Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A10 F35 I0 R1
|
195 |
10216.4 |
8585726 |
98.3% |
8439768 |
135.8 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
freq |
annotation |
gene |
description |
| RA |
NZ_CP022686 |
3,925,289 |
A→C |
12.6% |
N156T (AAC→ACC) |
prpC → |
2‑methylcitrate synthase |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NZ_CP022686 | 3,925,289 | 0 | A | C | 12.6%
| 312.9
/ 7.9
| 176 | N156T (AAC→ACC) | prpC | 2‑methylcitrate synthase |
| Reads supporting (aligned to +/- strand): ref base A (101/46); new base C (2/25); total (103/73) |
| Fisher's exact test for biased strand distribution p-value = 1.59e-09 |
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 |
Only 100 of 183 total aligned reads displayed.
ATGCGCACCGGCGTTTCCGCGCTCGGCTGCACGCTGCCAGAAAAAGAGGGGCACACCGTTTCTGGTGCGCGGGATATTGCCGACAAACTGCTGGCGTCACTTAGTTCGATTCTTCTCTACTGGTATCACTACAGCCACAACGGCGAACGCATCCAGCCGGAAACTGATGACGACTCTATCGGCGGTCACTTCCTGCATCTGCTGCACGGCGAAAAGCCGTCGCAAAGCTGGGAAAAGGCGATGCATATCTCGCTGGTGCTGTACGCCGAACACGAGTTT > NZ_CP022686/3925150‑3925428
|
aTGCGCACCGGCGTTTCCGCGCTCGGCTGCACGCTGCCAGAAAAAGAGGGGCACACCGTTTCTGGTGCGCGGGATATTGCCGACAAACTGCTGGCGTCACTTAGTTCGATTCTTCTCTACTGGTATCACTACAGCCACaa > 8:184825/1‑140 (MQ=255)
tGCGCACCGGCGTTTCCGCGCTCGGCTGCACGCTGCCAGAAAAAGAGGGGCACACCGTTTCTGGTGCGCGGGATATTGCCGACAAACTGCTGGCGTCACTTAGTTCGATTCTTCTCTACTGGTATCACTTCAGCCACAAc > 2:358129/1‑140 (MQ=255)
tGCGCACCGGCGTTTCCGCGCTCGGCTGCACGCTGCCAGAAAAAGAGGGGCACACCGTTTCTGGTGCGCGGGATATTGCCGACAAACTGCTGGCGTCACTTAGTTCGATTCTTCTCTACTGGTATCACTACAGCCACAAc > 8:509003/1‑140 (MQ=255)
gcgcACCGGCGTTTCCGCGCTCGGCTGCACGCTGCCAGAAAAAGAGGGGCACACCGTTTCTGGTGCGCGGGATATTGCCGACAAACTGCTGGCGTCACTTAGTTCGATTCTTCTCTACTGGTATCACTACAGCCACaa > 6:935093/1‑138 (MQ=255)
cgcACCGGCGTTTCCGCTCTCGGCTGCACGCTGCCAGAAAAAGAGGGGCACACCGTTTCTGGTGCGCGGGATATTGCCGACAAACTGCTGGCGTCACTTAGTTCGATTCTTCTCTACTGGTATCACTACAGCCACAACgg < 2:53412/140‑1 (MQ=255)
ccccGGCGTTTCCGCGCTCGGCTGCACGCTGCCCGAAAAAGAGGGGCCCACCGTTTCTGGTGCGCGGGATATTGCCGCCAAACGGCTGGCGTCACTTAGTTCGATTCTTCTCTACTGGTATCACTACAGCCACACCGGcc > 8:867281/3‑139 (MQ=255)
cACCGGCGTTTCCGCGCTCGGCTGCACGCTGCCAGAAAAAGAGGGGCACACCGTTTCTGGTGCGCGGGATATTGCCGACAAACTGCTGGCGTCACTTAGTTCGATTCTTCTCTACTGGTATCACTACAGCCACAACGGCg > 2:728007/1‑140 (MQ=255)
cACCGGCGTTTCCGCGCTCGGCTGCACGCTGCCAGAAAAAGAGGGGCACACCGTTTCTGGTGCGCGGGAGATTGCCGACAAACTGCTGGCGTCACTTAGTTCGAGTCTTCTCTACTGGGATCACTACAGCCCCAACGGCg > 3:638151/1‑140 (MQ=255)
aCCGGCGTTTCCGCGCTCGGCTGCACGCTGCCAGAAAAAGAGGGGCACACCGTTTCTGGTGCGCGGGATATTGCCGACAAACTGCTGGCGTCACTTAGTTCGATTCTTCTCTACTGGTATCACTACAGCCACAACGGCGa > 4:1018350/1‑140 (MQ=255)
ccGGCGTTTCCGCGCTCGGCTGCACGCTGCCAGAAAAAGAGGGGCCCCCCGTTTCTGGTGCGCGGGATATTGCCGACAAACTGCTGGCGTCACTTAGTTGGGGTGTTCTCTAATGGGATGACTACAGCCACACCGGCg > 5:83167/1‑138 (MQ=255)
ccGGCGTTTCCGCGCTCGGCTGCACGCTGCCAGAAAAAGAGGGGCACACCGTTTCTGGTGCGCGGGATATTGCCGACAAACTGCTGGCGTCACTGAGTTCGATTCTTCTCTACTGGTATCACTACAGCCACAACGGCg > 6:850557/1‑138 (MQ=255)
cGGCGTTTCCGCGCTCGGCTGCACGCTGCCAGAAAAAGAGGGGCACACCGTTTCTGGTGCGCGGGATATTGCCGACAAACTGCTGGCGTCACTTAGTTCGATTGTTCTCTACTGGTATCACTACAGCCACAACGGCGAAc > 7:14995/1‑140 (MQ=255)
gttCCGCGCTCGGCTGCACGCTGCCAGAAAAAGCGGGGCACACCGTTTCTGGTGCGCGGGATATTGCCGACAAACTGCTGGCGTCACTTAGTTCGATTCTTCTCTACTGGTATCACTACAGCCACAACGGCGAACGCATc < 1:1036172/139‑1 (MQ=255)
gcgcTCGGCTGCACGCTGCCAGAAAAAGAGGGGCACACCGTTTCTGGTGCGCGGGATATTGCCGACAAACTGCTGGCGTCACTTAGTTCGATTCTTCTCTACTGGTATCACTACAGCCACAACGGCGCGCGAATCCAGcc > 8:271062/1‑140 (MQ=255)
cTCGGCTGCACGCTGCCAGAAAAAGAGCGGCACACCGTTTCTGGGGCGCGGGATATTGCCGACAAACTGCTGGCGTCACTTAGTTCGATTCTTCTCTACTGGTATCACTACAGCCACAACGGCGAACGCATCCAGCCg < 6:424851/138‑1 (MQ=255)
cGGCTGCACGCTGCCAGAAAAAGAGGGGCACACCGTTTCTGGTGCGCGGGATATTGCCGACAAACTGCTGGCGTCACTTAGTTCGATTCTTCTCTACTGGTATCACTACAGCCACAACGGCGAACGCATCCAGCCGGaaa < 7:947147/140‑1 (MQ=255)
aCGGTGCCAGAAAAAGAGGGGCACACGGTTTGTGGTGCGGGGGATATTGCCGACAAACTGCTGGCGTAATTTAGTTCGATTTTTCTCTAGTGGTATCACTACAGCCAAAACGGCGAACGCATCCAGCCGTAAACtgatga < 4:487944/140‑1 (MQ=255)
cgcgGCCATAAAATCAGGGGCACATCGTTTTTGGTGGGGGGTATATTGCCTAAAACCTGCGGGCGTCATTTAGTTCTATTCTTCTCTATTGGTATCAATAAAGACACAACGGCGAACGCATCCAGCCGTAAAGtgatg < 6:1031718/138‑1 (MQ=255)
cGCTGCCAGAAAAAGAGGGGCACACCGTTTCTGGTGCGCGGGATATTGCCGACAAACTGCTGGCGTCACTTAGTTCTATTCTTCTCTACTGTTATCACTACAGCCACAACGGCGAACGCATCCAGCCGTAAACtgatg < 6:100634/138‑1 (MQ=255)
tGCCAGAAAAAGAGGGGCACACCGTTTCTGGTGCGCGGGATATTGCCGACAAACTGCTGGCGTCACTTAGTTCGATTCTTCTCTACTGGTATCACTACAGCCACAACGGCGAACGCCTCCAGCCGGAAACTGATgacgac > 2:118668/1‑140 (MQ=255)
tGCCAGAAAAAGAGGGGCACACCGTTTCTGGTGCGCGGGATATTGCCGACAAACTGCTGGCGTCACTTAGTTCGATTCTTCTCTACTGGTATCACTACAGCCACAACGGCGAACGCATCCAGCCGGAAACTGATgacgac > 7:464782/1‑140 (MQ=255)
gCCAGAAAAAGAGGGGAACACCGTTGCTGGTGCGCGGGATATTGCCGAAAAACTGCTGGCGTCACTTAGTTCGATTCTTCTCTACTGGTATCACTCCACCCACAACGGCGAACGCAGCCTGCCGTAAACTGATGACGAct < 4:280971/140‑1 (MQ=255)
ccAGAAAAAGAGGGGCACACCGTTTCTGGTGCGCGGGATATTGCCGACAAACTGCTGGAGTCACTTAGTTCGCTTCTTCTCTAGTGGTATCACTACAGCCACAACGGCCAACGCATCCAGCGGGAAACTGATgccgac > 5:1006153/1‑138 (MQ=255)
ccAGAAAAAGAGCGGCACACCGTTTCTGGAGCGCGGGATATTGCCGACAAACTGCAGGCGTCACTTAGTTCGATAATACTCTACAGGTATCACTACAGCCACAACGGCGAACGCATCCAGCCGCATACTGATgacgacac > 8:955502/1‑138 (MQ=255)
aGAAAAAGAGGGGCACACCGTTTCTGGTGCGCGGGATATTGCCGACAAACTGCTGGCGTCACTTAGTTCGATTCTTCTCTACTGGTATCACTACAGCCACAACGGCGAACGCATCCAGCCGGAAACTGATGACGActc > 6:592290/1‑138 (MQ=255)
tgagGGGCACCCCGTTTCTGGTGCGCGGGATATTGCCGACAAACTCCTGGCGTCACTTAGTTCGATTCTTCTCTACTGGTATCACTACAGCCACAACGGCGAACGCATCCAGCCGGAAACTGATGACGACTCTATcggcg < 2:920967/139‑1 (MQ=255)
tggggCACACCTTTTCTGGTGCGCGGTATATTGCCGACAAACTGCTGGCGTCACTAAGTTCGATTATACTCTCCGGGAAACACAACACCCACAACGCCTAACCAAGCCACCCGCAAACTTAGCACGACTCTATcggcg < 6:298297/137‑1 (MQ=255)
gggggCAAACGGTTGCTGGGCCGGGGTATATTGCCCACAAAATGCTGGCGTCACTTAGTTCGATTCTTGTATACTGTTCGCACTACAGCCACACCGGCTAACGAAGCCCGCCGTAATCTGATGACGACTCTATCGGCGGt < 4:406344/139‑1 (MQ=255)
cggggCACACCGTTTGGGGTGCGTGGGATTTTGCCGACAAACTGCTGGCTTAACTTTGTTCGATTCTTCTCTACTGTTATCACTACCCCCACACCGGCTAACGCATCCCCCCGGAAACTGATGACGACTCTATcggcg < 6:32991/137‑1 (MQ=255)
agGGGCACACCGTTTCTGGTGCGCGTGATATTGCCGACAAACTTCTGGCGTCACTTAGTTCGATTCTTATCTACTCTTATAACAACAGCAACAACTGCGAACGACTCCAGCCGGAAACTGATGACGACTCTATCCGAGGt > 1:716349/1‑140 (MQ=255)
gggCACACCGTTTCTGGTGCGCGGGATATTGCCGACAAACTGCTGGCGTCACTTAGTTCGATTCTTCTCTACTGGTATCACTACAGCCACAACGGCGAACGCATCCAGCCGGAAACTGATGACGACTCTATCGGCGGt > 6:874589/1‑138 (MQ=255)
cccggTTTCGGGTGCGGGGGATATTGCCGACAAACTGGTGGCGTAACTTAGTTCGATTCTTCTCTACTGGTATCAATACCGCCACACCGGCTAACGCAGCCAGCCGTAAACTGATGACGACTCTATCGGCGGTCACTTcc < 2:1081160/136‑1 (MQ=255)
ccccGTATCTGGGGCGCGGGATATTGCCTCCAAAGGGCGGGCGTACCTAAGTTCGATTCTTCTCTACTGTTATCACTACTGCCAAAACGGCTACCGCATCAACCCGGAAACTGATGACGACTCTATCGGCGGTCACTTcc < 8:704533/138‑1 (MQ=255)
acCGTATCAGGTGCGCGGGATATTGCCGACAAACTGCGGGCGTCACTTAGTTCGATTATTCTCTAATCGAAACAATACAGCCACAACGGCTAACGCATCCACCCGGAAACTGATGACTACTCAAACGGCGGTCACTTCCt > 1:1006151/1‑140 (MQ=255)
gTGCGCGGGATATTGCCGACAAACTGCTGGCGTCACTTAGTTCGATTCTTCTCTACTGGTATCACTACAGCCACAACGGCGAACGCATCCAGCCGGAAACTGATGACGACTCTATCGGCGGTCACTTCCTGCATctgctg > 1:942187/1‑140 (MQ=255)
gggggttatatTGCCGAAAAATTGCGGGCGTCATTTAGTTCTATTTTTCTCTACTGTTATCACTACAGCCAAAACGGCTAACGCATCCAGCCGTAAACTGATGACGACTCTATCGGCGGTCACTTCCTGCATCTGCTGCa < 7:87184/133‑1 (MQ=255)
gcgcGGTATATTGCCTACAACCTGCGGGCGTCACTTAGTTCTATTCTTCTATACTGGTAACACTACCCCCACACCGGCGAACGCATCCCGCCGTAAACTGATCACGACTCTATCGGCGGTCACTTCCTGCATCTGCTGCa < 1:2090/140‑1 (MQ=255)
gcgcGGTATATAGCCTACAAACTGCTGGCGTCATTAAGTTCTATGCTTCTCAACTGGTAAAACTACAGCAACACCGGCGAACGCATCCAGCCTGAAACTGATGACGACTCTATCGGCGGTCACTTCCTGCATCTGCTGCa < 4:209180/140‑1 (MQ=255)
gcgcGGGATATTGCCGACAAACTGCTGGCGTCACTTAGTTCGATTCTTCTCTACTGGTTTCACTACCGCCACAACCGCGAACGCATCCAGCCGGAAACTTATGACGACTCTATCGGCGGTCACTTCCTGCATCTGCTGCa > 7:324815/1‑140 (MQ=255)
gcgcGGGATATTGCCGACAAACTGCTGGCGTCACTTAGTTCGATTCTTCTCTACTGGTATCACTACAGCCACAACGGCGAACGCATCCAGCCGGAAACTGATGACGACTCTATCGGCGGTCACTTCCTGCATCtgctgcc > 1:311024/1‑139 (MQ=255)
gcgcGGGATATTGCCGACAAACTGCTGGCGTCACTTAGTTCGATTCTTCTCTACTGGTATCACTACAGCCACAACGGCGAACGCATCCAGCCGGAAACTGATGACGACTCTATCGGCGGTCACTTCCTGCATCTGCTGCa > 3:578873/1‑140 (MQ=255)
gcgcGGGATATTGCCGACAAACTGCTGGCGTCACTTAGTTCGATTCTTCTCTACTGGTATCACTACAGCCACAACGGCGAACGCATCCAGCCGGAAACTGATGACGACTCTATCGGCGGTCACTTCCTGCATCTGCTGCa > 1:501654/1‑140 (MQ=255)
gcgcGGGATATTGCCGACAAACTGCTGGCGTCACTTAGTTCGATTCTTCTCTAATGGTATCACTACAGCCACAACGGCGAACGCATCCAGCCGGAAACTGATGACGACTCTATCGGCGGTCACTTCCTGCATCTGCTGCa > 3:706582/1‑140 (MQ=255)
gcgcGGGATATTGCCGACAAACTGCTGGCGTCACTTAGTTCGATTATTCTATAATGGTATCACTACAGCCACAACGGCGAACGCATCCAGCCGGAAACTTATGACGACTCTATCGGAGGTCACTTACTGCATCtgctgcc > 2:358256/1‑139 (MQ=255)
ggcgGGATATTGCCGACAAACGGCTGGCGTCACTTAGTTCTATTCTTCTCTACTGGTATCACAACAGCCACACCGGCGAACGCATCCAGCCGCAAACTGATGACGACTCTATCGGCGGTCACTTCCTGCATCTGCTGCAc < 3:1074748/139‑1 (MQ=255)
gcgGGATATTGCCGACAAACTGCTGGCGTCACTTAGTTCGATTCTTCTCTACTGGTTTCACTACAGCCACAACGGCGAACGCATCCAGCCGGAAACTGATGACGACTCTATCGGCGGTCACTTCCTGCATCTGCTGCa > 5:12939/1‑138 (MQ=255)
cgGGATATTGCCGACAAACTGCTGGCGTCACTTAGTTCGATTCTTCTCTACTGGTATCACTACAGCCACAACGGCGAACGCATCCAGCCGGAAACTGATGACGACTCTATCGGCGGTCACTTCCTGCATCTGCTGCACgg > 3:675045/1‑140 (MQ=255)
tccctaCAATCTGCGGGCTTCACTTAGTTCTATTCTTGGCTTCTGGTATCACTACCCCCACAACGGCGAACGAAGCCCGCCGGAAACTGAGCACGACTCTATCGGCGGTCACTTCCTGCATCTGCTGCACGGCGAAAAGc < 8:611955/135‑1 (MQ=255)
tGCCGACAAACGGCGGGCGGCAATACGTTCTATTCTTCTCTACTGGTATCACAACCCCCACAACGGCTAACGCATCCAGCCGGAAACTGATGACGACTCTATCGGCGGTCACTTCCTGCATCTGCTGCACGGCGAAAAGc < 8:378760/140‑1 (MQ=255)
aCAAACTGCTGTCGTCACTTAGTTCGATTCTTCTCTACTGGTATCACTACAGCCACAACGGCGAACGCATCCCGCCGGAAACTGATGACGACTCTATCGGCGGTCACTTCCTGCCTCTGCTGCACGGCGAAACGCCGTCg > 2:602957/1‑140 (MQ=255)
aCAAACTGCTGGCTTCACTTAGTTCGATTCTTCTCTACTGGTATCACTACAGCCACAACGGCGAACGCATCCAGCCGGAAACTGATGACGACTCTATCGGCGGTCACTTCCTGCATCTGCTGCCCGGCGAAAAGCCGTCg > 8:420158/1‑140 (MQ=255)
aCAAACTGCTGGCGTCACTTAGTTCGATTCTTCTCTACTGGTATCACTACAGCCACCACGGCGAACGCATCCCGCCGGAAACTGATGACGACTCTATCGGCGGTCACTTCCTGCATCTGCTGCACGGCGAAAAGCCGTcc > 1:156904/1‑139 (MQ=255)
aCAAACTGCTGGCGTCACTTAGTTCGATTCTTCTCTACTGGTATCACTACAGCCACAACGGCGAACGCAAACAGCCGGAAACTGATGACGACTCTATCTGCGCTCACTTCCTGCATCTGCTGCACGGCGAAAAGCCGTCg > 7:995939/1‑140 (MQ=255)
aCTGCTGGCGTCACTTAGTTCGATTCTTCTCTACTGGTATCACTACAGCCACAACGGCGAACGCATCCAGCCGGAAACTGATGACGACTCTATCGGCGGTCACTTCCTGCATCGGCTGCACGGCGAAAAGCCGTCGCaaa > 7:225727/1‑140 (MQ=255)
tggtgGCGTCAGTTTGTTCGATTCTTCTATACTGGTAACACAACACCCACACCGGCCAACGCAGCCCCCCGTAAACTTATCACGACTCTATCGGCGGTCACTTCCTGCATCTGCTGCACGGCGAAAAGCCGTCGCAAAGc < 7:375577/137‑1 (MQ=255)
gcggaaCTTAGGTCGTTGATTCACTACAGGTACAATTACAGCCACAACGGCTAACGCAGCCTCCCGGAAACTGCTGACGACTCTATCGGCGGTCACTTCCTGCATCTGCTGCACGGCGAAAAGCCGTCGCAAAGCTgg < 6:147159/133‑1 (MQ=255)
ggTCACTTATTTCGATTCTTCTATACTGGTATCACTACAGCCAAAACGGCTAACGAATCCACCCGTAAAATGATGACGACTCTATCGGCGGTCACTTCCTGCATCTGCTGCACGGCGAAAAGCCGTCGCAAAGCTGGGaa < 3:299893/139‑1 (MQ=255)
atttAGTTCGATTCTTCTCTACTGGTATCACTACCGCCACACGGGCGAACGCATCCAGCCGGAAACTGATGACGACTCTATCGGCGGTCACTTCCTGCATCTGCTGCACGGCGAAAAGCCGTCGCAAAGCTGGGAAAAgg < 1:728007/138‑1 (MQ=255)
atttAGTTCGATTCTTCTCTACTGGTATCACTACAGCCACAACGGCGAACGCATCCACCCGGAAACTGATGACGACTCTATCGGCGGTCACTTCCTGCATCTGCTGCACGGCGAAAAGCCGTCGCAAAGCTGGGAAAAgg < 4:1001707/138‑1 (MQ=255)
aCTTTGTTCTTTTCTTCTCTACTGGTATAACTACAGCCCCAAGGGCGACCGCATCCACCCGCAAAGTGATCACGACTCTATCGGCGGTCACTTCCTGCATCTGCTGCACGGCGAAAAGCCGTCGCAAAGCTGGGAAAAgg < 8:46560/140‑1 (MQ=255)
aCTTTGTTCGTTTCTTCTCTACTGGAAGCACTACACCCACACCGGCTAACGCAGCCCGCGGGAACGTGAGGACGACTCTATCGGCGGTCACTTCCTGCATCTGCTGCACGGCGAAAAGCCGTCGCAAAGCTGGGAAAAgg < 3:307392/140‑1 (MQ=255)
aCTTAGTTCGATTCTTCTCTACTGGTATCACTACAGCCACAACGGCGAACGCATCCAGCCGGAAACTGATGACGACTCTATCGGCGGTCACTTCCTGCATCTGCTGCACGGCGAAAAGCCGTCGCAAAGCTGGGAAAAgg > 3:844287/1‑140 (MQ=255)
aCTTAGTGCGTTTCTTCTGTATTGGTTAAACTCAAGCCACACGGGCGAAGCCAGCCTGCCGTAATGTTTCGACGACTCTATCGGCGGTCACTTCCTGCATCTGCTGCACGGCGAAAAGCCGTCGCAAAGCTGGGaaaa < 5:107866/138‑1 (MQ=255)
tttgTTCGATTCTTCTCTACTGGTAGCAAACCAGCCACAACGGCTAACGAAACCCGCCGTAAACTGATGACGACTCTATCGGCGGTCACTTCCTGCATCTGCTGCACGGCGAAAAGCCGTCGCAAAGCTGGGAAAAGGCg < 1:25419/137‑1 (MQ=255)
tCGATTCTTCTCTACTGGTATCACTACAGCCACAACGGCGAACGCATCCAGCCGGAAACTGATGACGACTCTATCGGCGGTCACTTCCTGCATCTGCTGCACGGCGAAAAGCCGTCGCAAAGCTGGGAAAAGGCGATg > 5:876829/1‑138 (MQ=255)
attattATCTACAGGTATCACTACAGCCAAAACGGCGAACGCATCCAGCCGGAAACTGATGAAGACTCTATCTGCGGTAACTTCCTGCATCTGCTGCACGGCGAAAATCCGTCGCAAAGCTTGGAAAAGGCGATGCatat > 8:340000/1‑140 (MQ=255)
aTTCTTCTCTACTGGTATCACTACAGCCACAACGGCGAACGCATCCAGCCGGAAACTGATGACGACTCTATCGGCGGTCACTTCCTGCATCTGCTGCACGGCGAAAAGCCGTCGCAAAGCTGGGAAAAGGCGATGCat > 5:941764/1‑138 (MQ=255)
aTTCTTCTATACTGGTATCACTACACCCACAAGGCCGAACGCACCCCGCCGAAAACTGATGACGACTCTATCGGCGGTCACTTCCTGCATCTGCTGCACGGCGAAAAGCCGTCGCAAAGCTGGGAAAAGGCGATGCatat < 2:728293/140‑1 (MQ=255)
tcttctCTACTGGTATCACTACAGCCACAACGGCGAACGCATCCAGCCGGAAACTGATGACGACTCTATCGGCGGTCACTTCCTGCATCTGCTGCACGGCGAAAAGCCGTCGCAAAGCTGGGAAAAGGCGATGCatat > 5:771587/1‑138 (MQ=255)
tctcTACTGGTATCACTACAGCCACAACGGCGAACGCATCCACCCGTAAACTGATGACGACTCTATCGGCGGTCACTTCCTGCATCTGCTGCACGGCGAAAAGCCGTCGCAAAGCTGGGAAAAGGCGATGCATATCTCGc < 3:1018350/140‑1 (MQ=255)
tctcTACTGGTATCACAACAGCCACAAGGGCGAACGAATCCAGCCGTAAACTGTTGACGACTCTATCGGCGGTCACTTCCTGCATCTGCTGCACGGCGAAAAGCCGTCGCAAAGCTGGGAAAAGGCGATGCATATCTCGc < 7:181974/140‑1 (MQ=255)
tctaTACTGGTATCACTACAGCCACAACGGCGAACGCATCCAGCCGTAAACTGATGACGACTCTATCAGCGGTCACTTCCTGCATCTGCTGCACGGCGAAAAGCCGTCGCAAAGCTGGGAAAAGGCGATGCATAtctc < 6:244891/138‑1 (MQ=255)
tatctcgtGGTATCATTCCAGCCACATCGGCGACGCCAACCCGCCGTAACCTGATCACGACTCTATCGGCGGTCACTTCCTGCATCTGCTGCACGGCGAAAAGCCGTCGCAAAGCTGGGAAAAGGCGATGCATATCTCGc < 3:164168/133‑1 (MQ=255)
tttACTGGTTTAATAACCGCCACATGGGCGAACGAATACAGCCTTAATCTGTTGACGACTCTATCGGCGGTCACTTCCTGCATCTGCTGCACGGCGAAAAGCCGTCGCAAAGCTGGGAAAAGGCGATGCATATCTCGCTg < 2:131855/138‑1 (MQ=255)
cctccTGGAATCACTACACCCCCACCGGCGACCCCACCCAGCCGCAAACTGATCACGACTCTATCGGCGGTCACTTCCTGCATCTGCTGCACGGCGAAAAGCCGTCGCAAAGCTGGGAAAAGGCGATGCATATCTCGCTg < 2:407824/136‑1 (MQ=255)
tgttATCACTAAAGCCACAAAGCCTAACGCATCCAGCCGTAAACTGATGACGACTCTATCGGCGGTCACTTCCTGCATCTGCTGCACGGCGAAAAGCCGTCGCAAAGCTGGGAAAAGGCGATGCATAACTCGCTGGTGCt < 7:814549/137‑1 (MQ=255)
gTATCACTACAGCCACAACGGCGAACGCATCCAGCCGGAAACTGATGACGACTCTATCGGCGGTCACTTCCTGCATCTGCTGCACGGCGAAAAGCCGTCGCAAAGCTGGGAAAAGGCGATGCATATCTCGCTGGTGCTGt > 2:342578/1‑140 (MQ=255)
aTCACTACAGCCACAACGGCGAACGCATCCAGCCGGAAACTGATGACGACTCTATCGGCGGTCACTTCCTGCATCTGCTGCACGGCGAAAAGCCGTCGCAAAGCTGGGAAGAGGCGATGCATATCTCGCTGGTGCTGTAc > 3:372522/1‑140 (MQ=255)
aTCACTACAGCCACAACGGCGAACGCATCCAGCCGGAAACTGATGACGACTCTATCGGCGGTCACTTCCTGCATCTGCTGCACGGCGAAAAGCCGTCGCAAAGCTGGGAAAAGGCGATGCATATCTCGCTGGTGCTGt > 6:777592/1‑138 (MQ=255)
aTCACTACAGCCACAACGGCGAACGCATCCAGCCGGAAACTGATGACGACTCTATCGGCGGTCACTTCCTGCATCTGCTGCACGGCGAAAAGCCGTCGCAAAGCTGGGAAAAGGCGATGCATATCTCGCTGGTGCTGt > 5:411489/1‑138 (MQ=255)
aTCACTACAGCCACAACGGCGAACGCATCCAGCCGGAAACTGATGACGACTCTATCGGCGGTCACTTCCTGCATCTGCTGCACGGCGAAAAGCCGTCGCAAAGCTGGGAAAAGGCGATGCATATCTCGCTGGTGCTGTAc > 2:217436/1‑140 (MQ=255)
aTCACTACAGCCACAACGGCGAACGCATCCAGCCGGAAACTGATGACGACTCTATCGGCGGTCACTTCCTGCATCTGCTGCACGGCGAAAAGCCGTCGCAAAGCTGGGAAAAGGCGATGCATATCTCGCTGGTGCTGTAc > 7:865202/1‑140 (MQ=255)
aTCACTACAGCCACAACGGCGAACGCATCCAGCCGGAAACTGATGACGACTCTATCGGCGGTCACTTCCTGCATCTGCTGCACGGCGAAAAGCCGTCGCAAAGCTGGGAAAAGGCGATGCATATCTCGCTGGTGCTGTAc > 8:573026/1‑140 (MQ=255)
aTCACTACAGCCACAACGGCGAACGCATCCAGCCGGAAACTGATGACGACTCTATAGGCGGTAACTTCCTTCATCTGCTGCACTGCGAAACTCCGTCGCAAAGCTGGGAAAAGGCGATGCATATCTCGCTGGTGCTGTAc > 3:652755/1‑140 (MQ=255)
aCTACAGCCATAACGGCGAACGCATCCAGCCGGAAACTGATGACGACTCTATCGGCGGTCACTTCCTGCATCTGCTGCACGGCGAAATGCCGTCGCAAAGCTGGGAAACGGCGATGCATATCTCGCTGGTGCTGTACGcc > 7:793910/1‑140 (MQ=255)
aCTACAGCCACAACGGCGAACGCATCCAGCCGGAAACTGATGACGACTCTATCGGCGCTCACTTCCTGCATCTGCTGCACGGCGAAAAGCCGTCGCAAAGCTGGGAAAAGGCTATGCATATCTCGCTCGTGCTGTACGcc > 2:49828/1‑140 (MQ=255)
tACAGCCACAACGGCGAACGCATCCAGCCGGAAACTGATGACGACTCTATCGGCGGTCACTTCCTGCATCTGCTGCACGGCTAAAAGCCGTCGCAAAGCTGGGAAAAGCCGATGCATATCTCGCTGGAGCTGTACGCCGa > 4:892736/1‑140 (MQ=255)
tACAGCCACAACGGCGAACGCATCCAGCCGGAAACTGATGACGACTCTATCGGCGGTCACTTCCTGCATCTGCTGCACGGCGAAAAGCCGTCGCAATGCTGGGATAAGGCGATGCATATCTCGCTGGTGCTGTACGCCGa > 4:892743/1‑140 (MQ=255)
tACAGCCACAACGGCGAACGCATCCAGCCGGAAACTGATGACGACTCTATCGGCGGTCACTTCCTGCATCTGCTGCACGGCGAAAAGCCGTCGCAAAGCTGGGAAAAGGCGATGCATATCTCGCTGGTGCTGTACGCCGa > 1:1030655/1‑140 (MQ=255)
cAGCCACAACGGCGAACGCATCCAGCCGGAAACTGATGACGACTCTATCGGCGGTCACTTCCTGCATCTGCTGCACGGCGAAAAGCCGTCGCAAAGCTGGGACAAGGCGAGGCATATCTCGCTGGTGCTGTccgccgc > 5:925629/1‑137 (MQ=255)
cAGCCACAACGGCGAACGCATCCAGCCGGAAACTGATGACGACTCTATCGGCGGTCACTTCCTGCATCTGCTGCACGGCGAAAAGCCGTCGCAAAGCTGGGAAAAGGCGATGAATATCTCGCTGGTGCTGTAcgacga > 5:925624/1‑138 (MQ=255)
cAGCCACAACGGCAAACGCATCCAGCCGGAAACTGATGACGACTCTATCGGCGGTCACTTCCTGCATCTGCTGCACGGCGAAAAGCCGTCGCAAAGCTGGGAAAAGGCGATGCATATCTCGCTGGTGCTGTACGCCGa > 6:473278/1‑138 (MQ=255)
ccccACACCGGCGAACCCATCCACCCGGAAACTGATGACGACTCTATCGGCGGTCACTTCCTGCATCTGCTGCACGGCGAAAAGCCGTCGCAAAGCTGGGAAAAGGCGATGCATATCTCGCTGGTGCTGTACGCCGAaca < 4:771917/138‑1 (MQ=255)
aGCCACAACGGCGAACGCATCCAGCCGGAAACTGATGACGACTCTATCGGCGGTCACTTCCTGCATCTGCTGCACGGCGAAAAGCCGTCGCAAAGCTGGGAAAAGGCGATGCATAACTCGCTGGTGCTGTACGACGAaca > 4:61810/1‑140 (MQ=255)
gCCACAACGGCTAACGCAGCCACCCGGAAACTTATGACGACTCTATCGGCGGTCACTTCCTGCATCTGCTGCACGGCGAAAAGCCGTCGCAAAGCTGGGAAAAGGCGATGCATATCTCGCTGGTGCTGTACGCCGAacac < 8:5644/140‑1 (MQ=255)
cccACAACGGCTAACGCACCCACCCGGAAACTGAGGACGACTCTATCGGCGGTCACTTCCTGCATCTGCTGCACGGCGAAAAGCCGTCGCAAAGCTGGGAAAAGGCGATGCATATCTCGCTGGTGCTGTACGCCGAacac < 3:501919/139‑1 (MQ=255)
acaACGGCGAACGCATCCAGCCGGAAACTGATGACGACTCTATCGGCGGTCACTTCCTGCATCTGCTGCACGGCGAAAAGCCGTCGCAAAGCTGGGAAAAGGCGATGCATATCTCGCTGGTGCTGTACGCCGAACACGAg > 8:98280/1‑140 (MQ=255)
caACGGCGAACGCATCCAGCCGGAAACTGATGACGACTCTATCGGCGGTCACTTCCTGCATCTGCTGCACGGCGAAAAGCCGTCGCAAAGCTGGGAAAAGGCGATGCATATCTCGCTGGTGCTGTACGCCGACCACGAGt > 7:279724/1‑140 (MQ=255)
caACGGCGAACGCATCCAGCCGGAAACTGATGACGACTCTATCGGCGGACACTTCCTGCATCTGCTGCACGGCGAAAAGCCGTCGCAAAGCTGGGAAAAGGCGATGCATATCTCGCTGGTGCTGTACGCCGAACACGAGt > 1:606689/1‑140 (MQ=255)
aCGGCGAACGCATCCAGCCGGAAACTGATGACGACTCTATCGGCGGTCACTTCCTGCATCTGCTGCACGGCGAAAAGCCGTCg < 5:285544/83‑1 (MQ=255)
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ATGCGCACCGGCGTTTCCGCGCTCGGCTGCACGCTGCCAGAAAAAGAGGGGCACACCGTTTCTGGTGCGCGGGATATTGCCGACAAACTGCTGGCGTCACTTAGTTCGATTCTTCTCTACTGGTATCACTACAGCCACAACGGCGAACGCATCCAGCCGGAAACTGATGACGACTCTATCGGCGGTCACTTCCTGCATCTGCTGCACGGCGAAAAGCCGTCGCAAAGCTGGGAAAAGGCGATGCATATCTCGCTGGTGCTGTACGCCGAACACGAGTTT > NZ_CP022686/3925150‑3925428
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| Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
N/A
