Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A9 F13 I0 R1
|
203 |
11425.2 |
8793538 |
98.4% |
8652841 |
135.9 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
freq |
annotation |
gene |
description |
| RA |
NZ_CP022686 |
1,633,846 |
T→G |
30.0% |
N253T (AAC→ACC) |
yqeB ← |
selenium‑dependent molybdenum cofactor biosynthesis protein YqeB |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NZ_CP022686 | 1,633,846 | 0 | T | G | 30.0%
| 192.4
/ 61.0
| 182 | N253T (AAC→ACC) | yqeB | selenium‑dependent molybdenum cofactor biosynthesis protein YqeB |
| Reads supporting (aligned to +/- strand): ref base T (42/83); new base G (54/3); total (96/86) |
| Fisher's exact test for biased strand distribution p-value = 4.45e-16 |
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 |
Only 100 of 184 total aligned reads displayed.
CACTTCCAACATGATCACTTTAAAACCCGCATGATACAGACGTAGCGCTACACCACTGGCGATATCCCCCGCACCGCGAATCACCACCAGCTGGTGTCCGGAAGGATGAGAAGGCTTCATCATCAACCCACCCGGCGC‑GTTATTTTTCACCTGTAATATTTCTGCCAGCACGCTAATGGCGATCTCCTGCGGCGTTTCCGCACCTATGTTGTAACCAACGGGCGCATGTAAACGGGCAATATGTTCTTCAGCCACGCCTTTCTCACGCAATTGGCGC > NZ_CP022686/1633707‑1633983
|
cAACATGATCACTTTAAAACCCGCATGATACAGACGTAGCGCTACACCACTGGCGATATCCCCCGCACCGCGAATCACCACCAGCTGGTGTCCGGAAGGATGAGAAGGCTTCATCATCAACCCACCCGGCGC‑GTTAtttt < 6:629852/140‑1 (MQ=255)
aaCATGATCACTTTAAAACCCGCATGATACCGACGTAGCGCTACACCACTGTCGATATCCCCCGCACCGCGCATCACCACCAGCTGGTGTCCGGAAGGATGAGAAGGCTTCATCATCAACCCCCCCGGCTC‑GTTAttttt < 5:318021/140‑1 (MQ=255)
aaCATGATCACTTTAAAACCCGCATGATACAGACGTAGCGCTACACCACTGGCGATATCCCCCGCACCGCGAATCACCACCAGCTGGTGTCCGGAAGGATGAGAAGGCTTCATCATCAACCCACCCGGCGC‑GTTAttttt < 5:317984/140‑1 (MQ=255)
aTGATCACTTTAAAACCCGCATGATACAGACGTAGCGCTACACCACTGGCGATATCCCCCGCACCGCGAATCACCACCAGCTGGTGTCCGGAAGGATGAGAAGGCTTCATCATCAACCCACCCGGCGC‑GTTATTTTTCAc < 6:766467/140‑1 (MQ=255)
cACTTTAAAACCCGCATGATACAGACGTAGCGCTACACCACTGGCGATATCCCCCGCACCGCGAATCACCACCAGCTGGTGTCCGGAAGGATGAGAAGGCTTCATCATCAACCCACCCGGCGA‑GGTAGTTTTCAACTg > 4:665257/1‑138 (MQ=255)
tAAAACCCGCATGATACAGACGTAGCGCTACACCACTGGCGATATCCCACGCACCGCGAATCACCACAAGCTGGTGACCGGAAGGATGAGAAGGCTTCATCATCAACCCACCCGGCGC‑CTTATTTTTCACCTGGAATAtt > 7:865596/1‑140 (MQ=255)
aaaCCCGCATGATACAGACGTAGCGCTACACCACTGGCGATATCCCCCGCACCGCGAATCACCACCAGCTGGTGTCCGGAAGGATGAGAAGGCTTCATCATCAACCCACCCGGCGC‑GGGATTTTTTACCTGTTATAtt > 3:315790/1‑138 (MQ=255)
gCATGATACAGACGTAGCGCTACACCACTGGCGATATCCCCCGCACCGCGAATCACCACCATCTGGTGTCCGGAAGGATGAGAAGGCTTAATCATCAACCCACCCGGCGC‑GTTATTTTTCACCTGTAATATTTCTGCAAg < 6:1057598/140‑1 (MQ=255)
gCATGATACAGACGTAGCGCTACACCACTGGCGATATCCCCCGCACCGCGAATCACCACCAGCTTGTGTCCGGAAGGATGAGAAGGCTTCATCATCAACCCACCCGGCGC‑GTTATTTTTCACCTGTAATATTTCTGCCAg < 5:885541/140‑1 (MQ=255)
gCATGATACAGACGTAGCGCTACACCACTGGCGATATCCCCCGCACCGCGAATCACCACCAGCTGGTGTCCGGAAGGATGAGAAGGCTTCATCATCAACCCACCCGGCGC‑GTTATTTTTCACCTGTAATATTTCTGcc < 4:280381/138‑1 (MQ=255)
gCATGATACAGACGTAGCGCTACACCACTGGCGATATCCCCCGCACCGCGAATCACCACCAGCTGGTGTCCGGAAGGATGAGAAGGCTTCATCATCAACCCACCCGGCGC‑GTTATTTTTCACCTGTAATATTTCTGCCAg < 1:785993/140‑1 (MQ=255)
gCATGATACAGACGTAGCGCTACACCACTGGCGATATCCCCCGCACCGCGAATCACCACCAGCTGGTGTCCGGAAGGATGAGAAGGCTTCATCATCAACCCACCCGGCGC‑GTTATTTTTCACCTGTAATATTTATGCCAg > 5:941298/1‑140 (MQ=255)
gCATGATACAGACGTAGCGCTACACCACTGGCGATATCCCCCGCACCGCGAATCACCACCAGCTGGTGTCCGGAAGGATGAGAAGGCTTCATCATCAACCCACCCGGCGC‑GTTATTTTTCACCTGTAAATTTTATGACAg > 8:275243/1‑140 (MQ=255)
gCATGATACAGACGTAGCGCTACACCACTGGCGATATCACCCTAACCGCGAATCACCACAAGCTGTTGTCCGGACGGATGAGAAGGCTTCATCATCAACCCACCCTGCGC‑GGTATTTTTCAACTGGAATATTTAAGCCaa > 7:162301/1‑139 (MQ=255)
ccATGATACAGAAGTAGAGCTACACCACTGGCGATATCCCCCGCACCGCGAATCACCACAAGCTGGTGTCCGGAAGGATGAGAAGGCTTCATCATCAACCCACCCGGCGC‑GTTATTTTTCACCTGTAATATTTCTGCCAg < 7:964680/139‑1 (MQ=255)
aTGATACAGACGTAGCGCTACACCACTGGCGATATCCCCCGCACCGCGAATCACCACCAGCTGGTGTCCGGAAGGATGAGAAGGCTTCATCATCAACCCACCCGGCGC‑GTTATTTTTCACCTGTAATATTTCTGCCAGCa < 6:245224/140‑1 (MQ=255)
aTGATACAGACGTAGCGCTACACCACTGGCGATATCCCCCGCACCGCGAATCACCACCAGCTGGTGTCCGGAAGGATGAGAAGGCTTCATCATCAACCCACCCGGCGC‑GTTATTTTTCACCTGTAATATTTCTGCCAGCa < 2:413286/140‑1 (MQ=255)
aTGATACAGACGTAGCGCTACACCACTGGCGATATCCCCCGCACCGCGAATCACCACCAGCTGGTGTCCGGAAGGATGAGAAGGCTTCATCATCAACCCACCCGGCGC‑GTTATTTTTAACCAGTTATATTTATTCCac > 3:544270/1‑137 (MQ=255)
aTGATACAGACGTAGCGCTACACCACTGGCGATATCCCCCGCACCGCGAATCACCACCAGCTGGTGTCCGGAAGGAAGAGAAGGCTTCATCATCAACCCACCCGGCGC‑GTTATTTTTCACCTGTAATATTTCTGCCac > 4:838943/1‑137 (MQ=255)
aCGTAGCGCTACACCACTGGCGATATCCCCCGCACCGCGAATCACCACCAGCTGGTGTCCGGAAGGATGAGAAGGCTTCATCATCAACCCACCCGGCGC‑GTTATTTTTCACCTGTAATATTTCTGCCAGCACGCTAATgg < 2:48171/140‑1 (MQ=255)
gTAGCGCTACACCACTGGCGATATCCCCCGCACCGCGAATCACCACCAGCTGGTGTCCGGAAGGATGAGAAGGCTTCATCATCAACCCACCCGGCGC‑GTTATTTTTCACCTGTAATATTTCTGCCAGCACGCTAATgg < 3:890961/138‑1 (MQ=255)
gTAGCGCTACACCACTGGCGATATCCCCCGCACCGCGAATCACCACCAGCTGGTGTCCGGAAGGATGAGAAGGCTTCATCATCAACCCACCCGGCGC‑GTTATTTTTCACCTGTAATATTTCTGCCAGCACGCTAATGGCg < 6:334442/140‑1 (MQ=255)
gTAGCGCTACACCACTGGCGATATCCCCCGCACCGCGAATCACCACCAGCTGGTGTCCGGAAGGATGAGAAGGCTTCATCATCAACCCACCCGGCGC‑GTTATTTTTCACCTGTAATATTTCTGCCAGCACGCTAATGGCg < 1:44776/140‑1 (MQ=255)
tAGCGCTACCCCACTGGCGATATCCCCCGCACCGCGAAACACCACAAGCTGGTGTCCGGAAGGATGAGAAGGCTTCATCATCAACCCACCCGGCGC‑GGTTATTTTAACCTTTAATATTTATGCCAGCACGAGAATGGGGa > 2:445572/1‑140 (MQ=255)
gcgcTACACCACTGGCGATATCCCCCGCACCGCGAATCACCACCAGCTGGTGTCCGGAAGGATGAGAAGGCTTCATCATCAACCCACCCGGCGC‑GGTGTTTTTGACCTGTAATATTTGTGCCAGCCCGCGAATGGCggtg > 6:800586/1‑137 (MQ=255)
gcgcTACACCACTGGCGATATCCCCCGCACCGCGAATCACCACCAGCTGGTGTCCGGAAGGATGAGAAGGCTTCATCATCAACCCACCCGGCGC‑GGTATTTTTCACCTGTTATATTTATGCCAGCCCGCGAATTGCGaac > 2:698883/1‑138 (MQ=255)
gcgcTACACCACTGGCGATATCCCCCGCACCGCGAATCACCACCAGCTGGTGTCCGGAAGGATGAGAAGGCTTCATCATCAACCCACCCGGCGC‑GGTATTTTTAACCTGTAATTTTTATGCCAGCCCGCTAATGGCGAtc > 2:103929/1‑140 (MQ=255)
gcgcTACACCACTGGAGATATCCCCCGCACCGCGAATCACCAACAGCTGGTGTCCGGAAGGATGAGAAGGCTTCATCATCAACCCACCCGGCGC‑GTTTTTTTTAACCTGTAATTTTTTAGCCAGCACCCTAATGGCGAta > 1:690613/1‑139 (MQ=255)
gcTACACCACTGGCGATATCCCCCGCACCGCGAATCACCACCAGCTGGTGTCCTGAAGGATGAGAAGGCTTCATCATCAACCCCCCCGGCGC‑GTGATTTTTCACCTGTTATATTTCTGGCAGCACGAGTATGGCGAta > 4:754155/1‑137 (MQ=255)
gcTACACCACTGGCGATATCCCCCGCACCGCGAATCACCACCAGCTGGTGTCCGGAAGGATGAGAAGGCTTCATCATCAACCCACCCGGCGC‑GTTATTTTTAACCTTGAATATTTATTCCAGCACGCGAATTGCGAta > 3:684248/1‑137 (MQ=255)
caccacTGGCGATATCCCCCGCACCGCGAATCACCACCAGCTGGTGTCCGGAAGGATGAGAAGGCTTCATCATCAACCCACCCGGCGC‑GGTATTTTTTAACGGTTATATTTTTGACACCACGCGAAATGCGCTCTCCAgc > 5:379392/1‑140 (MQ=255)
ccacTGGCGATATCCCCCGCACCGCGAATCACCACCAGCTGGTGTCCGGAAGGATGAGAAGGCTTCATCATCAACCCACCCGGCGC‑GTTATTTTTCACCTGTAATATTTCTGCCAGCACGCTAATGGCGATCTCCTgc < 4:93990/138‑1 (MQ=255)
ccacTGGCGATATCCCCCGCACCGCGAATCACCACCAGCTGGTGTCCGGAAGGATGAGAAGGCTTCATCATCAACCCACCCGGCGC‑GTTATTTTTCACCTGTAATATTTCTGCCAGCACGCTAATGGCGATCTCCTgc < 4:911785/138‑1 (MQ=255)
ccacTGGCGATATCCCCCGCACCGCGAATCACCACCAGCTGGTGTCCGGAAGGATGAGAAGGCTTCATCATCAACCCACCCGGCGC‑GTTATTTTTCACCTGTAATATTTCTGCCAGCACGCTAATGGCGATCTCCTgc < 4:217009/138‑1 (MQ=255)
cTGGCGATATCCCCCGCACCGCGAATCACCACCAGCTGGTGTCCGGAAGGATGAGAAGGCTTCATCATCAACCCCCCCGGCGC‑GTGTATTTTAACCAGTAAAATTTATTCACGACCCCAAAATGCGATCTCCTgcgcacg > 8:676910/1‑136 (MQ=255)
cTGGCGATATCCCCCGCACCGCGAATCACCACCAGCTGGTGTCCGGAAGGATGAGAAGGCTTCATCATCAACCCACCCGGCGC‑GTTATTTTTGACCTGTAATATTTATGCCAGCACGCTAATGGCGATATACAgcggcgg > 8:953726/1‑139 (MQ=255)
cTGGCGATATCCCCCGCACCGCGAATCACCACCAGCTGGTGTCCGGAAGGATGAGAAGGCTTCATCATCAACCCACCCGGCGC‑GGTTTTTTTACCCAGTAATATTTCTGCCAGCCCCCGAAAGGGGATCTCCTGCCGCGt > 8:573423/1‑140 (MQ=255)
cTGGCGATATCCCCCGCACCGCGAATCACCACCAGCTGGTGTCCGGAAGGATGAGAAGGCTTCATCATCAACCCACCCGGCGC‑GGTATTTTTTACCGGTTAAATTTATTCCAGCACGCGAATGGCGATCACCAgcggcgg > 2:885819/1‑139 (MQ=255)
cTGGCGATATCCCCCGCACCGCGAATCACCACCAGCTGGTGTCCGGAAGGATGAGAAGGCTTCATCATCAACCCACCCGGCGC‑GGTATTTTTGACCTGTAATATTTATGCCAGCCCGCGAAAGGCGGTCTCCGgcggcgg > 7:426906/1‑139 (MQ=255)
cTGGCGATATCCCCCGCACCGCGAATCACCACCAGCTGGTGTCCGGAAGGATGAGAAGGCTTCATCATCAACCCACCCGGCGC‑GGTATTTTTAACCAGGAATAATTGTTCCCGCACGCGAATGGCGATCTCCTGCGGCGt > 8:310779/1‑140 (MQ=255)
cTGGCGATATCCCCCGCACCGCGAATCACCACCAGCTGGTGTCCGGAAGGATGAGAAGGCTTCATCATCAACCCACCCGGCGC‑GGGTTTTTTGACCGGTAATATTTATGGCCGCACGCTAATGGCGGTCTCCAgcggcgg > 1:920836/1‑139 (MQ=255)
cTGGCGATATCCCCCGCACCGCGAATCACCACCAGATGGTGTCCGGAAGGATGAGAAGGCTTCATCATCAACCCACCCGGCGC‑GTGATTTTTGACCTGTATTATTTGTGCCCGCCCGCGAATGGCGATCACCTgcggcgg > 6:463971/1‑139 (MQ=255)
ggCGATATCCCCCGCACCGCGAATCACCACCAGCTGGTGTCCGGAAGGATGAGAAGGCTTCATCATCAACCCACCCGGCGCGGGTTTTTTTCA‑CGGTAATATTTATGGCAGCCCGCGAATGGGGCTCGCCAgcggggg > 4:1104845/1‑135 (MQ=255)
ggCGATATCCCCCGCACCGCGAATCACCACCAGCTGGTGTCCGGAAGGATGAGAAGGCTTCATCATCAACCCACCCGGCGC‑GTTATTTTTGACCTGTAATATTTCTTCCAGCACGCGAATGGCGATCTACTGCGGCGt > 4:214635/1‑138 (MQ=255)
ggCGATATCCCCCGCACCGCGAATCACCACCAGCTGGTGTCAGGAAGGATGAGAAGGCTTCATCATCAACCCACCCGGCGC‑GTTTTTTTTCACCTGGAATATTTATGCCAGCACGCTAATGGCGCTCTCATGCGGGGt > 4:477122/1‑138 (MQ=255)
gCGATATCCCCCGCACCGCGAATCACCCCCAGCTGGTGTCCGGAAGGATGAGAAGGCTTCATCATCAACCCACCCGGCGA‑GGTATTTTTGACCAGTTATATTTATGCCAGCACGCTAATTGCGATCTCCAGCGGCGgtta > 7:690169/1‑139 (MQ=255)
gCGATATCCCCCGCACCGCGAATCACCACCAGCTGGTGTCCGGAAGGATGAGAAGGCTTCATCATCAACCCACCCGGCGC‑GTTATTTTTCACCTGTAATATTTCTGCCAGCACGCTAATGGCGATCTCCTGCGGCGTTTc < 1:1010500/140‑1 (MQ=255)
gCGATATCCCCCGCACCGCGAATCACCACCAGCTGGTGTCCGGAAGGATGAGAAGGCTTCATCATCAACCCACCCGGCGC‑GTGTTTTTTATCCGTGAAAATTTGTGCCCGCCCGCCGAAGGGGCTCTCCAGCGGCGgtta > 7:536296/1‑139 (MQ=255)
gCGATATCCCCCGCACCGCGAATCACCACCAGCTGGTGTCCGGAAGGATGAGAAGGCTTCATCATCAACCAACCCGGCGC‑GTTATTTTTGACCTTTAATATTTATTCCAGCACGAGAAATGGGATATCAAGCGGCGttta > 2:347383/1‑139 (MQ=255)
gCGATATCCCCCGCACCGCGAATCACCACCAGCTGGTGTCAGGAAGGATGAGAAGGCTTCATCATCAACCCACCCGGCGC‑GTTATTTTTCACCTGTAATATTTCTGCCAGCACGCTAATGGCGATCTCCTGCGGCGTTTc < 2:88481/140‑1 (MQ=255)
gATATCCCCCGCACCGCGAATCACCACCAGCTGGTGTCCGGAAGGATGAGAAGGCTTCATCATCTACCCACCCGGCGC‑GTTATTTTTCACCTGTAATATTTCTGCCAGCACGCTAATGGCGATCTCCTGCGGCGTTTCCg < 2:640810/140‑1 (MQ=255)
gATATCCCCCGCACCGCGAATCACCACCAGCTGGTGTCCGGAAGGATGAGAAGGCTTCATCATCAACCCACCCGGCGC‑GTTATTTTTCACCTGTAATATTTCTGCCAGCACGCTAATGGCGATCTCCTGCGGCGTTTCCg < 2:2770/140‑1 (MQ=255)
gATATCCCCCGCACCGCGAATCACCACCAGCTGGTGTCCGGAAGGATGAGAAGGCTTCATCATCAACCCACCCGGCGC‑GTTATTTTTCACCTGTAATATTTCTGCCAGCACGCTAATGGCGATCTCCTGCGGCGTTTCCg < 2:187840/140‑1 (MQ=255)
gATATCCCCCGCACCGCGAATCACCACCAGCTGGTGTCCGGAAGGATGAGAAGGCTTCATCATCAACCCACCCGGCGC‑GTTATTTTTCACCTGTAATATTTCTGCCAGCACGCTAATGGCGATCTCCTGCGGCGTTTCCg < 6:941298/140‑1 (MQ=255)
gATATCCCCCGCACCGCGAATCACCACCAGCTGGTGTCCGGAAGGATGAGAAGGCTTCATCATCAACCCACCCGGCGC‑GTTATTTTTCACCTGTAATATTTCTGCCAGCACGCTAATGGCGATCTCCTGCGGCGTTTCCg < 6:165393/140‑1 (MQ=255)
gATATCCCCCGCACCGCGAATCACCACCAGCTGGTGTCCGGAAGGATGAGAAGGCTTCATCATCAACCCACCCGGCGC‑GTTATTTTTCACCTGTAATATTTCTGCCAGCACGCTAATGGCGATCTCCTGCGGCGTTTCCg < 7:432053/140‑1 (MQ=255)
atatCCCCCGCACCGCGAATCACCACCAGCTGGTGTCCGGAAGGATGAGAAGGCTTCATCATCAACCCACCCGGCGC‑GGTATTTTTTGACCGGAATAATTATTCGATCACCCGAATGGCGATCACCAgccgcgggtgcgc > 5:853947/1‑133 (MQ=255)
atCCCCCGCACCGCGAATCACCACCAGCTGGTGTCCGGAAGGATGAGAAGGCTTCATCATCAACCCACCCGGCGC‑GTTATTTTTGACCTGGTATATTTCTGACAGCCCCATAATGGGGATCTCCTACGGCGTTTACGCAc > 6:975412/1‑140 (MQ=255)
atCCCCCGCACCGCGAATCACCACCAGCTGGTGTCCGGAAGGATGAGAAGGCTTCATCATCAACCCACCCGGCGC‑GTGTTTTTTGACCGGGAATATTTCTGCCAGCACCCGAATGGCGATCGCCTGCGGCGGTTCCGcgc > 2:228411/1‑138 (MQ=255)
cccccGCACCGCGAATCACCACCAGCTGGTGTCCGGAAGGATGAGAAGGCTTCATCATCAACCCACCCGGCGC‑GTTATTTTTCACCTGTAATATTTCTGCCAGCACGCTAATGGCGATCTCCTGCGGCGTTTCCGCACCt < 5:1009730/140‑1 (MQ=255)
ccGCACCGCGAATCACCACCAGCTGGTGTCCGGAAGGATGAGAAGGCTTCATCATCACCCCCCCCGGCGC‑GGTATTTTTTACCTGGAATATTTATGGCCCCACGCAAATGGCGAGGTCCGGCGGCGGTTACGCCCCAAtg > 7:94128/1‑140 (MQ=255)
ccGCACCGCGAATCACCACCAGCTGGTGTCCGGAAGGATGAGAAGGCTTCATCATCAACCCACCCGGCGC‑GTTATTTTTCACCTGTAATATTTCTGCCAGCACGCTAATGGCGATCTCCTGCGGCGTTTCCGCACCTAtg > 6:559597/1‑140 (MQ=255)
ccGCACCGCGAATCACCACCAGCTGGTGTCCGGAAGGATGAGAAGGCTTCATCATCAACCCACCCGGCGC‑GTTATTTTTCACCTGTAATATTTCTGCCAGCACGCAAATGGCGTTCTCCAGCGGCGTTTACGCACCTAtt > 5:61844/1‑139 (MQ=255)
ccGCGAATCACCACCAGCTGGTGTCCGGAAGGATGAGAAGGCTTCATCATCAACCCACCCGGCGC‑GTTATTTTTCACCTGTAATATTTCTGCCAGCACGCTAATGGCGATCTCCTGCGGCGTTTCCGCACCTAtgttg < 3:1630/138‑1 (MQ=255)
cgAATCACCACCAGCTGGTGTCCGGAAGGATGAGAAGGCTTCATCATCAACCCACCCGGCGC‑GGTTTTTTTGACCAGTAATATTTATGCCCGCACGCTAATGGGGATCTCCTGAGGCGTTTACCCCCCATAGTTGTAAcc > 1:1113288/1‑140 (MQ=255)
cgAATCACCACCAGCTGGTGTCCGGAAGGATGAGAAGGCTTCATCATCAACCCACCCGGCGC‑GGTATTTTTAACCTGTAATATTTCTGCCAGCACGCTAATGGCGCTCTACTGCGGCGTTTACGCACCTATGTTGGAAcc > 2:617044/1‑140 (MQ=255)
cgAATCACCACCAGCTGGTGTCCGGAAGGATGAGAAGGCTTCATCATCAACCCACCCGGCGC‑GGTATTTTTAACCGGGAATATTTCTGCCAGCACGCATAGGGCGCTCGACTGCGGCGGTTACGCACCGATGTTGTAAcc > 8:214987/1‑140 (MQ=255)
cccaccaGCTGGGGTCCGGAAGGATGAGAAGGCTTCATCATCAACCCACCCGGCGC‑GTTATTTTTCACCTGTAATATTTCTGCCAGCACGCTAATGGCGATCGCCTGCGGCGTTTCCGCACCTATGTTGTAACCAACg < 4:595713/137‑1 (MQ=255)
accaccAGCTGGTGTCCGGAAGGATGAGAAGGCTTCATCATCAACCCACCCGGCGC‑GTTATTTTTCACCTGTAATATTTCTGCCAGCACGCTAATGGCGATCTCCTGCGGCGTTTCCGCACCTATGTTGTAACCAACggg < 2:666855/140‑1 (MQ=255)
accaccAGCTGGTGTCCGGAAGGATGAGAAGGCTTCATCATCAACCCACCCGGCGC‑GTTATTTTTCACCTGTAATATTTCTGCCAGCACGCTAATGGCGATCTCCTGCGGCGTTTCCGCACCTATGTTGTAACCAACg < 3:1030343/138‑1 (MQ=255)
accaccAGCTGGTGTCCGGAAGGATGAGAAGGCTTCATCATCAACCCACCCGGCGC‑GTTATTTTTCACCTGTAATATTTCTGCCAGCACGCTAATGGCGAGCTCCTGCGGCGTTTCCGCACCTATGTTGTAACCAACggg < 2:305236/140‑1 (MQ=255)
caGCTGGTGTCCGGAAGGATGAGAAGGCTTCATCATCAACCCACCCGGCGC‑GTTATTTTTCACCTGTAATATTTCTGCCAGCACGCTAATGGCGATCTCCTGCGGCGTTTCCGCACCTATGTTGTAACCAACGGgcgc < 3:929637/138‑1 (MQ=255)
cTGGTGTCCGGAAGGATGAGAAGGCTTCATCATCAACCCACCCGGCGC‑GTTATTTTTCACCTGTAATATTTCTGCCAg < 5:164128/78‑1 (MQ=255)
ggTGTCCGGAAGGATGAGAATGCTTCATCATCAACCCACCCGGCGC‑GTTATTTTTCACCTGTAATATTTCTGCCAGCACGCTAATGGCGATCTCCTGCGGCGTTTCCGCACCTATGTTGTAACCAACGGGCGCATGTa < 3:559584/138‑1 (MQ=255)
ggTGTCCGGAAGGATGAGAAGGCTTCATCATCAACCCTCCCGGCGC‑GTTATTTTTCACCTGTAATATTTCTGCCAGCACGCTAATGGCGATCTCCTGCGGCGTTTCCGCACCTATGTTGTAACCAACGGGCGCATGTa < 4:426309/138‑1 (MQ=255)
ggTGTCCGGAAGGATGAGAAGGCTTCATCATCAACCCACCCGGCGC‑GTTATTTTTCTCCTGTAATATTTCTGCCAGCACGCTAATGGCGATCTCCTGCGGCGTTTCCGCACCTATGTTGTAACCAACGGGCGCATGTaaa < 2:113270/140‑1 (MQ=255)
gccGGAAGGATGAGAAGGCTTCATCATCAACCCACCCGGCGC‑GGTATTTTTCACCTGTAATATTTCTGCCAGCACGCTAATGGCGATCTCCTGCGGCGTTGCCGCACCTATGTTGTAACCAACGGGCGCATGTAAACggg < 6:24774/139‑1 (MQ=255)
cGGAAGGATGAGAAGGCTTCATCATCAACCCACCCGGAGC‑GTTATTTTTCACCTGTAATATTTCTGCCAGCACGCTAATGGCGATCTCCTGCGGCGTTTCCTCACCTATGTTGTAACCAACGGGCGCATGTAAACGGGCa < 2:748708/140‑1 (MQ=255)
gAAGGATGAGAAGGCTTCATCATCAACCCACCCGGCGC‑GTTATTTTTCACCTGTAATATTTCTGCCAGCACGCTAATGGCGATCTCCTGCGGCGTTTCCGCACCTATGTTGTAACCAACGGGCGCATGTAAACGGGCAat < 8:105911/140‑1 (MQ=255)
aaGGATGAGAAGGCTTCATCATCAACCCACCCGGCGC‑GTTATTTTTCACCTGTAATATTTCTGCCAGCACGCTAATGGCGATCTCCTGCGGCGTTTCCGCACCTATGTTGTAACCAACGGGCGCATGTAAACGGGCAata < 1:987758/140‑1 (MQ=255)
ggATGAGAAGGCTTCATCATCAACCCACCCGGCGC‑GTTATTTTTCACCTGTAATATTTCTGCCAGCACGCTAATGGCGATCTCCTGCGGCGTTTCCGCACCTATGTTGTAACCAACGGGCGCATGTAAACGGGCAATATg < 2:851982/140‑1 (MQ=255)
gATGAGAAGGCTTCATCATCAACCCACCCGGCGC‑GGTATTTTTAACCGGTAATATTTATGCCCGCACCCGAATGGCGATATCCATCGGCGTTTGCGCCCCGATTTTGTAAACAACCGGCGCCTGTTAAAGGGCAATATGt > 6:205082/1‑140 (MQ=255)
tGAGAAGGCTTCATCATCAACCCACCCGGCGC‑GTTTTATTTACCCGGTAATATATCTGCCACCCCGCTAAAGGCGCTCAACAGCGGCGTTTCCCCACCTATGTTTTAACCAACGGGAGCATGTAAACGGGCAATAtttta > 2:809839/1‑139 (MQ=255)
agaAGGCTTCATCATCAACCCACCCGGCGC‑GTTATTTTTCACCTGTAATATTTCTGCCAGCACGCTAATGGCGATCTCCTGCGGCGTTTCCGCACCTATGTTGTAACCAACGGGCGCATGTAAACGGGCAATATGttctt < 7:655096/140‑1 (MQ=255)
agaAGGCTTCATCATCAACCCACCCGGCGC‑GTTATTTTTCACCTGTAATATTTCTGCCAGCACGCTAATGGCGATCTCCTGCGGCGTTTCCGCACCTATGTTGTAACCAACGGGCGCATGTAAACGGGCAATATGttc < 3:889086/138‑1 (MQ=255)
agaAGGCTTCATCATCAACCCACCCGGCGC‑GGTTTTTTTCACCGGGAATATTTATGGCCGCACGCGAAAGGCGATCAACAGCGGCGTTTCCGCACCTATTTTGTAACCAAAGGGCCCATGTAAACGGGGAATATGtta > 4:975853/1‑137 (MQ=255)
agaAGGCGTCCTCATCAACCCACCCGGCGC‑GTTATTTTTCACCTGTAATATTTCTTCCAGCACGCTAATGTCGATCTCCTGCGGCGTTTCCGCACCTATGTTGTAACCAACGGGCGCATGTAAACGGGCAATATGttctt < 5:658280/140‑1 (MQ=255)
ggCTTCATCATCAACCCACCCGGCGC‑GTTATTTTTCACCTGTAATATTTCTGCCAGCACGCTAATGGCGATCTCCTGCGGCGTTTCCGCACCTATGTTGTAACCAACGTGCGCATGTAAACGGGCAATATGTTCTTCAGc < 8:416995/140‑1 (MQ=255)
ggCTTCATCATCAACCCACCCGGCGC‑GTTATTTTTCACCTGTAATATTTCTGCCAGCACGCTAATGGCGATCTCCTGCGGCGTTTCCGCACCTATGTTGTAACCAACGGGCGCATGTAAACGGGCAATATGTTCTTCAGc < 1:1041814/140‑1 (MQ=255)
ggCTTCATCATCAACCCACCCGGCGC‑GTTATTTTTCACCTGTAATATTTCTGCCAGCACGCTAATGGCGATCTCCTGCGGCGTTTCCGCACCTATGTTGTAACCAACGGGCGCATGTAAACGGGCAATATGTGCTTCa < 3:111627/138‑1 (MQ=255)
ggCTTCATCATCAACACACCCGGAGC‑GTTATTTTTCACCTGTAATATTTCTTCAAGCACGCTAATGGAGATCTCCTGCGGCGTTTCCGCCCCTATGTTGTAACCAACGGGCTCATGTAAACGGGCAATATGTTCTTCa < 3:665257/138‑1 (MQ=255)
ttCATCATCAACCCACCCGGCGC‑GTTTTTTTTAACCGGTAATAATTCTGCCAGCAAGCTAATGGCCAACTACTGCGGCGATTCAGCACCTATGTTGTAACCAACGCGCGCAGGTAAACGGGAAATATTTTAATCAGGCAc > 8:337418/1‑140 (MQ=255)
ttCATCATCAACCCACCCGGCGC‑GGTATTTTTAACCGGGTATATTTGTGCCAGCACGCTAATGGGGATCGACTGCGGCGTTTGCGCCCCTATGTTGTAACCAACGGGCGCAAGTAAACGGGGAATATGGTATTCAGCCAc > 6:956950/1‑140 (MQ=255)
tcatcaACCCAGCCGGCGC‑GTTATTTTTCACCTGTAATATTTCTGCCAGCACGCTAATGGCGATATCCTGCGGCGTTTCCGCACCTATGTTGTAACCAACGGGCGCATGTAAACGGGCAATATGTTCTTCAGCCACGc < 3:702892/138‑1 (MQ=255)
acccacccGGCGC‑GTTATTTTTCACCTGTAATATTTCTGCCAGCACGCTAATGGCGATCTCCTGCGGCGTTTCCGCACCTATGTTGTAACCAACGGGCGCATGTAAACGGGCAATATGTTCTTCAGCCACGCCTTtct < 3:838943/138‑1 (MQ=255)
acccacccGGCGC‑GTTATTTTTCACCTGTAATATTTCTGCCAGCACGCTAATGGCGATCTCCTGCGGCGTTTCCGCACCTATGTTGTAACCAACGGGCGCATGTAAACGGGCAATATGTTCTTCAGCCACGCCTTTCTCa < 5:1060331/140‑1 (MQ=255)
acccaccaGGCGC‑GGTATTTTTCACCTGTAATATTTATGCCAGCACGCTAATGGCGATCTCATGCTGCGTTTCCGCAGCTATTTTGTAACCAACGGGCGCATGTAAACGGGCAATATGTTCTTCAGCCACGCCTTTCTCa < 5:510746/140‑1 (MQ=255)
acccGGCGC‑GTTATTTTTAACCTGTAATATTTCTGCCAGCACGCGAATGGCGATCTCCTGCGGCGGTTGCGCACCTATGTTGTAACCAACGGGCGCATGTAAACGGGCAATATGTTATTAAGCCACCCCGTTCTCACGcc > 6:277021/1‑139 (MQ=255)
gcgc‑GTTATTTTTCACCTGTAATATTTCTGCCAGCACGCTAATGGCGATCTCCTGCGGCGTTTCCGCACCTATGTTGTAACCAACGGGCGCATGTAAACGGGCAATATGTTCTTCAGCCACGCCTTTCTCACGCAATTgg < 7:514673/140‑1 (MQ=255)
cgc‑gTTATTTTTCACCTGTAATATTTCTGCCAGCTCGCTAATGGCGATCTCCTGCGGCGTTTGCGCACCTATGTTGTAACCAACGGGCGCTTGTAAACGGGCAATATGTTCTTCAGCCACGCCTTTCTCACGCAATTGgc < 8:468932/140‑1 (MQ=255)
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CACTTCCAACATGATCACTTTAAAACCCGCATGATACAGACGTAGCGCTACACCACTGGCGATATCCCCCGCACCGCGAATCACCACCAGCTGGTGTCCGGAAGGATGAGAAGGCTTCATCATCAACCCACCCGGCGC‑GTTATTTTTCACCTGTAATATTTCTGCCAGCACGCTAATGGCGATCTCCTGCGGCGTTTCCGCACCTATGTTGTAACCAACGGGCGCATGTAAACGGGCAATATGTTCTTCAGCCACGCCTTTCTCACGCAATTGGCGC > NZ_CP022686/1633707‑1633983
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| Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
N/A
