mutation predictions | marginal predictions | summary statistics | genome diff | command line log
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breseq version 0.35.4 revision f352f80f4bc9
mutation predictions | marginal predictions | summary statistics | genome diff | command line log |
| Marginal new junction evidence (lowest skew 10 of 21 shown) | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | AE015451 | = 5986679 | 66 (1.070) | 3 (0.050) | 3/328 | NT | 4.4% | coding (946/987 nt) | PP_5245 | Transcriptional regulator, AraC family |
| ? | AE015451 | = 5986783 | 69 (1.170) | intergenic (+63/‑136) | PP_5245/kefB‑III | Transcriptional regulator, AraC family/glutathione‑regulated potassium/H+ antiporter | |||||
| * | ? | AE015451 | = 5964760 | 59 (0.950) | 3 (0.050) | 3/328 | NT | 5.0% | coding (850/900 nt) | xerC | Tyrosine recombinase XerC |
| ? | AE015451 | = 5964852 | 58 (0.980) | coding (46/696 nt) | had | putative (S)‑2‑haloacid dehalogenase | |||||
| * | ? | AE015451 | 5964136 = | 71 (1.150) | 3 (0.050) | 3/322 | NT | 4.5% | coding (226/900 nt) | xerC | Tyrosine recombinase XerC |
| ? | AE015451 | 5964263 = | 61 (1.050) | coding (353/900 nt) | xerC | Tyrosine recombinase XerC | |||||
| * | ? | AE015451 | 5744108 = | 92 (1.490) | 3 (0.050) | 3/332 | NT | 3.3% | coding (1757/2451 nt) | glgP | glycogen phosphorylase |
| ? | AE015451 | 5744125 = | 88 (1.470) | coding (1740/2451 nt) | glgP | glycogen phosphorylase | |||||
| * | ? | AE015451 | = 5395583 | 78 (1.260) | 4 (0.070) | 4/330 | NT | 5.0% | coding (61/1470 nt) | hsdM | Type I restriction enzyme EcoEI M protein |
| ? | AE015451 | = 5395587 | 78 (1.310) | coding (65/1470 nt) | hsdM | Type I restriction enzyme EcoEI M protein | |||||
| * | ? | AE015451 | = 5205320 | 63 (1.020) | 3 (0.050) | 3/326 | NT | 3.9% | coding (1113/1209 nt) | PP_4586 | conserved exported protein of unknown function |
| ? | AE015451 | = 5205480 | 89 (1.520) | coding (953/1209 nt) | PP_4586 | conserved exported protein of unknown function | |||||
| * | ? | AE015451 | 4997339 = | 67 (1.080) | 3 (0.050) | 3/324 | NT | 4.8% | coding (762/999 nt) | PP_4405 | Sensory box protein |
| ? | AE015451 | 4997508 = | 56 (0.960) | coding (593/999 nt) | PP_4405 | Sensory box protein | |||||
| * | ? | AE015451 | 4972749 = | 71 (1.150) | 3 (0.050) | 3/330 | NT | 4.6% | coding (799/1566 nt) | flgL | Flagellar hook‑associated protein FlgL |
| ? | AE015451 | 4972820 = | 56 (0.940) | coding (728/1566 nt) | flgL | Flagellar hook‑associated protein FlgL | |||||
| * | ? | AE015451 | 4265494 = | 88 (1.420) | 3 (0.050) | 3/328 | NT | 3.8% | coding (707/951 nt) | vanB | vanillate O‑demethylase oxidoreductase |
| ? | AE015451 | 4265623 = | 70 (1.190) | coding (836/951 nt) | vanB | vanillate O‑demethylase oxidoreductase | |||||
| * | ? | AE015451 | 3784356 = | 61 (0.990) | 3 (0.050) | 3/326 | NT | 4.9% | coding (680/822 nt) | nikE | Nickel transporter ATP‑binding protein |
| ? | AE015451 | 3784455 = | 58 (0.990) | coding (779/822 nt) | nikE | Nickel transporter ATP‑binding protein | |||||