Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A6 F13 I0 R1
|
235 |
6960.4 |
9135780 |
98.4% |
8989607 |
135.7 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
freq |
annotation |
gene |
description |
| RA |
NZ_CP022686 |
3,925,289 |
A→C |
13.4% |
N156T (AAC→ACC) |
prpC → |
2‑methylcitrate synthase |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NZ_CP022686 | 3,925,289 | 0 | A | C | 13.4%
| 312.0
/ 7.5
| 172 | N156T (AAC→ACC) | prpC | 2‑methylcitrate synthase |
| Reads supporting (aligned to +/- strand): ref base A (105/38); new base C (2/26); total (107/65) |
| Fisher's exact test for biased strand distribution p-value = 3.32e-11 |
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 |
Only 100 of 178 total aligned reads displayed.
ATGCGCACCGGCGTTTCCGCGCTCGGCTGCACGCTGCCAGAAAAAGAGGGGCACACCGTTTCTGGTGCGCGGGATATTGCCGACAAACTGCTGGCGTCACTTAGTTCGATTCTTCTCTACTGGTATCACTACAGCCACAACGGCGAACGCATCCAGCCGGAAACTGATGACGACTCTATCGGCGGTCACTTCCTGCATCTGCTGCACGGCGAAAAGCCGTCGCAAAGCTGGGAAAAGGCGATGCATATCTCGCTGGTGCTGTACGCCGAACACGAGT > NZ_CP022686/3925150‑3925426
|
aTGCGCACCGGCGTTTCCGCGCTCGGCTGCACGCTGCCAGAAAAAGAGGGGCACACCGTTTCTGGTGCGCGGGATATTGCCGACAAACTGCTGGCGTCACTTAGTTCGATTCTTCTCTACTGGTATCACTACAGCCACaa > 5:295130/1‑140 (MQ=255)
aTGCGCACCGGCGTATCCGCGCTCGGCTGCACGCTGCCAGATAAAGAGGGGCACACCGTTTCTGGTGCGCGGGTTATTGCCGACAAACTGCTGGCGTCAGTTAGTTCGATTCTTCTCTACTGGTATCACTACAGCCACaa > 7:721268/1‑140 (MQ=255)
aCCGGCGTTTCCGCGCTCGGCTGCACGCTGCCAGAAAAAGAGGGGCACACCGTTTCTGGTGCGCGGGATATTGCCGACAAACTGCTGGCGTCACTTAGTTCGATTCTTCTCTACTGGTATCACTACAGCCACAACGGCGa > 1:765846/1‑140 (MQ=255)
aCCGGCGTTTCCGCGCTCGGCTGCACGCTGCCAGAAAAAGAGGGGCACACAGTTTCTGGTGCGCGGGATATTGCCGACAAACTGCTGGCGTCACTTAGTTCGATTCTTCTCTACTGGTATCACTACAGCCACAACGGCGa > 5:870565/1‑140 (MQ=255)
ccGGCGTTTCCGCGCTCGGCTGCACGCTGCCAGAAAAAGAGGGGCACACCGTTTCTGGTGCGCGGGATATTGCCGACAAACTGCTGGCGTCACTTAGTTCGATTCTTCTCTACTGGTATCACTACAGCCACAACGGCg > 3:785024/1‑138 (MQ=255)
ccGGCGTTTCCGCGCTCGGCTGCACGCTGCCAGAAAAAGAGGGGCACACCGTTTCTGGTGCGCGGGATATTGCCGACAAACTGCTGGCGTCACTTAGTTCGATTCTTCTCTACTGGTATCACTACAGCCACAACGGCGaa < 8:430647/140‑1 (MQ=255)
cGGCGTTTCCGCGCTCGGCTGCACGCTGCCAGAAAAAGAGGGGGACACCGTTTCTGGTGCGCGGGATATTGCCGACAAACTGCTGGCGTCACTTAGTTCGATTCTTCTCTACTGGTATCACTACAGCCACAACGGCGAAc > 7:174036/1‑140 (MQ=255)
cGGCGTTTCCGCGCTCGGCTGCACGCTGCCAGAAAAAGAGGGGCACACCGTTTCTGGTGCGCGGGATATTGCCGACAAACTGCTGGCGTCACTTAGTTCGATTCTTCTCTACTGGTATCACTACAGCCACACCGGCgc > 3:864334/1‑137 (MQ=255)
cGGCGTTTCCGCGCTCGGCTGCACGCTGCCAGAAAAAGAGGGGCACACCGTTTCTGGTGCGCGGGATATTGCCGACAAACTGCTGGCGTCACTTAGTTCGATTCTTCTCTACTGGTATCACTACAGCCACAACGGCGAAc > 1:506604/1‑140 (MQ=255)
cGGCGTTTCCGCGCTCGGCTGCACGCTGCCAGAAAAAGAGGGGCACACCGGTTCGGGGTCGCGGGATATTGCCGACAACCTGCTGGCGTCCCGTACTTCGAGTCTTCTCGTCAGGTATCACTACACCCACAACCGCGAAc > 7:645505/1‑140 (MQ=255)
gCGTTTCCGCGCTCGGCTGCACGCTGCCAGAAAAAGAGGGGCACACCGTTTCTGGTGCGCGGGATATTGCCGACAAACTGCTGGCGTCACTTAGTTCGATTCTTCTCTACTGGTATCACTACAGCCACAACGGCGAACGc > 2:594960/1‑140 (MQ=255)
cGTTTCCGCGCTCGGCTGCACGCTGCCAGAAAAAGAGGGGCACACCGTTTCTGGTGCGCGGGATATTGCCGACAAACTGCTGGCGTCACTTAGTTCGATTCTTCTCTACTGGTATCACTACAGCCACAACGGCGAACg > 3:776998/1‑138 (MQ=255)
cTCGGCTGCACGCTGCCAGAAAAAGAGGGGCACACCGTTTCTGGTGCGCGGGATATTGCCGACAAACTGCTGGCGTCACTTAGTTCGATTCTTCTCTACTGGTATCACTACAGCCACAACGGCGAACGCATCCAGCCGGa > 1:1081976/1‑140 (MQ=255)
cTCGGCTGCACGCTGCCAGAAAAAGAGGGGCACACCGTTTCTGGTGCGCGGGATATTGCCGACAAACTGCTGGCGTCACTTAGTTCGATGCTTCTCTACTGGTATCACTACAGCCACAACGGCGAACGCATCCAGCCGGa < 5:424305/140‑1 (MQ=255)
cGGCTGCACGCTGCCAGAAAAAGAGGGGCACACCGTTTCTGGTGCGCGGGATATTGCCGACAAACTGCTGGCGTCACTTAGTTCGATTCTTCTCTACTGGTATCACTACAGCCACAACGGCGAACGCATCCAGCCGGaaa < 6:14224/140‑1 (MQ=255)
cGGCTGCACGCTGCCAGAAAAAGAGGGGCACACCGTTTCTGGTGCGCGGGATATTGCCGACAAACTGCTGGCGTCACTTAGTTCGATTCTTCTCTACTGGTATCACTACAGCCACAACGGCGAACGCATCCAGCCGGa < 4:874974/138‑1 (MQ=255)
ggCTGCACGCTGCCAGAAAAAGAGGGGCACACCGTTTCTGGTGCGCGGGATATTGCCGACAAACTGCTGGTGTCACTTAGTTCGATTCTTCTCTACTGGTATCACTACAGCCACAACGGCGAACGCATCCAGCCGGAAAc > 2:612849/1‑140 (MQ=255)
gcggCACGCTGCCAGAAAATGAGGGGCACACCGTTTCTGGTGCGCGGGATATTGCCGACAAACTGCTGGCGTCACTTAGTTCGATGCTTCTCTACTGGTATCACTACAGCCACACCGGCGAACGCATCCAGCCGGaaa < 3:595009/135‑1 (MQ=255)
gCACGCTGCAATAAAAAGAGGGGCACACGGTTTCTGGTGCGCGGTATATTGCCGACAAACTGCTGGCGTCACTTTGTTCTATTCTTCTCTACTGGTATCACTACAGCCACAACGGCTAACGCATCCAGCCGTAAACttat < 2:809653/140‑1 (MQ=255)
cACGCTGCCAGAAAAAGAGGGGCACACCGTTTCTGGTGCGCGGGATATTGCCGACAAACTGCTGGCGTCACTTAGTTCGATTCTTCTCTACTGGTATCACTACAGCCACAACGGCGCACGCATCCAGCCGGAAACtgatg > 2:958401/1‑140 (MQ=255)
ggtgcccATAAAAATAGGGGCACACCGTTTCTGGTGCGGGGGATATTCCCGAATATTTGCTGGCTTCACTTAGTTCGATTCTTCTATCCTGGTATAAATCCAGCCAAAACGGCGAACGCTTCCACCCTTAAAATTATgac < 6:422208/135‑1 (MQ=255)
tGCCATAAAAAGAGGGGCACACCGTTTCTGGGGCGGGGGATATGGCCGAAAACCTGCTGGCGTCAATTAGTTCGATTCTTCTCTACTGTTATCAATACAGCCACAACGGCTAACGCATCACGCCGTAAACTGATgacgac < 8:27559/140‑1 (MQ=255)
tGCCAGAAAAAGAGGGGCACACCGTTTCTGGTGCGCGGGATATTGCCGACAAACTGCTGGCGTCACTTAGTTCTATTCTTCTCTACTGGTATCACTACAGCCACACCGGCGAACGCATCCCGCCGGAAACTGATgacgac > 5:893941/1‑140 (MQ=255)
ccaataaaatGGGGGGCAAACCGTTGCGGGGGCGCGGGATATTGACGAAAAACTGGTGGCGTCACTTAGTTCGATTATACTCTACTGTTATAACTAAACCAACACCGGCGAACGCATCCAGCCGTAAACTGATGACGAct < 8:520691/135‑1 (MQ=255)
ccAGAAAAAGAGGGGCACACCGTTTCTGGTGCGCGGGATATTGCCGACAAACTGCTGGCGTCTCTTAGTGCGATTCTTCTCTTCTGGTCTCACTACAGCCACAACGGCTCACGCATCCAGCCGTAAACTGATGCCGActc > 7:722556/1‑140 (MQ=255)
gAAAAAGAGGGGCACACCGTTTCTGGTGCGCGGGATATTGCCGACAAACTGCTGGCGTCACTTAGTTCGATTCTTCTCTACTGGTATCACTACAGCCACAACGGCGCACGCATCCAGCCGGAAACTGATGAAGACTCTAt > 2:71261/1‑140 (MQ=255)
gCACACCGTTTCTGGTGCGCGGGATATTGCCGACAAACTGCTGGCGTCACTTAGTTCGATTCTTCTCTACTGGTATCACTACAGCCACAACGGCGAACGCATCCAGCCGGAAACTGATGACGACTCTATCGGCGGTCACt > 2:73570/1‑140 (MQ=255)
cacaCCGTTTCTGGTGCGCGGGATATTGCCGACAAACTGCTGGCGTCACTTAGTTCGATTCTTCTCTACTGGTATCACTACAGCCACAACGGCGAACGCATCCAGACGGAAACTGATGACGACTCTATCGGCGGTCACtt > 8:911461/1‑140 (MQ=255)
cacCGTTTCTGGTGCGCGGGATATTGCCGACAAACTGCTGGCGTCACTTAGTTCGATTCTTCTCTACTGGTATCACTACAGCCACAACGGCGAACGCATCCAGCCGGAAACTGATGACGACTCTATCGGCGGTCACTTcc > 6:930231/1‑140 (MQ=255)
cacCGTTTCTGGGGCGCGGTATATTGCCGACAAACTGGTGGCGTCACTTAGTTCTATTCTTCTCTACTGGTATCACTACAGCCACAACGGCTAACGCATCCCGCCGTAAACTGATGACGACTCTATCGGCGGTCACTTcc < 8:23615/140‑1 (MQ=255)
acCGTTTCTGGTGCGCGGGATATTGCCGACAAACTGCTGGCGTCACTTAGTTCGATTCTTCTCTACTGGTATCACTACAGCCACAACGGCGAACGCATCCAGCCGGAAACTGATGACGACTCTATCGGCGGTCACTTCCt > 6:609176/1‑140 (MQ=255)
cTGGTGCGCTGGATATTGCCGACAAACTGCTGGCGTCACTTAGGTCGATTCTTCGCTTCTGGTATCACTACAGCCACAACTGCGAACGCATCCAGCCGGCAACTGAAGACGACTCTATCGGCGGTCACTCGCTGCATctg > 8:641632/1‑140 (MQ=255)
gTGCGCGGGATATTGCCGACAAACTGCTGGCGTCACTTAGTTCGATTCTTCTCTACTGGTATCACTACAGCCACAACGGCGAACGCATCCAGCCGGAAACTGATGCCGACTCTATCGGCGGTCACTTCCTGCATctgctg > 2:1105201/1‑140 (MQ=255)
gTGCGCGGGATATTGCCGACAAACTGCTGGCGTCACTTAGTTCGATTCTTCTCTACTGGTATCACTACAGCCACAACGGCGAACGCATCCAGCCGGAAACTGATGACGACTCTATCGGCGGTCACTTCCTGCATctgctg > 2:1105205/1‑140 (MQ=255)
gTGCGCGGGATATTGCCGAAAAAATGCTGGCGTCACTTAGTTCGATTCTTCTCTACTTGTATCACTACAGCCACAAAGGCGAACGCATACAGCCGGAAACTGATGACGACTCTATCGGCGTTCACTTCCTTCATctgctg > 7:212593/1‑140 (MQ=255)
tcgcgGGATATTGCCGACAAACTGCTGGCGTCACTTAGTTCGATTCTTCTCTACTGGTATCACTACAGCCACAACTGCGAACGCATCCAGCCGGAAACTGATTACGACTCTATCGGCTGTCACTTACTGCATCTGCTTCa > 5:634403/2‑140 (MQ=255)
gcgcGGTATATTGCCGAAAAACTGCTGGCTTACCTTAGTTCTATTCTACTCTACTGTAATCACAACAGCCCCAACGGCCACCGCAACCAGCCGTAAACTGATGACGACTCTATCGGCGGTCACTTCCTGCATCTGCTGCa < 8:173781/140‑1 (MQ=255)
gcgcGGGATATTGCCGACAACCTGCTGGCGTCACTTAGTTCTATTCTTCTCTACTGGTATCACAACACCCACACCGGCTAACCCATCCAGCCGGAAACTGAGCACGACTCTATCGGCGGTCACTTCCTGCATCTGCTGCa < 1:637004/140‑1 (MQ=255)
gcgcGGGATATTGCCGACAAACTGCTGGCGTCACTTAGTTCGATTCTTCTCTACTGGTATCCCTACAGCCACAACGGCGAACGAATCCAGCCGGAAACTGATGCAGCCTCTATCGGCGGTCACTTCCTGCATcttctg > 3:90126/1‑138 (MQ=255)
gcgcGGGATATTGCCGACAAACTGCTGGCGTCACTTAGTTCGATTCTTCTCTACTGGTATCACTACAGCCACAACGGCGAACGCATCCAGCCGGAAACTGATGACGACTCTATCGGCGGTCACTTCCTGCATctgctg > 4:1045786/1‑138 (MQ=255)
gcgcGGGATATTGCCGACAAACTGCTGGCGTCACTTAGTTCGATTCTTCTCTACTGGTATCACTACAGCCACAACGGCGAACGCATCCAGCCGGAAACTGATGACGACTCTATCGGCGGTCACTTCCTGCATCTgcagca > 1:778451/1‑140 (MQ=255)
gcgcGGGATATTGCCGACAAACTGCTGGCGTCACTTAGTTCGATTCTTCTCTACTGGTATCACTACAGCCACAACGGCGAACGCATCCAGCCGGAAACTGATGACGACTCTATCGGCGGTCACTTCATGCATctgctg > 4:708944/1‑138 (MQ=255)
cgGGATATTGCCGACAAACTGCTGGCGTCACTTAGTTCGATTCTTCTCTACTGGTATCACTACAGCCACAACGGCGAACGCATCCAGCCGGAAACTGATGACGCCTCTATCGGCGGTCACTTCCTGCATCTGCTGCACgg > 1:721561/1‑140 (MQ=255)
aCAAACTGCTGGCGTCACTTAGTTCGATTCTTCTCTACTGGTATCACTACAGCCACAACGGCGACCGCATCCAGCCGGAAACTGATGACGCCTCTATCGGCGGTCACTTCCTGCATCTGCTGCAAGGCGAAAAGCCGTCg > 6:664935/1‑140 (MQ=255)
aCAAACTGCTGGCGTCACTTAGTTCGATTCTTCTCTACTGGTATCACTACAGCCACAACGGCGAACGCATCCCGCCGGAAACTGATGACGACTCTATCGGCGGTCACTTCCTGCATCTGCTGCACGGCGAAAAGCCGTCg > 7:1011719/1‑140 (MQ=255)
aCAAACTGCTGGCGTCACTTAGTTCGATTCTTCTCTACTGGTATCACTACAGCCACAACGGCGAACGCATCCAGCCGGAAACTGATGACGACTCTATCGGCGGTCACTTCCTGCATCTGCTGCACGGCGAAAAGCCGTCg > 5:309845/1‑140 (MQ=255)
aaaCTGCTGGCGTCACTTATTTCGATTCTTCTCTACTGGTATCACAACCCCCACACCGGCGAACGCATCCCGCCGGAAACTGATGACGACTCTATCGGCGGTCACTTCCTGCATCTGCTGCACGGCGAAAAGCCGTCGCa < 5:603350/140‑1 (MQ=255)
ctgcggGCTTCACTTAGTGCGTTCCTTCTCTCCTGGTAACACAACCGCCACACCGCCCACCGCAACCCGCCGCAAACTTAGCACGACTCTATCGGCGGTCACTTCCTGCATCTGCTGCACGGCGAAAAGCCGTCGCAAAg < 5:246503/140‑1 (MQ=255)
tgcggGGGTCACTTAGTTCGATTCTTCTCTCCTGGTATCACTACAGCCACCACGGCGAACGCATCCAGCCGGAAACTGAGCACGACTCTATCGGCGGGCACTTCCTGCATCTGCTGCACGGCGAAAAGCCGTCGCAAAGc < 8:643814/140‑1 (MQ=255)
cGTCACTTTGTTCGATTTTTCTCTACTGGTACCAAACCAGCCACAACGGCGAACGCATCCCGCCGGAAACTGATGACGACTCTATCGGCGGTCACTTCCTGCATCTGCTGCACGGCGAAAAGCCGTCGCAAAGCTggg < 4:6690/138‑1 (MQ=255)
gccACTTAGTTCGATTCTTCTCACCTGGTATCACTCCACCCACACCGGCGAACGCAACCCCCCGTAAACTGATGACGACTCTATCGGCGGTCACTTCCTGCATCTGCTGCACGGCGAAAAGCCGTCGCAAAGCTGGGa < 4:432909/136‑1 (MQ=255)
gTCTCTTAGGTCGATTCTTCCCTACTGTTAGCCCTACCGCCACACCGGCTAACGCATCCCGCCGTAAACTCATCACGACTCTATCGGCGGTCACTTCCTGCATCTGCTGCACGGCGAAAAGCCGTCGCAAAGCTGGGaaa < 1:225743/140‑1 (MQ=255)
cACTTAGTTCGATTCTTCTCTACTGGTAACACTACAGCCACAACGGCTAACGCATCCAGCCGGAAACTGCTGCCGACTCTATCGGCGGTCACTTCCTGCATCTGCTGCACGGCGCGAAGCCGTCGCCACGCGGGGAAAAg > 5:1123026/1‑140 (MQ=255)
atataaGTTGGATTCTTCTCTAGTGTTTACAATACTGCAACATCGGCTAACGCATCCAGCCGTAAACTGATCACGACTCTATCGGCGGTCACTTCCTGCATCTGCTGCACGGCGAAAAGCCGTCGCAAAGCTGGGAAAAg < 6:111616/135‑1 (MQ=255)
aCTTATTTCTATTCTTCTCTCCTGGTATCAATCCCCCCACAACGGCTAACGCAACCAGCCGTAAACTTATGACGACTCTATCGGCGGTCACTTCCTGCATCTGCTGCACGGCGAAAAGCCGTCGCAAAGCTGGGAAAAgg < 1:58037/140‑1 (MQ=255)
aCTTAGTTCGATTCTTCTCTACTGGTATCACTACAGCCACAACGGCGAACGCATCCAGCCGTAAACTGATGACGACTCTATCGGCGGTCACTTCCTGCATCTGCTGCACGGCGAAAAGCCGTCGCAAAGCTGGGaaaa < 4:785024/138‑1 (MQ=255)
aCTTAGTTCGATTCTTCTCTACTGGTATCACTACAGCCACAACGGCGAACGAATCCAGCCGGAAACTTATGACGACTCTATCGGCGGTCACTTCCTGCATCTGCTGCACGGCGAAAAGCCGTCGCAAAGCTGGGaaaa < 4:677627/138‑1 (MQ=255)
aGTTCTATTCTTCTCTACGGGTATCACTACCGCCCCAACGGCGAACGCACCCCGCCGGAAACTGATGACGACTCTATCGGCGGTCACTTCCTGCATCTGCTGCACGGCGAAAAGCCGTCGCAAAGCTGGGAAAAGGCg < 3:170814/138‑1 (MQ=255)
gagcGATTCTTCTCTACTGGTATCACACCACCCACAACGGCGACCGAATCCAGCCGGAACCTGATGACGACTCTATCGGCGGGCACTTCCTGCATCTCCTGCACGGCGAAAAGCCGTCGCAAAGCTGGGAAAAGGCGATg < 6:864968/137‑1 (MQ=255)
ttCGATTCTTCTCTACTGGTATCACTACAGCCACAACGGCGAACGCATCCAGCCGGAAACTGATGACGACTCTATCGGCGGTCACTTCCTGCATCTGCTGCACGGCGAAAAGCCGTCGCAAAGCTGGGAAAAGGCGATGc > 6:208270/1‑140 (MQ=255)
aTTCTTCTCTAGTGGTACCACTACCGCCACACCGGCTAAGGCACCCAGCCGCAAACTGATGACGACTCTATCGGCGGTCACTTCCTGCATCTGCTGCACGGCGAAAAGCCGTCGCAAAGCTGGGAAAAGGCGATGCat < 3:533751/138‑1 (MQ=255)
aTTCTTCTCTACTGGTATCACTACAGCCACAACGGCGAACGCATCCAGCCGGAAACTGATGACGACTCTATCGGCGGTCACTTCCTGCATCTGCTGCACGGCGAAAAGCCGTCGCAAAGCTGGGAAAAGGCGATGCatat > 6:347677/1‑140 (MQ=255)
aTTCTTCTCTACTGGTATCACTACACCCCAAACGGCTAACGCATCCACCCGGAAACTTATGACGACTCTATCGGCGGTCACTTCCTGCATCTGCTGCACGGCGAAAAGCCGTCGCAAAGCTGGGAAAAGGCGATGCat < 4:516432/138‑1 (MQ=255)
aTTCTTCTCTACTGGTATCACAACACCCACACCGGCTAACGCATCCCGCCGCAAACGTACGACGACTCTATCGGCGGTCACTTCCTGCATCTGCTGCACGGCGAAAAGCCGTCGCAAAGCTGGGAAAAGGCGATGCatat < 2:180823/140‑1 (MQ=255)
aTTCTTCTCTACGGGTATCACTACAGCCACAACGGCTACCGCAGCCAGCCGGAAAGTGATGACGACTCTATCGGCGGTCACTTCCTGCATCTGCTGCACGGCGAAAAGCCGTCGCAAAGCTGGGAAAAGGCGATGCat < 4:1070577/138‑1 (MQ=255)
aTTCTTATATCCTGTTATCAATAAACCCACAACGGAGAACCCACCCCCGCCTAACCTGAGCACGACTCTATCGGCGGTCACTTCCTGCATCTGCTGCACGGCGAAAAGCCGTCGCAAAGCTGGGAAAAGGCGATGCatat < 1:1081633/140‑1 (MQ=255)
tcttctCTACTGGTATCAATACACCCACACCGGCGAACGCATCCAGCCGTAAACTGATCACGACTCTATCGGCGGTCACTTCCTGCATCTGCTGCACGGCGAAAAGCCGTCGCAAAGCTGGGAAAAGGCGATGCatat < 3:1142835/138‑1 (MQ=255)
tctcaccTGGTATCACTACCGCCACACCGGCGAACGAATCCCCCCGCAAACTGATCACGACTCTATCGGCGGTCACTTCCTGCATCTGCTGCACGGCGAAAAGCCGTCGCAAAGCTGGGAAAAGGCGATGCATATCTCGc < 6:295130/134‑1 (MQ=255)
tctcTACTGGTATCACAACAGCCACACCGGCTACCGAATCCAGCCGGAAACTGAGGACGACTCTATCGGCGGTCACTTCCTGCATCTGCTGCACGGCGAAAAGCCGTCGCAAAGCTGGGAAAAGGCGATGCATATCTCGc < 2:854226/140‑1 (MQ=255)
tcgatACTGTAATCACTACACCCACACCGCCGAACGCATCCAGCCGCAAACTGATCACGACTCTATCGGCGGTCACTTCCTGCATCTGCTGCACGGCGAAAAGCCGGCGCAAAGCTGGGAAAAGGCGATGCATATCTCGc < 2:353806/136‑1 (MQ=255)
ctctACTGGTATCACTACAGCCACAACGGCGAACGCATCCAGCCGGAAACTGATGACGACTCTATCGGCGGTCACTTCCTGCATCTGCTGCACGGCGAAAAGCCGTCGCAAAGCTGGGAAAAGGCGATGCATATCTCGcg > 1:84675/1‑139 (MQ=255)
tctACTGGTATCACTACAGCCACACCGGCGAACGCATCCCGCCGTAAACTGATGACGACTCTATCGGCGGTCACTTCCTGCATCTGCTGCACGGCGAAAAGCCGTCGCAAAGCTGGGAAAAGGCGATGCATATCTCGCTg < 8:405101/140‑1 (MQ=255)
aCTGGAAGCACTACTGCCACAAGGGCGAACGCAGCCCGCGGTAAAGTGCGCACGACTGTATCGGCGGTCACTTCCTGCATCTGCTGCACGGCGAAAAGCCGTCGCAAAGCTGGGAAAAGGCGATGCATATCTCGCTgg < 4:972035/138‑1 (MQ=255)
cTGGTATCACTACAGCCACAACGGCGAACGCATCCAGCCGGAAACTGATGACGACTCTATCGGCGGTCACTTCCTGCATCTGCTGCACGGCGAAAAGCCGTCGCAAAGCTGGGAAAAGGCGATGCATATCTCGCTGGt > 3:383768/1‑138 (MQ=255)
cTGGTATCACTACAGCCACAACGGCGAACGCATCCAGCCGGAAACTGATGACGACTCTATCGGCGGTCACTTCCTGCATCTGCTGCACGGCGAAAAGCCGTCGCAAAGCTGGGAAAAGGCGATGCATATCTCGCTGGTGc > 1:41801/1‑140 (MQ=255)
gTATCACTACCCCCACAACGGCGAACGCATCCAGCCGGAAACTGCGGACGACTCTATCGGCGGTCACTTCCTGCATCTGCTGCACGGCGAAAAGCCGTCGCAAAGCTGGGAAAAGGCGATGCATATCTCGCTGGTGCTGt < 8:686508/140‑1 (MQ=255)
gTATCACTACAGCCACAACGGCGAACGCATCCAGCCGGAAACTGATGACGACTCTATCGGCGGTCACTTCCTGCATCTGCTGCACGGCGAACAGCCGTCGCAAAGCTGGGAAAAGGCGATGCATATCTCGCTGGTGCTGt > 6:548845/1‑140 (MQ=255)
gTATCACTACAGCCACAACGGCGAACGCATCCAGCCGGAAACTGATGACGACTCTATCGGCGGTCACTTCCTGCATCTGCTGCACGGCGAAAAGCCGTCGCAAAGCTGGGAAAAGGCGATGCATATCTCGCTGGTGCTGt > 7:405101/1‑140 (MQ=255)
gTATCACTACAGCCACAACGGCGAACGCATCCAGCCGGAAACTGATGACGACTCTATCGGCGGTCACTTCCTGCATCTGCTGCACGGCGAAAAGCCGTCGCAAAGCTGGGAAAAGGCGATGCATATCTCGCTGGTGCTGt > 6:875587/1‑140 (MQ=255)
gTATCACTACAGCCACAACGGCGAAAGCATCCAGCCGGAAACTGATGACGACTCTATCGGCGGTCACTTCCTGCATCTGCTGCACGGCGAAAAGCCGTCGCAAAGCTGGGAAAAGGCGATGCATATCTCGCTGGTGCTGt > 6:705033/1‑140 (MQ=255)
aaTCACTACAGCCACAACGGCGAACGCATCCCGCCGTAAACTTATCACGACTCTATCGGCGGTCACTTCCTGCATCTGCTGCACGGCGAAAAGCCGTCGCAAAGCTGGGAAAAGGCGATGCATATCTCGCTGGTGCTGTa < 2:436650/139‑1 (MQ=255)
aTCACTACAGCCACAACGGCGAACGCATCCAGCCGGAAACTGATGACGACTCTATCGGCGGTCACTTCCTGCATCTGCTGCACGGCGAAAAGCCGTCGCAAAGCTGGGAAAAGGCGATGCATATCTCGCTGGTGCTGt > 4:965908/1‑138 (MQ=255)
aTCACTACAGCCACAACGGCGAACGCATCCAGCCGGAAACTGATGACGACTCTATCGGCCGTCACTTCCTGCATCTCCTGCACGGCGACAATCCGTCGCAAAGCTGGGAAAAGTCGATGCATATCTCGCTGGTGCTGt > 3:11574/1‑138 (MQ=255)
aTCACTACAGCAACAACGGCGAACGCATCCATCCGGAAACTGATGACGACTCTATCGGCGGTCACTGCCTGCATATGCTGCACGGCGAAAAGCCGTCGAAAAGCTGGGAAAAGGCGCTGCATATCTCGCTGGTGCTGt > 4:38881/1‑138 (MQ=255)
taacaaCAGCCACACGGGCTAACGCATCCACCCTGAAACTTATGACGACTCTATCGGCGGTCACTTCCTGCATCTGCTGCACGGCGAAAAGCCGTCGCAAAGCTGGGAAAAGGCGATGCATATCTCGCTGGTGCTGTACg < 5:518164/135‑1 (MQ=255)
acACTACCCCCACAACGGCGAACGCTCCCAGCGGGAAACTGAGGACGACTCTATCGGCGGTCACTTCCTGCATCTGCTGCACGGCGAAAAGCCGTCGCAAAGCTGGGAAAAGGCGATGCATATCTCGCTGGTGCTGTACg < 2:561596/139‑1 (MQ=255)
aCTACAGCCACAACGGCGAACGCATCCAGCCGGAAACTGATGACGACTCTATCGGCGGTCACTTCCTGCATCTGCTGCACGGCGAAAAGCCGTCGCAAAGCTGGGAAAAGGCGATGCATATCTCGCTGGTGCTGTACGcc > 6:477356/1‑140 (MQ=255)
aCTACAGCCACAACGGCGAACGCATCCAGCCGGAAACTGATGACGACTCTATCGGCGGTCACTTCCTGCATCTGCTGCACGGCGAAAAGCCGTCGCAAAGCTGGGAAAAGGCGATGCATATCTCGCTGGTGCTGTACGcc > 5:516691/1‑140 (MQ=255)
tACAGCCACAACGGCGAACGCATCCAGCCGGAAACTGATGCCGACTCTATCGGCGGTCACTTCCTGCATCTGCTGCACGGCGAAAAGCCGTCGCAAAGCTGGGAAAAGGCGATGCATATCTCGCTGGTGCTGTACGCAGa > 5:367201/1‑140 (MQ=255)
cgCCACAACGGCGAACGAATCCAGCCGGAAACTGATGACGACTCTATCGGCGGTCACTTCCTGCATCTGCTGCACGGCGAAAAGCCGTCGCAAAGCTGGGAAAAGGCGATGCATATCTCGCTGGTGCTGTACGCCGAaca < 2:1047755/139‑1 (MQ=255)
aGCCACAACGGCGAACGCATCCAGCCGGAAACTGATGACGACTCTATCGGCGGTCACTTCCTGCATCTGCTGCACGGCGAAAAGCCGTCGCAAAGCTGGGAAAAGGCGATGCATATCTCGCTGGTGCTGTACGCCGAacc > 2:643489/1‑139 (MQ=255)
aGCCACAACGGCGAACGCATCCAGCCGGAAACTGATGACGACTCTATCGGCGGTCACTTCCTGCATCTGCTGCACGGCGAAAAGCCGTCGCAAAGCTGGGAAAAGGCGATGCATATCTCGCTGGTGCTGTACGCCGAaca > 7:1031128/1‑140 (MQ=255)
gCCACACCGGCGAACGCATCCACCCGGAAACTGATGACGACTCTATCGGCGGTCACTTCCTGCATCTGCTGCACGGCGAAAAGCCGTCGCAAAGCTGGGAAAAGGCGATGCATATCTCGCTGGTGCTGTACGCCGAacac < 8:94032/140‑1 (MQ=255)
cccACAACGGCTAACGCATCCCGCCGCAAACTGATGACGACTCTATCGGCGGTCACTTCCTGCATCTGCTGCACGGCGAAAAGCCGTCGCAAAGCTGGGAAAAGGCGATGCATATCTCGCTGGTGCTGTACGCCGAacac < 1:33677/139‑1 (MQ=255)
cccACAACGGCTAACGCATCCCGCCGCAAACTGATGACGACTCTATCGGCGGTCACTTCCTGCATCTGCTGCACGGCGAAAAGCCGTCGCAAAGCTGGGAAAAGGCGATGCATATCTCGCTGGTGCTGTACGCCGAacac < 7:418813/139‑1 (MQ=255)
ccACAACGGCGAACGCATCCAGCCGGAAACTGATGACGACTCTATCGGCGGTCACTTCCTGCATCTGCTGCACGGCGAAAAGCCGTCGCAAAGCTGGGAAAAGGCGATGCATATCTCGCTGGTGCTGTACGCCGAaca > 3:138382/1‑138 (MQ=255)
ccACAACGGCGAACGCATCCAGCCGGAAACTGATGACGACTCTATCGGCGGTCACTTCCTGCATCTGCTGCACGGCGAAAAGCCGTCGCAAAGCTGGGAAAAGGCGATGCATATCTCGCTGGTGCTGTACGCCGAACACg > 5:1091390/1‑140 (MQ=255)
acaACGGCGAACGCATCCAGCCGGAAACTGATGACGACTCTATCGGCGGTCACTTCCTGCATCTGCTGCACGGCGAAAAGCCGTCGCAAAGCTGGGAAAAGGCGATGCATATCTCGCTGGTGCTGTCCGCCGAacacc > 3:652339/1‑137 (MQ=255)
caACGGCGAACGCATCCAGCCGGAAACTGATGACGACTCTATCGGCGGTCACTTCCTGCATCTGCTGCACGGCGAAAAGCCGTCGCAAAGCTGGGAAAAGGCGATGCATATCTCGCTGGTGCTGTACGCCGAACCCGAGt > 7:83162/1‑140 (MQ=255)
aCGGCGAACGCATCCAGCCGGAAACTGATGACGACTCTATCGGCGGTCACTTCCTGCATCTGCTGCACGGCGAAAAGCCGTCGCAAAGCTGGGAAAAGGCGATGCATATCTCGCTGGTGCTGTACGCCGAACACGAGt > 3:1140955/1‑138 (MQ=255)
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ATGCGCACCGGCGTTTCCGCGCTCGGCTGCACGCTGCCAGAAAAAGAGGGGCACACCGTTTCTGGTGCGCGGGATATTGCCGACAAACTGCTGGCGTCACTTAGTTCGATTCTTCTCTACTGGTATCACTACAGCCACAACGGCGAACGCATCCAGCCGGAAACTGATGACGACTCTATCGGCGGTCACTTCCTGCATCTGCTGCACGGCGAAAAGCCGTCGCAAAGCTGGGAAAAGGCGATGCATATCTCGCTGGTGCTGTACGCCGAACACGAGT > NZ_CP022686/3925150‑3925426
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| Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
N/A
