Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A12 F13 I0 R1
|
206 |
15500.2 |
9478722 |
98.3% |
9317583 |
135.2 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
freq |
annotation |
gene |
description |
| RA |
NZ_CP022686 |
4,056,962 |
C→A |
19.9% |
F137L (TTC→TTA) |
adk → |
adenylate kinase |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NZ_CP022686 | 4,056,962 | 0 | C | A | 19.9%
| 161.3
/ 5.5
| 127 | F137L (TTC→TTA) | adk | adenylate kinase |
| Reads supporting (aligned to +/- strand): ref base C (22/68); new base A (24/8); total (51/76) |
| Fisher's exact test for biased strand distribution p-value = 1.01e-06 |
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 |
Only 100 of 127 total aligned reads displayed.
AGGCAGACGCGATGAAAGAAGCGGGCATCAATGTTGATTACGTTCTGGAATTCGACGTACCGGACGAACTGATTGTTGACCGTATCGTAGGCCGCCGCGTTCACGCGCCGTCTGGTCGTGTTTATCACGTTAAATTCAATCCGCCGAAAGTAGAAGGCAAAGACGAC‑GTTACCGGTGAAGAACTGACTACCCGTAAAGACGATCAGGAAGAGACCGTACGTAAACGTCTGGTTGAATACCATCAGATGACTGCACCGCTGATCGGCTACT > NZ_CP022686/4056826‑4057095
|
aggcagACGCGATGAAAGAAGCGGGCATCAATGTTGATTACGTTCTGGAATTCGACGTACCGGACGAACTGATTGTTGACCGTATCGTAGGCCGCCGCGTTCACGCGCCGTCTGGTCGTGTTTATCACGTTAAATTCa < 2:257190/138‑1 (MQ=255)
gcagACGCGATGAAAGAAGCGGGCATCAATGTTGATTACGTTCTGGAATTCGACGTACCGGACGAACTGATTGTTGCCCGTATCGTAGGCCGCCGCGTTCACGCGCCGTCTGGTCGTGTTTATCACGTTAAATTCAATcc > 4:493294/1‑140 (MQ=255)
cgcgATGAAAGAAGCGGGCATCAATGTTGATTACGTTCTGGAATTCGACGTACCGGACGCACTGATTGTTGACCGTCTCGTAGGCCGCCGCGTTCACGCGCCGTCTGGTCGTGTTTATCACGTTAAATTCAATccgcc < 6:395534/138‑1 (MQ=255)
cgcgATGAAAGAAGCGGGCATCAATGTTGATTACGTTCTGGAATTCGACGTACCGGACGAACTGATTGTTGACCGTATCGTAGGCCGCCGCGTTCACGCGCCGTCTGGTCGTGTTTATAACGTTAAATTAAATacgcc > 5:647434/1‑138 (MQ=255)
cgATGAAAGAAGCGGGCATCAATGTTGATTACGTTCTGGAATTCGACGTACCGGACGAACTGATTGTTGACCGTATCGTAGGCCGCCGCGTTCACGCGCCGTCTGGTCGTGTTTATCACGTTAAATTCAATCCGCCGaaa < 4:1060554/140‑1 (MQ=255)
taaaGAAGCGGGCATCAATGTTGATTACGTTCTGGAATTCGACGTACCGGACGAACTGATTGTTGACCGTATCGTAGGCCGCCGCGTTCACGCGCCGTCTGGTCGTGTTTATCACGTTAAATTCAATCCGCCGAAAGTAg < 7:587008/139‑1 (MQ=255)
gAAAGAAGCGGGCATCAATGTTGATTACGTTCTGGAATTCGACGTACCGGACTAACTGATTGTTGACCGTATCGTAGGCCGCCGCGTTCACGCGCCGTCTGGTCGTTTTTATCACGTTAAATTCAATCCGCCGAAAGTAg < 8:11172/140‑1 (MQ=255)
gAAAGAAGCGGGCATCAATGTTGATTACGTTCTGGAATTCGACGTACCGGACGAACTGATTGTTGACCGTATCGTAGGCCGCCGCGTTCACGCGCCGTCTGGTCGTGTTTATCACGTTAAATTCAATCCGCCGAAAGt < 5:1020265/138‑1 (MQ=255)
gAAAGAAGCGGGCATCAATGTTGATTACGTTCTGGAATTCGACGTACCGGACGAACTGATTGTTGACCGTATCGTAGGCCGCCGCGTTCACGCGCCGTCTGGTCGTGTTTATCACGTTAAATTCAATCCGCCGAAAGTAg < 7:345838/140‑1 (MQ=255)
taagGGGGAATCATTGTTTATTACTTTCTGTATTTCGACGTACCGTACTAACTGTTTTTTGACCGTTTCGTAGGCTGCCGCGTTCACGCGCGGTGTGGTCGTGTTTATCACGTTAAATTCATTCCGCCTAATGTTGATgg < 8:429482/139‑1 (MQ=255)
aagCGGGCATCAATGTTGATTACGTTCTGGAATTCGACGTGCCGGACGAACTGATTGTTGACCGTATCGTAGGCCGCCGCGTTCACGCGCCGTCTGGTCGTGTTTAACACGTTAAATTAAATCCGCCGAAAGTACaac > 1:1178223/1‑137 (MQ=255)
agCGGGCATCAATGTTGATTACGTTCTGGAATTCGACGTACCGGACGAACTGATTGTTGACCGTATCGTAGGCCGCCGCGTTCACGCGCCGTCTGGTCGTGTTTATCACGTTAAATTCAATCCGCCGAAAGTAGAAGGCa < 3:45021/140‑1 (MQ=255)
gggCATCAATGTTGATTACGTTCTGGAATTCGACGTACCGGACGAACTGATTGTTGACCGTATCGTAGGCCGCCGCGTTCACGCGCCGTCTGGTCGTGTTTTTCACGTTAAATTAAATCCGCCGAAATTAGAAGGCaa > 5:128904/1‑138 (MQ=255)
gCATCAATGTTGATTACGTTCTGTAATTCTACGTACCGGACGAACTGATTGTTGACGGTATCGACGGCCGCCGCGTTCACGCGCGGTCGGGTCGTGTTAATCACGTTAAATTCAATCCGCCGAAAGTAGAAGCCaaac < 5:908672/138‑2 (MQ=255)
cAATGTTGATTACGTTCTGGAATTCGACGTACCGGACGAACTGATTGTTGACCGTATCGTAGGCCGCCGCGTTCACGCGCCGTCTGGTCGTGTTTATCACGTTAAATTGCATCCGCCGAAAGTTGAAGGCAAAGacgcc‑g > 4:381703/1‑140 (MQ=255)
gTTGATTACGTTGTGGAATTCGACGTACCGGACGAACTGATTGTTGACCGTATCGTAGGCCGCCGCGTTCACGCGCCGTCTGGTCGTGTTTATCACGTTAAATTCAATCCGCCGAAAGTATAAGGAAAAGACGAC‑Gtt < 2:868492/138‑1 (MQ=255)
gTTGATTACGTTCTGTAATTCGACGTACCGGACTAACTGATTGTTGACCGTATCGTAGGCCGCCGCGTTCACGCGCCGGCTGGTCGTGTTTATCACGTTAAATTCAATCCGCCGAAAGTAGAAGGCAAAGACGAC‑Gtt < 2:588677/138‑1 (MQ=255)
tACGTTCTGGAATTCGACGTACCGGACGAACTGATTGTTGACCGTATCGTAGGCCGCCGCGTTCACGCGCCGTCTGGTCGTGTTTATCACGTTAAATTAAATCCCCCCAAAGTAGAAGGCAAAGACGAC‑GGTaaccggga > 8:395628/1‑133 (MQ=255)
tACGTTCTGGAATTCGACGTACCGGACGAACTGATTGTTGACCGTATCGTAGGCCGCCGCGTTCACGCGCCGTCTGGTCGGTTTTATAACGTTTAATTAACTCAGCCCAAATTATAAGGCAAAGACGAC‑CTTACAGGt > 6:691902/1‑138 (MQ=255)
tACGTTCTGGAATTCGACGTACCGGACGAACTGATTGTTGACCGTATCGTAGGCCGCCGCGTTCACCCGCCGTCTGGTCGTGTTTATAAACTTAAAATCAATCCGCAGAAAGTAGAAGGCAAAACCGAC‑GTTAACggg > 1:269609/1‑137 (MQ=255)
tACGTTCTGGAATTCGACGTACCGGACGAACTGATTGTTGACCGTATCGTAGGCAGCCGCGTTACCGCGCCGTCTGGTCGTGTTTTTAACGTTTAATTAAATCAGCCGAAAGTATCAGTCAAAGACGAC‑GGTACAggg > 2:378729/1‑137 (MQ=255)
gTTCTGGAATTCGACGTACCGGACGAACTGATTGTTGACCGTATCGTAGGCCGCCGCGTTCACGCTACGTCTGGTCGTGTTTATAACGGTAAATTCAATACGGCGCAAGTAGCAGGCAAAGACGCC‑GTTTCCGGTgcata > 4:105228/1‑136 (MQ=255)
ttCTGGAATTCGACGTACCGGACGAACTGATTGTTGACCGTATCGTAGGCCGCCGCGTTCACGCGCCGTCTGGTCGTGTTTATCACGTAAAATTCAATCCCCCGAAAGTAGACGGCAAAGACGAC‑GTTACCGGTgaagaa < 3:613/140‑1 (MQ=255)
tCTGGAATTCGACGTACCGGACGAACTGATTGTTGACCGTATCGTAGGCCGCCGCGTTCACGCGCCGTCTGGTCGTGGTTTTAAACTTTAAATAAAACCGCCCAAATTAAAACGCCAAAACGAC‑GGTAACGGTgcacc > 5:37882/1‑134 (MQ=255)
tCTGGAATTCGACGTACCGGACGAACTGATTGTTGACCGTATCGTAGGCCGCCGCGTTCACGCGCCGTCAGGTCGTGTTTATGACGTTAAATTCAATCCGCCGGAATTAGACGGCAAAGACCTC‑CTTTCCGGTgcaga > 1:455801/1‑138 (MQ=255)
ggAATTCGACGTACCGGACGAACTGATTGTTGACCGTATCGTAGGCCGCCGCGTTCACGCGCCGTCGGGTCGTGTTTATAAAGTTAAATTAAATCCGCCGCAAGGAGAAGGCAAAGACCAC‑GTTTACGGTGAATAACttc > 7:893704/1‑138 (MQ=255)
taaTTCGACGTCCCGGACTAACTGATTGTTGACCGTATCGTCGGCCGCCGCGTTCACGCGCCGGCTGGTCGTGTTTATCACGTTAAATTCAATCCCCCGAAAGTAGATGGCAAAGACGAC‑GTTACCGGTGAAGAACTg < 1:456648/137‑1 (MQ=255)
aaTTCGCCGTACCGGACTAACTGATTGTTGCCCGTATCGTAGGCCGCCGCGTGCACGCGCCGTCTGGTCGGGTTTATCACGTTAAATTCAATCCGCCTAACGAAGAAGGCAACGACGAC‑GTTACCGGTGAAGAACTGa < 6:942806/138‑1 (MQ=255)
aaTTCGAGGTACGGGACTAACTGATTGTTGCCCGTATCGTAGCCCGCCGCGTTCACGCGCCGTCTGGTCGTGTTTATCACGTTAATTTCAATCCGCCTAAAGTAGAAGGCAAAGACGAC‑GTTACCGGTGAAGAACTGa < 6:191737/138‑1 (MQ=255)
tccGAGGTACCGGACGAACTTATTGTTTACCGTATCGTAGGCCGCCGCGTGCACGCGCCGTCTGGTCGTGTTTATCACTTTAAATTCAATCCGCCGAAAGTAGAAGGCAATGACGAC‑GTTACCGGTGAAGAACTGACTAc < 7:547721/138‑1 (MQ=255)
cGACGTACCGGACGAACTGATTGTTGACCGTATCGTAGGCCGCCGCGTTCACGCGCCGTCTGGTCGTGGTTATCACCTTAAATTCAATCCGCCGCAAGTAAAAGGCAAAGACGAC‑GTGACCGGGGAAGACCTGACTAccc > 4:955419/1‑140 (MQ=255)
cGTCCCGGCCGAACTCATTGTTGACCGTAGCGAAGCCCGCCGCGTTCACGCGCCGTCTGGTCGTGTTTATCACGTAAAATTCAATCCGCCGAAAGTAGACGGCAACGCCGAC‑GTTACCGGTGAAGAACTGACTACCCGTa < 4:408528/140‑1 (MQ=255)
cGTACCGGACTAACTGATTTTTGACCGTATCGTAGGCCGCCGCGTTCACGCGCGGTCTGGGCGTGTTTATCACGTTAAATTCAATCCGCCGAAAGTAGAAGGCAAAGACGAC‑GTTACCGGTGAAGAACTGACTACCCGTa < 7:776465/140‑1 (MQ=255)
ccGGACTAAGTGATTGTTGACCTTTTCGTAGGCCGCCGCGTTCACGCGCCGTGTGGGCGTGTTTATCACGTTAAATTCAATCCGCCGAAAGTAGAAGGCAAAGACGAC‑GTTACCGGTGAAGAACTGACTACCCGTaaa < 1:360510/138‑1 (MQ=255)
ccGGACGAACTGTTTGTTGACCGTATCGTAGGCCGCCGCGTGCACGCGCCGTCTGGTGGTGTTTATCACGTTAAATTCAATCCGCCGAAAGTAGAAGGCAAAGACGAC‑GTTACCGGTGAAGAACTGACTACCCGTAAAGa < 8:118399/140‑1 (MQ=255)
ccGGACGAACTGATTGTTGACCGTATCGTAGGCCGCCGCGTTCACGCGCCGTCTGGTCGTGTTTATCACGTTAAATTCAATCCGCCGAAAGTAGAAGCCAAAGACGAC‑GTTACCGGTGAAGAACTGACTACCCGTAAAGa < 3:1046028/140‑1 (MQ=255)
ccGGACGAACTGATGGTTGACCGTAGCGTCGGCCGCCTCGTTCACGGGCCGTCTGGGCGTGTTTATCACGTTAAATTCAATCGGCCTAAAGTAGACTGCAAAGACGAC‑GTTACCGGTGAAGAACTGACTACCCGTaaa < 2:343671/138‑1 (MQ=255)
ggACTAACTGATTGTTGACCGTAGGTTAGGCCGCCGCGTACAGGCGCCGTGTGGTCGTGTTTATCACGTTAAATTCAATCCGCCGATAGTAGACGGCAAAGACGAC‑GTTACCGGTGAAGAACTGACTACCCGTAAAGACg < 3:169689/140‑1 (MQ=255)
cctaaCTGATTTTTGACCGTATCGTCGGCCGCCGCGTTCACGCGCCGTCTTGGCTTGTTTATCACGTTAAATTCAATCCGCCGAAAGTCGATGGCAAAGACGAC‑GTTACCGGTGAAGAACTGACTACCCGTAAAGACGAt < 8:231010/137‑1 (MQ=255)
ccgtaCTGTTTGGTGACGGTTTCGTTGGCCGCCGCGTTCACGCGCCGTGTGGTGGGTTTTTTAACGTTAATTTCAATCCGCCGAAATTATAATGAAAAGACGAC‑GTTACCGGTGAAGAACTGACTACCCGTAAAGACg < 1:759839/134‑1 (MQ=255)
agttaCTGATTTTTGACGTTATCGTAGGCGGCCGCGTTCACGCGCGGTGTGGTCGTGTTTATCAAGTTAATTTAAATCCGCCTAACGTAGACGGCATAGACGAC‑GTTAGCGGTGAAGAACTGACTACCCGTAAAGACg < 2:1217367/134‑1 (MQ=255)
aCGAATTGCTTGTTGACCGTAGCGTTGGCCGCGGCGTTCACGCGCCGTCTGGTCGTGTTTATCACGTTAAATTCAATCCGCCGAAAGTAGACCGCAACCACGAC‑GTTACCGGTGAAGAACTGACTCCCCGTAAAGCCGAt < 8:447270/140‑1 (MQ=255)
aCGAACTGTTTGTTGACCGTATCGTAGGCCGCCGCGTTCACGCGCCGTCTGGTCGTGTTTATCACGTTAAATTCAATCGGCCTAATGTACAAGGCAAAGACGAC‑GTTACCGGTGAAGAACTGACTACCCGTAAAGACg < 1:306031/138‑1 (MQ=255)
aCGAACTGATTGTTGACCTTATCGTCGGCCGCCGCGTTCACGCGCCGTCTGGTCGTGTTTATCACGTAAAATTCAATCCGCCGAAAGTAGAAGGCAAAGACGAC‑GTTACCGGTGAAGAACTGACTACCCGTAAAGACGAt < 8:229931/140‑1 (MQ=255)
aCGAACTGATTGTTGACCTTATCGTAGGCCGCCGCTTTCACGCGCCGTCTGGTCGTGTTTATAACGTTAAATTCAATCCGCCGAAATTAGAAGTCAATGACGAC‑GTTACCGTTGAAGAACTGACTACCCGTAAAGACg < 2:1034561/138‑1 (MQ=255)
aCGAACTGATTGTTGACCGTATCGTAGGCCGCCGCGTTCAAGCGCCGTCAGGGCGTGGTTATCACGGTAAAATAAATAACCCGTAAATAGAACGCAAATACACC‑GGTAGCCGAGAATAACTGACAAACCCTAAAgccaca > 8:52488/1‑135 (MQ=255)
aCGAACTGATTGGTGACCGTATCGTCGGCCGCCGCTTTCACGCGCGGTGTGGTCGTGTTAATCACGTTAAATTCAATCCGCCTAATTTAGAAGGAAAAGACGAC‑GTTACCGGTGAAGAACTGACTACCCGTAAAGACg < 6:251495/138‑1 (MQ=255)
actttttgttgACCTTATGGTTGGCCGCCGCGTTCACGCGCGGTCTGTGCTTGTTTTTCACGTTAAATTAAATCCGCTGAAATTAGAAGGCAAAGACGAC‑GTTACCGGTGAAGAACTGACTACCCGTAAAGACGATCa < 5:272054/133‑1 (MQ=255)
aCTGATTGTTGACCGTATCGTAGGCCGCCGCGTTCACGCGCCGTCTGGTCGTGTTTATCCAGGTAAATTGAATCCGCCGAAAGTAGAACGCAAAGACGAC‑GTTAACGGTGAAGAACAGACGTCCCCTAAAGACGATCAgg > 8:451474/1‑140 (MQ=255)
aCTGATTGTTGACCGTATCGTAGGCCGCCGCGTTCACGCGCCGTCTGGTCGTGTTTATAACGTTAAATTAAATACGCCGAAAGTATAAGGCAAAGACGAC‑GTGAACCGGGAAGAACAGACTAACCGTAAATACCATCaag > 8:589912/1‑138 (MQ=255)
tttgttgACCTTATCGTAGGCCGCCGCGTTCACGCGCCGTCTGGTCTTGTTTATCACTTTAAATTCAATCCGCCTAAAGTAGAAGGCAAAGACGAC‑GTTACCGGTGAAGAACTGACTACCCGTAAAGACGATCAGGaa < 6:380601/137‑1 (MQ=255)
tcccGTATCGTAGGCCGCCGCGGTCACGCGCCGTCTGGGCGTGTTTATCACTTTAAATTCAATCCGCCGAAAGTAGACGGCAAAGACGAC‑GTTACCGGTGAAGAACTGACTACCCGTAAAGACGATCAGGAAGAGAcc < 2:357750/136‑1 (MQ=255)
ccGTATCGTAGGCCGCCGCGTTCACGCGCCGTCTGGTCGTGGTTATAACGTTAAATTAAAAACGCCCAAAGTAGAAGGCAAAGAACAC‑GTTACCGGGTAAGAACATACTACCCGTAAAGACGAAAAAGAAGAGAccat > 2:132413/1‑136 (MQ=255)
gTATCGTAGGCCGCCGCGTTCACGCGCCGTCTGGTCGTGTTTATCTCGGTAAAATAAATGCGCGTGAAGTAGGAGGCAAAGACGGC‑GTGACCGGGGAAGAACTGACTACCCGTAAAGGGGATCAGGAAGCGCCcgttcgg > 8:182320/1‑139 (MQ=255)
tATCGTAGGCCGCCGCGTTCACGCGCCGTCTGGTCGTGTTTATCACGTTAAATTCAATCCGCCGAAAGTAGACGGCAAACACGAC‑GTTACCGGTGAAGAACTGACTACCCGTAAAGACGATCAGGAAGAGACcgtacgta < 4:588486/140‑1 (MQ=255)
tATCGTAGGCCGCCGCGTCCACTGGCGGTCTGGTCGTGTTTTTAACTTTAAATTCAATCCGCCGAACGTAGAAGGCAAAGACGAG‑GTTACCGGTTAAGAACTGACTACCAGTAAAGACGATCAGGAAGAGACcgtacg < 2:263545/138‑1 (MQ=255)
aTCGTAGGCCGCCGCGTTCACGCGCCGTCTGGTCGTGTTTATCACGTTAAATTCAATCCGCCGAAAGTAGAAGGCAAAGACGAC‑GGTACGGGTGAAGAACTGTCTACCCGGAAAGACGCTCAGGAAGATCCCGTTCGGaa > 4:310833/1‑140 (MQ=255)
tCGTAGGCCGCCGCGTTCACGCGCCGTCTGGTCGTGGTTTTCAAGGTTAAATGAAACCGCCCAAAGTAGAAGGCAAAGACCACGGTTACC‑GTGAAGAACAGCCTACCCGGAAAAGAGATCAGGTATAGACcgtacgta > 2:140321/1‑138 (MQ=255)
gtgcggccgcTGTCACGCGCCGTCTGGGCGTGTTTATCTCGTTAAATTCAATCCGCCGAAAGTTGAAGGCAATCACGAC‑GTTACCGGTGAAGAACTGACTACCCGTAAAGACGATCAGGAAGAGACCGTACGTAAACGTc < 4:557207/135‑1 (MQ=255)
cggCCGCCGCGTTCACTCGACGTCTGGTCTTCTTTATCACTATAAATTCAATCCCCCGAAAGTATAAGCAAAAGACGAC‑TTTACCGGTGAAGAACTTACTACCCGTAAAGACGATCAGGAAGAGACAGTACGTAAACg < 2:592434/137‑1 (MQ=255)
cggCCGCCGCGTTCACGCGCCGTCTGGTCGTGTTTATCACGTTAAATTCAATCCGCCGAAAGTAGAAGGCAAAGACGAC‑GTTACCGGTGAAGAACTGACTACCCGTAAAGACGATCAGGAAGAGACCGTACGTAAACg < 1:481973/137‑1 (MQ=255)
aGGCCGCCGCGTTCACGCGCCGTATGGTCGTGTTTATAACGTTAAATTAAATCCGCCGAACGTAGAAGGCAAAGACGAC‑GTTACCGGTGAAGAACTGACTACCCGTAAAGACGATCAGGAAGAGACCGTACGTAAACGTc < 8:605365/140‑1 (MQ=255)
ggCCGCCGCGTTCACGCGCCGTCTGGTCGTGTTTATCACGGTAAATTAAATCCGCCGAAAGTTGAAGGCAAAGACGAC‑GTTAACGGTGAAGAACTGACTACCCGGAAAGACTATCAGGAAGTGCCCGTACGTAAACgg > 2:747812/1‑137 (MQ=255)
cgccgcGTTCACGCGCCGTCTGGTCGTGTTTATCACGTTAAATTAAATCCGCCGCAATTAGAAGGCAAAGACGAC‑GTTAACGGTGAAGCACTGAATTCCCGGAAAGACGATCAGGAAGAGACCGTACGGAAACGGCTGGt > 8:160276/1‑140 (MQ=255)
cgccgcGTTCACGCGCCGTCTGGTCGTGTTTATCACGGTAAATTAAAACCCCCGAAAGTAGAAGGCCAAGACGAC‑GGTACCGGTGAATAACTGACTACCCGTAAAACCGAACAGGAAGAGACCGTACGTAAACGtagggt > 8:820432/1‑135 (MQ=255)
cgccgcGTTCACGCGCCGTCTGGTCGTGGTTTTCACGGTAAATTGAATCCGCCGAAAGTAGAAGGCAAAGACGAC‑GGTACCGGTGGAGAACTGACGTCCCGGAAAGACGATCAGGAAGAGACCGTACGTAAACGTCTGGt > 4:490278/1‑140 (MQ=255)
cgccccTTTCACTCGCCGTCGGGTCGTGTTTTTCACGTTAAATTCAATCCGCCTAAATTAGAAGGCAAAGACGAA‑GTTACCGGTGAATAACTGACTACCCGTAAAGACGATCAGGAAGAGACCGTAAGTAAACGTCTGGt < 7:1037863/140‑1 (MQ=255)
ccgcGTTCACGCGCCGTCTGGTCGTGTTTATAACGTTAAATTCAATACGCCGAAAGTAGAAGGTAAAGCAGAC‑GTTACCGGTGAAGAACTGTCTACCCGTAAAGACGCTCAGGAAGAGCCCGTACGTAAACGTCGTGTTg > 8:487888/1‑140 (MQ=255)
ccgcGTTCACGCGCCGTCTGGGCGTGTTTATAACGGTAAATACCATACGCCGAAATTAGAATGCAAATCACCC‑GTTACCGGTTCAGAACAGACAACCCGTAAAAACGATCAGGAAGAGACCCTAAGTAAACGTATGGTTg > 4:124084/1‑140 (MQ=255)
cgcgTTCACGCGCGGTCTGGTCGTGTTTATCACTTTAAATTCAATCCGCCGAAAGTAGAAGGCAAACACGAC‑GTTACCGGTGAAGAACTGACTACCCGTAAAGACGATCAGGAAGAGACCGTACGTAAACGTCTGGtt < 1:820957/138‑1 (MQ=255)
cgcgTTCACGCGCCGTCTGGTCGTGTTTATCACGTTTAATTCAATCCGCCGAAAGTAGAAGGCAAAGACGAC‑GTTACCGGTGAAGAACTGACTACCCGTAAAGACGATCAGGAAGATACCGTACGGAAACGTCTGGTTgt > 4:762952/1‑139 (MQ=255)
ggtttCACGCGCCGTCGGGTCGTGTTTATCACGTTAAATTCAATCCGCCTTTATTACAAGGAAATCACGAC‑GTTACCGCTGTAGATCTGACTACCCGTAATGACGATCAGGAAGAGAGCGTACGTAAACGTCTGGTTGaa < 3:190371/137‑1 (MQ=255)
gctttCCCGCGCGGTCTGGTGGTGTTTATCACTTTAAATTCAATCCCCCGAAAGTAGAAGCAAACGACGAC‑GTTACCGGTGAAGAACTGACTACCCGTAAAGACGATCAGGAAGAGACCGTACGTAAACGTCTGGTTg < 5:1086156/135‑1 (MQ=255)
gcgTTCACGCGCCGTCTGGTCGTGTTTTTCACGGTAAATTCAATCCGCCGAAAGTAGAAGGGAAAGACGAC‑CTTACCCGTGAAGAACTGACTTCCCGTAAAGACGATCATGAAGAGACCCTACGTAAACCTCTGGttt > 2:468047/1‑137 (MQ=255)
ggTTCCCGCGCCGACTGGTGGTGTTTATCACTTTAAATTCAATCGGCGGAAATGAGAACGAAAGGACGAC‑GTTTCATTTGAAGAACTGACTACACGTAAAGACCATCAGGAAGAGACCTTACGTAAACGTCTGGTTGa < 6:483372/137‑1 (MQ=255)
cgTTCACGCGCCGTCTGGTCGTGTTTATCACGTTAAATTCAATCCGCCGAAAGTAGAAGGCAAAGACGCC‑GTTTCCGGTGAAGAACTGACTACCCGTAAAGACAATAAGGAAGAGACCGTACGTAAACGTCTGGGTGa > 2:402754/1‑138 (MQ=255)
cgTTCACGCGCCGTCTGGGCGTGTTTAACATGTTAAATTAAATCCGCCGAAATTAGAAGGCAAAGACGAC‑GTTACCGGTGAAGAACTGACTACCCGTAAAGACGATCAGGAAGAGACCGTACGTAAACGTCTGGTTGa < 6:239777/138‑1 (MQ=255)
ttCCCGCGCCGTGTGGTGGTTTTTATAAATTTAAATTCAATCCGCCGAAAGTATAAGCAAACGACGAC‑GTTACCGGTGAAGAACTGACTACCCGTAAAGACGATCAGGAAGAGACCGTACGTAAACGTCTGGTTGAAt < 1:403818/138‑1 (MQ=255)
ttCACGCGCCGTCTGGTCGTTTTTATCCCGTTAAATTCAAACCGACCAAAGTAGAAGCAAAAGACGAC‑GTTACCGGTGAAGAACTGACTACCCGTAAAGACGATCAGGAAGAGACCGTACGTAAACGTCTGGTTGAAt < 5:157569/138‑1 (MQ=255)
ttCACGCGCCGGCTGGTCTTGTATATCAAGTTAAATTCAATCCGCCTAAAGTAGTATGAAAACACGAC‑GTTACCGGTGAAGAACTGACTACCCGTAAAGACCATCATGAAGAGACCGTACGTAAACGTCTGGTTGAAt < 6:934297/138‑1 (MQ=255)
aggcgcCGTTATGTCGTGTTTATCTCGTTAAATTCTATCCGCCGAACGTAGAGGGCAACGACGAC‑GTTACCGGGGAAGAACTGACTACCCGTAAAGTCGATCAGGAAGAGACCGTACGTAATCGTCTGGTTGAATACCAt < 4:77455/138‑1 (MQ=255)
gcgcGGTCTGGGTGTGTTATTTACGTTAAATTCAATCTGCCGACAGTAGACGGCAAAGACGAC‑GGTAGCGGGGAATAACTGACTACCCGTAAAGACGAGCAGGAAGATACCGTACGTAAACGTCTGGTTGAATACCATCa < 4:112302/140‑1 (MQ=255)
gcgcCGTCTGGGCGTGTTTATCACGTTAAATTCAATCCGCCGAAATTATAAGGAAAAGACGAC‑GTTACCGGTGAAGAACTGACTACCCGTAAAGACGATCAGGAAGAGACCGTACGTAAACGTCTGGTTGAATACCATCa < 4:1127530/140‑1 (MQ=255)
gcgcCGTCTGGGCGTGTTTATCACGTTAAATTAAATCCGCCTAAAGTATACGGAAAAGACGAC‑GTTACCGGTGAAGAACTGACTACCCGTAAAGACGATCAGGAAGAGACCGTACGTAAACGTCTGGTTGAATACCAt < 6:193000/138‑1 (MQ=255)
gcgcCGGCTGGTCGTGTTTATCACGTTAAATACAATCCCCCTAAAGTACACGGCAACGACGAC‑GTTACCGGTGAAGAACTGACTCCCCGTAAAGACGATCAGGAAGAGACCGTACGTAAACGTCTGGTTGAATACCAt < 1:957576/138‑1 (MQ=255)
ccGTCTGGTCGTTTTTATCACGTTAAATTAAATCCGCCTAAAGTATAAGGCAAAGACGAC‑GTTACCGGTGAAGAACTGACTACCCGTAAAGACGATCAGGAAGAGACCGTACGTAAACGTCTGGTTGAATACCATCAGAt < 3:971614/140‑1 (MQ=255)
ccGTCTGGTCGTGTTTAACACTTTAATTTCAATCCGCCTAAAGTTCAAGGCAATGACGAC‑GTTACCGGTGAAGAACTGACTACCCGTAAAGACGATCAGGAAGAGACCGTACGTAAACGTCTGGTTGAATACCATCAg < 1:74131/138‑1 (MQ=255)
cGTCTGGTCGTGTTTATCACGTTAAATTCAATCCCGCGAAAGTAGATGGCCAAGACGAC‑GTTACCGGTGAAGACCTGACTAGCCGAAATGACCATCAGGAATAGACCGTACGTAATAGTCTGGTTGATAACCATAAGATg > 8:346006/1‑140 (MQ=255)
gtttGGTCTTGTTTATCACTTTAAATTAATTCCGCCGAATTTAGATGCCAAAGACGAC‑GTTACCGGTGAAGAACTGACTACCCGTAAAGACGATCAGGAAGAGACCGTACGTAAACGTCTGGTTGAATACCATCAGATGa < 7:364544/137‑1 (MQ=255)
tCGTGTTAATCACGTTAAATTCAATCCGCCGAAAGTAGAAGGCAAACACGAC‑GTTACCGGTGAAGAACTGACTACCCGTAAAGACGATCAGGAAGAGACCGTACGTAAACGTCTGGTTGAATACCATCAGATGACTGCAc < 7:1006986/140‑1 (MQ=255)
gtttttAACAAGTTAAATTCAATCCGCCGAAAGAAGAATGAAACGACGAC‑GTTACAGGTGAAGCACTGACTACCCGTAAAGACGATCAGGAAGAGACCGTACGTAAACGTCTGGTTGAATACCATCAGATGACTGCACCg < 3:1041232/137‑1 (MQ=255)
tttATCACGTTAAATTCAATCCGCCGAAAGTAGAAGGCAAAGACGAC‑GTTACCGGTGAAGAACTGACTACCCGTAAAGACGATCAGGAAGAGACCGTACGTAAACGTCTGGTTGAAAACCATCAGATGACTGCACCGCTg > 8:876409/1‑140 (MQ=255)
ttctCACGTTAAATTCAAGCCGCCGAACGTAGAACCCAAAGACGAC‑GGTACCGGTGAAGAACTGACTACCCGTAAAGACGATCAGGAAGAGACCGTACGTAAACGTCTGGTTGAATACCATCAGATGACTGCACCGCTGa < 7:445144/137‑1 (MQ=255)
ttATCAGTTTAAATTAAATCCGCCCAAATTACAACGAAAAGACGAC‑GTTACCGGTGAAGAACTGACTACCCGTAAAGACGATCAGGAAGAGACCGTACGTAAACGTCTGGTTGAATACCATCAGATGACTGCACCGCt < 5:1124319/138‑1 (MQ=255)
ttAGCACGTTAAATTCACTCCGCCGAAAGTAGAAGCCAAAGACGAC‑GTTACCGGTGAAGAACTGACTACCCGTAAAGACGATCAGGAAGAGACCGTACGTAAACGTCTGGTTGAATACCATCAGATGACTGCACCGCt < 5:263198/138‑1 (MQ=255)
aaccctttAAATCCAATCCGCCGAACTTAGAAGTCAAAGACGAC‑GTTACCGGTGAAGAACTGCCTACCCGTAAAGACGAGCAGGCAGAGACCGTACGTAAACGTCTGGTTGAATACCATCAGATGACTGCACCGCTGATc < 8:728699/134‑1 (MQ=255)
aTCCCGTTAAATTCACTCCCCCGAAAGTAGAAGGCAAAGACGAC‑GTTACCGGTGAAGAACTGACTACCCGTAAAGACGATCAGGAAGAGACCGTACGTAAACGTCTGGTTGAATACCATCAGATGACTGCACCGCTGa < 5:1153307/138‑1 (MQ=255)
gTTAAATTCAATCCGCCGAAAGTAGAAGGCAAAGACGAC‑GTTACCGGTGAAGAACTGACTACCCGTAAAGACGATCAGGAAGAGACCGTACGTAAACGTCTGGTTGAATACCATCAGATGACTGCACCGCTGATCGGcta > 3:922512/1‑140 (MQ=255)
ttAAATTCAATCCGCCGAAAGTAGAAGGCAAAGACGAC‑GTTACCGGTGAAGAACTGACTACCCGTAAAGACGATCAGGAAGAGACCGTACGTAAACGTCTGGTTGAATACCATCAGATGACTGCACCGCTGATCGGctac > 4:197997/1‑140 (MQ=255)
aaTTCAATCCGCCGAAAGTAGAAGGCAAAGACGAC‑GTTACCGGTGAAGAACTGACTACCCGTAAAGATGATCAGGAAGAGACCGTACGTAAACGTCTGTTTGAATACCATCAGAGGACTGCACCGCTGATCGGctagg > 1:800600/1‑136 (MQ=255)
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AGGCAGACGCGATGAAAGAAGCGGGCATCAATGTTGATTACGTTCTGGAATTCGACGTACCGGACGAACTGATTGTTGACCGTATCGTAGGCCGCCGCGTTCACGCGCCGTCTGGTCGTGTTTATCACGTTAAATTCAATCCGCCGAAAGTAGAAGGCAAAGACGAC‑GTTACCGGTGAAGAACTGACTACCCGTAAAGACGATCAGGAAGAGACCGTACGTAAACGTCTGGTTGAATACCATCAGATGACTGCACCGCTGATCGGCTACT > NZ_CP022686/4056826‑4057095
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| Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
N/A
