mutation predictions | marginal predictions | summary statistics | genome diff | command line log
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breseq version 0.29.0 revision 8f9c342918e4
mutation predictions | marginal predictions | summary statistics | genome diff | command line log |
| Marginal new junction evidence (lowest skew 10 of 1194 shown) | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | 4634391 = | 130 (0.960) | 7 (0.060) | 6/164 | NT | 5.7% | coding (595/648 nt) | ytjC | phosphatase |
| ? | NC_000913 | 4634423 = | 114 (0.910) | coding (627/648 nt) | ytjC | phosphatase | |||||
| * | ? | NC_000913 | 4630741 = | 168 (1.240) | 5 (0.040) | 5/166 | NT | 3.3% | coding (9/1938 nt) | slt | lytic murein transglycosylase, soluble |
| ? | NC_000913 | 4630772 = | 140 (1.110) | coding (40/1938 nt) | slt | lytic murein transglycosylase, soluble | |||||
| * | ? | NC_000913 | 4629401 = | 142 (1.050) | 5 (0.040) | 5/164 | NT | 3.7% | coding (1122/1668 nt) | ettA | energy‑dependent translational throttle A |
| ? | NC_000913 | 4629431 = | 127 (1.020) | coding (1092/1668 nt) | ettA | energy‑dependent translational throttle A | |||||
| * | ? | NC_000913 | = 4627665 | 107 (0.790) | 9 (0.070) | 7/170 | NT | 7.9% | coding (351/1233 nt) | nadR | trifunctional protein: nicotinamide mononucleotide adenylyltransferase, ribosylnicotinamide kinase, transcriptional repressor |
| ? | NC_000913 | = 4627683 | 107 (0.830) | coding (369/1233 nt) | nadR | trifunctional protein: nicotinamide mononucleotide adenylyltransferase, ribosylnicotinamide kinase, transcriptional repressor | |||||
| * | ? | NC_000913 | = 4624006 | 114 (0.840) | 4 (0.030) | 4/168 | NT | 3.6% | coding (112/1017 nt) | lplA | lipoate‑protein ligase A |
| ? | NC_000913 | = 4624037 | 105 (0.820) | coding (81/1017 nt) | lplA | lipoate‑protein ligase A | |||||
| * | ? | NC_000913 | = 4623082 | 157 (1.160) | 20 (0.150) | 9/170 | NT | 12.1% | coding (1314/1332 nt) | yjjJ | putative protein kinase |
| ? | NC_000913 | = 4623098 | 141 (1.090) | coding (1330/1332 nt) | yjjJ | putative protein kinase | |||||
| * | ? | NC_000913 | 4617850 = | 134 (0.990) | 17 (0.130) | 6/170 | NT | 11.8% | coding (528/780 nt) | deoC | 2‑deoxyribose‑5‑phosphate aldolase, NAD(P)‑linked |
| ? | NC_000913 | 4617871 = | 126 (0.970) | coding (549/780 nt) | deoC | 2‑deoxyribose‑5‑phosphate aldolase, NAD(P)‑linked | |||||
| * | ? | NC_000913 | 4608119 = | 124 (0.920) | 10 (0.080) | 6/166 | NT | 7.4% | coding (317/414 nt) | holD | DNA polymerase III, psi subunit |
| ? | NC_000913 | 4608161 = | 134 (1.060) | coding (359/414 nt) | holD | DNA polymerase III, psi subunit | |||||
| * | ? | NC_000913 | 4602159 = | 128 (0.950) | 16 (0.130) | 9/164 | NT | 12.4% | coding (700/771 nt) | yjjP | DUF1212 family inner membrane protein |
| ? | NC_000913 | 4602186 = | 109 (0.870) | coding (673/771 nt) | yjjP | DUF1212 family inner membrane protein | |||||
| * | ? | NC_000913 | 4596273 = | 119 (0.880) | 7 (0.050) | 5/168 | NT | 5.9% | coding (284/1023 nt) | lgoD | L‑galactonate oxidoreductase; L‑gulonate oxidoreductase |
| ? | NC_000913 | 4596294 = | 110 (0.860) | coding (305/1023 nt) | lgoD | L‑galactonate oxidoreductase; L‑gulonate oxidoreductase | |||||