Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A9 F2 I0 R1
|
193 |
6708.0 |
8620653 |
98.5% |
8491343 |
136.3 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
freq |
annotation |
gene |
description |
| RA |
NZ_CP022686 |
1,633,846 |
T→G |
30.4% |
N253T (AAC→ACC) |
yqeB ← |
selenium‑dependent molybdenum cofactor biosynthesis protein YqeB |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NZ_CP022686 | 1,633,846 | 0 | T | G | 30.4%
| 166.6
/ 53.8
| 183 | N253T (AAC→ACC) | yqeB | selenium‑dependent molybdenum cofactor biosynthesis protein YqeB |
| Reads supporting (aligned to +/- strand): ref base T (46/79); new base G (55/3); total (101/82) |
| Fisher's exact test for biased strand distribution p-value = 4.75e-15 |
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 |
Only 100 of 185 total aligned reads displayed.
CACTTCCAACATGATCACTTTAAAACCCGCATGATACAGACGTAGCGCTACACCACTGGCGATATCCCCCGCACCGCGAATCACCACCAGCTGGTGTCCGGAAGGATGAGAAGGCTTCATCATCAACCCACCCGGCGCGTTATTTTTCACCTGTAATATTTCTGCCAGCACGCTAATGGCGATCTCCTGCGGCGTTTCCGCACCTATGTTGTAACCAACGGGCGCATGTAAACGGGCAATATGTTCTTCAGCCACGCCTTTCTCACGCAATTGGC > NZ_CP022686/1633707‑1633981
|
cACTTCCAACATGATCACTTTAAAACCCGCATGATACAGACGTAGCGCTACACCACTGGCGATATCCCCCGCACCGCGAATCACCACCAGCTGGTGTCCGGAAGGATGAGAAGGCTTCATCATCAACCCACCCGGCGCGt < 3:279614/140‑1 (MQ=255)
tCCAACATGATCACTTTAAAACCCGCATGATACAGACGTAGCGCTACACCACTGGCGATATCCCCCGCACCGCGAATCACCACCAGCTGGTGTCCGGAAGGATGAGAAGGCTTCATCATCAACCCACCCGGCGCGGTAtt > 6:531766/1‑140 (MQ=255)
caCATGATCACATTAAAACCCGCCTGCTCCAGACGTAGCGCTACACCACTGGCGATATCCCCCGCACCGCGAATCACCACCAGCTGGTGTCCGGAAGGATGAGAAGGCGTCATCATCAACCCACCCGGCGCGTTAttttt < 7:157942/139‑1 (MQ=255)
aTGATCACTTTAAAACCCGCATGATACAGACGTAGCGCTACACCACTGGCGATATCCCCCGCACCGCGAATCACCACCAGCTGGTGTCCGGAAGGATGAGAAGGCTTCATCATCAACCCACCCGGCGCGTTATTTTTCAc < 1:558387/140‑1 (MQ=255)
aTCACTTTAAAACCCGCATGATACAGACGTAGCGCTACACCACTGGCGATATCCCCCGCACCGCGAATCACCACCAGCTGGTGTCCGGAAGGATGAGAAGGCTTCATCATCAACCCACCCGGCGCGTTTTTTTTAACCTg > 4:903966/1‑140 (MQ=255)
aTCACTTTAAAACCCGCATGATACAGACGTAGCGCTACACCACTGGCGATATCCCCCGCACCGCGAATCACCACCAGCTGGTGTCCGGAAGGATGAGAAGGCTTCATCATCAACCCACCCGGCGCGGTAtttttaagcag > 1:961727/1‑134 (MQ=255)
cTTTAAAACCCGCATGATACAGACGTAGCGCTACACCACTGGCGATATCCCCCGCACAGCGAATCACCACCATCTGGTGTCCGGAAGGATGAGAAGGCTTCATCATAAACCCACCCGGCGCGGTATTTTTCACATGTAat > 3:469602/1‑140 (MQ=255)
cTTTAAAACCCGCATGATACAGACGAAGCGCTACACCACTGGCGATATCCCCCGCACCGCGAATCACCACCAGCTGTTGTACTGAAGGATGAGAAGGCTTAAACATCAACCCACCCGTCCCGGTATTTTTCACGAGTAat > 8:412303/1‑140 (MQ=255)
tttAAAACCCGCATGATACAGACGTAGCGCTACACCACTGGCGATATCCCCCGCACAGCGAATCACCACCAGCTGATGTCCGGAAGGATGAGAAGGCTTCATCATCAACCCCCCCGGCGCGTGATTTTTAACCTGTAata > 5:468909/1‑140 (MQ=255)
tAAAACCCGCATGATACAGACGTAGCGCTACACCACTGGCGATATCCCCCGCACCGCGAATCACCACCAGCTGGTGTCCGGAAGGATGAGAAGGCTTCATCATCAACCCACCCGGCGCGTTATTTTTCACCTGTAATAtt > 1:1009775/1‑140 (MQ=255)
accacGCATTATTCAGACCTAGCGCTAACCCACTGGCGATCTCCACCGCACCGCGACTCACCACCAGCTGGTTTACGGAAGGATGAGAAGGCTTGATCATCTACCCTCCCGGCGCGGTATTTTTCACCTGTAATATTTCt < 7:1021142/136‑1 (MQ=255)
gCATGATCCAGACGTAGCGCTACACCACTGGCGATATCCCCCGCACCGCGAATCCCCACCAGCTGGTGTCCGGAAGGATGAGAAGGCTTCATCATCAACCCACCCGGCGCGTTATTTTTCACCTGTAATATTTCTGCCAg < 6:958969/140‑1 (MQ=255)
gCATGATACAGACGTAGCGCTACACCACTGGCGCTATCCCCCGCACCGCGAATCACCACCAGCTGGTGTCCGGAAGGATGAGAAGGCTTCATCATCAACCCACCCGGCGCGTTATTTTTCACCTGTAATATTTCTGCCAg < 1:726420/140‑1 (MQ=255)
gCATGATACAGACGTAGCGCTACACCACTGGCGATATCCCCCGCACCGCGAATCACCACCAGCTGGTGTCCGGAAGGATGAGAAGGCTTCATCATCAACCCCCCCGGCGCGTTTTTTTTAACCTGTAATATTTCTGCCac > 8:221906/1‑139 (MQ=255)
gCATGATACAGACGTAGCGCTACACCACTGGCGATATCCCCCGCACCGCGAATCACCACCAGCTGGTGTCCGGAAGGATGAGAAGGCTTCATCATCAACCCACCCGGCGCGTTATTTTTCACCTGTAATATTTCTGCCAg < 7:447512/140‑1 (MQ=255)
gCATGATACAGACGTAGCGCTACACCACTGGCGATATCCCCCGCACCGCGAATCACCACCAGCTGGTGTCCGGAAGGATGAGAAGGCTTCATCATCAACCCACCCGGCGCGTTATTTTTCACCTGTAATATTTCTGCCAg < 3:1051126/140‑1 (MQ=255)
gCATGATACAGACGTAGCGCTACACCACTGGCGATATCCCCCGCACCGCGAATCACCACCAGCTGGTGTCCGGAAGGATGAGAAGGCTTCATCATCAACCCACCCGGCGCGTTATTTTTCACCTGTAATATTTCTGCCAg < 2:520495/140‑1 (MQ=255)
gCATGATACAGACGTAGCGCTACACCACTGGCGATATCCCCCGCACCGCGAATCACCACCAGCTGGTGTCCGGAAGGATGAGAAGGCTTCATCATCAACCCACCCGGCGCGTTATTTTTCACCTGTAATATTTCTGCCAg < 6:245306/140‑1 (MQ=255)
gCATGATACAGACGTAGCGCTACACCACTGGCGATATCCCCCGCACCGCGAATCACCACCAGCTGGTGTCCGGAAGGATGAGAAGGCTTCATCATCAACCCACCCGGCGCGTTATTTTTCACCTGTAATATTTCTGCCAg < 4:494215/140‑1 (MQ=255)
gCATGATACAGACGTAGCGCTACACCACTGGCGATATCCCCCGCACCGCGAATCACCACCAGCTGGTGTCCGGAAGGATGAGAAGGCTTCATCATCAACCCACCCGGCGCGTTATTTTTCAACGGTAATAATTATTCCac > 8:839040/1‑139 (MQ=255)
gCATGATACAGACGTAGCGCTACACCACTGGCGATATCCCCCGCACCGCGAATCACCACCAGCTGGTGTCCGGAAGGATGAGAAGGCTTCATCATCAACCCACCCGGCGCGTTATTTTTAACCTGTAATATTTCTTcccg > 6:594262/1‑138 (MQ=255)
gCATGATACAGACGTAGCGCTACACCACTGGCGATATCCCCCGCACCGCGAATCACCACCAGCTGGTGTCCGGAAGGATGAGAAGGCTTCATCATCAACCCACCCGGCGCGTGTTTTTTAGCCGGTAATtttttgagcag > 1:694692/1‑133 (MQ=255)
gCATGATACAGACGTAGCGCTACACCACTGGCGATATCCCCCGCACCGCGAATCACCACCAGCTGGTGTCCGGAAGGATGAGAAGGCTTCATCATCAACCCACCCGGCGCGGTTTTTTTGACCTGTAATATTTATTCCac > 3:764534/1‑139 (MQ=255)
tGATACAGACGTAGCGCTACACCACTGGCGATATCCCCCGCACCGCGAATCACCACCAGCTGGTGTCCGGAAGGATGAGAAGGCTTCATCATCAACCCACCCGGCGCGTTATTTTTCACCTGTAATATTTCTGCCAGCAc < 4:344993/140‑1 (MQ=255)
cAGACCTAGAGCTACACCACTGGCGATATCCCCCGCACCGCTAATCACCACCAGCTGGTTTCAGGAAGGATGAGAATTATTAATCATCAACCCAAAAGGAGCGTTATTTTTCACATGTAATATTTCTGCCAGCACGCTaa < 5:716202/140‑1 (MQ=255)
aCGTAGCGCTACACCACTGGCGATATCCCCCGCACCGCGAATCACCACCAGCTGGTGTCCGGAAGGATGAGAAGGCTTCATCATCAACCCACCCGGCGCGGTATTTTTACACAGTTATATTTATGCCAGCACGCTAATgg > 5:347907/1‑140 (MQ=255)
gTAGCGCTACACCACTGGAGATATCCCACGCACCGAGAATCTCCACCAGCTGGTGTCCGGAAGGATGAGAAGGCTTCATCATCAACCCACCCGGCGCGTTATTTTTCACCTGTAATATTTCTGACAGCACGCTAATGGCg < 3:568573/140‑1 (MQ=255)
tAGCGCTACACCACTGGCGATATCCCCCGCACCGCGAATCACCACCAGCTGGTGTCCGGAAGGATGAGAAGGCTTCATCATCAACCCACCCGGCGCGTTTTTTTTCACCTGTAATATTTCTGCCCGCACGCTAATGGCgc > 8:358744/1‑139 (MQ=255)
aGCGCTTCACCACTGGCGATATCCCCCGCACCGCGAATCACCTCCAGCTGGTGTCCGGAAGGATGAGAAGGCTTCATCATCAACCCAACCGGCGCGTTATTTTTCACCTGTAATATTTCTGCCAGCACGCTAATGGCGAt < 3:829330/140‑1 (MQ=255)
aGCGCTACACCACTGGCGATATCCCCCGCACCGCGAATCACCCCCAGCTGGTGTCCGGAAGGATGAGAAGGCTTCATCATCAACCCACCCGGCGCGGTTTTTTTAACCTGGAATTTTTATGCCAGCACGCATATGGCGag > 5:662781/1‑139 (MQ=255)
gcgcTACACCACTGGCGATATCCCCCGCACCGCTAATCACCACCAGCTGGTGTCCGGAAGCATGAGAAGGCTTCATCATCAACCCACCCGGCGCGTAATTTTTCACCACTAAAATTTCTCCCAGCACGCAAATAGCGAtc > 4:428181/1‑140 (MQ=255)
gcgcTACACCACTGGCGATATCCCCCGCACCGCGAATCACCACCAGCTGGTGTCCGGAAGGATGAGCAGGCTTCATCATCAACCCACCCGGCGCGGTATATTTAACCTGTTAAATTTAAGCCAGCACACAAAAGGCggaa > 2:458900/1‑137 (MQ=255)
gcgcTACACCACTGGCGATATCCCCCGCACCGCGAATCACCACCAGCTGGTGTCCGGAAGGATGAGAAGGCTTCATCATCAACCCACCCGGCGCGTTGATTTTGACCTGTTAAATTTATGACAGCACCCTAATgtggata > 3:693872/1‑134 (MQ=255)
gcgcTACACCACTGGCGATATCCCCCGCACCGCGAATCACCACCAGCTGGTGTCCGGAAGGATGAGAAGGCTTCATCATCAACCCACCCGGCGCGTTATTTTTCACCTGTAATATTTATGCCACCACGCAAATTGCgcaa > 1:781892/1‑137 (MQ=255)
gcgcTACACCACTGGCGATATCCCCCGCACCGCGAATCACCACCAGCTGGTGTCCGGAAGGATGAGAAGGCTTCATCATCAACCCACCCGGCGCGGTTTTTTTGACCGGTAATATTTATTCCACCCCGCGAAttggggtc > 6:648272/1‑133 (MQ=255)
gcgcTACACCACTGGCGATATCCCCCGCACCGCGAATCACCACCAGCTGGTGTCCGGAAGGATGAGAAGGCTTCATCATCAACCCACCCGGCGCGGTATTTTTTACCTGTTATATTTATTCCCGCCCGCGAATGGCGGtc > 2:7632/1‑140 (MQ=255)
gcgcTACACCACTGGCGATATCCCCCGCACCGCGAATCACCACCAGCTGGTGTCCGGAAGGATGAGAAGGCTTCATCATCAACCCACCCGGCGCGGTATTTTTGACCAGTAATATTTAATGCAGCAAGCAAATGGCggta > 3:138337/1‑137 (MQ=255)
gcgcTACACCACTGGCGATATCCCCCGCACCGCGAATCACCACCAGCTGGTGTCCGGAAGGATGAGAAGGCTTCATCATCAACCCACCCGGCGCGGTATTTTTGAACTGTTATATTTCTGACAGCCCACGAATGGCgtgg > 3:320014/1‑137 (MQ=255)
gcgcTACACCACTGGCGATATCCCCCGCACCGCGAATCACCACCAGCTGGTGTCCGGAAGGATGAGAAGGCTTCATCATCAACCCACCCGGCGCGGTATTTTTAAACGGTAATATTTAAGCCAGCACGCAAATGGCGAta > 6:213197/1‑139 (MQ=255)
gcgcTACACCACTGGCGATATCCCCCGCACCGCGAATCACCACCAGCTGGTGTCCGGAAGGATGAGAAGGCTTCATCATCAACACACCCGGCGCGGTTTTTTTGACCGGGTATATTTTTGGCCGCCCCCGAATggagctg > 3:460177/1‑135 (MQ=255)
gcgcTACACCACTGGCGATATCCCCCGCACCGCGAATCACCACCAGCTGGTGTCCGGAACGATGAGAAGGCTTCATCATCAACCCACCAGGCGCGGGATTTTTAAACAGTAATATTTATTGCGGAACGCTAAAGGCGCtc > 1:272893/1‑140 (MQ=255)
gcccTACACCACTGGCGATATCCCCCGCACCGCGAATCACCACCAGCTGGTGTCCGGATGGATGAGAAGGCTTCATCATCAACCCACCCGGCGCGGGTTTTTTAACACGTAAATATTATGACAACACCCTAATGGGGAta > 7:313493/4‑139 (MQ=255)
gcTACACCACTGGCGATATCCCCCGCACCGCGAATCACCACCAGCTGGTGTCCGGAAGGATGAGAAGGCTTCATCATCAACCCACCCGGCGCGGTATTTTTCCCCTGTAATATTTATGCCCGCACGCAAATGGCGAtctc > 4:114908/1‑140 (MQ=255)
cTACACCACTGGCGATATCCCCCGCACCTCGAATCCCCACCAGCTGGTGTGCGGAAGGATGAGAAGGCGTCATCATCAACCCACCCGGCGCGTTATTTTTCACCTGTTATATTTATGGCCGCAACATAATTGCGATCTcc > 4:793559/1‑140 (MQ=255)
cTACACCACTGGCGATATCCCCCGCACCGCGAATCACCACCAGCTGGTGTCCGGAAGGATGAGAAGGCTTCATCATCAACCCACCCGGCGCGGTATTTTTAACCTGTAATTATTATGCCAGCACGCTAATTGCGTTGTcc > 2:202821/1‑140 (MQ=255)
ccacTGGCGATATCCCCCGCACCGCGAATCACCACCAGCTGGGGTCCGGAAGGATGAGAAGGCTTCATCATCAACCCACCCCGCGCGGTATTTTTCACCTGTAATATTTCTGCCAGCACGCTAATGGCGATCTCCTgcgg < 2:323127/140‑1 (MQ=255)
cTGGCGATATCCCCCGCACCGCGAATCACCACCAGCTGGTGTCCGGAAGGATGAGCAGGCTTCATCATCCACCCCCCCGGCGCGGTTATTTTCTCCAGTTAATTTTGTGCCAGCACGCGAATGGCGCTCTCCAgcggcgg > 5:362008/1‑139 (MQ=255)
cTGGCGATATCCCCCGCACCGCGAATCACCACCAGCTGGTGTCCGGAAGGATGAGAAGGCTTCTTCATCAACCCACCCGGCGCGGTTTTTTTTACCAGTTAAAATTAATACATCACGCGAAATGCGATCTCCAgcggcgg > 7:292013/1‑139 (MQ=255)
cTGGCGATATCCCCCGCACCGCGAATCACCACCAGCTGGTGTCCGGAAGGATGAGAAGGCTTCATCATCAACCCACCCGGCGCGTTTTTTTTTACCGGTTATATTTATGCCAGCACCCAAATGGCGAACTCCAgcggcgg > 5:678399/1‑139 (MQ=255)
cTGGCGATATCCCCCGCACCGCGAATCACCACCAGCTGGTGTCCGGAAGGATGAGAAGGCTTCATCATCAACCCACCCGGCGCGTTATTTTTGACCGGTAATATTTCTGCCAGCACGCGAATGGCGCTCTCCTgcggcgg > 4:95980/1‑139 (MQ=255)
cTGGCGATATCCCCCGCACCGCGAATCACCACCAGCTGGTGTCCGGAAGGATGAGAAGGCTTCATCATCAACCCACCCGGCGCGTTATTTTTCACCTGTAATATTTCTGCCAGCACGCGAATGGCGCTCTCCTgcggcgg > 2:499278/1‑139 (MQ=255)
cTGGCGATATCCCCCGCACCGCGAATCACCACCAGCTGGTGTCCGGAAGGATGAGAAGGCTTCATCATCAACCCACCCGGCGCGGTTTTTTTGACCGGTAATTTTTATGCCAGCACGCTAAAGGGGCTCTCCTgcggcgg > 2:550535/1‑139 (MQ=255)
cTGGCGATATCCCCCGCACCGCGAATCACCACCAGCTGGTGTCCGGAAGGATGAGAAGGCTTCATCATCAACCCACCCGGCGCGGTTTTTTTCACCGGTAATATTTATTGCCCCACGCGAAAGGCGAGGGCCAgcggcgg > 8:124078/1‑139 (MQ=255)
cTGGCGATATCCCCCGCACCGCGAATCACCACCAGCTGGGGTCCGGAAGGATGAGAAGGCTTCATCATCAACCCCCCCGGCGCGGTATTTTTGAGCTGTAATATTTCTGCCGGCACGCGAAATGCGCTCTCCTgcggcgg > 8:662475/1‑139 (MQ=255)
cTGGCGATATCCCCCGCACCGAGAATCACCACCAGCTGGTGTCCGGAAGGATGAGAAGGCTTCATCATCAACCCACCCGGCGCGGTTTTTTTAACCTGTAATATTTATGGCAGCACGCGAATGGCGATGACCTgcggcgg > 1:609669/1‑139 (MQ=255)
atcgCGATATCCCCCGCACCTCGAATAACAACCAGCTGGTGTCCGGAAGGCTGAGAAGGCTTCATCATCAACCCACCCGGCGCGGGTTGTTTGCCCGGGTATCTTTCTGGCCGCCCGCGAATGGCGATCACCAgcggcgg > 6:729844/4‑139 (MQ=255)
gCGATATCCCCCGCACCGCGAATCACCACCAGCTGGTGTCCGGAAGGATGAGCAGGCTTCATCATCAACCCACCCGGCGCGTTATTTTTCACCTGTAATATTTCTGCCAGCACGCTAATGGCGATCTCCTGCGGCGTTTc < 4:290099/140‑1 (MQ=255)
gCGATATCCCCCGCACCGCGAATCACCACCAGCTGGTGTCCGGAAGGATGAGAAGGCTTCCTCATCAACCCACCCGGCGCGTTTTTTTTAACCGGTAATATTTATTCCAGCACCCTAATGGGGCTCTCATTCGGCGttta > 4:669276/1‑139 (MQ=255)
gCGATATCCCCCGCACCGCGAATCACCACCAGCTGGTGTCCGGAAGGATGAGAAGGCTTCATCATCAACCCACCCTGCGCGTTATTTTTCACCTGTAATATTTCTGCCAGCACGCTAATGGCGATCTCCTGCGGCGTTTc < 4:667217/140‑1 (MQ=255)
gCGATATCCCCCGCACCGCGAATCACCACCAGCTGGTGTCCGGAAGGATGAGAAGGCTTCATCATCAACCCACCCGGCGCGTTAttttc > 7:555998/1‑88 (MQ=255)
gCGATATCCCCCGCACCGCGAATCACCACCAGCTGGTGTCCGGAAGGATGAGAAGGCTTCATCATCAACCCACCCGGCGCGTTAttttc < 8:555998/89‑2 (MQ=255)
gCGATATCCCCCGCACCGCGAATCACCACCAGCTGGTGTCCGGAAGGATGAGAAGGCTTCATCATCAACCCACCCGGCGCGTTATTTTTAACCAGTAAAATTTATGCCAGCACGCTAAAGGCGAACTACTgcggccgtta > 8:941344/1‑135 (MQ=255)
gCGATATCCCCCGCACCGCGAATCACCACCAGCTGGTGTCCGGAAGGATGAGAAGGCTTCATCATCAACCCACCCGGCGCGGTATTTTTAACCTGTGATTTTTATGGCAGCCCGCCAAAGGCGGGATCCCGCGGCGgttg > 5:647770/1‑139 (MQ=255)
gCGATATCCCCCGCACCGCGAATCACCACCAGCTGGTGTCCGGAAGGATGAGAAGGCTTCATCATCAACACACCCGGCGGGTTATTTTTCAACTGTAATATTTCTGACAGCACGCTAATGGCGATCTCCTGCGGCGTTTc < 6:378726/140‑1 (MQ=255)
tatatCCCCCGCACCGCGAATCACCACCAGCTGGTGTCCGGAAGGATGAGAAGGCTTCATCATCAACCCACCCGGCGCGTTATTTTTCACCTGTAATATTTCTGCCAGCACGCTAATGGCGATCTCCTGCGGCGTTTCCg < 4:1024931/139‑1 (MQ=255)
gATATCCCCCGCACCGCGAATCACCACCAGCTGGTGTCCGGAAGGATGAGAAGGCTTCATCATCAACCCACCCGGCGCGTTATTTTTCACCTGTAATATTTCTGCCAGCACGCTAATGGCGATCTCCTGCGGCGTTTCCg < 7:699953/140‑1 (MQ=255)
gATATCCCCCGCACCGCGAATCACCACCAGCTGGTGTCCGGAAGGAGGAGAAGGCTTCCTCATCAACCCACCCGGCGCGTTATTTTTCACCTGTAATATTTCTGCCAGCACGCTAATGGCGATCTCCTGCGGCGTTTCCg < 8:401173/140‑1 (MQ=255)
atCCCCCGCACCGCGAATCACCACCAGCTGGTGTCCGGAAGGATGAGAAGGCTTCATCATCAACCCACCCGGCGCGTTATTTTTCACCTGTAATATTTCTGCCAGCACGCTAATGGCGATCTCCTGCGGCGTTTCCGCAc < 8:309166/140‑1 (MQ=255)
atCCCCCGCACCGCGAATCACCACCAGCTGGTGTCCGGAAGGATGAGAAGGCTTCATCATCAACCCACCCGGCGCGGTATTTTTAAACTGTAATATTTCTGACAGCCCGCTAATGGCGATCTCCAGCGGCGTTTCCGGAc > 8:892/1‑140 (MQ=255)
cccccGCACCGCGAATCACCACCAGCTGGTGTCCGGAAGGATGAGAAGGCTTCATCATCAACCCACCCGGCGCGTTATTTTTCACCTGTAATATTTCTGCCAGCACGCTAATGGCGATCTCCTGCGGCGTTTCCGCACCt < 3:953015/140‑1 (MQ=255)
cccccGCACAGCGAATCACCACCAGCTGGTGTCCGGAAGGATGAGAAGGCTTCATCATCAACCCACCCGGCGCGTTATTTTTCACCTGTAATATTTCTGCCAGCACGCTAATGGCGATCTCCTGCGGCGTTTCCGCACCt < 7:975434/140‑1 (MQ=255)
ccGCACCGTGAATCACCACCAGCTGGTGTCCGGAAGGATGAGAAGGCTTCATCATCAACCCACCCGGCGCGGTATTTTTGACCGGTAATATTTCTGCCAGCCCGCTAAAGGCGATCTCCAGCGGCGGTTCCGGACCTaag > 6:696643/1‑138 (MQ=255)
ccGCACCGCGAATCACCACCAGCTGGTGTCCGGAAGGATGAGAAGGCTTCATCATCAACCCACCCGGCGCGGTATTTTTGACCAGAAAAAATTAAGGCAGCCAGCTAATGGGGATCTACAGCGCCGATTCCGCACCTAtt > 8:27196/1‑139 (MQ=255)
ccGCACCGCGAATCACCACCAGCTGGTGTCCGGAAGGATGAGAAGGCTTCATCATCAACCCACCCGGCGCGGTATTTTTAACCAGTAATAATTAAGGCAGCACGCAAAAGGCGATCTACAGCCGCCGTTCCCCACCAAtt > 6:339876/1‑139 (MQ=255)
aCCGCGAATCACCACCAGCTGGTGTCCGGAAGGATGAGAAGGCTTCATCATCAACCCACCCGGCGCGTTATTTTTAACCAGTAATATTTAAGACAGCACGCTAATTGCGATCTCCTGCGGCGTTTACGCCCCTAtgtttt > 4:56442/1‑138 (MQ=255)
ccGCGAATCACCACCAGCTGGTGTCCGGAAGGATGAGAAGGCTTCATCATCAACCCACCCGGCGCGTTATTTTTCACCTGTAATATTTCTGCCAGCACGCTAATGGCGATCTCCTGCGGCGTTTCCGCACCTATGTTGTa < 4:218054/140‑1 (MQ=255)
ccGCGAATCACCACCAGCTGGTGTCCGGAAGGATGAGAAGGCTTCATCATCAACCCACCCGGCGCGTTATTTTTCACCTGTAATATTTCTGCCAGCACGCTAATGGCGATCTCCTGCGGCGTTTCCGCACCTATGTTGTa < 4:106649/140‑1 (MQ=255)
cgcgAATCACCACCAGCTGGTGTCCGGAAGGATAAGAAGGCTACATAATCCCCCCACCCGGCGCGTTTTTTTTGAACTGTAAAATTTTTGGCAGCCCCCGAAAGGTGCTAACCTGCCGCGTTTACGCCCCAATCTTTTaa > 6:504965/1‑140 (MQ=255)
cgAATCACCACCAGCTGGTGTCCGGAAGGATGAGAAGGCTTCATCATCAACCCACCCGGCGCGTGTTTTTTCACCAGGAATATTTGTGCCAGCACGCGTATGGGGAGATACTGCGGGGTTTGCGCAGCTATTTTGTTAcc > 1:656722/1‑140 (MQ=255)
cgAATCACCACCAGCTGGTGTCCGGAAGGATGAGAAGGCTTCATCATCAACCCACCCGGCGCGGTTTTTTTTACCGGGTATATTTGTGGCAGCCCGCTGATTGCGATCTCCTTCGGCGGTTGCGCCCCAGtgttttgaac > 8:52960/1‑134 (MQ=255)
gAATCACCACCAGCTGGTGTCCGGAAGGATGAGAAGGCTTCATCATCAACCCACCCGGCGCGGTTTTTTTGACCAGTTATATTTCTGGCAGCACCCGTATGGCGCTCTACTGGGGCGGTTACGGCCCTATTTTGTTAccc > 2:28218/1‑139 (MQ=255)
accaccAGCTGGTGTCCGGAAGGATGAGAAGGCTTCATCATCAACCCCCCCGGCGCGTTATTTTTCACCAGTAATATTTATGGCAGACCGCTAATGGCGCACTCCTGCGGCGTTTCCGCACCGTTGGTGGTCCCAACggg > 2:671413/1‑140 (MQ=255)
accaccAGCTGGTGTCCGGAAGGATGAGAAGGCTTCATCATCAACCCACCCGGCGCGTTATTTTTCACCTGTAATATTTCTGCCAGCACGCTAATGGCGATCTCCTGCGGCGTTTCCGCACCTATGTTGTAACCAACggg < 4:980165/140‑1 (MQ=255)
accaccAGCTGGTGTCCGGAAGGATGAGAAGGCTTCATCATCAACCCACCCGGCGCGTTATTTTTCACCTGTAATATTTCTGCCAGCACGCTAATGGCGATCTCCTGCGGCGTTTCCGCACCTATGTTGTAACCAACggg < 1:873130/140‑1 (MQ=255)
accacaAGCGGGTGTCCGGAATGATGAGAAGGCTTCAGCATCAACCCCCCCGGCGCGTTATTTTTCACCTGTAATATTTCTGCCAGCACGCTAATGGCGATCTCCTGCGGCGTTTCCGCACCTATGTTGTAACCAACggg < 5:603437/140‑1 (MQ=255)
tgtCCGGAAGGATGAGAAGGCTTCATCATCAACCCACCCGGCGCGTGTTTTTTAACATGTAAAATTTATTGCACCACGCTAATGGCGATAAACTGAGGCGTTTCCGGCCCAAAGTTGTTACCAACGGGGGCATGTacaag > 5:266053/1‑136 (MQ=255)
gtCCGGAAGGATGAGAAGGCTTCATCATCAACCCACCCGGCGCGTTATTTTTCACCTGTAATATTTCTGCCAGCACGCTAATGGCGATCTCCTGCGGCGTTTCCGCACCTATGTTGTAACCAACGGGCGCATGTAAACgg < 1:375204/140‑1 (MQ=255)
gccGGAAGGATGAGAAGGCTTCATCATCAACCCACCCGGCGCGTTATTTTTCACCTGTAATATTTCTGCCAGCACGCTAATGGCGATCTCCTGCGGCGTTTCCGCACCTATGTTGTAACCAACGGGCGCATGTAAACggg < 6:359125/139‑1 (MQ=255)
ccGGAAGGATGAGAAGGCTTCATCATCAACCCACACGGCGCGTTATTTTTAACAAGTTATATTTATGCCAGCACCCAATTGGCGATCTCCATCGGCGGTTCCGCACCTATGTTGTAAACAACGGGCGGATGTGAACgggg > 3:72752/1‑139 (MQ=255)
cGGAAGGATGAGAAGGCTTCATCATCAACCCACCCGGCGCGTTATTTTTCACCTGTAATATTTCTGCCAGCACGCTAATGGCGATCTCCTGCGGCGTTTCCGCACCTATGTTGTAACCAACGGGCGCATGTAAACGGGCa < 5:691943/140‑1 (MQ=255)
aaGGATGAGCAGGCTTCATCATCAACCCACCCGTCGCGTTATTTTTCTCCTGTAATATTTCTGCCAGCACGCTAATGGCGATCTCCTGCGGCGTTTCCGCACCTATGTTGTAACCAACGGGCGCATGTAAACGGGCAata < 5:555008/140‑1 (MQ=255)
cTTCATCATGAACCCACCAGGCGCGTTATTTTTCACCTGTAATATTTCTGCCATCACGCTAATTGCGATCTCCTGAGGCGTTTCCGCAACTATGTTGTAACCAACGGGCGCATGTAAACGGGCAATATGTTCTTCAGCCa < 4:748390/140‑1 (MQ=255)
cTTCATCATCAACCCACCCGGCGCGTTATTTTTCACCTGTAATATTTCTGCCAGCACGCTAATGGCGATCTCCTGCGGCGTTTCCGCACCTATGTTGTAACCAACGGGCGCATGTAAACGGGCAATATGTTCTTCAGCCa < 7:790840/140‑1 (MQ=255)
cTTCATCATCAACCCACCCGGCGCGTTATTTTTCACCTGTAATATTTCTGCCAGCACGCTAATGGCGATCTCCTGCGGCGTTTCCGCACCTATGTTGTAACCAACGGGCGCATGTAAACGGGCAATATGTTCTTCAGCCa < 4:197850/140‑1 (MQ=255)
cTTCATCATCAACCCACCCGGCGCGGTATTTTTGACCTGTAATATTTATGCCAGCACGCTAATGGCGCTCTCCTGCGGCGTTTCCGCCCCAATGTTTTTACCAACGGGCGCATTTAAACGGGCAAAATGttattacgccc > 3:630739/1‑134 (MQ=255)
atcatcaACCCACCCGGCGCGTTATTTTTCACCTGTAATATTTCTGCCAGCACGCTAATGGCGATCTCCTGCGGCGTTTCCGCACCTATGTTGTAACCAACGGGCGCATGTAAACGGGCAATATGTTCTTCAGCCACGcc < 3:1068901/140‑1 (MQ=255)
tcatcaACCCACCCGGCGCGTTATTTTTCACCTGTAATATTTCTGCCAGCACGCTAATGGCGATCTCCTGCGGCGTTTCCGCACCTATGTTGTAACCAACGGGCGCATGTAAACGGGCAATATGTTCTTCAGCCACGCCt < 6:1025012/140‑1 (MQ=255)
acccacccGGCGCGTTATTTTTCACCTGTAATATTTCTGCCAGCACGCTAATGGCGATCTCCTGCGGCGTTTCCGCACCTATGTTGTAACCAACGGTCGCATGTAAACGGGCAATTTGTTCTTCAGCCACGCCTTTCTCa < 3:803485/140‑1 (MQ=255)
acacacccGGCGCGTTATTTTTCTCCTGTAATTTTTCTGCCAGCACGCTAATGGCGATCTCCTGCGGCGTTTCCGCACCTATGTTGTAACCAACGGGCGCATGTAATCGGGCAATATGTTCTTCAGCCACGCCTTTCTCa < 6:871081/137‑1 (MQ=255)
cgcgTTATTTTTCACCTGTAATATTTCTGCCAGCACGCTAATGGCGATCTCCTGCGGCGTTTCCGCACCTATGTTGTAACCAACGGGCGCATGTAAACGGGCAATATGTTCTTCAGCCACGCCTTTCTCACGCAATTGgc < 1:1075859/140‑1 (MQ=255)
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CACTTCCAACATGATCACTTTAAAACCCGCATGATACAGACGTAGCGCTACACCACTGGCGATATCCCCCGCACCGCGAATCACCACCAGCTGGTGTCCGGAAGGATGAGAAGGCTTCATCATCAACCCACCCGGCGCGTTATTTTTCACCTGTAATATTTCTGCCAGCACGCTAATGGCGATCTCCTGCGGCGTTTCCGCACCTATGTTGTAACCAACGGGCGCATGTAAACGGGCAATATGTTCTTCAGCCACGCCTTTCTCACGCAATTGGC > NZ_CP022686/1633707‑1633981
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| Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
N/A
