Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A13 F13 I0 R1
|
168 |
14435.1 |
8204878 |
98.4% |
8073599 |
135.2 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
freq |
annotation |
gene |
description |
| RA |
NZ_CP022686 |
4,056,962 |
C→A |
15.7% |
F137L (TTC→TTA) |
adk → |
adenylate kinase |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NZ_CP022686 | 4,056,962 | 0 | C | A | 15.7%
| 162.4
/ 2.9
| 105 | F137L (TTC→TTA) | adk | adenylate kinase |
| Reads supporting (aligned to +/- strand): ref base C (21/59); new base A (16/4); total (42/63) |
| Fisher's exact test for biased strand distribution p-value = 1.56e-05 |
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 |
Only 100 of 107 total aligned reads displayed.
GGCAGACGCGATGAAAGAAGCGGGCATCAATGTTGATTACGTTCTGGAATTCGACGTACCGGACGAACTGATTGTTGACCGTATCGTAGGCCGCCGCGTTCACGCGCCGTCTGGTCGTGTTTATCACGTTAAATTCAATCCGCCGAAAGTAGAAGGCAAAGACGACGTTACCGGTGAAGAACTGACTACCCGTAAAGACGATCAGGAAGAGACCGTACGTAAACGTCTGGTTGAATACCATCAGATGACTGCACCGCTGATCGGCTACTACT > NZ_CP022686/4056827‑4057098
|
ggcagACGCGATGAAAGAAGCGGGCATCAATGTTGATTACGTTCTGGAATTCGACGTACCGGACGAACTGATTGTTGACCGTATCGTAGGCCGCCGCGTTCACGCGCCGTCTGGTCGTGGTTATAACGttaaattaaa > 4:82425/1‑138 (MQ=255)
agACGCGATGAAAGAAGCGGGCATCAATGTTGATTACGTTCTGGAATTCGACGTACCGGACGAACTGATTGTTGACCGTATCGTAGGCCGCCGCGTTCACGCGCCGTCTGGTCGTGTTTATCACGTTAAATTAAATcc > 2:5399/1‑138 (MQ=255)
gACGCGATGAAAGAAGCGGGCATCAATGTTGATTACGTTCTGGAATTCGACGTACCCGACGAACTGATTGTTGACCGTATCGTAGGCCGCCGCGTTCACGCGCCGTCTGGTCGTGTTTATAACGTTAAATTCCAtacacc > 7:434925/1‑135 (MQ=255)
cgcgATGAAAGAATCGGGCATCATTGTTGATTTCGTTCTGGAATTCGACGTACCGGACGAACTGATTGTTGACCGTATCGTAGGCCGCCGCGTTCACGCGCCGTCTGGTCGTGTTTATCACGTTAAATTCAATccgcc < 4:280235/138‑1 (MQ=255)
cgcgATGAAAGAAGCGGGCATCAATGTTGATTACGTTCTGGAATTCGACGTACCGGACGAACTGATTGTTGACCGTATCGTAGGCCGCCGCGTTCACGCGCCGTCTGGTCGTGTTTATCACGTTAAATTCAATccgcc < 1:477738/138‑1 (MQ=255)
cgcgATGAAAGAAGCGGGCATCAATGTTGATTACGTTCTGGAATTCGACGTACCGGACGAACTGATTGTTGACCGTATCGTAGGCCGCCGCGTTCACGCGCCGTCTGGTCGTGTTTATCACGTTAAATTCAATccgcc < 4:906113/138‑1 (MQ=255)
cgcgATGAAAGAAGCGGGCATCAATGTTGATTACGTTCTGGAATTCGACGTACCGGACGAACTGATTGTTGACCGTATCGTAGGCCGCCGCGTTCACGCGCCGTCTGGTCGTGTTTATCACGTTAAATTCAATCCGCCGa < 7:744381/140‑1 (MQ=255)
tGAAAGAAGCGGGCATCAATGTTGATTACGTTCTGGAATTCGACGTACCGGACGAACTGATTGTTGACCGTATCGTAGGCCGCCGCGTTCACGCGCCGTCTGGTCGTGTTTATCACGTTAAATTCAATCCGCCGAAAg < 3:483392/138‑1 (MQ=255)
taaaGTAGCGGGCATCAATGTTGATTACGTTCTGTAATTCGACGTACCGGACGAACTGATTGTTGACCGTATCGTAGGCCGCCGCGTTCACGCGCCGTCTGGTCGTGTTTATCACGTTAAATTCAATCCGCCGAAAGTAg < 8:831016/139‑1 (MQ=255)
gAAAGAAGCGGGCATCAATGTTGATTACGTTCTGGAATTCGACGTACCGGACGAACTGATTGTTGACCGTATCGTAGGCCGCCGCGTTCACGCGCCGTCTGGTCGTGTTTATCACGTTAAATTCAATCCGCCGAAAGTAg < 6:509038/140‑1 (MQ=255)
gAAAGAAGCGGGCATCAATGTTGATTACGTTCTGGAATTCGACGTACCGGACGAACTGATTGTTGACCGTATCGTAGGCCGCCGCGTTCACGCGCCGTCTGGTCGTGGTTATCACGTTAAATTCAATCCGCCGAAAGt < 3:84219/138‑1 (MQ=255)
agaagCGGGAATCAATGTTGATTACGTTCTGGAATTCGACGTACCGGACGAACTTATTGTTGACCGTATCGTAGGCCGCCGCGTTCACGCGCCGTCTGGTCGTGTTTATCACGTTAAATTCAATCCGCCGAAAGTAGa < 3:967368/138‑1 (MQ=255)
cGGTCATCAATTTTGATTACGTTATTGATTTCGACTTACGGTACGAAATTATTGTTGACCGTATCGTAGGCCGCCGCGTTAACTCGCCGTCTGGTCGTGTTTATCACGTTAATTTCAATCCGCCTAAATTAGAAGGCaaa < 8:589166/140‑1 (MQ=255)
aaTGTTGATTACTTTCTGGAATTCGACGTACGTTACTAACTGATTGTTGACCTTATCGTAGGCCGCCGCGTTCAGGGGCCGTCTGGGCGTGTTTATCAGTTTAAATTCAATCCGCCTAAAGTAGAAGGCAAAGACGACGt < 5:986017/140‑1 (MQ=255)
tttttttACGTTCTGGAATTCGACGAACCGGACTAACTGATTGTTGACCGTATCGTAGGCCGCCGCGTTCACGCGCCGTCTGGTCGTTTTTATCACGTTAAATTCAATCCGCCGAAAGTAGACGGCAAAGACGACGtt < 2:1056112/133‑1 (MQ=255)
tttGATTTCGTTCTTTAATTGGCCGTACCGGACGAACTGATTGTTTACCGTATCGTAGGCCGCCGCTTTCACGCGCCGTCTGGTCGTTTTTATCACGTTAAATTCAATCCGCCGAAAGTATAAGGCAAAGACGACGtt < 4:710360/137‑1 (MQ=255)
tttGATTCCGTTCTGGAATTCGACGAACCGGACGAACTGATTGTTGACCGTATCTTTGGCCGCCGCGTTCACGCGCCGTCTGGTCGTGTTTATCACTTAAAATTCAATCCGCCGAAAGTAGAAGGCAAAGACGACGTTAc < 5:322448/139‑1 (MQ=255)
tttGATTACTTTCTGTAATTCGACGTACCGGACGAACTGATTGTTGACCGTATCGTAGGCCGCCGCGGTCACGCGCCGTCTGGTCGTGTTTATCACGTTAAATTCAATCCGCCTAAAGTAGAAGGCAAAGACGACGtt < 3:567440/137‑1 (MQ=255)
gTTGATTACGTTCTGTAATTCGACGAACCGGACGAACTGATTGTTGACCGTATCGTAGGCCGCCGCGTTCACGCGCCGTCTGGTCGTTTTTATCACGTTAAATTCAATCCGCCGAAAGTAGAAGGCAAAGACGACGtt < 1:9800/138‑1 (MQ=255)
gTTGATTACGTTCTGGAATTCGACGTACCGGACGAACTGATTGTTGACCGTATCGTAGGCCGCCGCGTTCACGCGCCGTCTGGTCGTGTTTATCAGGTTAAATTCAATCCGCCCAAAGTAGAAGGCAAAGACGACGtt < 1:5399/138‑1 (MQ=255)
aTTACGTTCTGGAATTCGACGTACCGGACGAACTGATTGTTGACCGTATCGTAGGCCGCCGCGTTCACGCGCCGTCTGGTCGTGTTTTTGACGTTTAATTAAATACGCCGAAAGTTTAAGGGAAAGACGACGTTTCCggg > 8:535810/1‑139 (MQ=255)
aTTACGTTCTGGAATTCGACGTACCGGACGAACTGATTGTTGACCGTATCGTAGGCCGCCGCGTTCACGCGCCGTCTGGTCGTGTTTTTCACCTTAAATTACATCCGCACAAAGTAGAAGGCAAAGACGACGCTACCCGt > 7:384519/1‑140 (MQ=255)
aTTACGTTCTGGAATTCGACGTACCGGACGAACTGATTGTTGACCGTATCGTAGGCCGCCGCGTTCACGCGCCGTCTGGTCGTGTTTTTAACGTTAAATTAAATACGCCGAAAGTATCAGGCAAATACGCAGTTACCggg > 6:364852/1‑139 (MQ=255)
tACGTTCTGGAATTCGACGTACCGGACGAACTGATTGTTGAAAGTATCGTAGGCCTCCGCGTTAAAGCGCCGTCTGGTCGTTTTTTTCACGGTTAATTGAAAACACCCAAAGTATAAGTCAAACAAGACCTTACCggg > 1:597009/1‑137 (MQ=255)
ttCTGGAATTCGACGTACCGCACGAACTGATTGTTTACCGTATCTTCGGCCGCCGCTTTCACGCGCCGTGTGGTCGTTTTTATCACTTTAAATACAATCCGCCTAAAGTATAAGGAAAAGACGACGTTACCGGTgaagaa < 5:364852/140‑1 (MQ=255)
tCTGGAATTCGACGTACCGGACGAACTGATTGTTGACCGTATCGTAGGCCGCCGCGTTCACGCGCCGTCTGGTCGTGGTTTTAACTGTAAATTGAATACGCCGCAAGTAGAAGGCAAACAACCCGGTACCGGTGAAGAAc > 6:144118/1‑140 (MQ=255)
tGGAATTCGACGTACCGGACGAACTGATTGTTGACCGTATCGTAGGCCGACGCGTTCACGCGCCGTCTGGTCGTGTTTATAACGTTAAATTAAATCCGCCGTAAGTAGAAAGCAAAAACGCCCGTTCAGGTGAAGAAc > 2:712454/1‑138 (MQ=255)
ggAATTCGACGTACCGGACTAACTGATTGTTGACCGTATCGTTGGCCGCCGCGTTCCCGCGCCGTCTGGTCGTGTTTATCACGTTAAATTCAATCCGCCGAAAGTAGACGGCAAAGACGACGTTACCGGTGAAGAACTGa < 8:594313/140‑1 (MQ=255)
taaTTCGACGTACGGGACTAAATTATTGTTGACCTTATCGTAGGCCGCCGCGTTCACGCGCCGTCTGGTCGTGTTTATCACGTTAAATTAAATCCGCCGAAAGTAGAAGGCAAAGACGACGTTACCGGTGAAGAACTg < 1:987984/137‑1 (MQ=255)
atttCGACGTACCTGACGAACTGATTGTTGACCGTATCGTAGGCCGCGGCGTTCACGCGCCGTCTGGTGGTGTTTATCACGTTAATTTCAATCCGCGTAAATTAGACGGCAAAGACGACGTTACCGGTGAAGAACTGACt < 7:16474/138‑1 (MQ=255)
aaTACGAGGTACCGGACGAACTGATTGTGGACCGTATCGTAGGCCGCCGCGTGCACGCGCCGGCTGGTCTTGTTTATCACGTTAAATTCAATCCGCCGAACGTAGAAGGCAAAGACGACGTTACCGGTGAAGAACTGACt < 5:710184/140‑1 (MQ=255)
aTTCGACGTACCGGACGAACTGATTGTTGACCGTATCGTAGGCCGCCCCGTTCACGCGCCGTCTGGTCGTGTTTATAACCTTAAATTAAATCCGCCGAAAGTATAAGGCAAAGACGCCGGTACCGGGGGAGAACGGAc > 3:336170/1‑138 (MQ=255)
cGACGTACCGGACGAACTGATTGTTGACCGTATCGTAGGCCGCCGCGTTCACGCGCCGTCTGGTCGTGTTTTTCACGTTTAATTCAATCCGCCGAAAGTAGAAGGCAAAGACGACGTTACCGGTGAAGAACTGACTAccc > 7:634112/1‑140 (MQ=255)
gTACCGGAGTATCTTATTGTTGACCGTATCGTAGGCCGCGGCGTTCCCGCGCCGTCTGGGCGTGTTTATCACGTTAAATTCAATCCGCCTAATGAATAAGGCAAAGACGACGTTACCGGTGAAGAACTGACTACCCGt < 2:366710/138‑1 (MQ=255)
tACCGGACGAACTGATTGTTGACCGTATCGTTGGCCGCCGCGTTCACGCGCGGTCTGGTCGTGTTTATCACGTTAAATTCAATCCGCCGAAAGTAGAAGGCAAAGACGACGTTACCGGTGAAGAACTGACTACCCGTa < 4:831490/138‑1 (MQ=255)
aCCGGACGAACTGATTGTTGACCGTATCGTAGGCCGCCGCGTTCACGCGCCGTCTGGTCGTGTTTTTGACGTTAAATTAAATCCGCCGCAAGTATAAGGCAAAGACGACGGTTACGGGGAAGAACTGACTACCCCTaaaa > 8:783072/1‑139 (MQ=255)
ccGGACTAACTGATTTTTGACCGTATCGTAGGCCGCCGCGTTCACGCGCCGTCTGGTCGTGTTTATCACGTTAAATTCAATCCGCCGAAATTAGAAGGAAAAGACGACGTTACGGGTGAAGAACTGACTACCCGTaaa < 1:427404/138‑1 (MQ=255)
ccGGACGAACTTATTGTTGACCGTTTCGTCGGCCGCCGCGTTCACGCGCGGGCTGGTCGTGTTTAACACGTTAAATTCAATCCGCCGAATGTATATGGCAATGACGACGTTACCGGTGAAGAACTGACTACCCGTaaa < 4:719154/138‑1 (MQ=255)
ccGGACGAACTGATTGTTGACCGTATCGTAGGCCGCCGCGTTCACGCGCCGTCGGGTCGTGTTTATCACGTTAAATTCAATCCGCCGAAAGTAGAAGGCAAAGACGACGTTACCGGTGAAGAACTGACTACCCGTaaa < 4:46098/138‑1 (MQ=255)
ccGAACTGATTGTTGCCCGTATCGTAGGCCGCCGCGTTCACGCGCCGTCTGGTCGTGTTTATCACGTTAAATTCAATCCGCCGAAAGTAGAAGTCAAAGACGACGTTACCGGTGAAGAACTGACTACCCGTAAAGACGAt < 6:477802/139‑1 (MQ=255)
actaaCTTATTGTTGCCGGTATCGTAGGCCGCCGCGTTCAGGCGCCGTGTGGTCGTTTTTTTCAGGTTAAATTCAATCGCCCTAAAGTAGAAGGCAACGACGACGTTACCGGTGAAGAACTGACTACCCGTAAAGACg < 1:269614/135‑1 (MQ=255)
aCGAACTGATTTTTGACCGTATCGTAGGCCGCCGCGTTCACGCGCCGTCTGTTCGTGTTTTTCACTTTAAATTCAATCCGCCGAAATTAGAAGGAAAAGACGACGTTACCGGTGAAGAACTGACTACCCGTAAAGACg < 4:956316/138‑1 (MQ=255)
tttttgtttACCGTATCGTAGGCCGCCGCGTGAACGCGCGGTCTGGTGGTGTTTCTAAGGTTAAATTCATTCCGTCTAATGTAGATCGCAAAGACGACGTTACGGGTGAAGAACTGACTACCCGTAAAGACGATCAGGaa < 5:476586/137‑1 (MQ=255)
ttgttgACCGTATCGTAGGCCGCCGCGTTCACGCGCCGTCTGGTCGTGTTTATCACGTTAAATTGAAACCGCCGCAAGTAGAAGGCAAAGACGACGTTAACGGGGAAGAACTGACTACCCGTAAAGCCCATCAGGGagag > 8:737150/1‑140 (MQ=255)
ttttgCCCGTATCTTCGGCCGCCGCGGTCACGCGCCGTCTGGGCGGGTTTATCACGTTAAATTCAATCCCCCGAAAGTAGAAGGCAAACACGACGTTACCGGTGAAGAACTGACTACCCGTAAAGACGATCAGGAaga < 3:818983/136‑1 (MQ=255)
ttgACCGTATCGTAGGCCCCCGCCTTCACGCGCCGTCTGGTCGTGTTATAGACGTGAAAATCAATACGCCCATAATAGTAGGCAAAGACGACGGTATCGGTTTAAAACGGACTAACAGTAAAAACGATCAGGAAgaga > 4:165633/1‑138 (MQ=255)
gcacGTATCGTAGGCCGCCGCGTGCACGCGCCGTCGGGTCGTGTTTATCCCGTTAAATTCAATCCGCCGAAAGTAGACGGCAAAGACGACGTTACCGGTGAAGAACTGACTACCCGTAAAGACGATCAGGAAGAGACcgt < 6:153491/137‑1 (MQ=255)
gACCGTATCGTAGGCCGCCGCGTTCACGCGCCGTCTGGTCGTGTTTATAACGTTAAATTCAATACGCCGAAAGTATAAGGCAAAGACGACGTTACCGGTGAAGAAATGACAACCCGTAAAGACGATCAGGAAAAGACcgt > 6:207355/1‑140 (MQ=255)
gACCGTATCGTAGGCCGCCGCGTTCACGCGCCGTCTGGTCGTGGTTATAACGTTAAATTAAAAACGCCGAAAGTAGAAGGGAAAGACGACGTTTCCGGTGTATCACTGCCTACCCCTAAAGACGATCAGGAAGAGAccct > 6:130657/1‑138 (MQ=255)
ccGTATCGTAGGCCGCCGCGTTCACGCGCCGTCTGGTCGTGGTTATAACGTTAAATTCCATCCGCCGAAAGTAGAAGGCAAAGCCGCCGTTACCGGTGAAGAACTGACTACCCGTTAATACGATAAGGAAGAGACcgt > 2:539767/1‑138 (MQ=255)
gtttCGGAGGCCGCGGCGGTCACGCGCCGTCTGGTCGTTTTTAGCAAGTTAAATTCAATCCGCCGAAAGTACAAGGCAAAGACGACGTGACCGGTGAAGAACTGACTACCCGTAAAGACGATCAGGAAGAGACcgtacgt < 6:680121/137‑1 (MQ=255)
tATCGTAGGCCGCCGCGTTCACGCGCCGTCTGGTCGTGTTTATCACCTTAAATTAAATCCCCCGAAAGTAGAAAGCAAAGACGACGTTAACGGGGATTAACTGACAACCCGTAAAGACGGTCAGGAAGAGACcgtacgta > 7:650547/1‑140 (MQ=255)
aTCGTCGGCCGCCGCGTTCACGCGCCGTCTGGTCGTGTTTATCACGTTAAATTCAATCCGCCGAACGTAGACGGCAAAGACGACGTTACCGGTGAAGAACTGACTACCCGTAAAGACGATCAGGAAGAGACcgtacgt < 2:341297/138‑1 (MQ=255)
aTCGTAGGCCGCCGCGTTCACGCGCCGTCTGGTCGTGTTTATAACGTTTAATTCAATCCGCCGAAAGGAGAATGCAAAGACGACGGTACCGGGGTAGCACTGACTACCCGGAAAGCCGATCAGGAAGCGCCcgtacgg > 4:404343/1‑137 (MQ=255)
aTCGTAGGCCGCCGCGTTCACGCGCCGTCTGGTCGTGGTTATCACGTTAAATTAAATCCGCCGAAAGTTTAAGGCAAAGACCACGTTAACGGTGAAGAACTGCCTACCCGTAAAGACGATCAGGAAGAGACcgtacgt > 2:778856/1‑138 (MQ=255)
cggcggcCGCGTTCACGCGCAGTCTGGTCGTGTTTATAACGTTAAATAAAATCCGCCTAAAGTAGAAGGCAAAGACGACGTTACCGGTGAAGAACTGACTACCCGTAAAGACGATCAGGAAGAGACCGTACGTAAACg < 1:1035095/137‑1 (MQ=255)
cgcccgccgCGTGCACGCGCCGGCTGGTCGTGTTTATCCGGTTAAATTCAATCCGCCGAAAGTAGAACCCAACGACGACGTTACCGGTGAAGAACTGACTACCCGTAAAGACGATCAGGAAGAGACCGTACGTAAACg < 3:262071/135‑1 (MQ=255)
ccgccgCGTTCACGCGCCGTCTGGGTGTGTTTATCACTTAAAATTCAATCCGCCGAAAGTAGAAGGCAAAGACGACGTTACCGGTGAAGAACTGACTACCCGTAAAGACGATCAGGAAGAGACCGTACGTAAACGTCTgg < 7:211646/140‑1 (MQ=255)
cgccgcGTTCACGCGCCGTCTGGTCGTGTTTATAACCTTAAAATCAATCCCGCGAAAGTATAAGGCAAAGACGACGGTAACGGTGAGTAACGGTCAACCCGGAAATACGAACATGAAGAGACCGATCGTAAACGTCAGGt > 6:315257/1‑140 (MQ=255)
cgccgcGTTCACGCGCCGTCTGGTCGTGGTTATCACGTTAAATTGAATCCGCCGAAAGTAGTAGGGAAAGACGACGTTACAGGTGAAGAACTGACTACCCGTAAAGCCGATCAGGAAGAGACCGTACGTAAACGTCTGGt > 6:315254/1‑140 (MQ=255)
ccgcGTTCACGCGCCGTCTGGTCGTGTTTATCACGGTAAATTCAATCCGCCGAAAGTAGAAGGCAAAGACGACGTTACCGGTGATGAACTGACTACCCGTAAAGACGATCAGGAAGAGACCGTACGTAAACGTCTGGTTg > 5:871750/1‑140 (MQ=255)
ccgcGTTCACGCGCCGTCTGGTCGTGGTTATAACGTTAAATTCAATCCGCCGAAAGTAGAAGGCAAAGCCGACGTTACCGGTGAAGAAATGACGACCCGTAAAGACCATCAGGAAGAGACCGTACGTAAAAGTCTGGt > 4:388073/1‑138 (MQ=255)
cgcgTTCACGCGCCGTCTGGTCGTGTTTATCACGTTAAATTAAATCCGCCGAAAGTAGAAGGCAAAGACGCCGTTAACGGTGAAGAACTGACTACCCGTAAAGACGATCAGGAAGAGACCGTACGTAAACGTCTGGtt > 3:1030328/1‑138 (MQ=255)
gcgTTCACGCGCCGTCTGGTCGTGTTTATCACGTTAAATTCAATCCGCCGAAAGTAGAAGGCAAAGACGACGTTACCGGTGAAGAACTGACt > 2:782635/1‑92 (MQ=255)
gcgTTCACGCGCCGTCTGGTCGTGTTTATCACGTTAAATTCAATCCGCCGAAAGTAGAAGGCAAAGACGACGTTACCGGTGAAGAACTGACt < 1:782635/92‑1 (MQ=255)
gcgTTCACGCGCCGTCTGGTCGTGTTTATCACGTTAAATTCAATCCGCCGAAAGTAGAAGGCAAAGACGACGTTACCGGGGAAGAACTGACTACCCGGAAAGCCGATCAGGAAGAGACCGTACGTAAACGTCTGGTTg > 2:65862/1‑138 (MQ=255)
gcgTTCACGCGCCGTCTGGTCGTGTTTATCACGGTAAATTCAATCCGCCGAAAGTAGAAGGCAAAGACGACGGTACCGGTGAAGAACAGACTACCCGTAAAGACGATCAGGCAGCGCCCGGACGTAAACGTCTGGTTg > 3:994120/1‑138 (MQ=255)
gcgTTCACGCGACGTCTGGTCGTGGTTATAACGTTAAATTCAATCCGCCGAAAGTAGATGGCAAAGACGACGTTAACGGTGAAGAACTGACTACACGTAAAGAAGCTCTGTCTGGGACCGTACGTAACAGTCAGGTTg > 2:65859/1‑138 (MQ=255)
ggTTCAGGCGCCGTCTGTTCGTGTTTATCACTTTAATTTAAAACAGCGGAAATTAGAAGCCATAGACGACGTTACCGGTGAAGAACTGACTACCCGTAAAGACGATCAGGAAGAGACCGTACGTAAACGTCTGGTTGAAt < 8:417069/139‑1 (MQ=255)
ggTTCACGCGCCGTCTGGTCGTGTTTATCACTTAAAATTCAATCCGCCGAAAGTAGACGGCAAAGACGACGTTACCGGTGAAGAACTGACTACCCGTAAAGACGATCAGGAAGAGACCGTACGTAAACGTCTGGTTGAAt < 7:629558/139‑1 (MQ=255)
cgTTCACGCGCCGTCTGGTCGTGGTTATCACGTTAAATTCAATCCGCCGAAAGTAGAAGGCAAAGCCGACGGTACCGGGGAAGCACTGACTACCCGTAAAGCCGATCAGGAAGAGCCCGTACGGAAACGTCTGGTTGa > 2:639663/1‑138 (MQ=255)
ttCACGCGCCGTCTGGTCGTTTTTATCACTTTAAATTCAATCCGCCGAAAGTAGAAGGCAAAGACGACGTTACCGGTGAAGAACTGACTACCCGTAAAGACGATCAGGAAGAGACCGTACGTAAACGTCTGGTTGAAt < 1:550070/138‑1 (MQ=255)
ttCACGCGCCGTCTGGTCGTGTTTATCACGTTAAATTCAATCCGCCTAAATTACAAGGCAAAGACGACGTTACCGGTGAAGAACTGACTACCCGTAAAGACGATCAGGAAGAGACCGTACGTAAACGTCTGGTTGAATAc < 7:349232/140‑1 (MQ=255)
cggcgcCGTCTGGTCTTGTTTATCCCGTTAAATTCAATCCCCCTAATGTAGAAGGCAAAGACGACGTTACCGGTTAAGAACTGACTACCCGTAAAGACGATCAGGAAGAGACCGTACGTAAACGTCTGGTTGAATACCAt < 5:73162/138‑1 (MQ=255)
ccgcgCCGTCTGGTCGTGTTTATCACGTTAAATTCAATCCGCCGAAAGTAGAAGGCAAAGACGACGTTACCGGTGAAGAACTGACTACCCGTAAAGACGATCAGGAAGAGACCGTACGTAAACGTCTGGTTGAATACCAt < 6:580568/139‑1 (MQ=255)
cgcgCCGTCTGGTCGTGTTTATCCCGTTAAATTCAATCCGCCGAAAGTAGAAGGCAAAGACGACGTTACCGGTGAAGAACTGACTACCCGTAAAGACGCTCAGGAAGAGCCCGTTCGGAAACGTCTGGTTGAGTTCCATc > 8:252015/1‑140 (MQ=255)
gcgcCGTCTGGGCGTGTTTATCACGTTAAATTCAATCCGCCGAAAGTAGACGGCAACGACGACGTTACCGGTGAAGAACTGACTACCCGTAAAGACGATCAGGAAGAGACCGTACGTAAACGTCTGGTTGAATACCATCa < 6:508675/140‑1 (MQ=255)
gcgcCGGTTGGTGTTTTTTATCTCTTTAAAGTCAAACGCCCGAAATTAGAAGGCAAAGACGACGTTACCGGTGAAGAACTGACTACCTGTAAAGACGATCAGGAAGAGACCGTACGTAAACGTCTGGTTGAATACCAt < 2:863359/138‑1 (MQ=255)
ccGTCTGGTCGTGTTTATCACGTTAAATTCAATCCGCCGAAAGTAGACGGCAAAGACGACGTTACCGGTGAAGAACTGACTACCCGTAAAGACGATCAGGAAGAGACCGTACGTAAACGTCTGGTTGAATACCATCAGAt < 8:577981/140‑1 (MQ=255)
ccGTCTGGTCGTGTTTATCACGTTAAATTCAATCCGCCGAAAGTAGACGGCAAAGACGACGTTACCGGTGAAGAACTGACTACCCGTAAAGACGATCAGGAAGAGACCGTACGTAAACGTCTGGTTGAATACCATCAGAt < 5:484754/140‑1 (MQ=255)
ccGTCTGGTCGTGTTTATCACGTTAAATTCAATCCGCCGAAAGTAGAAGGCAAAGACCACGTTACCGGTGAAGAACTGACTACCCGTAAAGACGATCAGGAAGAGACCGTACGTAAACGTCTGGTTGAATACCATCAGAt > 6:111159/1‑140 (MQ=255)
ccGTCTGGGCGTGTGTATCACGTTAAATTCAATCCGCCGAATTGAGAAGCCAAAGACGACGTTACCGGTGAAGAACTGACTACCCGTAAAGTCGATCAGGAAGAGACCGTACGTAAACGTCTGGTTGAATACCATCAg < 3:646709/138‑1 (MQ=255)
gTCTGGTCGTGGTTATCACGTTTAATTAAATCCGCCGAAAGTAGAAGGCAAAGACGACGTTAACGGTGAAGAACTGACTACCCGTAAAGACGATCAGGAAGAGACCGTACGGAAACGTCTTGTTGAATACCATCAGAt > 1:917195/1‑138 (MQ=255)
tCTGGTCGTGTTTATCCCGGTAAATTCAAGCCGCCGAAAGTAGAAGGCAAAGACGACGGTACCGGTGATCAACTGACTACCCGTAAAGGCGATCAGGAAGAGACCGTACGTAAACGTCTGGTTGGATACCATCAGAGGAc > 8:241833/1‑140 (MQ=255)
tCTGGTCGTGTTTATCACGTTAAATTAAATCCGCCGAAAGTAGAAGGCAAAGACGCCGTTACCGGTGAAGAACTGACTACCCGTAAAGACGATCAGGAAGAGACCGTACGTAAACGTCTGGTTGAATACCATCAGATGAc > 8:656411/1‑140 (MQ=255)
gcgggtTTATCCCGTAAAATTAAATCCCCCTAACTTCCACTGCAACGACGACGTTACCGGTGAAGAACTGACTACCCGTAAAGACGATCAGGAAGAGACCGTACGTAAACGTCTGGTTGAATACCATCAGATGACTGCAc < 7:931239/136‑1 (MQ=255)
gcGTGTTTATCACGTTAAATTCAATCCGCCGAAAGTAGAAGGCAAAGACGACGTTACCGGTGAAGAACTGACTACCCGTAAAGACGATCAGGAAGAGACCGTACGTAAACGTCTGGTTGAATACCATCAGATGACTGc < 3:1024583/137‑1 (MQ=255)
tttATAACGTTAAATTAAATCCGCCGAAAGTAGAAGGCAAATACGACGTTACCGGTGAAGAACTGACTACCCGTAAAGACGATCAGGAAGAGACCCTACGTAAACGTCTGGTTGAATACCATCAGATGACTGCACCGcgg > 8:114819/1‑138 (MQ=255)
gttATAACCTTAAAATCAATCCGCCGAAAGTACAAGGCAAAGACGACGTTACCCGGGAATAACATACTCCCCGAAAAGAAGCTCAGGAACAGACCGTACCAAAACGTCTCGGTGAAAAACAACATATGACTGCACCCCTg > 6:400277/2‑140 (MQ=255)
aCGTTAAATTCAATCCGCGTAAATTAGAAGGAAAAGACGACGTTACCGGTGAAGAACTGACTACCCGTAAAGACGATCAGGAAGAGACCGTACGTAAACGTCTGGTTGAATACCATCAGATGACTGCACCGCTGATCg < 1:647836/138‑1 (MQ=255)
aCGTTAAATTCAATCCGCCGACAGTAGACGGCAAAGACGACGTTACCGGTGAAGAACTGACTACCCGTAAAGACGATCAGGAAGAGACCGTACGTAAACGTCTGGTTGAATACCATCAGATGACTGCACCGCTGATCGGc < 8:105156/140‑1 (MQ=255)
cGTTAAATTCAATCCGCCGAAAGTAGAAGGCAAAGCCGACGTTACCGGTGAAGAACTGACTACCCGTAAAGACGATCAGGAAGAGACCGTACGTAAACGTCTGGTTGATTAACATCAGATGACAGCACCGCTGATCgg > 3:570408/1‑138 (MQ=255)
tttAAATTCAATCCGCCGAAAGAAGACGCAAAAGACGACGTTACCGGTGAAGAACTGACTACCCGTAAAGACGATCAGGAAGAGACCGTACGTAAACGTCTGGTTGAATACCATCAGATGACTGCACCGCTGATCGGcta < 7:535810/139‑1 (MQ=255)
ttgaaaTTCAATCCGCCGAAAGTTGACGGAAAACACGACGTTACCGGTGAAGAACTGACTACCCGTAAAGACGATCAGGAAGAGACCGTACGTAAACGTCTGGTTGAATACCATCAGATGACTGCACCGCTGATCGGcta < 6:603869/137‑1 (MQ=255)
gTTAAATTCAATCCGCCGAAAGTAGAAGGCAAAGACGACGTTACCGGTGAAGAACTGACTACCCGTAAAGACGATCAGGAAGAGACCGTACGTAAACGTCTGGTTGAATACCATCAGATGACTGCACCGCTGATCGGcta < 7:61806/140‑1 (MQ=255)
ttAACTTCACCCCGCCCAAAGAACACGGCCATGACGACGTTAACGGGGAATAAATGACTACCCGTAAAGACGATCAGGAAGAGACCGTACGTAAACGTCTGGTTGAATACCATCAGATGACTGCACCGCTGATCGGctac < 8:638730/140‑1 (MQ=255)
ttAAATTCAATCCGCCGAAAGTAGAAGGCAAAGACGACGTTACCGGTGAAGAACTGACTACCCGTAAAGACGATCAGGAAGAGACCGTACGTAAACGTCTGGTTGAATACCATCAGATGACTGCACCGCTGATCGGctac > 8:740333/1‑140 (MQ=255)
aaTTCAATCCGCCGAAAGTAGAAGGCAAAGACGACGTTACCGGTGAAGAACTGACTACCCGTAAAGACGATCAGGAAGAGACCGTACGTAAACGTCTGGTTGAATACCATCAGATGACTGCACCGCTGATCGGctact > 2:907492/1‑138 (MQ=255)
aaTTCAATCCGCCGAAAGTAGAAGGCAAAGACGACGTTACCGGTGAAGAACTGACTACCCGTAAAGACGATCAGGAAGAGACCGTACGTAAACGTCTGGTTGAATACCATCAGATGACTGCACCGCTGATCGGCtactac < 8:634112/140‑1 (MQ=255)
acAATCCGCCGAAAGTAGAAGGCAAAGACGACGTTACCGGTGAAGAACTGACTACCCGTAAAGACGATCAGGAAGAGACCGTACGTAAACGTCTGGTTGAATACCATCAGATGACTGCACCGCTGATCGGCTactact < 3:864001/137‑1 (MQ=255)
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GGCAGACGCGATGAAAGAAGCGGGCATCAATGTTGATTACGTTCTGGAATTCGACGTACCGGACGAACTGATTGTTGACCGTATCGTAGGCCGCCGCGTTCACGCGCCGTCTGGTCGTGTTTATCACGTTAAATTCAATCCGCCGAAAGTAGAAGGCAAAGACGACGTTACCGGTGAAGAACTGACTACCCGTAAAGACGATCAGGAAGAGACCGTACGTAAACGTCTGGTTGAATACCATCAGATGACTGCACCGCTGATCGGCTACTACT > NZ_CP022686/4056827‑4057098
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| Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
N/A
