Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A6 F13 I0 R1
|
235 |
6960.4 |
9135780 |
98.4% |
8989607 |
135.7 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
freq |
annotation |
gene |
description |
| RA |
NZ_CP022686 |
1,633,846 |
T→G |
29.1% |
N253T (AAC→ACC) |
yqeB ← |
selenium‑dependent molybdenum cofactor biosynthesis protein YqeB |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NZ_CP022686 | 1,633,846 | 0 | T | G | 29.1%
| 185.8
/ 53.2
| 164 | N253T (AAC→ACC) | yqeB | selenium‑dependent molybdenum cofactor biosynthesis protein YqeB |
| Reads supporting (aligned to +/- strand): ref base T (27/84); new base G (48/2); total (78/86) |
| Fisher's exact test for biased strand distribution p-value = 4.80e-19 |
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 |
Only 100 of 165 total aligned reads displayed.
CACTTCCAACATGATCACTTTAAAACCCGCATGATACAGACGTAGCGCTACACCACTGGCGATATCCCCCGCACCGCGAATCACCACCAGCTGGTGTCCGGAAGGATGAGAAGGCTTCATCATCAACCCACCCGGCGCGTTATTTTTCACCTGTAATATTTCTGCCAGCACGCTAATGGCGATCTCCTGCGGCGTTTCCGCACCTATGTTGTAACCAACGGGCGCATGTAAACGGGCAATATGTTCTTCAGCCACGCCTTTCTCACGCAATTGGCGC > NZ_CP022686/1633707‑1633983
|
cACTTCCAACATGATCACTTTAAAACCCGCATGATACAGACGTAGCGCTACACCACTGGCGATATCCCCCGCACCGCGAATCACCACCAGCTGGTGTCCGGAAGGATGAGAAGGCATCATCATCAACCCACCCGGCGCGt < 6:565994/140‑1 (MQ=255)
aaCATGCTCACTTTAAAACCCGCATGATACAGACGTAGCGCTACACCACTGGCGATATCCCCCGCACCGCGAATCACCACCAGCTGGTGTCCGGAAGGATGAGAAGGCTTCATCATCAACCCACCCGGCGCGTTAttttt < 8:684388/140‑1 (MQ=255)
aaCATGATCACTTTAAAACCCGCATGATACAGACGTAGCGCTACACCACTGGCGATATCCCCCGCACCGCGAATCACCACCAGCTGGTGTCCGGAAGGATGAGAAGGCTTCATCATCAACCCACCCGGCGCGTTAttttt < 1:83771/140‑1 (MQ=255)
aCATGATCACTTTAAAACCCGCATGATACAGACGTAGCGCTACACCACTGGCGATATCCCCCGCACCGCGAATCACCACCAGCTGGTGTCCGGAAGGATGAGAAGGCTTCATCATCAACCCACCCGGCGCGTTAttttta > 1:537492/1‑139 (MQ=255)
aCATGATCACTTTAAAACCCGCATGATACAGACGTAGCGCTACACCACTGGCGATATCCCCCGCACCGCGAATCACCACCAGCTGGTGTCCGGAAGGATGAGAAGGCTTCATCATCAACCCACCCGGCGCGTTATTTTTc < 6:871757/140‑1 (MQ=255)
aTGATCACTTTAACACCCGCATGATACAGACGTAGCGCTACACCACTGGCGATATCCCCCGCACCGCGAATCACCACCAGCTGGTGTCCGGAAGTATGAGAAGGCTTCATCATCAACCCACCCGGCGCGTTATTTTTCAc < 6:50930/140‑1 (MQ=255)
aTGATCACTTTAAAACCCGCATGATACAGACGTAGCGCTACACCCCAGGCGATATCCCCCGCACCGCGAATCACCACCAGCTTGTGTCCGGAAGGATGAGAAGGCTTCATCATCAACCCACCCGGCGCGTTATTTTTc < 3:983859/138‑1 (MQ=255)
aTGATCACTTTAAAACCCGCATGATACAGACGTAGCGCTACACCACTGGCGATATCCCCCGCACCGCGAATCACCACCAGCTGGTGTCCGGAAGGATGAGAAGGCTTCATCATCAACCCACCCGGCGCGTTATTTTTCAc < 6:774788/140‑1 (MQ=255)
aTCACTTTAAAACCCGCATGATACAGACGTAGCGCTACACCACTGTCGATCTCCCCCGCACCGAGCATCACCACCAGCTGGTGTCCGGAAGGATGAGACGGCTTCATCATCAACCCACCCGGCGCTGGAtttttgagcgg > 8:1031318/1‑134 (MQ=255)
aTCACTTTAAAACCCGCATGATACAGACGTAGCGCTACACCACTGGCGATATCCCCCGCACCGCGAATCACCACCAGCTGGTGTCCGGAAGGATGAGAAGGCTTCATCATCAACCCACCCGGCGCGTTATTTTTCACCTg > 8:57671/1‑140 (MQ=255)
cACTTTAAAACCCGCATGATACAGACGTAGCGCTACACCACTGGCGATATCCCCCGCACCGCGAATCACCACCAGCTGGTGTCCGGAAGGATGAGAAGGCTTCATCATCAACCCACCCGGCGCGTTATTTTTCACCTGTa < 2:1160913/140‑1 (MQ=255)
gCATGATACAGACGTAGCGCTACACCACTGGCGATATCCCCCGCACCGCGAATCACCACCAGCTGGTGTCCGGAAGGATGAGAAGGCTTCATCATCAACCCACCCGGCGCGTTATTTTTCAc < 7:473094/122‑1 (MQ=255)
gCATGATACAGACGTAGCGCTACACCACTGGCGATATCCCCCGCACCGCGAATCACCACCAGCTGGTGTCCGGAAGGATGAGAAGGCTTCATCATCAACCCACCCGGCGCGTTATTTTTCACCTGTAATATTTCTGCCAg < 5:263006/140‑1 (MQ=255)
gCATGATACAGACGTAGCGCTACACCACTGGCGATATCCCCCGCACCGCGAATCACCACCAGCTGGTGTCCGGAAGGATGAGAAGGCTTCATCATCAACCCACCCGGCGCGTTATTTTTCACCTGTAATATTTCTGCCAg < 5:812135/140‑1 (MQ=255)
gCATGATACAGACGTAGCGCTACACCACTGGCGATATCCCCCGCACCGCGAATCACCACCAGCTGGTGTCCGGAAGGATGAGAAGGCTTCATCATCAACCCACCCGGCGCGTTATTTTTCACCTGTAATATTTCTGCCAg < 5:522457/140‑1 (MQ=255)
gCATGATACAGACGTAGCGCTACACCACTGGCGATATCCCCCGCACCGCGAATCACCACCAGCTGGTGTCCGGAAGGATGAGAAGGCTTCATCATCAACCCACCCGGCGCGTTATTTTTCACCTGTAATATTTCTGCCAg < 1:319049/140‑1 (MQ=255)
gCATGATACAGACGTAGCGCTACACCACTGGCGATATCCCCCGCACCGCGAATCACCACCAGCTGGTGTCCGGAAGGATGAGAAGGCTTCATCATCAACCCACCCGGCGCGTTATTTTTCACCTGTAATATTTCTGCCAg < 1:109432/140‑1 (MQ=255)
gCATGATACAGACGTAGCGCTACACCACTGGCGATATCCCCCGCACCGCGAATCACCACCAGCTGGTGTCCGGAAGGATGAGAAGGCTTCATCATCAACCCACCCGGCGCGGTATTTTTGACCGGTTATAATTATGCCac > 2:755050/1‑139 (MQ=255)
gCATGATACAGACGTAGCGCTACACCACTGGCGATATCCCCCGCACCGCGAATCACCACCAGCTGGTGTCCGGAAGGATGAGAAGGCTTCATCATCAACCCACCCGGCGCGGTATTTTTCACCTGTAATATTTCTGcc < 4:25956/138‑1 (MQ=255)
gCATGATACAGACGTAGCGCTACACCACTGGCGATATCCCCCGCACCGCGAATCACCACCAGCTGGTGTCCGGAAGGATGAGAAGGCTTCATCATCAACCCACCCGGCGCGGTATATTTAACCTGTATTAattaatgcac > 1:990551/1‑133 (MQ=255)
gCATGATACAGACGTAGCGCTACACCACTGGCGATATCCCCCGCACCGCGAATCACCACCAGCTGGTGTCCGGAAGGATGAGAAGGCTTCATCATCAACCCACCCGGCACGTTATTTTTAACCTGTAATATTTCTGCCAg > 8:768152/1‑140 (MQ=255)
ctGATTCAGACGTAGCGCTACACCACTGGCGATATCCCCCGCACCGCGAATCACCACCAGCTTGTGTCCGGAAGGATGAGAAGGCTTCATCATCAACCCACCCGGCGCGTTATTTTTCACCTGTAATATTTCTGCCAgaa < 6:510810/139‑3 (MQ=255)
aTGATACAGACGTAGCGCTACACCACTGGCGATATCCCCCGCACCGCGAATCACCACCAGCTGGTGTCCGGAAGGATGAGAAGGCTTCATCATCAACCCACCCGGCGCGTTATTTTTCa > 4:771706/1‑119 (MQ=255)
aTGATACAGACGTAGCGCTACACCACTGGCGATATCCCCCGCACCGCGAATCACCACCAGCTGGTGTCCGGAAGGATGAGAAGGCTTCATCATCAACCCACCCGGCGCGTTATTTTTCa < 3:771706/119‑1 (MQ=255)
aCGTAGCGCTACACCACTGGCGATATCCCCCGCACCGCGAATCACCACCAGCTGGTGTCCGGAAGGATGAGAAGGCTTCATCATCAACCCCCCCGGCGCGGGGGTTTTGAACAGTAATATTTGTGGCCGCACGcgtattg > 5:898874/1‑134 (MQ=255)
aCGTAGCGCTACACCACTGGCGATATCCCCCGCACCGCGAATCACCACCAGCTGGTGTCCGGAAGGATGAGAAGGCTTCATCATCAACCCACCCGGCGCGGTATTTTTAACCTGTAATATTTCTGCCCCCACACAAATgg > 6:973818/1‑140 (MQ=255)
gTAGCGCTACACCACTGGCGATATCCCCCGCACCGCGAATCACCACCAGCTGGTGTCCGGAAGGATGAGAAGGCTTCATCATCAACCCACCCGGCGCGTTATTTTTCACCTGTAATATTTCTGCCAGCACGCTAATgg < 4:141211/138‑1 (MQ=255)
gTAGCGCTACACCACTGGCGATATCCCCCGCACCGCGAATCACCACCAGCTGGTGTCCGGAAGGATGAGAAGGCTTCATCATCAACCCACCCGGCGCGTTATTTTTCACCTGTAATATTTCTGCCAGCACGCTAATGGCg < 2:461726/140‑1 (MQ=255)
gTAGCGCTACACCACTGGCGATATCCCCCGCACCGCGAATCACCACCAGCTGGTGTCCGGAAGGATGAGAAGGCTTCATCATCAACCCACCCGGCGCGTTATTTTTCACCTGTAATATTTCTGCCAGCACGCTAATGGCg < 2:581583/140‑1 (MQ=255)
gTAGCGCTACACCACTGGCGATATCCCCCGCACCGCGAATCACCACCAGCTGGTGTCCGGAAGGATGAGAAGGCTTCATCATCAACCCACCCGGCGCGTTATTTTTCACCTGTAATATTTCTGCCAGCACGCTAATGGCg < 6:127505/140‑1 (MQ=255)
gTAGCGCTACACCACTGGCGATATCCCCCGCACCGCGAATCACCACCAGCTGGTGTCCGGAAGGATGAGAAGGCTTCATCATCAACCCACCCGGCGCGTTATTTTTCACCTGTAATATTTCTGCCAGCACGCTAATGGCg < 8:440332/140‑1 (MQ=255)
gTAGCGCTACACCACTGGCGATATCCCCCGCACCGCGAATCACCACCAGCTGGTGTCCGGAAGGATGAGAAGGCTTCATCATCAACCCACCCGGCGCGTTATTTTTCACCTGTAATATTTCTGCCAGCACGCTAATGGCg < 1:33185/140‑1 (MQ=255)
gTAGCGCTACACCACTGGCGATATCCCCCGCACCGCGAATCACCACCAGCTGGTGGCCGGAAGGATGAGAAGGCTTCATCATCAACCCACCCGGCGCGTTATTTTTCACCTGTAATATTTCTGCCAGCACGCTAATgg < 4:474669/138‑1 (MQ=255)
tAGCGCTACACCACTGGCGATATCCCCCGCACCGCGAATCACCACCAGCTGGTGTCCGGAAGGATGAGAAGGCTTCATCATCAACCCACCCGGCGCGGTATTTTTACCCGGTAATATTTCTGCCCGCCCGCGAATGGCgg > 1:1072083/1‑139 (MQ=255)
gcgcTACACCACTGGCGATATCCCCCGCACCGCGAATCTCCACCAGCTGGTGTCCGGAAGGATGAGAAGGCTTCCTCATCAACCCACCCGGCGCGGTGTTTTTTACCTGGAATATTTCTGCCACCACGCGAATTGGGAtg > 5:468356/1‑139 (MQ=255)
gcgcTACACCACTGGCGATATCCCCCGCACCGCGAATCACCACCAGCTGGTGTCCGGAAGGATGCGAAGGCTTAATCATCAACCCACCCGGCGCGTTTTTTTTAACCATGAATTTTTAAGACAGCACGGGAAAGGCgtgg > 5:550987/1‑137 (MQ=255)
gcgcTACACCACTGGCGATATCCCCCGCACCGCGAATCACCACCAGCTGGTGTCCGGAAGGATGAGAAGGCTTCATCCTCAACCCCCACGGCGCGGTATTTTTCCCCTGTTATATTTCTTCCAGCAAGCTAAAGGCgg > 4:686705/1‑137 (MQ=255)
gcgcTACACCACTGGCGATATCCCCCGCACCGCGAATCACCACCAGCTGGTGTCCGGAAGGATGAGAAGGCTTCATCATCAACCCCCCCGGCGCGTTATTTTTGACCTGTAAATTTTATTCCAGCACGCTAATGGCGAta > 2:926308/1‑139 (MQ=255)
gcgcTACACCACTGGCGATATCCCCCGCACCGCGAATCACCACCAGCTGGTGTCCGGAAGGATGAGAAGGCTTCATCATCAACCCCCCCGGCGCGTGTTTTTTATACTGTTATATTTATGGCCGCACGAGAATggggctg > 7:705285/1‑135 (MQ=255)
gcgcTACACCACTGGCGATATCCCCCGCACCGCGAATCACCACCAGCTGGTGTCCGGAAGGATGAGAAGGCTTCATCATCAACCCACCCGGCGCGGTATTTTTTACCGGTAATATTTATGCCAGCCCGCTAATGGCGAtc > 1:480693/1‑140 (MQ=255)
gcgcTACACCACTGGCGATATCCCCCGCACCGCGAATCACCACCAGCTGGTGTCCGGAAGGATGAGAAGGCTTCATCATCAACCCACCCGGCGCGGTATTTTTGACCTGGATTATTTATGGCACCACCCGAATTGGGAtc > 6:420573/1‑140 (MQ=255)
gcgcTACACCACTGGCGATATCCCCCGCACCGCGAATCACCACCAGCTGGTGTCCGGAAGGATGAGAAGGCTTCATCATCAACCCACCCGGCGCGGTATTTTTGACCTGGAATATTTCTGCCAGCCCCCTAATGGCGCtc > 2:119933/1‑140 (MQ=255)
gcgcTACACCACTGGCGATATCCCCCGCACCGCGAATCACCACCAGCTGGTGTCCGGAAGGATGAGAAGGCTTCATCATCAACCCACCCGGCGCGGTATTTTTGACCGGTAATATTTGATCCAGCACGGTAAATGCGaga > 2:803289/1‑138 (MQ=255)
gcgcTACACCACTGGCGATATCCCCCGCACCGCGAATCACCACCAGCTGGTGTCCGGAAGGATGAGAAGGCTTCATCATCAACCCACCCGGCGCGGTATTTTTCACCGGGAATTTTTATGCCAGCACGGGAATGGCGCtc > 7:473810/1‑140 (MQ=255)
gcgcTACACCACTGGCGATATCCCCCGCACCGCGAATCACCACCAGCTGGTGTCCGGAAGGATGAGAAGGCTTCATCATCAACCCACCCGGCGCGGTAATTTTAACCTGTTATAATTATGCCACCCAGCGAATTGCGaac > 6:1089819/1‑138 (MQ=255)
gcgcTACACCACTGGCGATATCCCCCGCACCGCGAATCACCACCAGCTGGTGTCCGGAAGGATGAGAAGGCTTCATCATCAACCCACCCGGCGCGGGATTTTTTCACTGTTATATTTATTGTAGCACGCGAATGGCGAtg > 7:531600/1‑139 (MQ=255)
gcgcTACACCACTGGCGATATCCCCCGCACCGCGAATCACCACCAGCTGGTGTCCGGAAGGATGAGAAGGCTTCATCATCAACCCACCCGGCGCGGGATTTTTAACGGGTAATATTTCTGTCAGCACGCGAATTGGGAtc > 8:784222/1‑140 (MQ=255)
gcgcTACACCACTGGCGATATCCCCCGCACCGCGAATCACCACCAGCTGGTGTCCGGAAGGATGAGAAGGCTTCATCATCAACCAACCCGGCGCGGTATTGTTATCAGGTAATAATTATTCCAGACCGCCAATggtgc > 3:14528/1‑135 (MQ=255)
gcTACACCACTGGCGATATCCCCCGCACCGCGAATCACCACCAGCTGGTGTCCGGAAGGATGAGAAGGCTTCATCATCAACCCACCCGGCGCGGTATTTTTTACCTGTAATATTTCTGCCCGCACGCTAAAggggctc > 3:1140641/1‑133 (MQ=255)
caccacTGGCGATATCCCCCGCACCGCGAATCACCACCAGCTGGTGTCCGGAAGGATGAGAAGGCTTCATCATCAACCCACCCGGCGCGTTATTTTTAACAAGTAATATTTAATCCAGCCCGCGAATTGCGAtaacaagc > 7:427134/1‑133 (MQ=255)
accacTGGCGATATCCCCCGCACCGCGAATCACCACCAGCTGGTGTCCGGAAGGATGAGAAGGCTTCATCATCAACCCCCCCGGCGCGTTATTTTTCACCTGTAATATTTCTGCCAGCCCGCTAATGGCGATGTCCTg > 4:550985/1‑138 (MQ=255)
cTGGCGATATCCCCCGCACCGCGAATCACCACCAGCTGGTGTCCGGAAGGATGAGAAGGCTTCATCATCACCCCACCCGGCGCGTGATTTTTCACCAGGTATATTTATGCACGCACGCGAATGGCGCTCTCCAGCGGCGt > 2:285155/1‑140 (MQ=255)
cTGGCGATATCCCCCGCACCGCGAATCACCACCAGCTGGTGTCCGGAAGGATGAGAAGGCTTCATCATCAACCCACCCGGCGCGGTTTTTTTAACCGGTAATATTTATGCCACCCCGCGAATTGGGTTCTCCAgcggcgg > 7:527077/1‑139 (MQ=255)
cTGGCGATATCCCCCGCACCGCGAATCACCACCAGCTGGTGTCCGGAAGGATGAGAAGGCTTCATCATCAACCCACCCGGCGCGGTATTTTTTACCAGTAATATTTATTCCAGCACGCTAATTTCGATCAACTGAGGCGt > 1:321452/1‑140 (MQ=255)
gCGATATCCCCCGCACCGCGAATCACCACCAGCTGGTGTCCGGAAGGATGAGAAGGCTTCATCATCAACCCACCCGGCGCGTTATTTTTCACCTGTAATATTTCTGCCAGCACGCTAATGGCGATCTCCTGCGGCGtt < 4:606727/138‑1 (MQ=255)
cGATATCCCCCGCACCGCGAATCACCACCAGCTGGTGTCCGGAAGGATGAGAAGGCTTCATCATCAACCCACCCGGCGCGTTATTTTTCACCTGTAATATTTCTGCCAGCACGCTAATGGCGATCTCCTGCGGCGTTTcc < 5:765858/140‑1 (MQ=255)
cGATATCCCCCGCACCGCGAATCACCACCAGCTGGTGTCCGGAAGGATGAGAAGGCTTCATCATCAACCCACCCGGCGCGTTATTTTTCACCTGTAATATTTCTGCCAGCACGCTAATGGCGATCTCCTGCGGCGTTTcc < 5:873785/140‑1 (MQ=255)
gATATCCCCCGCACCGCGAATCACCACCAGCTGGTGTCCGGAAGGATGATAAGGCTTCATCATCAACCCACCCGGCGCGTTATTTTTCACCTGTAATATTTCTGCCAGCACTCTTATGGCGATCTCCTGCGGCGTTTCCg < 7:88602/140‑1 (MQ=255)
gATATCCCCCGCACCGCGAATCACCACCAGCTGGTGTCCGGAAGGATGAGAAGGCTTCATCATCAACCCACCCGTCGCGTTATTTTTCACCTGTAATATTTCTGCCAGCACGCTAATGGCGATCTCCTGCGGCGTTTc < 3:557458/138‑1 (MQ=255)
gATATCCCCCGCACCGCGAATCACCACCAGCTGGTGTCCGGAAGGATGAGAAGGCTTCATCATCAACCCACCCGGCGCGTTATTTTTGAACTGTAATATTTATGCCACCACGCGAAAGGCGGACTCCTGCGGCGgttg > 3:304677/1‑137 (MQ=255)
gATATCCCCCGCACCGCGAATCACCACCAGCTGGTGTCCGGAAGGATGAGAAGGCTTCATCATCAACCCACCCGGCGCGTTATTTTTCACCTGTAATATTTCTGCCAGCACGCTAATGGCGATCTCCTGCGGCGTTTCCg < 1:16614/140‑1 (MQ=255)
cccccGCACCGCGAATCACCACCAGCTGGTGTCCGGAAGGATGAGAAGGCTTCATCATCAACCCACCCGGCGCTTTATTTTTCACCTGTAATATTTCTGCCAGCACGCTAATGGCGATCTCCTGCGGCGTTTCCGCACCt < 1:726213/140‑1 (MQ=255)
cccccGCACCGCGAATCACCACCAGCTGGTGTCCGGAAGGATGAGAAGGCTTCATCATCAACCCACCCGGCGCGTTTTTTTTAACCAGTATTTTTTATTCCCGCACCCTAATGGCGATCTCCTGCGGCGTTTgcgccc > 3:648105/1‑136 (MQ=255)
cccccGCACCGCGAATCACCACCAGCTGGTGTCCGGAAGGATGAGAAGGCTTCATCATCAACCCACCCGGCGCGTTATTTTTCACCTGTAATATTTCTGCCAGCACGCTAATGGCGATCTCCTGCGGCGTTTCCGCAc < 3:57041/138‑1 (MQ=255)
cccccGCACCGCGAATCACCACCAGCTGGTGTCCGGAAGGATGAGAAGGCTTCATCATCAACCCACCCGGCGCGTTATTTTTCACCTGTAATATTTCTGCCAGCACGCTAATGGCGATCTCCTGCGGCGTTTCCGCACCt < 2:261153/140‑1 (MQ=255)
cccccGCACCGCGAATCACCACCAGCAGGTGTCCGGAAGGATGAGAAGGCTTCATCATCAACCCACCCGGCGCGTTATTTTTCACCTGTAATATTTCTGCCAGCACGCTAATGGCGATCTCCTGCGGCGTTTCCGCACCt < 5:481902/140‑1 (MQ=255)
ccGCACCGCGAATCACCACCAGCTGGTGTCCGGAAGGATGAGAAGGCTTCATCATCAACCCACCCGGCGCGTTATTTTTGACCAGTAATATTTATGCCAGCACGCTAATGGCGATCTCCTGCGGCGTTTACGCACCGAtt > 6:863440/1‑139 (MQ=255)
ccGCACCGCGAATCACCACCAGCTGGTGTCCGGAAGGATGAGAAGGCTTCATCATCAACCCACCCGGCGCGGGATTTTTAACCGGTAATATTTCTGCCCGCCCCCAAAAGGCGCTATCCTGCGGCGTTTCCGCCCCTaat > 7:358659/1‑138 (MQ=255)
gCACCGCGAATCACCACCAGCTGGTGTCCGGAAGGATGAGAAGGCTTCATCATCAACCCACCCGGCGCGGTATTTTTCCCCTGGTATATTTCTGCCAGCACGCTAATGGGCATCTCCTGCGGCGGTTGCGCCCCTAtt > 4:494502/1‑137 (MQ=255)
ccGCGAATCACCACCAGCTGGTGTCCGGAAGGATGAGAAGGCCTCATCATCAACCCACCCGGCGCGTTATTTTTCACCTGTAATATTTCTGCCAGCACGCTAATGGCGATCTCCTGCGGCGTTTCCGCACCTATGTTGTa < 1:145898/140‑1 (MQ=255)
cgcgAATCACCACCAGCTGGTGTCCGGAAGGATGAGAAGGCTTCATCATCAACCCACCCGGCGCGTTATTTTTCACCTGTAATATTTATGCCAGCACGCTAATGGCGATCTCCTGCGGCGTTTCCGCACCTAtgttgt > 4:1067089/1‑138 (MQ=255)
cgcgAATCACCACCAGCTGGTGTCCGGAAGGATGAGAAGGCTTCATCATCAACCCACCCGGCGCGGTTTTTTTAACATGGAATATTTGTGGCACCCCCCGTATGGGGCTCTACAGCGGCGGTTCAGCACCAAttttgt > 3:1086445/1‑138 (MQ=255)
cgAATCACCACCAGCTGGTGTCCGGAAGGATGAGAAGGCTTCATCATCAACCCACCCGGCGCGATATTTTTCACCTGTAATATTTAGGCCAGCACGCTAATGGCGATCTCCTGCGGCGTTTCCGCACCTATGTTGTAAcc > 8:784173/1‑140 (MQ=255)
cgAATCACCACCAGCTGGTGTCCGGAAGGATGAGAAGGCGTCATCATCACCCCACCCGGCGCGGTGTTTTTAACCGGTAATATTTATGCCACCACGCAAATTGCGGTAACCAGCGGCGGGTCCGCACCGAtgttggtacc > 1:505447/1‑135 (MQ=255)
aaTCACCACCAGCTGGTGTCCGGAAGGATGAGAAGGCTTCATCATCAACCCACCCGGCGCGGTTTTTTTTACCGGTTATATTTTTGCCCGCCCGCGAATTGGGCTGTCCGGCGGCGGTTGCGCCCCGAtgttgttaac > 4:1162711/1‑134 (MQ=255)
accaccCGCTGGTGTCCGGAAGGATGAGAAGGATTCATCATCAACCCACCCGGCGCGTTCTTTTTCAACTGTAATATTTCTGCCAGCACGCTAATGGCGATCTCCTGCGGCGTTTCCGCACCTATGTTGTAACCAACggg < 1:925982/140‑1 (MQ=255)
caccaGCTGGTGTCCGGAAGGATGAGAAGGCTTCATCATCAACCCACCCGGCGCGTTATTTTTCACCTGTAATATTTCTGCCAGCACGATAATGGCGATCTCCTGCGGCGGTTCCGCACCTTTGTTGTAACCAACGGgcg < 1:405008/140‑1 (MQ=255)
caccaGCTGGTGTCCGGAAGGATGAGAAGGCTTCATCATCAACCCACCCGGAGCGGTATTTTTCACCTGTAATATTTCTTCCAGAACGCTAATGGCGATCTCCTGCGGCGGTTCCGCACCTATGTTGTAACCAACGGgcg > 8:714304/1‑140 (MQ=255)
caccaGCTGGTGTCCGGAAGGATGAGAAGGCTTCATCATCAACCAACCCGGCGCGTTATTTTTCACCTGTAATATTTCTGCCAGCACGCTAATGGCGATCTCCTGCGGCGTTTCCGCACCTATGTTGTAACCAACggg < 3:857138/138‑1 (MQ=255)
caGCTGGTGTCCGGAAGGATGAGAAGGCTTCATCATCAACCCACCCGGCGCGTTATTTTTCACCTGTAATATTTCTGCCAGCACGCTAATGGCGATCTCCTGCGGCGTTTCCGCACCTATGTTGTAACCAACGGGCGCAt < 1:796524/140‑1 (MQ=255)
ggTGTCCGGAATGATGAGAAGGCTTCATCATCAACCCACCCGGCGCGTTATTTATCACCTGTAATATTTCTGCCAGCACGCTAATGGCGATCTCCTGCGGCGTTTCCGCACCTATGTTGTATCCAACGGGCGCATGTaaa < 7:834454/140‑1 (MQ=255)
ggTGTCCGGAAGGATGAGAAGGCTTCATCATCAACCCACCCGGCGCGTTATTTTTCACCTGTAATATTTCTGCCAGCACGCTAATGGCGATCTCCTGCGGCGTTTCCGCACCTATGTTGTAACCAACGGGCGCATGTaaa < 2:453233/140‑1 (MQ=255)
ggTGTCCGGAAGGATGAGAAGGCTTCATCATCAACCCACCCGGCGCGTTATTTTTCACCTGTAATATTTCTGCCAGCACGCTAATGGCGATCTCCTGCGGCGTTTCCGCACCTATGTTGTAACCAACGGGCGCATGTaaa < 7:57671/140‑1 (MQ=255)
ggTGTCCGGAAGGATGAGAAGGCTTCATCATCAACCCACCCGGCGCGTTATTTTTCACCTGTAATATTTCTGCCAGCACGCTAATGGCGATCTCCTGCGGCGTTTCCGCACCTATGTTGTAACCAACGGGCGCATGTaaa < 2:220753/140‑1 (MQ=255)
ggTGTCCGGAAGGATGAGAAGGCTTCATCATCAACCCACCCGGCGCGGTATTTTTGACCTGTAATATTTCTTCCAGCACGCGAATGGCGATCTCCAGCGGCGTTTACGCCCCTATGTTGTTAAAAACCGGCGCATGGaaa > 5:215704/1‑140 (MQ=255)
tatCCGGAAGGATGAGAAGGCTTCATCATCAACCCACCCGGCGCGGTTTTTTTAACCAGTAATATTTATTCCAGCACGCTAATGGCGCTCACCGGCGGCGTTTCCGCACCGAAGTTTTAACCAACGGGGGCAAGGAAAcc > 7:731440/3‑139 (MQ=255)
gtCCGGAAGGATGAGAAGGCTTCATCATCAACCCACCCGGCGCGTTATTTTTCACCTGTAATTTTTCTGACAGCACGCTAATGGAGATCTCCTGCGGCGTTTCCGCACCTATGTTGTAACCAACGGGCTCATGTAAActg < 6:969234/140‑3 (MQ=255)
cGGAAGGATGAGAAGGCTTCATCATCAACCCACCCGGCGCGTTATTTTTCACCTGTAATATTTCTGCCAGCACGCTAATGGCGATCTCCTGCGGCGTTTCCGCACCTATGTTGTAACCAACGGGCGCATGTAAACggg < 3:329359/138‑1 (MQ=255)
gAAGGATGAGAAGGCTTCATCATCAACCCACCCGGCGCGTTAATTTTCACCAGTAATATTTATGCCAGCACGCTAATTGCGATCAACTGCGGCGTTTCCGCCCCAATGTTGTAACCAACGGGCGCATGTAAACGGGCa > 4:651938/1‑138 (MQ=255)
aaGGATGAGAAGGCTTCATCATCAACCCACCCGGCGCGTTATTTTTCACCTGTAATATTTCTGCCAGCACGCTAATGGCGATCTCCTGCGGCGTTTCCGCACCTATGTTGTAACCAACGGGCGCATGTAAACGGGCAata < 6:218889/140‑1 (MQ=255)
tGAGAAGGCTTCATCATCAACCCACCCGGCGCGGTTTTTTTAACCCGTTATATTTATTCCCGCCCGCTAATGGCGCTATCCGGCGGCGGTTTCGCCCCAATGTTGTAACCAAACGGGGCATGTATAAGGGCAATATGttt > 1:885553/1‑139 (MQ=255)
gagaAGGCTTCATCATCAACCCACCCGGCGCGTTATTTTTCACCTGTAATATTTCTGCCAGCACGCTAATGGCGATCTCCTGCGGCGTTTCCGCACCTATGTTGTAACCAACGGGCGCATGTAAACGGGCAATATGtt < 4:959380/138‑1 (MQ=255)
ggCTTCATCATCAACCCACCCGGCGAGTTATTTTTCACCTGTAATATTTCTGCCAGCACGCTAATGGCGATCTCCTGCGGCGTTTCCGCACCTATGTTGTAACCAACGGGCGCATGTAAACGGGCAATATGTTCTTCa < 3:854038/138‑1 (MQ=255)
gCTTCATCATCAACCCACCCGGCGCGTTATTTTTCACCTGTAATATTTCTGCCAGCACGCTAATGGCGATCTCCTGCGGCGTTTCCGCACCTATGTTGTAACCAACGGGCGCATGTAAACGGGCAATATGTTCTTAAGcc < 8:358659/140‑1 (MQ=255)
catcatcaACCCACCCGGCGCGTTTTTTTTGACCGCTAAAATTTAGGCCATCACAGAAAAGGAGAAAACCTCCCGCGGTTACTCCCCTAACTTTTAACCAAACGGCGCATGTTAACGTGCAATTTGTTCTTCATCCAc > 4:426673/1‑138 (MQ=255)
atcatcaACCCACCCGGCGCGGTATTTTTAACCGGTAATATTTATGCCAGCACCCGAATGGCGATCTCCAGCGGCGGTTACCCCCCTATGTTGTAACCAACGGGCGCATTTTAAAGGGCAATATGTTCTTAAGCCCCGcc > 6:938894/1‑140 (MQ=255)
caACCCACCCGGCGCGTTATTTTTCACCTGTAATATTTCTGCCAGCACGCTAATGGCGATCTGCTTCGGCGTTTCCGCACCTATGTTGTAAACTACGGGCGCATGTAAACGGGCAATATGTTCTTCAGCCACGCCTTtct < 8:175074/140‑1 (MQ=255)
cgcgGTATTTTTCACCTGTAATATTTCTGCCAGCACGCTAATGGCGATCTCCTGCGGCGTTTCCGCACCTATGTTGTAACCAACGGGCGCATGTAAACGGGCAATATGTTGTTCAGCCACGCCTTTCTCACGCAATTGgc > 8:459868/1‑140 (MQ=255)
gcgTTATTTTTCACCTGTAATATTTCTGCCAGCACGCTAATGGCGATCTCCTGCGGCGTTTCCGCACCTATGTTGTAACCAACGGGCGCATGTAAACGGGCAATATGTTCTTCAGCGACGCCTTTCTCACGCAATTGgcg < 5:185598/140‑1 (MQ=255)
cgTTATTTTTCACCTGTAATATTTCTGCCAGCACGCTAATGGCGATCTCCTGCGGCGTTTCCGCACCTATGTTGTAACCAACGGGCGCATGTAAACGGGCAATATGTTCTTCAGCCTCGCCTTTCTCACGCAATTGgcgc < 7:1084465/140‑1 (MQ=255)
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CACTTCCAACATGATCACTTTAAAACCCGCATGATACAGACGTAGCGCTACACCACTGGCGATATCCCCCGCACCGCGAATCACCACCAGCTGGTGTCCGGAAGGATGAGAAGGCTTCATCATCAACCCACCCGGCGCGTTATTTTTCACCTGTAATATTTCTGCCAGCACGCTAATGGCGATCTCCTGCGGCGTTTCCGCACCTATGTTGTAACCAACGGGCGCATGTAAACGGGCAATATGTTCTTCAGCCACGCCTTTCTCACGCAATTGGCGC > NZ_CP022686/1633707‑1633983
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| Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
N/A
