGGTTACGCGCGCTTCCGATCACAATCCGCTACTCGTTGAATTCAGTCCCGGCAAGc < 1:115832/140‑1 (MQ=255)
tgatCAGCGCCGTCGGGCGTTTTGCCGCCCTCTCGATTTTGTTTTCTACCGTGGTCTGATCGTCAGCGATGC‑TTCTGTACTGGTTACGCGCGCTTCCGATCACAATCCGCTACTCGTTGAATTCAGTCCCGGCAAGCCTg < 7:453861/140‑1 (MQ=255)
tgatCAGCGCCGTCGGGCGTTTGGCCGCCCGCTCGATTTTGTTTTCTACCGTGGTCTGAACGTCAGCGAAGC‑TTCTGTACTGGTTACGCGCGCTTCCGATCACAATCCGCTACTCGTTGAATTCAGTCCCGGCAAGCCTg < 3:553331/140‑1 (MQ=255)
aGCGCCGTCGGGCGTTTGGCCGCCCGCTCGATTTTGTTTTCTACCGTGGTCTGAACGTCAGCGAAGC‑TTCTGTACTGGTTACGCGCGCTTCCGATCACAATCCGCTACTCGTTGAATTCAGTCCCGGCAAGCCTGataaa < 1:304697/140‑1 (MQ=255)
gcgcCGTCGGGCGTTTGGGCGCCCGCTCGGGTTTTTTTTATTCCGGGGGCTGAACGTCCGCGAAGC‑GTATGTAATGGTTACGCGCGCGTACGCTACCCAAACGCGACTCGTTTGATTAAATCCCCGCCAGCCGGataaat > 4:543951/1‑140 (MQ=255)
gcgcCGTCGGGCGTTTGGCCGCCCGCTCGATTTTGTTTTCTACCGTGGTCTGAACGTCAGCGAAGC‑TTCTGTACTGGTTACGCGCGCTTCCGATCACAATCCGCTACTCGTTGAATTCAGTCCCGGCAAGCCTGataaat < 5:270998/140‑1 (MQ=255)
gcCGTCGGGCGTTTGGCCGCCCGCTCGATTTTGTTTTCTACCGTGGTCTGAACGTCAGCGAAGC‑TTCTGTACTGGTTACGCGCGCTTCCGATCACAATCCGCTACTCGTTGAATTCAGTCCCGGCAAGCCTGataaataa < 2:306790/140‑1 (MQ=255)
gcCGTCGGGCGTTTGGCCGCCCGCTCGATTTTGTTTTCTACCGTGGTCTGAACGTCAGCGAAGC‑TTCTGTACTGGTTACGCGCGCTTCCGATCACAATCCGCTACTCGTTGAATTCAGTCCCGGCAAGCCTGataaataa < 6:26382/140‑1 (MQ=255)
gcCGTCGGGCGGTTGGCCGCCCGCTCGATTTTGTTTTCTACCGTGGTCTGAACGTCAGCGAAGC‑TTCTGTACTGGTTACGCGCGCTTCCGATCACAATCCGCTACTCGTTGAATTCAGTCCCGGCAAGCCTGataaataa < 3:249322/140‑1 (MQ=255)
ccGTCGGGCGTTTGGCCGCCCGCTCGATTTTGTTTTCTACCGTGGTCTGAACGTCAGCGAAGC‑TTCTGTACTGGTTACGCGCGCTTCCGATCACAATCCGCTACTCGTTGAATTCAGTCCCGGCAAGCCTGATAAATAAg < 8:304822/140‑1 (MQ=255)
ccGTCGGGCGTTTGGCCGCCCGCTCGATTTTGTTTTCTACCGTGGTCTGAACGTCAGCGAAGC‑TTCTGTACTGGTTACGCGCGCTTCCGATCACAATCCGCTACTCGTTGAATTCAGTCCCGGCAAGCCTGATAAATAAg < 1:367886/140‑1 (MQ=255)
ccGTCGGGCGTTTGGCCGCCCGCTCGATTTTGTTTTCTACCGTGGTCTGAACGTCAGCGAAGC‑TTCTGTACTGGTTACGCGCGCGTCCGATCACAATCCGCTACTCGTTGAATTCAGTCCCGGCAAGCCTGATAAAAAAg < 3:814081/140‑1 (MQ=255)
cGTCGGGCGTTTGGCCGCCCGCTCGATTTTGTTTTCTACCGTGGTCTGAACGTCAGCGAAGC‑TTCTGTACTGGTTACGCGCGCTTCCGATCACAATCCGCTACTCGTTGAATTCAGTCCCGGCAAGCCTGATAAATAAgg < 2:479057/140‑1 (MQ=255)
cGTCGGGCGTTTGGCAGCCCGCTCGATTTTGTTTTCTACCGTGGTCTGAACGTCAGCGAAGC‑TTCTGTACTGGTTACGCGCGCTTCCGATCACAATCCGCTACTCGTTGAATTCAGTCCCGGCAAGCCTGATAAATAAgg < 8:781397/140‑1 (MQ=255)
gCGTTTGGCCGCGCGCTCGATTTTGTTTTCTACCGTGGTCTGAACGTCAGCGAAGC‑TTCTGTACTGGTTACGCGCGCTTCCGATCACAATCCGCTACTCGTTGAATTCAGTCCCGGCAAGCCTGATAAATAAGGTATGTc < 6:659527/140‑1 (MQ=255)
gCGTTTGGCCGCCCGCTCGATTTTGTTTTCTACCGTGGTCTGAACGTCAGCGAAGC‑TTCTGTACTGGTTACGCGCGCTTCCGATCACAATCCGCTACTCGTTGAATTCAGTCCCGGCAAGCCTGATAAATAAGGTATGTc < 5:295647/140‑1 (MQ=255)
gCGTTTGGCCGCCCGCTCGATTTTGTTTTCTACCGTGGTCTGAACGTCAGCGAAGC‑TTCTGTACTGGTTACGCGCGCTTCCGATCACAATCCGCTACTCGTTGAATTCAGTCCCGGCAAGCCTGATAAATAAGGTATGTc < 2:270408/140‑1 (MQ=255)
gCGTTTGGCCGCCCGCTCGATTTTGTTTTCTACCGTGGTCTGAACGTCAGCGAAGC‑TTCTGTACTGGTTACGCGCGCTTCCGATCACAATCCGCTACTCGTTGAATTCAGTCCCGGCAAGCCTGATAAATAAGGTATGTc < 5:666140/140‑1 (MQ=255)
gCGTTTGGCCGCCCGCTCGATTTTGTTTTCTACCGTGGTCTGAACGTCAGCGAAGC‑TTCAGTACTGGTTACGCGCGCTTCCGATCACAATCCGCTACTCGTTGAATTCAGTCCCGGCAAGCCTGATAAATAAGGTATGTc < 6:441383/140‑1 (MQ=255)
gCGGTTGGCCGCCCGCTCGATTTTGTTTTCTACCGTGGTCTGAACGTCAGCGAAGC‑TTCTGAACTGGTTACGCGCGCTTCCGATCACAATCCGCTACTCGTTGAATTCAGTCCCGGCAAGCCTGATAAATAAGGTATGTc < 5:514587/140‑1 (MQ=255)
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ACCACAGCGGCCCGGTCATTATGGCGGGAGATTTCAATGCCTGGAGCCGTAGAAGGATGAACGCGTTATATCGCTTTGCGCGGGAAATGTCGCTGCGCCAGGTGCGTTTTACTGATGATCAGCGCCGTCGGGCGTTTGGCCGCCCGCTCGATTTTGTTTTCTACCGTGGTCTGAACGTCAGCGAAGC‑TTCTGTACTGGTTACGCGCGCTTCCGATCACAATCCGCTACTCGTTGAATTCAGTCCCGGCAAGCCTGATAAATAAGGTATGTC > NZ_CP022686/3734233‑3734503
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| Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
N/A
