Notes

Publication: None

ALE, flask, and isolate counts

ALE replicate Flask count Isolate count
0 1 1
1 3 3
2 3 3
3 3 3
4 3 3
5 3 3
6 16 16

ALE experiment mutation counts

Mutation Type Unique Observed
Single Base Substitutions 3 18
Multiple Base Substitutions 1 16
Deletions 4 61
Insertions 3 47
Mobile Element Insertions 0 0
Amplifications 53 65
Gene Conversions 0 0
Inversions 0 0
Total 64 207

Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.
ALE, Flask, Isolate Predicted Mutations Unassigned Missing Coverage Evidence Mean Coverage Total Reads Percent Mapped Mapped Reads Average Read Length
A0 F0 I1 R1 26 0 2313.4 5938562 98.4% 5843545 134.7
A1 F2 I0 R1 329 0 9328.3 11206794 98.3% 11016278 135.5
A1 F15 I0 R1 179 0 6850.5 8193630 98.4% 8062531 136.5
A1 F37 I0 R1 268 0 9067.3 10159180 98.4% 9996633 136.1
A2 F2 I0 R1 162 0 5483.2 7950084 98.4% 7822882 136.0
A2 F14 I0 R1 301 0 12546.2 11066968 98.5% 10900963 136.4
A2 F38 I0 R1 191 0 5938.1 7998235 98.2% 7854266 135.0
A3 F2 I0 R1 269 0 9306.5 10003366 98.4% 9843312 135.8
A3 F14 I0 R1 114 0 6685.5 6592698 98.4% 6487214 136.5
A3 F38 I0 R1 143 0 8969.0 7493458 98.4% 7373562 135.7
A4 F2 I0 R1 215 0 6809.1 8736172 98.4% 8596393 135.4
A4 F14 I0 R1 243 0 9199.9 9486253 98.5% 9343959 136.3
A4 F38 I0 R1 134 0 7855.2 7743036 98.3% 7611404 135.0
A5 F2 I0 R1 186 0 6890.1 8034948 98.4% 7906388 135.7
A5 F14 I0 R1 224 0 10656.8 9481706 98.4% 9329998 136.1
A5 F38 I0 R1 365 0 9696.4 11730172 98.5% 11554219 136.3

Mutation Needle Plot

Mutation Targets

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