Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A15 F13 I0 R1
|
284 |
16785.3 |
10492142 |
98.3% |
10313775 |
134.5 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
freq |
annotation |
gene |
description |
| RA |
NZ_CP022686 |
4,056,962 |
C→A |
16.2% |
F137L (TTC→TTA) |
adk → |
adenylate kinase |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NZ_CP022686 | 4,056,962 | 0 | C | A | 16.2%
| 290.9
/ 12.2
| 194 | F137L (TTC→TTA) | adk | adenylate kinase |
| Reads supporting (aligned to +/- strand): ref base C (25/122); new base A (25/15); total (57/137) |
| Fisher's exact test for biased strand distribution p-value = 5.45e-08 |
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 |
Only 100 of 195 total aligned reads displayed.
AGGCAGACGCGATGAAAGAAGCGGGCATCAATGTTGATTACGTTCTGGAATTCGACGTACCGGACGAACTGATTGTTGACCGTATCGTAGGCCGCCGCGTTCACGCGCCGTCTGGTCGTGTTTATCACGTTAAATTCAATCCGCCGAAAGTAGAAGGCAAAGACGACG‑TTACCGGTGAAGAACTGACTACCCGTAAAGACGATCAGGAAGAGACCGTACGTAAACGTCTGGTTGAATACCATCAGATGACTGCACCGCTGATCGGCTACT > NZ_CP022686/4056826‑4057095
|
cggcagACGCGATGAAAGAAGCGGGCATCAATGTTGATTACGTTCTGGAATTCGACGTACCGGACGAACTGATTGTTGACCGTATCGTAGGCCGCCGCGTTCACGCGCCGTCTGGTCGTGTTTATCACGTTAAATTCa < 7:286173/137‑1 (MQ=255)
aggcagACGCGATGAAAGAAGCGGGCAGCAATGTTGATTACGTTCTGGAATTCGACGTACCGGACGAACTGATTGTTGACCGTATCGTAGGCCGCCGCGTTCACGCGCCGTCTGGTCGTGTTTATCACGTTAAATTCa < 6:229207/138‑1 (MQ=255)
agACGCGATGAAAGAAGCGGGCATCAATGTTGATTACGTTCTGGAATTCGACGTACCGGACGAACTGATTGTTGACCGTATCGTAGGCCGCCGCGTTCACGCGCCGTCTGGTCGTGTTTATAACGTTTAATTAAATcc > 1:760300/1‑138 (MQ=255)
agACGCGATGAAAGAAGCGGGCATCAATGTTGATTACGTTCTGGAATTCGACGTACAGGACTAACTGATTGTTGACCGTATCGTAGGCCGCCGCGTTCACGCGCCGTCTGGTCGTGTTTTGCACGGTAAAATCaaaac > 2:874395/1‑135 (MQ=255)
gACGCGATGAAAGAAGCGGGCATCAATGTTGATTACGTTCTGGAATTCGACGTACCGGACGAACTGATTGTTGACCGTATCGTAGGCCGCCGCGTTCACGCGCCGTCTGGTCGTGTTTATCACGTTAAATTCAATccg < 8:1056693/138‑1 (MQ=255)
aCGCGATGAAAGAAGCGGGCATCAATGTTGATTACGTTCTGGAATTCGACGTACCGGACGAACTGATTGTTGACCGTATCGTAGGCCGCCGCGATCACGCGCCGTCTGGTCGTGTTGTTAACCTTATATTAAAAccgc > 7:536345/1‑138 (MQ=255)
cgcgATGAAAGAAGCGGGCATCAATGTTGATTACGTTCTGGAATTCGACGTACCGGACGAACTGATTGTTGACCGTATCGTAGGCCGCCGCGTTCACGCGCCGTCTGGTCGTGTTTATGACGTTAAATTAAATcagcc > 4:673744/1‑138 (MQ=255)
cgcgATGAAAGAAGCGGGCATCAATGTTGATTACGTTCTGGAATTCGACGTACCGGACGAACTGATTGTTGACCGTATCGTAGGCCGCCGCGTTCACGCGCCGTCTGGTCGTGTTTATCACGTTAAATTCAATccgcc < 3:427406/138‑1 (MQ=255)
cgcgATGAAAGAAGCGGGCATCAATGTTGACTACGTTCTGGAATTCGACGTACCGGACGAACTGATTGTTGACCGTATCGTAGGCCGCCGCGTTCACGCGCCGTCTGGTCGTGTTTATCACGTTAAATTCAATccgcc < 6:661113/138‑1 (MQ=255)
gAAAGAAGCGGGCATCAATGTTGATTACGTTCTGGAATTCGACGTACCGGACGAACTGATTGTTGACCGTATCGTAGGCCGCCGCGTTCACGCGCCGTCTGGTCGTGTTTATCACGTTAAATTCAATCCGCCGAAAGt < 2:190938/138‑1 (MQ=255)
gCGGGCATCAATGTTGATTACGTTCTGGAATTCGACGTACCGGACGAACTGATTGTTGACCGTATCGTAGGCCGCCGCGTTCACGCGCCGTCTGGTCGTGTTTATAACGTTAAATTAAATCCGCCCAAAGTAGAATGc > 2:634220/1‑138 (MQ=255)
gggCATCAATGTTGATTACGTTCTGGAATTCGACGTACCGGACGAACTGATTGTTGACCGTATCGTAGGCCGCCGCGTTCACGCGCCGTCTGGTCGTGTTTTTAACGTTAAATTCAAAACGCCGAAAATATAAGGCaa > 5:401231/1‑138 (MQ=255)
gggCATCAATGTTGATTACGTTCTGGAATTCGACGTACCGGACGAACTGATTGTTGACCGTATCGTAGGCCGCCGCGTTCACGCGCCGTCGGGTCGTGGTTATGACGGTAAATTCAATCCCCCGAAAGTAGAATGCaa > 3:1229720/1‑138 (MQ=255)
aTGTTGATTACGTTCTGGAATTCGACGTACCGGACGAACTGATTGTTGACCGTATCGTAGGCCGCCGCGTTCACGCGCCGTCTGGTCGTGTTTATCACGTTAAATTCAATCCGCCGAAAGTAGAAGGCAAAGacgacg > 6:867148/1‑138 (MQ=255)
ttttaTTACGTGCTGGAATTCGACGGACCGTACTAACTTATTGTTGACCGTATCGTAGGCCGCCGCGTGCCCGCGCCGTCTGGTCGTGTTTATCCGGTTAAATTCAATCCGCCGAAAGTAGAAGGCAACGACGACG‑tt < 6:910219/134‑1 (MQ=255)
gTTTATTAGGTTCTGGAATTCGACGTACCGGACTAACTGATTGTTGACCGTATCGTAGGCCGCCGCGTCCACGCGCCGGCTGGTCGTGTTTATCACTTTAAATTCAATCCGCCGAAATTAGAAGGCAAAGACGACG‑tt < 7:1130222/138‑1 (MQ=255)
gTTGATTACGTTCTGGAATTCGCCGAACCGTACGAACTGATTGTTGACCGTATCGTAGGCCGCCGCGTTCACGCGCCGTCTGGTCGTGTTTATCACGTTAAATTCAATCCGCCTAAAGTAGAAGGCAAAGACGACG‑tt < 4:583890/138‑1 (MQ=255)
gTTGATTACGTTCTGGAATTCGACGTACCGGACGAACTGATTTTTGACCGTATCGTAGGCCGCCGCGTTCACGCGCCGTCGGGTCGTGTTTATCACGTTAAATTCAATCCGCCGAAAGTAGAAGGCAAAGACGACG‑tt < 6:308311/138‑1 (MQ=255)
gTTGATTACGTTCTGGAATTCGACGTACCGGACGAACTGATTGTTGACCGTATCGTAGGCCGCCGCGTTCACGCGCCGTCTGGGCGTGTTTATCACGTTAAATTCAATCCGCCGAAATTAGACGGCAAAGACGACG‑tt < 6:482305/138‑1 (MQ=255)
ttaTTACGTTCTGGAATTCGACGTACCGGACGAACTGATTGTTGACCGTATCGTAGGCCGCCGCGTTCACGCGCCGTCTGGTCGTGTTTATCACGTTAAATTCAATCCGCCGAAAGTAGAAGGAAAAGACGACG‑TTAc < 5:283346/136‑1 (MQ=255)
gATTACGTTCTGGAATTCGACGTACCGGACGAACTGATTGTTGACCGTATCGTAGGCCGCCGCGTTCACGCGCCGTCTGGTCGTGGTTTTGACGGTAAATTAAATACGCCGAAACTAGAAGGCAAAGAAGACG‑TTAcc > 7:629052/1‑138 (MQ=255)
ttAGGTTCTGTAATTCGACGTACCGTACTAACTGATTGTTGACCGTAGCGTCGGCCGCCGCGTTCACGCGCCGTCTGGTCGTGTTTATCAGGTAAAATTCAATCCGCCGAACGTATAAGGCAAAGACGACG‑TTACCgg < 3:311293/138‑1 (MQ=255)
ttACGTTCTGTAAGTCGACGTACCGCCCGAAATTATTTTTCACCGTATCGTCGGCCGCCGCGTGCACGCGCCGGCTGGTCGTGTTTATCACGTTAAATTCAATCCGCCGAAAGTAGACGGCAACGACGACG‑TTACCgg < 4:102738/138‑1 (MQ=255)
tACGTTCTGGAATTCGACGTACCGGACGAACTGATTGTTGACCGTATCGTAGGCCGCCGCGTTCCCGCGCCGTCTGGTCGTGGTTATAACGTTTTATTCAATACGCCGAAAGTATAAATCAAAGACCACG‑TTAACggg > 7:127847/1‑137 (MQ=255)
tACGTTCTGGAATTCGACGTACCGGACGAACTGATTGTTGACCGTATCGTAGGCCGCCGCGTTCACGCGCCGTCTGGTCGTGTTTATCACGTTAAATTCAATccgcc > 4:708567/1‑107 (MQ=255)
tACGTTCTGGAATTCGACGTACCGGACGAACTGATTGTTGACCGTATCGTAGGCCGCCGCGTTCACGCGCCGTCTGGTCGTGTGTTTAACGTTTAATTAAAACAGGCGAAAGTATAATGCAACAACGACG‑TTGccagg > 5:658555/1‑135 (MQ=255)
ggTTCTGTAATTCGACGTACCGGACTAACTGATTGTTGACCGTATCGTAGGCCGCCGCGTTCACGCGCCGTCTGGTCGTGTTTATCACGTTAAATTCAATCCGCCGAAAGTAGAAGGAAAAGACGACG‑TTACCGGTga < 1:634220/137‑1 (MQ=255)
cGTTCTGGAATTCGACGTACCGGACGAACTGATTGTTGACCGTATCGTAGGCCGCCGCGTTCACGCGCCGTCTGGTCGTGTTTATCACGTTAAATTAAATCCGCCGAAAGGAGAAGGCAAAGACGACG‑GTTCCCGTgc > 2:447125/1‑137 (MQ=255)
ttCTGGAATTCGACGTACCGGACGAACTGATTGTTGACCGTATCGTAGGCCGCCGCGTTCACGCGCCGTCTGGTCGTGTTTATCACGTTAAATTCAATCCGCCGAAAGTAGAAGGCAAAGACGACG‑TTACCGGTgaag > 6:527964/1‑138 (MQ=255)
tCTGGAATTCGACGTACCGGACGAACTGATTGTTGACCGTATCGTAGGCCGCCGCGTTCACGCGCCGTCGGGTCGTGTTTATCAAGATTAATTGAATGCGCCGCAAGTAGCAGGCAAAGGCGCCG‑GTACCGGTgaagc > 6:1078382/1‑137 (MQ=255)
taaTTCGACGTACCGGACGAAGTTATTGTTGACCGTAGGGTAGGCCGCCGCGTTCAGGGGCGGTCTGGTCGTGTTTAGCACGTTAAATTCAATCCGCGTAAAGTAGACGGCAAAGACGACG‑TTACCGGTGAAGAACTg < 1:167585/137‑1 (MQ=255)
taaTTCGACGTACCGGACGAACTGATTGTTGACCGTATCGTAGGCCGCCGCGTTCACGCGCCGTCTGGTCGTGTTTATCACGTTAAATTCAATCCGCCGAAAGTAGAAGGCAAAGACGACG‑TTACCGGTGAAGAACTg < 2:1057803/137‑1 (MQ=255)
gAATGCGACGTCCCGGACGAACTGATTGTTGACCGTATCGTAGGCCGCCGCGTTCACGCGCCGTCTGGTCGTGTTTAACACGTTAAATTCAATCCCCCGAACGTAGAAGGCAAAGACGACG‑TTACCGGTGAAGAACTg < 6:965398/138‑1 (MQ=255)
aattgtaCGTACCGGACCAACTGATTGTTGACCGTCTCGTAGGCCGCCGCGTTCACGCGCCGTCGGGTCGGGTTTATCACGTTAAATTCAATCCGCCTAAAGTAGAAGGCAAAGACGACG‑TTACCGGTGAAGAACTGa < 6:810577/132‑1 (MQ=255)
aaatctaCGTACCGTCCGAACTGATTTTTTACCTTATCGTAGGCCGCCGCTTTCACTCGCCTTATGGTCTTGTTTAACACGTTAAATTCAATCCGCCGAAAGTAGAAGGAAAACACGACG‑TTACCGGTGAAGAACTGa < 2:816551/132‑1 (MQ=255)
gTACCGGACGAACTGATTGTTGACCGTATCGTAGGCCGCCGCGTTCACGCGCCGTCTGGTCGTGTTTATCACGTTAAATTCAATCCGCCGAAAGTAGAAGGCAAAGACGACG‑TTACCGGTGAAGAACTGACTACCCGt < 2:238664/138‑1 (MQ=255)
tACCGGACGAACTGATTGTTGACCGTATCGTAGGCCGCCGCGTTCACGCGCCGTCTGGTCGTGTTTATCACGTTAAATTCAATCCGCCTAAAGTAGAAGCCAAAGACGACG‑TTACCGGTGAAGAACTGACTACCCGTa < 5:527964/138‑1 (MQ=255)
tACCGGACGAACTGATTGTTGACCGTATCGTAGGCCGCCGCGTTCACGCGCCGTCTGGTCGTGTTTATCAAGTTAAATTCAATACGCCGAAAATATAAAGCAAAGACGACG‑TTACCCGTGAAGTACAGACTAacccaa > 6:115354/1‑135 (MQ=255)
ccGGACGAACTGATTGTTGACCGTATCGTAGGCCGCCGCGTTCACGCGCCGTCTGGTCGTGTTTATCACGTTAAATTCAATCCGCCGAAAGTAGACGGCAAAGACGACG‑TTACCGGTGAAGAACTGACTACCCGTaaa < 4:776175/138‑1 (MQ=255)
cGGACGAACTGATTGTTGACCGTATCGTAGGCCGCCGCGTTCACGCGCCGTCTGGTCGTGTTTTTGACGTTAAAATACATCCGCCGAAAGTATAAGGCAAACACGACG‑TTACCCGTGAAGAACAGACTACCCCTaaac > 5:803203/1‑137 (MQ=255)
cGGACGAACTGATTGTTGACCGTATCGTAGGCCGCCGCGTTCACGCGCCGTCTGGTCGTGTTTATAACGTTTAATTAAATCCGCCGAAAGTAGAAGGCAAAGACGACG‑TTACCGGTGTAGAACTGACTACCCGTaaat > 4:941867/1‑137 (MQ=255)
cGGACGAACTGATTGTTGACCGTATCGTAGGCCGCCGCGTTCACGCGCCGTCTGGTCGTGGTTATCACCTGAAATTCAATCCGCCGAAAGTAGAAGGCAAATCCGCCG‑GTACCGGTGAAGAACTTACTACCCCTaatc > 1:1173139/1‑136 (MQ=255)
ggACGAACTGATTGTTGACCGTATCGTAGGCCGCCGCGTTCACGCGCCGTCTGGTCGTGGTTATAACGTTAAATTAAATCCGCCGAAATTAGAAGGCAAAGACGACG‑TTACCGGGGCAGAACTGCATACCCGTTAAGa > 6:59480/1‑138 (MQ=255)
ccGAACTGCTTGTTGATCTTATGTTCGGACGCCGCTTGATCGCGCCGTCTGGGCGGTTTTATCACGTTAAATTCAATCCGCCGAAAGTAGTAGGCAAAGACGACG‑TTACCGGTGAAGAACTGACTACCCGTAAAGACg < 8:1129876/137‑1 (MQ=255)
ccGAACGGATTGGTGACGGGACCGCCGCCCGCGGCGGTCACGCGCCGGTTGGGCGTGTTTATCACGTTAAATCCAAACCGCCTAAAGTAGACGGCAAAGACGACG‑TTACCGGTGAAGAACTGACTACCCGTAAAGACg < 6:1284603/137‑1 (MQ=255)
actaaCTGATTGTTGACCGTATCGTTGGCCGCCGCTTTAACGCGCCGTGTGGTGGTTTTTATCACGTTAAATTCAATCCGCGGAAATTTCAAGGCAAAGACGACG‑TTACCGTTGAAGAACTGACTACCCGTAAAGACg < 2:697367/135‑1 (MQ=255)
aCGATCTTATTGTTCACCGTATCGTAGGCCGCCGCGTTAACGCGCCGTCTGGTCGTGTTTATCACGTAAAATTCACTCCGCCTAAAGTAGAAGGCAACGACGACG‑TTACCGGTGAAGAACTGACTACCCGTAacgacg < 5:711924/138‑1 (MQ=255)
aCGAACTGTTTGTTGACCGTATGGTAGGCCGCCGCTTTAACGCGCCGTCTGGTGGTGTTTATCACGTTAAATTAAATCCTCCTAAAGTATATGGCAAAGACGACG‑TTACCGGTGAAGAACTGACTACCCGTAAAGACg < 8:700746/138‑1 (MQ=255)
aCGAACTGATTTTTGACCTTATCGTTGGACGATTAGTACACGCGCTGTCTGGGCTTGTTTATCACGTTAAATTCGATCCGCCGAAAGTAGAAGGCAAAGACGTCG‑TTACCGGTGAAGAACTGACTACCCGTAAAGACg < 4:365377/138‑1 (MQ=255)
ctaaCTGATTGTTGACCGTATCGTCGGCCGCCGCGTTCACGCGCCGTCTGGTCGTGTTTATCACGTTAAATTCAATCCGCCTAAAGTAGAAGGCAAAGACGACG‑TTACCGGTGAAGAACTGACTACCCGTAAAGACGa < 8:827164/136‑1 (MQ=255)
cGAACTGATTGTTGACCGTATCGTAGGCCGCCGCGTTCACGCGCCGTCTGGTCGTGTTTTTCACGGTAAATTAAATCCGCCGAAAATAGAAGGCAAACACGACG‑TTAACCGTGAAGAACAGACTACCCGTAAATACGa > 3:573803/1‑138 (MQ=255)
aaCTGATTGTTGACCGTATCGTAGGCCGCCGCGTTCACGCGCCGTCTGGTCGTGTTTATCACGTTAAATTCAATCCGCCGAAAGTAGAAGGCAAAGACGACG‑TTACCGGTGAAGAACTGACTACCCGTAAAGACGATc < 6:357261/138‑1 (MQ=255)
tGATTGTTGACCGTATCGTAGGCCGCCGCGTTCACGCGCCGGCTGGTCGTGTTTATCAAGTTAAATTGAATCCGCCGAAAATAGAAGGCAAAGACGCCG‑GTACCGGTGTAGATCTGACTACCCGTAAAGACGATCAgg > 3:481121/1‑138 (MQ=255)
ggATGGTTGACCGTATCGTCGGCCGCCGCGTTCACGCGCCGGGTGGTCGTGTTTATCACGTTAAATTCAATCCGCCGTAATTAGAAGGCAAAGACGACG‑TTACCGGTGAAGAACTGACTACCAGTAAAGACGATCAgg < 3:840012/137‑1 (MQ=255)
tttgttgACCGTTTCGTTGGCCGCCGCTTTCACGCGCCGTCTGGTCGTTTTTAGACCGTTAAATTCAATCCGCCGAAAGTAGAAGGCAAAGACGACG‑TTACCGGTGAAGAACTGACTACCCGTAAAGACGATCAGGaa < 5:1286605/137‑1 (MQ=255)
tgttgACCGTATCGTAGGCCGCCGCGTTCACGCGCCGTCTGGTCGTGTTTATCACGTTAAATTCAATCCGCCGAAATTAGAAGGCAAAGACGACG‑TTACCGGTGAAGAACTGACTACCCGTAAAGACGATCAGGAaga < 2:725621/138‑1 (MQ=255)
ttgACCGTATCGTAGTCGGCGGCGTTAACGCGCCGTCTGGTCGTGTTTATCACTTTAATTTCATTCCGCCTAAAGTTGTAGGCTAAGACGAGT‑GTACCGGTGAAGAACTGACTACCCGTAAAGACGATCAGGAAgaga < 8:1002603/138‑1 (MQ=255)
tgACCGTATCGTAGGCCGCCGCGTTCCCGCGCCGTCTGGTCGTGTTTATCACGTAAAATTCAATCCGCCTAAAGTAGAAGCAAACCACGACG‑TTACCGGTGAAGAACTGACTACCCGTAAAGACGATCAGGAAGAGAc < 2:1207428/138‑1 (MQ=255)
aTCGTAGGCCGCCGCGTTCACTCGCCGTCATGTCGTGTTTTTCACGTTAAATTAAATACGCCGAAAATAGAAGGAAAACAAGACA‑TTAACGCTTAATAAATGCAGACCCGAAAAGAACAACAGAAAAAGACcgtaact > 4:321615/1‑135 (MQ=255)
aTCGTAGGCCGCCGCGTTCACGCGCCGTCTGGTCGTGTTTATGACGTTAAATTCAATACGCCGAAAGTATAAGGCAAAGACGACG‑TTACCGGGGAAGAACTGACTACCCGTAAAGAAGATCAGGAAGAGACcggtcgg > 2:748213/1‑133 (MQ=255)
tCGTAGGCCGCCGCGTTCACGCGCCGTCTGGTCGTGTTAATGAAGGGTAATAAAAACCGCCCGAAATATAACGCCAAGCCGTCG‑GTTCCCGGGCATAACAGACAACCCCGAAACACGATCAGTAAGAGCAcgtacgat > 2:1320610/1‑136 (MQ=255)
agTAGGCCGCCGCGTTCACTAGACGTCAGGTCGTGTTTATCACGTTAAAATAAATCCGCCGAAATTAGAACGCAATGACGACG‑TTTACGGTTAATAAATGACTACCCGTAAAAAATATCAGTAAGAATACgtaagtaa > 4:1187695/2‑138 (MQ=255)
tAGGCCGCCGCGTTCACGCGCCGTGTGGGCGTTTTTATCACGTTAAATTAAATCCGCCCAAAGTAGACGGCAACGACGACG‑TTACCGGTGAAGAACTGACTACCCGTAAAGACGATCAGGAAGAGACCGTACGTAAAc < 1:1319597/138‑1 (MQ=255)
tggCCGCCGCGTTCAGGCGCCGTCTGGTCGTGTTAATCACTTTAAATTCAATCCGCCCAATTTACAAGGCAAAGACGACG‑TTACCGGTGAAGAACTGACTACCCGTAAAGACGATCAGGAAGAGACCGTACGTAAACg < 8:1179987/137‑1 (MQ=255)
ggCCGCCGCGTTCACGCGCCGTCTGGTGGTTTTTATCACGTTAAATTCAATCCGCCTAAAGTAGAAGCCAAAGACGACG‑TTACCGGTGAAGAACTGACTACCCGTAAAGACGATCAGGAAGAGACCGTACGTAAACGt < 7:703448/138‑1 (MQ=255)
ccgccgCTTTCACGCGCAGTCTGGTCGTTTTTATCACTTTAAATTAAATCCGCCGAAAGTACAAGTCAACGACGACG‑TTACCGGTGAAGAACTGACTACCCGTAAAGACTATCAGGAAGAGACCGTACGTAAACGTCt < 3:1076866/138‑1 (MQ=255)
ccgccgCGTTCACGCGCCGTCTGGTCGTGTTTTTAACGTTAAATTCAATACGCCGCAAGTAGAAGGCAAATACGACG‑TTTCCGGTGATGAACTGACTACCCGTAAAGACGCTTAGGAAGAGACCGTACGTAAACgggt > 7:1040748/1‑135 (MQ=255)
ccgcGTTCACGCGCCGTCTGGTCGTGTTTATGACCGTAAAATAAAAAAGCCCAAAGTTGAATGGAAAGACGAAGTTTACCGG‑GAAGAACAGGCAACCCCTCAAGACGCTCAGGAAGAGAACCTACCTAAACGTCTTGt > 6:999541/1‑138 (MQ=255)
cgcgTTCACGCGCCGTCTGGGCGTGTTTATCACGTTAAATTCAATCCGCCGAAAGTAGAAGGAAAAGACGACG‑TTACCGGTGAAGAACTGACTACCCGTAAAGACGATCAGGAAGAGACCGTACGTAAACGTCTGGtt < 8:1089012/138‑1 (MQ=255)
gctttCCCGCGCCGTCTGGTCGTGTTTAACCCTTAAAATTCAATCCGCCGAATGTAGAAGCCAAAGACGACG‑TTACCGGTGAAGAACTGACTACCCGTAAAGACGATCAGGAAGAGACCGTACGTAAACGTCTGGTTg < 4:1119439/135‑1 (MQ=255)
gctgtCACGCGCCGTCTGGTCGTGTTTATCACGTTAAATTCATTCCGCCGAAAGTAGAAGGAAAAGACGACG‑TTACCGGTGAAGAACTGACTACCCGTAAAGACGATCAGGAAGAGACCGTACGTAAACGTCTGGTTg < 6:726584/134‑1 (MQ=255)
gcgTTCACGCGCCGTCTGGTCGTGTTTTTCACGTTAAATTAAATACGCCGAAAGTAGAAGGCAAAGACGACG‑TTACCGGTGAAGCACTGACTACCCGTAAAGACGATCAGGAAGAGCCCGTAAGTAAACGTCTGGTTg > 6:435554/1‑138 (MQ=255)
gcgTTCACGCGCCGTCTGGTCGTGTTTATCAGGTTAAAATCAATACTCCGAATGTTGATGGCAAAGACGACG‑TTACCGGTGAAGAACTGACTACCCGTAAAGACAATCAGGAAGAGACCGTACGTAAACGTCTGGTTg < 5:187384/138‑1 (MQ=255)
gcgTTCACGCGCCGTCTGGTCGTGTTTATCACGTTAAATTAAATCCGCCGAAAGTAGAAGGCAAAGACGACG‑TTACCGGTGAAGAACTGACTACCCGTAAAGACGATGAGGAAGAGACCGTACGTTAACGTCTGGTTg > 3:905239/1‑138 (MQ=255)
gcgTTCACGCGCCGTCTGGTCGTGTTTATCACGGTAAATTAAATCCGCCGAAAGTAGAAGGCAAAGCCGACG‑TTACCGGTTAAGAACTGACTACCCGTAAAGACGATCAGGAAGAGACCGTTCGTAAACGTCTGGTTg > 4:332637/1‑138 (MQ=255)
gcgTTCACGCGCCGTCTGGTCGTGGTTATCACGTTAAATTCAATCCGCCGAAAGTAGAAGGCAAAGACGACG‑TTTCCGGTGAAGAACTGACGACCCGTAAATACGCTCAAGAAGAGACCGTACGTAAACGTCTGGTTg > 2:557590/1‑138 (MQ=255)
ggTTCACGCGCCGTCGGGTCGTGTTTATCACGTTAAATTCAATCCTCCGAAAGTAGAAGTCAAAGACGACG‑TTACCGGTGAAGAACTGACTACCCGTAAAGACGATCAGGAAGAGACCGTACGTAAACGTCTGGTTGa < 7:442002/137‑1 (MQ=255)
ttCACGCGCCGGCTGGGGGTGTTTAGAACGTTAAATTCAATCCGCCTAACTTTGTAGGCAATGACGACG‑TTACCGGTGAAGAACTGACTACCCGTAAAGACGATCAGGAAGAGACCGTACGTAAACGTCTGGTTGAAt < 6:126062/138‑1 (MQ=255)
ccgcgCCGTCTGGTCGTGTATATCAGGTTAAATTCAATCCGCCTAAATTCGAAGCAAACGACGACG‑TTACCGGTGAAGAACTGACTACCCGTAAAGACGATCAGGAAGAGACCGTACGTAAACGTCTGGTTGAATAcc < 7:264825/137‑1 (MQ=255)
gcgcGGGCTGGTCGTGTTTATCACGTAAAATTCAATCCGCCGAAAGTAGACGGCAAAGACGACG‑TTACCGGTGAAGAACTGACTACCCGTAAAGACGATCAGGAAGAGACCGTACGTAAACGTCTGGTTGAATACCAt < 4:222817/138‑1 (MQ=255)
gcgcCGTCGGGTCGTGTTTATCACGTTAAATTCAATCCGCCGAAAGTCGACGGCAAAGACGACG‑TTACCGGTGAAGAACTGACTACCCGTAAAGACGATCAGGAAGAGACCGTACGTAAACGTCTGGTTGAATACCAt < 2:1019395/138‑1 (MQ=255)
ccGTCTGGTCGTGTTTATCACGTTAAATTCAATCCGCCGAAAGTATAAGGCAAAGACGACG‑TTACCGGTGAAGAACTGACTACCCGTAAAGACGATCAGGAAGAGACCGTACGTAAACGTCTGGTTGAATACCATCAg < 4:549420/138‑1 (MQ=255)
ccGTCTGGGCGTTTTTATCACGTTAAATTCAATCCGCCGAAAGTAGAAGCCAAAGACGACG‑TTACCGGTGAAGAACTGACTACCCGTAAAGACGATCAGGAAGAGACCGTACGTAAACGTCTGGTTGAATACCATCAg < 3:1008696/138‑1 (MQ=255)
ccGTCGGGCCGTGTTTCTACCGTTAAATTCAATCCCCCGAAAGTAGAAGGCAAAGACGACG‑TTACCGGTGAAGAACTGACTACCCGTAAAGACGATCAGGAAGAGACCGTACGTAAACGTCTGGTTGAATACCATCAg < 8:64557/138‑1 (MQ=255)
tGGTCTTGTTTATCAGTTTAAATTCAATCCGCCGAATGAAGATGGCAAAGACGACG‑TTACCGGTGAAGAACTGACTACCCGTAAAGACGATCAGGAAGAGACCGTACGTAAACGTCTGGTTGAATACCATCAGATGAc < 1:214361/138‑1 (MQ=255)
tGGTCGTGTTTATCCCTTTAAATTCAATCCGCCTAAAGTAGAAGGCAAAGACGACG‑TTACCGGTGAAGAACTGACTACCCGTAAAGACGATCAGGAAGAGACCGTACGTAAACGTCTGGTTGAATACCATCAGATGAc < 2:396193/138‑1 (MQ=255)
tGGTCGTGTTTATAACGTTAAATTAAATCCGCCGAAAGTAGAAGGCAAAGACGACG‑TTACCGGTGAAGAACTGACTACCCGTAAAGACGATCAGGAAGAGACCGTACGTAAACGTCTGGTTGAATACCATCAGATGAc > 8:599914/1‑138 (MQ=255)
tCGTGTTTATCACGTTAAATTCAATCCGCCTAAAGTAGAAGGCAAAGACGACG‑TTACCGGTGAAGAACTGACTACCCGTAAAGACGATCAGGAAGAGACCGTACGTAAACGTCTGGTTGAATACCATCAGATGACTGc < 7:1242369/138‑1 (MQ=255)
tgtTTATCACGTTAAATTGAATCCGCCGAAAATAGAAGGCAAAGACCACG‑TTAACGGTGAAGAACTGACTAACCGGAAATACGATCAGGCACAGACCGTAAGGAAACGTAGGCTTGAATAACAACAGATGACTGcccc > 4:397261/1‑138 (MQ=255)
tttATCACCTTAAAATAACTCCCCCGAAAGTAGAAGGCAAATACGACG‑TTACCCGTGAAGAACTGACTACCCGTAAAGACGATCAGGAAGAGACCGTAAGTAAACGTCTGGTTTAATACCATAACATTACTGCACCGc > 4:1299061/1‑138 (MQ=255)
ttATCACGTAAAATTCAATCCGCCGAAAGTAGAAGGCAAAGACGACG‑TTACCGGTGAAGAACTGACTACCCGTAAAGACGATCAGGAAGAGACCGTACGTAAACGTCTGGTTGAATACCATCAGATGACTGCACCGCt < 8:431306/138‑1 (MQ=255)
ttATCAAGTTAAATTCAATCCCCCGAATGTAGACGCCAACGACGACG‑TTACCGGTGAAGAACTGACTACCCGTAAAGACGATCAGGAAGAGACCGTACGTAAACGTCTGGTTGAATACCATCAGATGACTGCACCGCt < 6:79377/138‑1 (MQ=255)
taaTCACGTTAAATTCAATCCGCCCAAAGGAGAAGGCAAAGACGACG‑TTACCGGTGAAGAACGGACTACCCGTAAAGACGATCAGGAAGAGACCGTACGTAAACGTCTGGGTGAATACCATCAGATGCCTGCACCGCt < 8:1113737/136‑1 (MQ=255)
ttCACGTTAAATTCAATCCGCCCAAATTAGATGGCAAAGACGACG‑TTACCGGTGAAGAACTGACTACCCGTAAAGACGATCAGGAAGAGACCGTACGTAAACGTCTGGTTGAATACCATCAGATGACTGCACCGCTGa < 8:212950/137‑1 (MQ=255)
aTCACGTTAAATTCAATCCGCCGAAAGTAGAAGGCAAAGACGACG‑TTACCGGTGAAGAACTGACTACCCGTAAAGACGATCAGGAAGAGACCGTACGTAAACGTCTGGTTGAATACCATCAGATGACTGCACCGCTGa < 3:1258730/138‑1 (MQ=255)
tttAAATTCAAACCGCCAAAAGTATAAGGAAAAGACGACG‑TTAACGGTGAATAACTTACTACACTTAAAGACTATCAGCAAGAGACCGTACGTAAACGTCTGGTTGAATACCATCATATGACTGCACCGCTGATCGGc < 6:646649/137‑1 (MQ=255)
ttaaaaTGCAATCCGCCGAACGTAGACGCCAAAGACGACG‑TTACCGGTGAAGAACTGACTACCCGTAAAGACGATCAGGAAGAGACCGTACGTAAACGTCTGGTTGAATACCATCAGATGACTGCACCGCTGATCGGc < 1:892552/135‑1 (MQ=255)
gTTAAATTAAACCCCCCTAAAGTAGAAGGCAAACACGACG‑TTACCGGTGAAGAACTGACTACCCGTAAAGACGATCAGGAAGAGACCGTACGTAAACGTCTGGTTGAATACCATCAGATGACTGCACCGCTGATCGGc < 1:434618/138‑1 (MQ=255)
ttAAATTCAATCCGCCTAAAGTAGAAGGCAAACACGACG‑TTACCGGTGAAGAACTGACTACCCGTAAAGACGATCAGGAAGAGACCGTACGTAAACGTCTGGTTGAATACCATCAGATGACTGCACCGCTGATCGGct < 3:664877/138‑1 (MQ=255)
aaTTCAATCCGCCGAAAGTAGAAGGCAAAGACGACG‑TTACCGGTGAAGAACTGACTACCCGTAAAGACGCTCAGGAAGAGACCGTACGTAAACGTCTGGTTGAATACAATCAGATGACTGCACCGCTGATCGGctact > 1:1003534/1‑138 (MQ=255)
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AGGCAGACGCGATGAAAGAAGCGGGCATCAATGTTGATTACGTTCTGGAATTCGACGTACCGGACGAACTGATTGTTGACCGTATCGTAGGCCGCCGCGTTCACGCGCCGTCTGGTCGTGTTTATCACGTTAAATTCAATCCGCCGAAAGTAGAAGGCAAAGACGACG‑TTACCGGTGAAGAACTGACTACCCGTAAAGACGATCAGGAAGAGACCGTACGTAAACGTCTGGTTGAATACCATCAGATGACTGCACCGCTGATCGGCTACT > NZ_CP022686/4056826‑4057095
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| Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
N/A
