Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A13 F35 I0 R1
|
271 |
8871.0 |
10354886 |
98.4% |
10189207 |
136.1 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
freq |
annotation |
gene |
description |
| RA |
NZ_CP022686 |
4,056,962 |
C→A |
17.7% |
F137L (TTC→TTA) |
adk → |
adenylate kinase |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NZ_CP022686 | 4,056,962 | 0 | C | A | 17.7%
| 224.7
/ 9.7
| 153 | F137L (TTC→TTA) | adk | adenylate kinase |
| Reads supporting (aligned to +/- strand): ref base C (26/90); new base A (18/14); total (49/104) |
| Fisher's exact test for biased strand distribution p-value = 4.04e-04 |
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 |
Only 100 of 154 total aligned reads displayed.
CAGGCAGACGCGATGAAAGAAGCGGGCATCAATGTTGATTACGTTCTGGAATTCGACGTACCGGACGAACTGATTGTTGACCGTATCGTAGGCCGCCGCGTTCACGCGCCGTCTGGTCGTGTTTATCACGTTAAATTCAATCCGCCGAAAGTAGAAGGCAAAGACGACGTTACCGGTGAAGAACTGACTACCCGTAAAGACGATCAGGAAGAGACCGTACGTAAACGTCTGGTTGAATACCATCAGATGACTGCACCGCTGATCGGCTACTACTC > NZ_CP022686/4056825‑4057099
|
caggcagACGCGATGAAAGAAGCGGGCATCAATGTTGATTACGTTCTGGAATTCGACGTACCGGACGAACTGATTGTTGACCGTATCGTAGTCCGCCGCGTTCACGCGCCGTCTGGTCGGGTTTATAACGttaaattaaa > 2:503264/1‑140 (MQ=255)
aggcagAAGCGATGAAAGAAGCGGGCATCAATGTTGATTACGTTCTGGAATTCGACGTACCGGACGAACTGATTGTTGACCGTATCGTAGGCCGCCGCGTTCACGCGCCGTCTGGTCGTGTTTATCACGTTAAATTCAAt < 6:885419/140‑1 (MQ=255)
gcagACACGATGAAAGAAGCGGGCATCAATGTTGATTACGTTCTGGAATTCGACGTACCGGACGAACTGATTGTTGACCGTATCGTAGGCCGCCGCGTTCACGCGCCGTCTGGTCGTGTTTATCACGTTAAATTCAATcc > 6:72609/1‑140 (MQ=255)
agACGCGATGAAAGAAGCGGGCATCAATGTTGATTACGTTCTGGAATTCGACGTACCGGACGAACTGATTGTTGACCGTATCGTAGGCCGCCGCGTTCACGCGCCGTCTGGGCGGGTTTATGACGGTTAATTGAATccgc > 4:476075/1‑140 (MQ=255)
cgcgATGAAAGAAGCGGGCATCAATGTTGATTACGTTCTGGAATTCGACGTACCGGACGAACTGATTGTTGACCGTATCGTAGGCCGCCGCGTTCACGCGCCGTCTGGTCGTGTTTATCACGTTAAATTCAATCCGCCGa < 1:1343361/140‑1 (MQ=255)
tGAAAGAAGCGGGCATCAATGTTGATTACGTTCTGGAATTCGCCGTACCGGACGACCTGATTGTTGACCGTATCGTAGGCCGCCGCGTTCACGAGCCGTCTGGTCGTTGTTAACAAGGTAAAATAAAACCGCCGaaaatt > 7:334561/1‑137 (MQ=255)
tGAAAGAAGCGGGCATCAATGTTGATTACGTTCTGGAATTCGACGTACCGGACGAACTGATTGTTGACCGTATCGTAGGCCGCCGCGTTCACGCGCCGTCTGGTCGTGTTTATGACGTTTAATTTAATCCGCCGCAAGtt > 8:342253/1‑139 (MQ=255)
gAAAGACGCGGTCAGCAATGTTGATTACGTTCTGGACTTCGACGTACCGGACGTACTGATTGTTGACCGGATCGTAGGCCGCCGCGTTCACGCGCCGTCTGGTCGGGTTTATCACGTTAAATTCAATCCGCCGAAAGTAg < 2:1061546/140‑1 (MQ=255)
gAAAGAAGCGGGCATCAATGTTGATTACGTTCTGGAATTCGACGTACCGGACGAACTGATTGTTGACCGTATCGTAGGCCGCCGCGTTCACGCGCCGTCTGGTCGTGTTTATCACGTTAAATTCAATCCGCCGAAAGTAg < 5:778136/140‑1 (MQ=255)
agaagCGGGCATCAATGTTGATTACGTTCTGGAATTCGACGTACCGGACGAACTGATTGTTGACCGTATCGTAGGCCGCCGCGTTCTCGCGCCGTGTGGTCGTGTTTATCACTTTAAATTAAATACCCCGAAAGTAGAAg > 5:1195389/1‑140 (MQ=255)
agaagCGGGCATCAATGTTGATTACGTTCTGGAATTCGACGTACCGGACGAACTGATTGTTGACCGTATCGTAGGCCGCCGCGTTCACGCGCCGTCTGGTCGTGTTTATCACGTTAAATTCAATCCGCCGAAAGTAGAAg > 4:172062/1‑140 (MQ=255)
atgCGGGCATCAATGTTGATTACGTTCTGGAATTCGACGTACCGGACGAACTGATTGTTGACCGTATCGTAGGCCGCCGCGTTCACGCGCCGGCTGGGCGTGTTTATCACGTTAAATTCAATCCTCCGAAAGTAGAAGGc < 4:785985/138‑1 (MQ=255)
gCATCAATGTTGATTACGTTCTGGAATTCGCCGTACCGGACGAACTGATTGTTGACCGTATCGTAGGCCGCCGCGTTCACGCGCCGGCTGGTCGGGTTTTTCACGGTAAATTCCATCCGCCGAAAGTAGAAGGCAAAgcc > 6:542472/1‑138 (MQ=255)
gCATCAATGTTGATTACGTTCTGGAATTCGACGTACCGGACGAACTGATTGTTGACCGTATCGTAGGCCGCCGCGTTCACGCGCCGTCTGGTCGTGTTTATAACGTGTAATTCAATCCGCCGAAAGTAGAAGGCAAAgac > 2:312252/1‑140 (MQ=255)
cATCAATGTTGATTACGTTCTGGAATTCGACGTACCGTACGAACTGATTGTTGACCGTATCGTAGGCCGCCGCCTTCACGCGCCGTCTGGTCGTGGTTATCACGGTTAATTAAATCCGGCGCAAGTAGAAGGCAAAgagg > 8:586981/1‑138 (MQ=255)
tGTTGATTACGTTCTGGAATTCGACGTACCGGACGAACTGATTGTTGACCGTATCGTAGGCCGCCGCGTTCACGCGCCGTCTGGTCGTGTTTTTCACGTTAAATTCAATCCCCCGAAAGTAGAAGGCAAAGACCACGTTa > 1:1207423/1‑140 (MQ=255)
ttttaTTACGTTCTGCAATTCGACGTACCGGACGAACTTATTGTTGACCGTATCGTTGGCCGCCGCGTTCACGCGCCGTCTGGTGGTGTTTATCACGTTAAATTCAACCCGCCGAACGTAGAAGGCAAACACGACGTTAc < 8:64915/136‑1 (MQ=255)
gTTGATTACGTTCTGGAATTCGACGTACCGGACGAACTGATTGTTGACCGTATCGTAGGCCGCCGCGTTCACGCGCCGTCTGGTCGTGTTTATCACGTAAAATTCAATCCGCCGAAAGTAGAAGGCAAAGACGACGTTAc < 8:1178409/140‑1 (MQ=255)
gTTCATTACGTGCTGTAATTCGACGTACCGCACTAACTTATTGGTGACCGTAGCGTAGGCCGCCGCGTGCACGCGCCGTCTGGTCGTGTTTATCACGTAAAATTCAATCCGCCGAAAGTAGAAGGCAAAGACGACGTTAc < 3:825685/140‑1 (MQ=255)
ttaTTACGTTCTGTAATTCTAGGTACCGGCCGAACTGATTGTTGACCGTATCGTAGGCCGCCGCTTTCACGCGCCGTCTGGTCGTGTTTATCACGTTAAATTCAATCCGCCGAAAGTAGAAGGAAAAGACGACGTTACCg < 7:689732/138‑1 (MQ=255)
tGATTACGTTCTGGAATTCGACGTACCGGACGAACTGATTGTTGACCGTATCGTAGGCCGCCGCGTTCACGCGCCGTCTGGTCGTGTTTATAGCGGTAAATTGAATACGCCCAAATTAGAAGGCAAATCCGCCGTTAccc > 6:147975/1‑139 (MQ=255)
ttccggtCTTGAATTCGACGTACCGGACTAATTGATTGTTGACTGTATCTTTGTCCGCCGCGTTCACGCGCCGTCGGGACGTGTTTATCACGTTAATTTAAATCCGCCGAAAGTATAAGCCAACCACGACGTTACCGGTg < 6:1124068/134‑1 (MQ=255)
cGTTCTGGAATTCGACGTCCCGGACTAACTGTTTGTTGCCCGTATCTTAGGCCGCCGCGTTCACGCGCCGTCTGGGCGTGTTTATCACGTCAAATTAAATCGGCTTAAATTATAAGTAAAAGACGACGTTACCGGTgtag < 2:69471/140‑1 (MQ=255)
ttCTGTAATTCGACGTACCGGACGAACTGATTGTTGACGGTATCGTAGGCCGCCGCGTTCACGCGCCGTCTGGTCGTGTTTATCACGTTAAATTCAATCCGCCGAAAGTAGAAGGCAAAGACGACGTTACCGGTgaagaa < 1:728995/140‑1 (MQ=255)
ttCTGTAATTCGACGTACCGGACGAACTGATTGTTGACCGTATCGTAGGCCGCCGCGTTCACGCGCCGTCTGGTCGTGTTTATCACGTTAAATTCAATCCGCCGAAAGTAGAAGGCAAAGACGACGTTACCGGTgaagaa < 4:409815/140‑1 (MQ=255)
ttCTGGAATTCGACGTACCGGACGAACTGATTGTTGACCGTATCGTAGGCCGCCGCGTTCACGCGCCGTCTGGTCGTGTTTATAACGTTAAATTAAATACCCCGAAAGTAGAAGGCCAAGACGACGTTACCGGTgaagaa > 6:1114526/1‑140 (MQ=255)
ttCTGGAATTCGACGTACCGGACGAACTGATTGTTGACCGTATCGTAGGCCGCCGCGTTCACGCGCCGTCTGGGCGTGTTTATCACGTTAAATTCAATCCGCCTAAAGTAGAAGGCAAAGACGACGTTACCGGTgaagaa < 6:160332/140‑1 (MQ=255)
tGGAATTCGACGTACCGGACGAACTGATTGTTGACCGTATCGTAGGCCGCCGCGTTCACGCGCCGTCTGGTCGTGTTTATCACGATAAATTAAATACGCCGAAAGTAGAAGGCAAAGACGACGTTTCCGGTGAAGAACTg > 8:818842/1‑140 (MQ=255)
tGGAATTCGACGTACCGGACGAACTGATTGTTGACCGTATCGTAGGCCGCCGCGTTCACGCGCCGTCTGGTCGTGTTTATCACCTTAAATTAAAACCGCCGAAAGTAGAAGGCAAAGACGCCGTTTCCGGGGAAGAACTg > 6:607310/1‑140 (MQ=255)
tGGAATTCGACGTACCGGACGAACTGATTGTTCACCGTATCGTAGGCCGCCGCGTTCACGCGCCGTGTGGTCGTGGTTATCGCGTTAAATTCAATCAGGCGAAAGAAGTACGCCAAGACGACGTTGCCCTGGAAGAACTg > 6:925443/1‑140 (MQ=255)
aaTTCGACGTACCGGACTAACTGATTGTTGACCGTATCGTAGGCCGCCGCGTTCACGCGCCGTCTGGTCGTGTTTATCACGTTAAATTCAATCCGCCTAAAGTAGAAGGCAAAGACGACGTTACCGGTGAAGAACTGACt < 3:1162939/140‑1 (MQ=255)
ttCGACGTACCGGACGAACTGATTGTTGACCGTATCGTAGGCCGCCGCGTTCACGCGCCGTCTGGTCGTGTTTATCACGTTAAATTAAATCCGCCGAAAGTAGAAGGCAAAGACGACGTTACCGGTGAAGAACTGACTAc < 5:314422/140‑1 (MQ=255)
tCGACGTACCGGACGAACTGATTGTTGACCGTATCGTAGGCCGCCGCGTTCACGCGCCGTCTGGTCGTGTTTTTAACGTTAAATTCAATACGCCGCAAGTTGAAGGCAAATACCACGTTACCGGTGAAGAACTTACTAcc > 3:116934/1‑140 (MQ=255)
cGACGTACCGGACGAACTGATTGTTGACCGTATCGTAGGCCGCCGCGTTCACGCGCCGTCTGGTCGTGTTTATCCCGTTAAATTAAATACGCCGAAAGTAGAAGGCAAATACGACGTTACCGGTGAAGAAATGACAAccc > 2:389844/1‑140 (MQ=255)
cGTACCGGACTAACTGTTTGTTGACCGTATGGTAGGCCGCCGCGTTCACGCGCCGTCTGGTCGTGTTTTTCACGTTAAATTCAATCCGCCTAAAGTATAAGGCAAAGACGACGTTACCGGTGAAGAACTGACTACCCGTa < 4:1263974/140‑1 (MQ=255)
ccGGCCGAAATGTTTGTTGACCGTATCGTAGGCCGCCGGGTTCACGCGCAGTCTGGTCGTGTTTTTCACGTTAAATTCAATCCGCCGAATGTAGATGGAAAAGACGACGTTACCGGTGAAGAACTGACTACCCGTAAAGa < 7:599210/140‑1 (MQ=255)
ccGGACGAACTGATTGTTGACCGTATCGTAGGCCGCCGCGGTCACGCGCGGTCTGGTCGTTTTTATCACGTTAAATTAAATCCGCCTAAATTACAAGGAAACGACGACGTTACCGGTGAAGAACTGACTACCCGTAAAGa < 7:151917/140‑1 (MQ=255)
ggaggaACTGATTGTTGACCGTATCGTTGGCCGCCGCGTTCACGCGCCGTCTGGGCGTGTTTATCTCGTTAAATTCAATCCGCCGAACGTAGAAGGCAAAGACGACGTTACCGGTGAAGAACTGACTACCCGTAAAGACg < 6:829027/140‑1 (MQ=255)
gACGAACTGATTGTTGACCGTAGCGTCGGCCGCCGCGTTCACGCGCGGTCTGGTCGTGTTTATCACGTTAAATTCAATCCGCCTAAAGTAGAAGGCAAAGACGACGTTACCGGTGAAGAACTGACTACCCGTAAAGACGa < 1:279190/140‑1 (MQ=255)
ccGAACTTATTGTTGACCGTTTCGTAGGCCGCCGCGTTCACGCGCCGTGTGTGCGTGTTTATCACGTTAAATTCAATCCGCCGAAAGTAGAAGGAAAAGACGACGTTACCGGTGAAGAACTGACTACCCGTAAAGACGAt < 4:293724/139‑1 (MQ=255)
ccGAACTGTTTGTTGACCTAATCGTCGGCCGCCGCGTTCACGCGCTGTCTGGTGGTTTTTATAACGTTAAATTCAATCCGCCGAAAGTTGACGGCAAAGACGACGTTACCGGTGAAGAACTGACTACCCGTAAAGACGAt < 3:673161/139‑1 (MQ=255)
ccGAACTGATTGTTGACGTTATGGTTGGCCGCCGCTTTCACGCGCGGTCTGGTCGTGTTTATCACGTAAAATTCAATCCGCCGAAAGTAGAAGGAAAAGACGACGTTACCGGTGAAGAACTGACTACCCGTAAAGACGAt < 7:455252/139‑1 (MQ=255)
aCGAATTGATTGTTGACCGTATCGTTGGCCGCCGCGTTCACGCGCCGTCTGGTCGTGTTTATCAGTTTAAATTCAATCCGCCGAATGTAGAAGGAAAAGACGACGTTACCGGTGAAGAACTGACTACCCGTAAAGACGAt < 5:73274/140‑1 (MQ=255)
aCGAACTTATTGTTGACCGTATCTTAGGCCGCCGCGCTCACGCGCCGTCTGTTCGTGTTTATCACGTTAAATTCATTCCGCGTAAAGTAGAAGGCAAAGACGACGTTACCGGTGAAGAACTGACTACCCGTAAAGACGAt < 8:467767/140‑1 (MQ=255)
aCGAACTGATTGTTGCCCGTAGCGTAGGCCGCCGCGTTCACGCGCCGTCTGGTCGTGTTTATCACGTTAAATTCAATCCGCCGAAAGTAGAAGGCAAAGACGACGTTACCAGTGAAGAACTGACTACCCGTAAAGACGAt < 2:656124/140‑1 (MQ=255)
aCGAACTGATTGTTGACAGTATCGTAGGCCGCCGCTTTCACGCGCCGTCTGGTCGTGTTTATCAGGTTAAATTCAATCCGCCGAAAGTAGAAGGCAAAGACGACGTTACCGGTGAAGAACTGACTACCCGTAAAGACGAt < 4:264713/140‑1 (MQ=255)
aCGAACTGATTGTTCACCGTTTCGTAGGCCGCCGCGTTCACGCGCCGTGGGGGCGTGTTTATCACGTTAAATTCAATCCGCCGAAAGTATACGGCAACGACGACGTTACCGGTGAAGAACTGACTACCCGTAAAGACGAt < 2:136291/140‑1 (MQ=255)
tGATTGTTGACCGTATCGTAGGCCGCCGCGTTCACGCGCCGTCTGGTCGTGTTTATCAGGTTAAATTCAATCCGCCGAAAGTAGAAGGCAAAGACGACGTTACCGGTGAAGAACTGACTACCCGTAAAGACGATCAGGaa < 8:861432/140‑1 (MQ=255)
aTTGTTGACCGTATCGTAGGCCGCCGCTTGCACGCGCCGTCTGGTCGTGTTTATAACGTTAAATTAAATCCGCCGAAAGTAGAAGGCAAAGACGACGTTACCGGTGAAGAACTGACTACCCGTAAAGACGATCAGGAaga < 4:300127/140‑1 (MQ=255)
tgtggACCGTATCGTAGGCCGCCGCGTTCACGCGCCGTCTGGTAGTGGTTATCAAGTTAAAATTAATCAGCCGCAAGTAGAAGGCAAAGCCCACGGTTCCGGTGATACACGGACTACCCCGAAAGACCATCAGGAAgaga > 4:1065993/1‑140 (MQ=255)
tggtgACCGTATCTTAGGCCGCCGCTTTCAGGCGCCGTGTGGTCGTTTTTATCCCTTTAAATTAAATCCCCCTAAAGTAGATGGCAAAGACGACGTTACCGGTGAAGAACTGACTACCCGTAAAGACGATCAGGAAgaga < 1:50813/137‑1 (MQ=255)
ttgACCGTATCGTTGGCCGCCGCGTTCCCGGGCGGTCTGGTCGTGTTTATCACGTAAAATTCAATCCGCCGAAAGTAGAAGGAAAAGACGACGTTACCGGTGAAGAACTGACTACCCGTAAAGACGATCAGGAAGAGAcc < 5:981796/140‑1 (MQ=255)
gACCGTATCGTAGGCCGCCGCGTTCACGCGCCGTCTGGTCGTGTTTATAACCTTAAAATCAAAACCCCCAAACTACAAGGCAAAGACGACCTTACCGGAGAAGAACAGACAACCCCTAAATACCAAAACGAAGAGACcga > 1:819868/1‑139 (MQ=255)
gACCGTATCGTAGGCCGCCGCGTTCACGCGCCGTCTGGTCGTGGTTATCACGGTAAAATAAATCCGCCGCAAATAGACGGCAAACACGCCGGTACCGGTGAAGAACTGCCTACCCCTAAACACGATCAGTAAGAGACcgt > 1:1095868/1‑140 (MQ=255)
gACCGTATCGTAGGCCGCCGCGTTCACGCGCCGTCTGGGCGGGTGTTTCACGTTAAATTCAATACGCCGCAAGTAGTAGGCAAAGCCGGCGTTTCCCGTGAAGAACTGCCGACCCGGAAAGGCCGGCAGGTAGAGGCcgg > 2:1116478/1‑139 (MQ=255)
tATCGTAGGCCGCCGCGTTCACGCGCCGTCTGGTCGTGGTTATGACGGTAAATTAAATCCGCCGAAAGTAGAAGGCCAAGACGGCGGTAACGGGGATGCACAGCCGACCCGCAAAGACGAGCCGGAAGAGACcggtcgga > 6:59973/1‑134 (MQ=255)
aTCGTTGCCCTCCGCGTGCACGCGCCGTCTGGGCGTGTTTCTCACGTTAAATTCAATCCGCCGAAAGTAGAAGGCAAAGACGACGTTACCGGTGAAGAACTGACTACCCGTAAAGACGATCAGGAAGAGACCGTACGTaa < 8:201341/140‑1 (MQ=255)
aTCGTAGGCCGCCGCGTTCCCGCGCCGTCTGGTCGGGTTTATCCCGTTAAATTAAATCCGCCGAAAGTATAAGGCAAATACGACGTTACCGGTGAAGAACTTAATAACCGTAAAGACGATCAGGCAGAGAACgtaagtaa > 8:275483/1‑140 (MQ=255)
aTCGTAGGCCGCCGCGTTCACGCGCCGTCTGGTCGTGTTTATCACGTTAAATTCAATCCGCCGAAAGTACACGCCAAAGACGACGTTACCGGTGAAGAACTGACTACCCGTAAAGACGATCAGGAAGAGACCGTACGTaa < 1:615844/140‑1 (MQ=255)
aTCGTAGGCCGACGCTTTCACGCGACGTCGGGGCGTTTTTATCATTTTAATTGATTTGCGCCCAAATTAGAAGCGAAAGACGTCGTTACCGGTGAAGAACTGACTACCCGTAAAGACGATCAGGAAGAGACCGTACGTaa < 5:952556/140‑1 (MQ=255)
ttggCCGCGGGGTTCACGCGCCGTCTGGTCGTGTTTATCACTTTAAATTCAATCCGCCTAAATTATACGGCAAACACGACGTTACCGGTGAAGAACTGACTACCCGTAAAGACGATCAGGAAGAGACCGTACGTAAACGt < 5:162161/138‑1 (MQ=255)
aGGCCGCCTCGTTCCCGCGCCGGCTGGCCGTTTTTAACACGTTAAATACAATCCGCCGAAATTTGATGCAAACGACGACGTTACCGGTGAAGAACTGACTACCCGTAAAGACGATCAGGAAGAGACCGTACGTAAACGTc < 3:321975/140‑1 (MQ=255)
aGGCCGCCGCGTTCACGCGCCGTCTGGTCGTGTTTATCAGGTTAAATTCAATCCGCCGAAAGTAGAAGGCAAAGACGACGTTACCGGTGAAGAACTGACTACCCGTAAAGACGATCAGGAAGAGACCGTACGTAAACGTc < 4:274702/140‑1 (MQ=255)
aGGCCGCCGCGTTCACGCGCCGTCTGGTCGTGTTTATCACTTTAAATTCAATCCGCCGAAAGTAGAAGCCAAAGACGACGTTACCGGTGAAGAACTGACTACCCGTAAAGACGATCAGGAAGAGACCGTACGTAAACGTc < 6:373468/140‑1 (MQ=255)
ccgccgCGTTCACGCGCCGTCTGGTCGTGTTTATCACGTTAAATTCAATCCGCCGAAAGTAGAAGGCAAAGACGACGTTACCGGTGAAGAACTGACTACCCGTAAAGACGATCAGGAAGAGACCGTACGTAAACGTCTgg < 2:1106334/140‑1 (MQ=255)
ccgcGTTCACGCGCCGTCTGGTCGTGTTTTTGACGTTTAATTAAATCCGCCGAAAGTAGAAGGCAAAGACGACGGTACCGGGGAAGAACTGACGACCCGTAAAGACGATCAGGAAGAGACCGTAAGTAAACCTCTGGTTg > 8:271780/1‑140 (MQ=255)
ccgcGTTCACGCGCCGTCTGGTCGTGTTTATCACGTTAAATTCAATCCGCCGAAAGTAGAAGGCAAAGACGACGTTACCCGTGAAGAACTGACTACCCGTAAAGACGATCAGGAAGAGACCGTACGTAAACGTCTGGTTg > 4:616559/1‑140 (MQ=255)
ccgcGTTCACGCGCCGTCTGGTCGTGTTTATAACGGTAAATTCAATCCGCCGAAAGTAGAAGGCAAAGACGACGGTACCGGGGAAGAAAAGACAACCCGTAAAGACGATCAGGAAGAGGCCCTACGTAAACGTCAGGttt > 6:276313/1‑139 (MQ=255)
gcgTTCACGCGCCGTCTGGTCGTGTTTATCACGTTAAATTCAATCCGCCGAAAGTATAAGGCAAAGACGACGTTACCGGTGAAGAACTGACTACCCGTAAAGACGATCAGGAAGAGACCGTACGTAAACGTCTGGTTGaa < 3:428134/140‑1 (MQ=255)
cgTTCACGCGCGGTCTGGTCGTGTTTATCACGTTAAATTCAATCCGCCGAAAGTAGAAGGCAAACACGACGTTACCGGTGAAGAACTGACTACCCGTAAAGACGATCAGGAAGAGACCGTACGTAAACGTCTGGTTGAAt < 8:466431/140‑1 (MQ=255)
cgTGCACGCGCGGTCTGGTCGTGTTTAACACGTTAAATTCAATCCGCCTAAAGTAGAAGGCAAACACGACGTTACCGGTGAAGAACTGACTACCCGTAAAGACGATCAGGAAGAGACCGTACGTAAACGTCTGGTTGAAt < 7:1149201/140‑1 (MQ=255)
ttCCCGGGCCGTCTGGGCGTTGTTATCAGTTTAAATTCAATCCGCCGAAATTAGAAGGCAAAGACGACGTTACCGGTGAAGAACTGACTACCCGTAAAGACGATCAGGAAGAGACCGTACGTAAACGTCTGGTTGAATAc < 4:239569/140‑1 (MQ=255)
ttCACGCTCCGTCGGGTCGTGTTTCTCACGTTAAATTCAATCCGCCTAAATTCGAAGGAAAAGACGACGTTACCGGTGAAGAACTGACTACCCGTAAAGACGATCATGAAGAGACCGTACGTAAACGTCTGGTTGAATAc < 1:754218/140‑1 (MQ=255)
ttCACGCGCCGTCTGGGCGTGTTTATCACGTTAAATTCAATCCGCCGAAAGTCGAAGGAAAAGACGACGTTACCGGTGAAGAACTGACTACCCGTAAAGACGATCAGGAAGAGACCGTACGTAAACGTCTGGTTGAATAc < 3:893345/140‑1 (MQ=255)
ttCACGCGCCGTCTGGGCGTGTTTATCACGTTAAATTCAATCCGCCGAAAGTATAAGGCAAAGACGACGTTTCCGGTGAAGAACTGACTACCCGTAAAGACGATCAGGAAGAGACCGTACGTAAACGTCTGGTTGAATAc < 2:819868/140‑1 (MQ=255)
ttCACGCGCCGTCTGGGCGTGTTTATAACGTTAATTTCAAACCGCCGAAAGTAGAAGGCAAAGACGACGTTACCGGTGAAGAACTGACTACCCGTAAAGACGATCAGGAAGAGACCGTACGTAAACGTCTGGTTGAATAc < 7:1050450/140‑1 (MQ=255)
tgcACGCGCCGTCTGGTGGTGTTTATCACGTTAAATTCAATCGGCCGAAAGTAGATGGACAAGACGACGTTACCGGTGAAGAACTGACTACCCGTAAAGACGATCAGGAAGAGACCGTACGTAAACGTCTGGTTGAATAc < 2:709294/138‑1 (MQ=255)
ccgcgCCGTCTGGGCTTGTTTATCACGTTAAATTAAATCCGCCGAATGTAGAAGGAAAAGACGACGTTACCGGTGAAGAACTGACTACCCGTAAAGACGATCAGGAAGAGACCGTACGTAAACGTCTGGTTGAATACCAt < 3:215104/139‑1 (MQ=255)
ccgcgCCGGCTGGGCGTGTTTATCACGTTAAATTCCATCCCCCGAAAGTAGACTGCAAAGACGACGTTACCGGTGAAGAACTGACTACCCGTAAAGACGATCAGGAAGAGACCGTACGTAAACGTCTGGTTGAATACCAt < 8:789821/139‑1 (MQ=255)
aggcgcCGGATGTTCGTGTTTATCACGTTAAATTCAATCCGCCGAAAGTAGATGGAAAAGACGACGTTACCGGTGAAGAACTGACTACCCGTAAAGACGATCAGGAAGAGACCGTACGTAAACGTCTGGTTGAATACCAt < 3:359810/138‑1 (MQ=255)
gcgcCGTGTGGTGGTTTTTTACAGGTTAAATTCAATCCGCCCAACTTAGAAGGCAATGTGGACGTTACCGGTTAAGAACTGACTACCCGTAAAGACGATCAGGAAGAGACCGTACGTAAACGTCTGGTTGAATACCATCa < 1:289486/140‑1 (MQ=255)
gcgcCGTCTGGTCGTGTTTATCACGTTAAATTCAATCCGCCGAAAGTAGAAGGCAAAGACGACGTTACCGGTGAAGAACTGACTACCCGTAAAGACGATCAGGAAGAGACCGTACGTAAACGTCTGGTTGAATACCATCa < 2:931797/140‑1 (MQ=255)
ccggttGGTCGTGTTTATCACGTTAAATTCAATCCGCCGAAAGTACACGGCAAAGACGACGTTACCGGTGAAGAACTGACTACCCGTAAAGACGATCAGGTAGAGACCGTACGTAAACGTCTGGTTGAATACCATCAGAt < 4:126665/135‑1 (MQ=255)
ccGTCTGGTCGTTTTTATCACGTTAAATTCAATCCGCCTAAATTCTAAGGCAAAGACGACTTTACCGGTGAAGAACTGACTACCCGTAAAGACGATCAGGAAGAGACCGTACGTAAACGTCTGGTTGAATACCATCAGAt < 3:495087/140‑1 (MQ=255)
ccGTCGGGTCGTGTTTAACACGTTAAATTCAACCCGCCTAAAGTAGACGCCAAAGACGACGTTACCGGTGAAGAACTGACTACCCGTAAAGACGATCAGGAAGAGACCGTACGTAAACGTCTGGTTGAATACCATCAGAt < 1:1088363/140‑1 (MQ=255)
cGTCTGTTCGTGTTTATCAGGTTAAATTCAATCCGCCGAAATTAGAAGTCAAAGACGACGTTACCGGTGAAGAACTGACTACCCGTAAAGACGATCAGGAAGAGACCGTACGTAAACGTCTGGTTGAATACCATCAGATg < 2:840611/140‑1 (MQ=255)
tggtgtTTATCACTTTAAATTCAATCGGCAGAAAGTATAAGGCATAGACGACGTTACCGGTTAAGAACTGACTACCCGTAAAGACGATCAGGAAGAGACCGTACGTAAACGTCTGGTTGAATACCATCAGATGACTGCAc < 5:413628/138‑1 (MQ=255)
gcGTGTTTATCACGTTAAATTCAATCCGCCTAAAGTAGAAGGCAAAGACGACGTTACCGGTGAAGAACTGACTACCCGTAAAGACGATCAGGAAGAGACCGTACGTAAACGTCTGGTTGAATACCATCAGATGACTGCAc < 5:944829/139‑1 (MQ=255)
gtttttATCAGGTAAAATTAAAGCCGCCTAACGTAGAAGCCAAAGACGACGTTACCGGTGAAGAACTGACTACCCGTAAAGACGATCAGGAAGAGACCGTACGTAAACGTCTGGTTGAATACCATCAGATGACTGCACCg < 5:36237/137‑1 (MQ=255)
gtgtTTATCACGTTAAATTCAATCCGCCGAACGTAGACGCCAAAGACGACGTTACCGGTGAAGAACTGACTACCCGTAAAGACGATCAGGAAGAGACCGTACGTAAACGTCTGGTTGAATACCATCAGATGACTGCACCg < 7:1001056/140‑1 (MQ=255)
tttATCACGTTAAATTCAATCCGCCGAAAGTAGAAGGCAAAGACGACCTTACCGGTGAAGAACTGACTACCCGTAAAGACGATCAGGAAGAGACCGTACGTAAACGTCTGGTTGAATACCATCAGATGACTGCACCGCTg > 4:949511/1‑140 (MQ=255)
ttATCACGTTAAATTCATTCCGCCGAAAGTAGAAGGCAAAGACGACGTTACCGGTGAAGAACTGACTACCCGTAAAGACGATCAGGAAGAGACCGTACGTAAACGTCTGGTTGAATACCATCAGATGACTGCACCGCTGa < 8:330999/140‑1 (MQ=255)
atccctttAAATTAATTCCGCCGAAAGTACACGCCAAAGACTACGTTACCGGTGAAGAACTGACTACCCGTAAAGACGATCAGTAAGAGACCGTACGTAAACGTCTGGTTGAATACCATCAGATGACTGCACCGCTGATc < 6:1102498/134‑1 (MQ=255)
aCGTTAAATTAAATCCGCCGAAAGTATATGGCAACGACGACGTTACCGGTGAAGAACTGACTACCCGTAAAGACGATCAGGAAGAGACCGTACGTAAACGTCTGGTTGAATACCATCAGATGACTGCACCGCTGATCGGc < 3:145312/140‑1 (MQ=255)
ttaaaaTTCAATCCGCCGAACGTAGAAGGCAAAGACGACGTTACCGGTGAAGAACTGACTACCCGTAAAGACGATCAGGAAGAGACCGTACGTAAACGTCTGGTTGAATACCATCAGATGACTGCACCGCTGATCGGcta < 1:258473/137‑1 (MQ=255)
gTTAAATTCAATCCGCCGAAAGTAGAAGGCAAAGACGACGTTACCGGTGAAGAACTGACTACCCGTAAAGACGATCAGGAAGAGACCGTACGTAAACGTCTGGTTGAATACCATCAGATGCCTGCACCGCTGAACGGcta > 6:731688/1‑140 (MQ=255)
gTTAAATTCAAGCCGCCGAAAGTCGAAGGCAAAGACGACGGTACCGGTGAAGAACTGACTACCCGTAAAGACGATCAGGAAGAGACCGTACGTAAACGTCTGGTTGAATACCATCAGAGGACTGCACCGCTGATCGGcta < 4:753763/140‑1 (MQ=255)
ttAAATTCAATCCGCCGAAAGTACACGGCAAAGACGACGTTACCGGTGAAGAACTGACTACCCGTAAAGACGATCAGGAAGAGACCGTACGTAAACGTCTGGTTGAATACCATCAGATGACTGCACCGCTGATCGGctac < 3:661560/140‑1 (MQ=255)
aaaTTCAATCCGCCGAAAGAAGAAGGCAAAGACGACGATACCGGTGAAGAACTGACTACCCGTAAAGACGATCAGGAAGAGACCGTACGTAAACGTCTGGTTGAATACCATCAGATGACTGCACCGCTGATCGGctacta > 1:417398/1‑140 (MQ=255)
aTTCAATCCGCCGAAAGTAGAAGGCAAAGACGACGTTACCGGTGAAGAACTGACTACCCGTAAAGACGATCAGGAAGAGACCGTACGTAAACGTCTGGTTGAATACCATCAGATGACTGCACCGCTGATCGGCTactact > 8:1107562/1‑140 (MQ=255)
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CAGGCAGACGCGATGAAAGAAGCGGGCATCAATGTTGATTACGTTCTGGAATTCGACGTACCGGACGAACTGATTGTTGACCGTATCGTAGGCCGCCGCGTTCACGCGCCGTCTGGTCGTGTTTATCACGTTAAATTCAATCCGCCGAAAGTAGAAGGCAAAGACGACGTTACCGGTGAAGAACTGACTACCCGTAAAGACGATCAGGAAGAGACCGTACGTAAACGTCTGGTTGAATACCATCAGATGACTGCACCGCTGATCGGCTACTACTC > NZ_CP022686/4056825‑4057099
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| Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
N/A
