Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A11 F36 I0 R1
|
229 |
12610.8 |
9774876 |
98.4% |
9618477 |
135.7 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
freq |
annotation |
gene |
description |
| RA |
NZ_CP022686 |
4,056,962 |
C→A |
13.8% |
F137L (TTC→TTA) |
adk → |
adenylate kinase |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NZ_CP022686 | 4,056,962 | 0 | C | A | 13.8%
| 223.4
/ 3.3
| 138 | F137L (TTC→TTA) | adk | adenylate kinase |
| Reads supporting (aligned to +/- strand): ref base C (25/81); new base A (15/7); total (50/88) |
| Fisher's exact test for biased strand distribution p-value = 9.80e-05 |
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 |
Only 100 of 139 total aligned reads displayed.
AGACGCGATGAAAGAAGCGGGCATCAATGTTGATTACGTTCTGGAATTCGACGTACCGGACGAACTGATTGTTGACCGTATCGTAGGCCGCCGCGTTCACGCGCCGTCTGGTCGTGTTTATCACGTTAAATTCAATCCGCCGAAAGTAGAAGGCAAAGACGAC‑GTTACCGGTGAAGAACTGACTACCCGTAAAGACGATCAGGAAGAGACCGTACGTAAACGTCTGGTTGAATACCATCAGATGACTGCACCGCTGATCGGCTACTAC > NZ_CP022686/4056830‑4057097
|
agACGCGATGAAAGAAGCGGGCATCAATGTTGATTACGTTCTGGAATTCGACGTACCGGACGAACTGATTGTTGACCGTATCGTAGGCCGCCGCGTTCACGCGCCGTCTGGTCGTGTTTATAAACTTAAATTCAAAccgc > 6:143254/1‑140 (MQ=255)
cgcgATGAAAGAAGCGGGCATCAATGTTGATTACGTTCTGGAATTCGACGTACCGGACGAACTGATTGTTGACCGTATCGTAGGCCGCCGCGTTCACGCGCCGTCTGGTCGTGTTTATCACGTTAAATTCAATccgcc < 1:725103/138‑1 (MQ=255)
cgcgATGAAAGAAGCGGGCATCAATGTTGATTACGTTCTGGAATTCGACGTACCGGACGAACTGATTGTTGACCGTATCGTAGGCCGCCGCGTTCACGCGCCGTCTGGTCGTGTTTATCACGTTAAATTCAATCCGCCGa < 3:182375/140‑1 (MQ=255)
cgcgATGAAAGAAGCGGGCATCAATGTTGATTACGTTCTGGAATTCGACGTACCGGACGAACTGATTGTTGACCGTATCGTAGGCCGCCGCGTTCACGCGCCGTCTGGTCGTGGTTATGACGTTAAATTAAATACGCCGa > 5:577655/1‑140 (MQ=255)
tGAAAGAAGCGGGCATCAATGTTGATTACGTTCTGGAATTCGACGTACCGGACGAACTGATTGTTGACCGTATCGTAGGCCGCCGCGTTCACGCGCCGTCTGGTCGTGTTTATCACGTTAAATTCAATCCGCCGAAAGTa < 6:120134/140‑1 (MQ=255)
taaaGAAGCGGGCATCAATGTTGATTACGTTCTGGAATTCGACTTACCGGACGAACTGATTGTTGACCGTATCGTAGGCCGCCGCGTTCACGCGCCGTCTGGTCGTGTTTATCACGTTAAATTCAATCCGCCGAAAGTAg < 6:463040/139‑1 (MQ=255)
gAAAGAAGCGGGCATCAATGTTGATTACGTTCTGGAATTCGACGTACCGGACGAACTGATTGTTGACCGTATCGTAGGCCGCCGCGTTCCAGCGCCGTCTGGTCGTGGTTATCGCGGTAAAGTGAATCCGCCGCAAGt > 2:325144/1‑138 (MQ=255)
gAAAGAAGCGGGCATCAATGTTGATTACGTTCTGGAATTCGACGTACCGGACGAACTGATTGTTGACCGTATCGTAGGCCGCCGCGTTCACGCGCCGTCTGGTCGTGTTTATCACGTTAAATTCAATCCGCCGAAAGt < 2:1106470/138‑1 (MQ=255)
gAAAGAAGCGGGCATCAATGTTGATGACGTTCTGGAATTCGACGTACCGGACGAACTGATTGTTGACCGTATCGTAGGCCGCCGCGTTCACGCGCCGTCTGGTCGTGTTTATCACGTTAAATTCAATCCGCCGAAAGTAg < 6:57614/140‑1 (MQ=255)
aaaGAAGCGGGCATCAATGTTGATTACGTTCTGGAATTCGACGTACCGGACGAACTGATTGTTGACCGTATCGTAGGCCTCCGCGTTCACGCGCCGTCTGGTCGTGGTTATAAAAGTAAATTAAAAACGACCAAAGTa > 1:299989/1‑138 (MQ=255)
gCGGGCATCAATGTTGATTACGTTCTGGAATTCGACGTACCGGACGAACTGATTGTTGACCGTATCGTAGGCCGCCGCGTTCACGCGCCGTCTGGTCGTGTTTTTCACCTTAAATTTAATCCGCCGAAAGTAGAATGCaa > 3:490468/1‑140 (MQ=255)
gCGGGCATCAATGTTGATTACGTTATGGAATACGACGTACCGGACGAACTGATTGTTGACCGTATCGTAGGCCGCCGCGTTCACGCGCCGGCTGGGCGTGTTTATCACGGTAAATTAAATCCGCCGAAAATAGCAGGCaa > 7:867136/1‑140 (MQ=255)
gCATAAATGTTGATTACGTTCTGGAATTCCACGAACCGGACGAACTGATTGTTGCCCGAATCGTCGGCCGCCGCGTTCACGCGCCGTCTGGTCGTGTTTATCACGTTAAATTCAATCCGCCGAAAGTAGAAGGCAAAgac < 8:540771/140‑1 (MQ=255)
cATCAATGTTGATTACGTTCTGGAATTCGACGTACCGGACGAACTGATTGTTGACCGTATCGTAGGCCGCCGCGTTCACGCGCCGTCTGGTCGTGTTTTTGACGTTTAATTTCATCCGGCGAAAGTTGAAGGCAAAgacg > 8:259192/1‑140 (MQ=255)
cAATGTTGATTACGTTCTGGAATTCGACGTACCGGACGAACTGATTGTTGACCGTATCGTAGGCCGCCGCGTTCACGCGCCGTCTGGTCGTGTTTATCACGTTAAATTGAATCCGCCGAAAGTAGAAGGCAAAgacgc > 2:1181047/1‑137 (MQ=255)
tttGATTCCGTTCTGTAATGCTACTAACGGTACCAAATGATTGTTCACCTTATGGTAGGCCGCCGCGTTCACGCGCCTTCTGGTCTTTTTTATCACGTTAAATTCAATCCGCCTAAATTATAATGCAAAGACGAC‑Gtt < 1:1165337/137‑1 (MQ=255)
tttGATTACGTTCTGGAAATCGACGTCCCGGACGAACTGATTGTTGACCGTATCGTAGGCCGCCGCGTTCCCGCGCCGTCTGGGCGTGTTTATCACGTTAAATTCAATCCGCCGAAAGTAGAAGGCAAAGACGAC‑GTTAc < 7:868708/139‑1 (MQ=255)
gTTGATTACGTTCTGGAATTCGACGTACCGGACGAACTGATTGTTGACCGTATCGTCGGCCGCCGCGTTCACGCGCCGTCTGGTCGTGTTTATCACGTTAAATTCAATCCGCCGAAAGTAGACGGCAAAGACGAC‑Gtt < 2:1213558/138‑1 (MQ=255)
aTTACGTTCTGGAATTCGACGTACCGGACGAACTGATTGTTGACCGTATCGTAGGCCGCCGCGTTCACGCGCCGTCTGGTCGGGTTTATAACGTTAAATTAAATACGCCGAAAGTATAAGGCAAAGACCAC‑CTTTCCggg > 7:508777/1‑139 (MQ=255)
ttACGTTCTGTAATTCGCCGTACCGGACGAACTGATTGTTGACCGTATCGTAGGCCGCCGCGTTCACGCGCCGTCTGGTCGTGTTTATCACGTTAAATTCAATCCGCCGAAAGTAGAAGGCAAAGACGAC‑GTTACCGGTg < 4:371314/140‑1 (MQ=255)
tACGTTCTGGAATTCGACGTACCGGACGAACTGATTGTTGACCGTATCGTAGGCCGCCGCGTTCACGCGCCGTCTGGTCGTGTTTATCACGTTAAATTCAATCCGCCGAAAGTAGAAGGCAAAGACGAC‑GTTACCGGTga > 4:96039/1‑140 (MQ=255)
gTTCTGGAATTCGACGTACCGGACGAACTGATTGTTGACCGTATCGTAGGCCGCCGCGTTCACGCGCCGTCTGGTCGTGTTTTTCAACTTTAATTTATTCCGCCGACAGTTATAGGCAAAGACGAC‑GTTTACGGTgtata > 5:454056/1‑136 (MQ=255)
gTTCTGGAATTCGACGTACCGGACGAACTGATTGTTGACCGTATCGTAGGCCGCCGCGTTCACGCGCCGTCTGGTCGTGTTTTTAACGGTAAATTGAATCCCCCGCAAGTAGAAGGCGAAGACGAC‑GGTACCGGTgcaga > 8:651172/1‑140 (MQ=255)
ttCTGGAATTCGACGTACCGGACGAACTGATTGTTGACCGTATCGTAGGCCGCCGCGTTCACGCGCCGTCTGGTCGTGTTTATAACGTTAAATTCAATCCGCCGAAAGTAGAAGGCAAAGACGAC‑GTTACCGGTgaag < 1:336832/138‑1 (MQ=255)
tCTGGAATTCGACGTACCGGACGAACTGATTGTTGACCGTATCGTAGGCCGCCGCGTTCACGCGCCGTCTGGTCGTGGTTTTAACGTTAAATTCAATCCGCCGCAAGTAGAAGGCGAAGGCGCC‑GTTACCGGTggagacc > 5:140549/1‑138 (MQ=255)
taaTTCGACGTACCGGACGAACTTATTGTTGACCGTATCGTAGGCCGCCGCGTTCACGCGCCGTCTGGTCGTGTTTATCACTTTAAATTCAATCCGCCGAAAGTAGAAGGCAAAGACGAC‑GTTACCGGTGAAGAACTg < 1:222563/137‑1 (MQ=255)
taaTTCGACGTACCGGACGAACTTATTGTTGACCGTATCGTAGGCCGCCGCGTTCACGCGCCGGCTGGTCGTGTTTATCACTTTAAATTCAATCCGCCTAATGAAGACGGCAAACACGAC‑GTTACCGGTGAAGAACTg < 2:854887/137‑1 (MQ=255)
gAAATCGACGTACCGGACCAACTGATTGTTGACCGTATCGTAGGCCGCCGCGTTCACGCGCGGGCTGGTCGTGTTTATCACGTTAAATTCAATCCGCCTAAAGTAGAAGGCAAAGACGAC‑GTTACCGGTGAAGAACTg < 2:240168/138‑1 (MQ=255)
caaTTCGCCGTACCGGACGACCTGATTGTGGACCGTTTCGTAGGCCGCCGCGGTCACGCGCCGTCTGGTCGTGTTTATCACGTTAAATTCAATCCGCCGAAATTAGAAGGCAAAGACGAC‑GTTACCGGTGAAGAACTGAc < 6:1132793/139‑1 (MQ=255)
caaTTCGACGTACCGGACTAACTGATTGTTGACCGTATCGTCGGCCGCCGCGTTCCCGCGCCGTCTGGTCGTGTTTATCACGTTAAATTAAATCCGCCTAAAGTATAAGGCAAACACGAC‑GTTACCGGTGAAGAACTGAc < 5:850920/139‑1 (MQ=255)
aatgctaCGTACCGGACTAACTGATTTTTGACCGTATCGTAGGCCGCCGCGTTCACGCGCCGTCTGGTCGTGTTTATCACGTTAAATTCAATCCGCCGAAAGTATAAGGAAAAGACGAC‑GTTACCGGTGAAGAACTGACt < 7:210511/134‑1 (MQ=255)
aaTTCGACGTACCGGACGAACTGATTGTTGACCGTATCGTAGGCCGCCGCGTTCACGCGCCGTCTGGTCGTGTTTATCACGTTAAATTGAATCCGCCGAAAGTAGAAGGCAAAGACGCC‑GGTTCCGGGGAAGCACTgc > 2:315139/1‑137 (MQ=255)
aTTCGACGTACCGGACGAACTGATTGTTGACCGTATCGTAGGCCGCCGCGTTCACGCGCCGTCTGGTCGTGTTTATGACGTTAAATTAAATACGCCGCAAGTAGAAGGCAAAGACGAC‑GTTACCGGTGAAGAACTgtc > 1:602557/1‑136 (MQ=255)
gACGTACCGGACGAACTGATTGTTGACCGTATCGTAGGCCGCCGCGTTCACGCGCCGTCTGGTCGTGTTTATCACGTTAAATTCAAt < 4:890427/87‑1 (MQ=255)
gACGTACCGGACGAACTGATTGTTGACCGTATCGTAGGCCGCCGCGTTCACGCGCCGTCTGGTCGTGTTTATCACGTTAAATTCAAt > 3:890427/1‑87 (MQ=255)
cGTACGGGACTAACTTTTTTTTGACGGTATCGTAGGCGGCGGCGTTCACGCGCCGTCTGGTCGTGTTTATCACGTTAAATTAAATCCGCCTAAAGTAGACGGCAACGACGAC‑GTTACCGGTGAAGAACTGACTACCCg < 2:139640/138‑1 (MQ=255)
tACCGGACGAACTGTTTGTTGACCGTATCGTAGGCCGCCGGGTTCACGCGCCGTCTGGTCGTGTTTATCCCGTTAAATTCAATCCGCCGAAAGTAGAAGGCAAAGACGAC‑GTTACCGGTGAAGAACTGACTACCCGTaaa < 4:1217219/140‑1 (MQ=255)
tACCGGACGAACTGATTGTTGACCGTATCGTAGGCCGCCGCGTTCACGCGCCGTCTGGTCGTGTTTATCACGTTAAATTAAATACGCCGAAAGTAGAAGGCAAAGACGAC‑GTTACCGGTGAAGAACTGACTACCCGTa > 2:160530/1‑138 (MQ=255)
aCCGGACGAACTGATTGTTGACCGTATCGTAGGCCGCCGCGTTCACGCGCCGTCTGGTCGTGTTTTTGACGTTAAAATAAATACCCCGAAAGTAGAAGGGAAAGACGAA‑GTTAACGGTGAAGAACTGACAACCCggtaag > 8:835590/1‑135 (MQ=255)
aCCGGACGAACTGATTGTTGACCGTATCGTAGGCCGCCGCGTTCACGCGCCGTCTGGTCGTGTTTATGACGTTAAATTAAATCCGCCGAAAGTTGAAGGCCAAGACGAC‑GTTACAGGTGAAGAACTGCCGACCCGTAAAg > 4:874797/1‑140 (MQ=255)
aCCGGACGAACTGATTGTTGACCGTATCGTAGGCCGCCGCGTTCACGCGCCGTCTGGTCGTGGTTATAAAGTTAAATTAAAACCCCCGAAAATATAAGGCAAAGACGCCAGTAACCGG‑GAAGAACAGACAAccccataaa > 7:523752/1‑134 (MQ=255)
ccGGACTAACTGATTGTTGACCGTATCGTAGGCCGCCGCGTTCACGCGCCGTCTGGTCGTGTTTATCACGTTAAATTCAATCCGCCGAAAGTAGAAGGCAAAGACGAC‑GTTACCGGTGAAGAACTGACTACCCGTaaa < 2:52769/138‑1 (MQ=255)
ggACTAACTTATTGTTGACCGTTTGGTAGGCCGCCGCGTTCACGCGCCGTCTGGTCGTGTTTATCACTTTAAATTCAATCCGCCGAAAGTAGAAGCCAAAGACGAC‑GTTACCGGTGAAGAACTGACTACCCGTAAAGACg < 3:794528/140‑1 (MQ=255)
gACGAACTGATTGTTGACCGTATCGTAGGCCGCCGCGTTCACGCGCCGTCTGGTCGTGTTTATGACGTTAAAATGAATGCCCCGAAATGTGAAGGCAAAGACCAC‑CGTACCGGTGAAGAACAGACTTCCCGTAAATAcca > 5:7064/1‑138 (MQ=255)
actaaatGATTGTTGACCGTATCGTTGGCCGCCGCGTTCACGCGCCGTCTGGTCGTTTTTATCACGTTAAATTCAATCCGCCGAAAGTATAAGGCAAAGACGAC‑GTTACCGGTGAAGAACTGACTACCCGTAAAGACGAt < 7:795504/134‑1 (MQ=255)
actaaCTTATTGTTGACCGTATGGTAGGCCGCCGCGTTCCCGCGCCGTCTGGTCTTTTTTATCACTTTAAATTCAATCCGCCCAAAGAAGAAGGAAAAGACGAC‑GTTACCGGTGAAGAACTGACTACCCGTAAAGACGAt < 4:406265/137‑1 (MQ=255)
actaaCTGATTGTTGCCCGTTGCGATGGCCGCCGCTTTCACGCGCCGTGTGGTCGTGTTTATCACGTTAAATTCATTCCGCGGAATGTTGTAGGCAAAGACGAC‑GTTACCGTTGAAGAACTGACTACCCGTACAGACGAt < 6:995577/137‑1 (MQ=255)
actaaCTGATTGTTGACCGTATCGTAGGCCGCCGCGTTCACGCGCCGTGTGGTCGTGTTTATCACTTAAAATTAAATCCCCCTAAAGTAGAAGGCAAAGACGAC‑GTTACCGGTGAAGAACTGACTACCCGTAAAGACGAt < 3:597107/137‑1 (MQ=255)
aCGAACTTATTGTTGACCGTATCGTAGGCCGCCGCGTTCACGCGCCGTCTGGTCGTGTTTATCACGTTAAATTCAATCCGCCGAAAGTAGAAGGCAAAGACGAC‑GTTACCGGTGAAGAACTGACTACCCGTAAAGACg < 2:57774/138‑1 (MQ=255)
aCGAACTTATTGTTGACCGTATCGTAGGCCGCCGCGTTCACGCGCCGTCTGGTCGTGTTTATCACGTTAAATTCAATCCGCCGAAAGTAGAAGGCAAAGACGAC‑GTTACCGGTGAAGAACTGACTACCCGTAAAGACGAt < 6:822188/140‑1 (MQ=255)
aCGAACTGTTTGTTGACCGTATCGTAGGCGGCCGCGTTAACGCGCGGTCTGGTCGTTTTTATCACGTTAAATTCAATCCGCTGAAAGTAGAAGGCAACGACGAC‑GTTACCGGTGAAGAACTGACTACCCGTAAAGACGAt < 7:526709/140‑1 (MQ=255)
aCGAACTGTTTGTGGACCGTATCGTAGGCCGCCGCGTTCACGGGCCGTCGGGTCGTGTTTTTCACGTTAAATTCAATCCGCCGAATGTAGAAGGCAAAGACGAC‑GTTACCGGTGAAGAACTGACTACCCGTAAAGACg < 2:442963/138‑1 (MQ=255)
aCGAACTGATTGTTGACGGTATCGTAGGCCGCCGCGTTCACGCGCCGTCGGGGCGTGTTTATCAGTTTAAATTCAATCCGCCGAAATTAGATGGCAAAGACGAC‑GTTACCGGTGAAGAACTGACTACCCGTAAAGACGAt < 7:806630/140‑1 (MQ=255)
aCGAACTGATTGTTGACCGTATCGTAGGCCGCCGCGTTCACGCGCCGTCTGGTCGTGTTTATCACGTTAAATTCAATCCGCCTAAAGTAGAAGGCAAAGACGAC‑GTTACCGGTGAAGAACTGACTACCCGTAAAGACg < 1:48367/138‑1 (MQ=255)
gAACTGATTGTTGACCGTATCGTAGGCCGCCGTGTTCACGCGCCGTCTGGTCGTGTTTATCACGGTAAATTCAATACGCCCAAAGTAGAAGGCAAAGACGAC‑GTTACCCGTGAAGAACAGACTACCCGTAAAGAAGATcc > 4:167106/1‑139 (MQ=255)
tGATTGTTGACCGTATCGTAGGCCGCCGCGTTCACGCGCCGTCTGGTCGTGGTTATCACGTTTAATTCAATCCGCCGAAAGTAGAAGGCAAAGACGAC‑GTTACCGGTGAAGAACTGACTTCCCGGAAAGACGCTCAgg > 2:985016/1‑138 (MQ=255)
tgttgACCGTATCGTAGGCCGCCGCGTTCACGCGCCGTCGGGGCGTGTTTATCACGTTAAATTCAATCCGCCGAAAGTAGAAGGCAAAGACGAC‑GTTACCGGTGAAGAACTGACTACCCGTAAAGACGATCAGGAaga < 1:1191302/138‑1 (MQ=255)
tgttgACCGTAGGGTAGGCCGCCGCGTTCACGCGCCGTCTGGGCGGGTTTAGCACGTTAAATTCAAACCGCCGAATGTAGAAGGCAACGACGAC‑GTTACCGGTGAAGAACTGACTACCCGTAAAGACGATCAGGAaga < 2:1249619/138‑1 (MQ=255)
tgtggACCGTATCGTAGGCCGCCGCGTTCACGGGCCGGCGGGTCGTGTTTATCACGTTAAATTCAATCCCCCGAAAGTAGAAGGCAAAGACGAC‑GTTACCGGTGAAGAACTGACTACCCGTAAAGACGATCAGGAAgaga < 8:931901/140‑1 (MQ=255)
ttgACCGTATCGTCGGCCGCCGGGTTCCCGCGCCGGCTGGTCGTGTTTATCCCGTAATATTCAATCCGCCTAAAGAAGAAGGAAACGACGAC‑GTTACCGGTGAAGAACTGACTACCCGTAAAGACGATCAGGAAGAGAcc < 6:336658/140‑1 (MQ=255)
ttgACCGTATCGTAGGCCGCCGCGTTCACGCGCCGTCTGGTCGTGGTTTTCACGTTAAATTCAATCCGCCGAAAGTTTAAGGCAAAGAAGAC‑GGTACCGGTGAAGCACTGCAGACCCGGAAAGCCGATCAGGAAGAGAcc > 4:428382/1‑140 (MQ=255)
gcccGTATCGTAGGCCTCCGCGTGCTCGCGCGGTCGGGTAGTTTTTATCACTTTAAATTAAATCCGCCGAAAGTAGAAGGCAAAGACGAC‑GTTACCGGTGAAGAACTGACTACCCGTAAAGACGATCAGGAAGAGAcc < 1:728852/136‑1 (MQ=255)
gACCGTATCGTAGGCCGCCGCGTTCACGCGCCGTCTGGTCGTGTTTTTGACGGTTAATTGAATCCGCCGAAAGTAGAAGGCAAAGAAGAA‑GTTACCGGGGAAGAACTTACTACCCGGAAAGACGATCAGGAAGAGACcgt > 8:186254/1‑140 (MQ=255)
acagTATCGTTGGCCGCCGCTTTCCCGCGCCGTGTGTTGGTGTTTATCACGTAAATTTCAACCCGCCTAAAGTATACGGAAAACACGAC‑GTTACCGGTGAAGAACTGACTACCCGTAAAGACGATCAGGAAGAGACcgta < 7:433687/137‑1 (MQ=255)
aTCGTAGGCCGCCGCGTTCACGCGCCGTCTGGTCGTGTTTTTCACGTTAAATTCAATCCGCCGAAAGTAGAATGCAAAGACGAC‑GTTACCGGTGAAGAACTGACTACCCGTAAAGACGATCAGGAAGAGACcgtacgt > 1:957318/1‑138 (MQ=255)
cGTAGGCCGCCGCGTTCACGCGCCGTCTGGTCGTGTTTATCACGGTATATTCAATCCGCCGAAAGTAGAAGGCAAAGACGAC‑GTTACCGGGGAAGACCGGCCTTCCCGTAAAGACGCTCAGGAAGAGCCCGTACGTaaaa > 8:662398/1‑139 (MQ=255)
tggCCGCCGGGTTCACGCGCCGTCTGGTCGTTTTTATCACGTTAAATTCAATCCGCCGAAATTAGACGGCAAAGACGAC‑GTTACCGGTGAAGAACTGACTACCCGTAAAGACGATCAGGAAGAGACCGTACGTAAACg < 1:752670/137‑1 (MQ=255)
cggCCGCCGGGTGCACGCGCGGTCTGGTCGTTGTTATCTCGTTAAATTCAAACCGCCCAAATTAGAAGGCAAATACGAC‑GTTACCGGTGAAGAACTGACTACCCGTAAAGACGATCAGGAAGAGACCGTACGTAAACGTc < 5:690955/139‑1 (MQ=255)
cggCCGCCGCGTACACGCGCCGTCTGGGCGTGTTTAGCACGTTAAATTCAATCCGCCGAAAGTAGAAGGCAAAGACGAC‑GTTACCGGTGAAGAACTGACTACCCGTAAAGACGATCAGGAAGAGACCGTACGTAAACGTc < 4:618846/139‑1 (MQ=255)
cgcccgctgCGTTCTCGCGCCGTTTGGGCGGGTTTATCACTTTAAATTCAATCCGCCTAATGTAGAAGGCAAAGACGAC‑GTTACCGGGGAAGAACTGACTACCCGTAAAGACGATCAGGAAGAGACCGTACGTAAACGTc < 8:499086/137‑1 (MQ=255)
cggcctcGTTCACGCGAGGACTGGTGGTGTTAATAACGTTAAATTCAAACCGCCGAATGTAGAAGTCAAAGACGAC‑GTTACCGGTGAAGAACTGACTACCCGTAAAGACGATCAGGAAGAGACCGTACGTAAACGTCt < 2:231985/136‑1 (MQ=255)
cgccgcGTTCACGCGCCGTCTGGTCGTGTTTATCACGTTAAATTCAATCCCCCGAAAGTATAATGCAAAGCCGCC‑GTTACCGGTGAAAGCCTGACTACCCGGAAAGCCGATCAGGAAGAGACCGTACGTAAACGGCTggg > 8:260128/1‑139 (MQ=255)
gccgcGTTCACGCGCCGTCTGGTCGTGTTTATCACGTTAAATTAAATCCGCCGAAAGTAGGAGGCAAAGACGAC‑GTTACCGGTGAAGAACTGACTACCCGGAAAGACGATCAGGAAGAGACCGTACGTAAACGTCTGGtt > 6:365189/1‑140 (MQ=255)
ccgcGTTCACGCGCCGTCTGGTCGTGGTTATCACGGTAAATTCACTCCGCCGAAAGTAGAAGGCAAAGACGAC‑GTTACCGGGGAAGGACGGACTACCCGTAAAGACGCTCAGGAAGAGCCCGTACGTAAACGTCTGGGTg > 6:746929/1‑140 (MQ=255)
ccgTCCACGCGCCGTCTGGTCGTGTTTATCAGGTTAAATTCAATCCGCCTAAATTAGACGGCAAAGACGAC‑GTTACCGGTGCAGAACTGACTACCCGTAAAGACGATCAGGAAGAGACCGTACGTAAACGTCTGGTTGaa < 5:194497/139‑1 (MQ=255)
ggTTCACGCGCGGGCTGGGCGTGTTTATCACTTTAAATTCAATCCGCCGAAAGTAGAAGGCAAAGACGAC‑GTTACCGGTGAAGAACTGACTACCCGTAAAGACGATCAGGAAGAGACCGTACGTAAACGTCTGGTTGAAt < 4:759172/139‑1 (MQ=255)
cggacACGCGCCGTCTGGGCGTTTTTATCACGTTAAATTCAATCCGCCTAAAGTAGAAGCCAAAGACGAC‑GTTACCGGTGAAGAACTGACTACCCGTAAAGACGATCAGGAAGAGACCGTACGTAAACGTCTGGTTGa < 2:982060/134‑1 (MQ=255)
cgTTCCCGCGCCGTGTGGTGGTGTTTATCCCTTTAAATTCAATCCGCCGAATGTATATGGCAAAGACGAC‑GTTACCGGTGAAGAACTGACTACCCGTAAAGACGATCAGGAAGAGACCGTACGTAAACGTCTGGTTGAAt < 8:805486/140‑1 (MQ=255)
cgTTCACGCGCCGTCTGGTCGTGTTTATCACGTTTAATTCAATCCGCCGAAAGTAGAAGGCAAAGACGAC‑GTTACCGGTGAAGAACTGACTACCCGTAAAGACGATCAGGAAGAGACCGTACGTAAACGTCTGGTTgt > 2:441688/1‑137 (MQ=255)
cgTTCACGCGCCGTCTGGTCGTGTTTATCACGGTAAATTCAATCCGCCGAAAGTAGAAGGCAAAGACGCC‑GTTACCGGGGAAGAACTGACTACCCGTAAAGACGCTCAGGAAGAGCCCGTACGTAAACGTCTGGTTGa > 2:1153267/1‑138 (MQ=255)
cgTTCACGCGCCGTCTGGTCGTGTTTATCACGGTAAATTCAATCCGCCGAAAGTAGAAGGCAAAGACGAC‑GTTACCGGTGAAGAACTGACTACCCGGAAAGACGATCAGGAAGAGACCGTACGTAAACGTCTGGTTGAAt > 6:878034/1‑140 (MQ=255)
cgTTCACGCGCCGTCTGGTCGTGTTTATAAAGGTAAATTCAATCCGCCGAAAGTAGAAGGCAAAGACGAC‑GGTACCGGTGAAGAACTGACTACCCGTAAAGACGCTCAGGTAGAGCCCGTACGTAAACGTCTGGTTgt > 2:1153273/1‑137 (MQ=255)
cgTTCACGCGCCGACTGGTCGTTTTTATAACGGAAAATTCAATCCGCCGAAAGTAGATGGCAAAGACGAC‑GTTACCGGGGAAGAACTGACTACCCGTAAAGACGATCAGGAAGAGACCGTACGTAAACGTCTGGTTGa < 2:137668/138‑1 (MQ=255)
cgTGCACGTGCCTTCTGGTCGTGTTTATCACTTTAAATTCAATCCGCCGAAAGTAGAAGGCAAAGACGAC‑GTTACCGGTGAAGAACTGACTACCCGTAAAGACGATCAGGAAGAGACCGTACGTAAACGTCTGGTTGAAt < 4:753328/140‑1 (MQ=255)
gcgcCGTCGGGTCGTGTTTATCACTTTAAATTCAATCCGCCGAACGGAGAAGGCAAAGACGAC‑GTTACCGGGGAATAACTGACTACCCGTAAAGACGATCAGGAAGAGACCGTACGTAAACGTCTGGTTGAATACCATCa < 3:110237/140‑1 (MQ=255)
gcgttCTGGTGGTGTTTATCACTTTAACTTCACACCGCCTAAAGTATAAGTAAAAGACGAC‑GTTACCGGTGAAGAACTGACTACCCGTAAAGACGATCAGGAAGAGACAGTACGTAAACGTCTGGTTGAATACCATCAGa < 3:295469/136‑1 (MQ=255)
cggTCGGGGCGTGTTTAGCACGTTAAATTCCTTCGGCCGAACGTCGAAGGCAAAGCCGAC‑GTTACCGGTGAAGAACTGACTACCCGTAAAGACGATCAGGAAGAGACCGTACGTAAACGTCTGGTTGAATACCATCAGAt < 6:719072/138‑1 (MQ=255)
ccGTCTTGTCGTGTTTATCACGTTAAATTCAATCCGACTAAATTAGAAGTCAAAGACGAC‑GTTACCTGTGAAGAACTGACTACCCGTAAAGACGATCAGGAAGAGACCGTACGTAAACGTCTGGTTGAATACAATCAGAt < 6:303090/140‑1 (MQ=255)
ccGTCTGGTCGTTTTTATCACGTTAAATTAAATCCGCCGAAATTATAAGCCAAAGACGAC‑GTTACCGGTGAAGAACTGACTACCCGTAAAGACGATCAGGAAGAGACCGTACGTAAACGTCTGGTTGAATACCATCAGAt < 8:813821/140‑1 (MQ=255)
ccGTCTGGTCGTGTTTATCACTTTAAATTCAATCCGCCCAAAGTAGACGGCAACCACGAC‑GTTACCGGTGAAGAACTGACTACCCGTAAAGACGATCAGGAAGAGACCGTACGTAAACGTCTGGTTGAATACCATCAg < 1:274689/138‑1 (MQ=255)
gTCTGGTCGTGTTTATCACGTTAAATTCAAACCGCCGAAAGTATAAGGCAAAGACGAC‑GTTTCCGGTGAAGAACAGACTACCCGTAAAGACGATCAGGAAGAGCCCGTAAGTAAACGTCTGGTTGAATACCATCAGAt > 2:40664/1‑138 (MQ=255)
tGGTCGGGTTTATCACGTTAAATTCAATCCGCCGAAAGTACAAGGCAAAGACGAC‑GTTACCGGTGAAGAACTGACTACCCGTAAAGACGATCAGGAAGAGACCGTACGTAAACGTCTGGTTGAATACCATCAGATGACTg < 8:738997/140‑1 (MQ=255)
tttATAACGTTAAAATAAATCCCCCGAAAGTAGAAGGCAAAGACGAC‑CTTAACGCTGAAGAACTTACTACCCGAAAAAACGATCAGGAATATACCGAACGTAAAACTATGGTTGAAAACCATCAGATGACAGCAACCCTg > 4:606675/1‑140 (MQ=255)
ttATCACGTTAAATTCAATCCGCCGAAAGTAGACGGCAAAGACGAC‑GTTACCGGTGAAGAACTGACTACCCGTAAAGACGATCAGGAAGAGACCGTACGTAAACGTCTGGTTGAATACCATCAGATGACTGCACCGCTGa < 8:523752/140‑1 (MQ=255)
aTCCCGTAAAATTAAATCCGCCGAACGTAGAAGGCAACGACGAC‑GTTACCGGTGAAGAACTGACTACCCGTAAAGACGATCAGGAAGAGACCGTACGTAAACGTCTGGTTGAATACCATCAGATGACTGCACCGCTGATc < 7:986782/140‑1 (MQ=255)
aTCACGTTAAATTCAATCCGCCGAAATTAGAAGGCAAAGACGAC‑GTTACCGGTGAAGAACTGACTACCCGTAAAGACGATCAGGAAGAGACCGTACGTAAACGTCTGGTTGAATACCATCAGATGACTGCACCGCTGa < 1:897393/138‑1 (MQ=255)
taaCGTTTAATTAAATCCGCCGCAAATAGAAGGCAAATACGAA‑GTTACCCGTGAAGAACAGACTACCCGTAAATAAGATAAGGAAGAGACCGTACGTAAAAATCTTGTTTAATAAAATAAGATTACTGCAACCCTgctag > 4:120014/3‑136 (MQ=255)
ttAAATTCAATCCGCCGAAAGTAGAAGGCAAAGACGAC‑GTTACCGGTGAAGAACTGACTACCCGTAAAGACGATCAGGAAGAGACCGTACGTAAACGTCTGGTTGAATACCATCAGATGACTGCACCGCTGATCGGctac > 7:839125/1‑140 (MQ=255)
tAAATTCAATCAGCCGAAAGTAGAAGGCAAAGACGAC‑GTTACCGGTGAAGAACTGACTACCCGTAAAGACGATCAGGAAGAGACCGTACGTAAACGTCTGGTTGATTACCATCAGATGACTGCACCGCTGATCGGctact > 5:11970/1‑140 (MQ=255)
aaTTCAATCCGCCGAAAGTAGAAGGCAAAGACGAC‑GTTACCGGTGAAGAACTGACTACCCGTAAAGACGATCAGGAAGAGACCGTACGTAAACGTCTGGTTGAATACCATCAGATGACTGCACCGCTGATCGGCtactac < 8:225022/140‑1 (MQ=255)
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AGACGCGATGAAAGAAGCGGGCATCAATGTTGATTACGTTCTGGAATTCGACGTACCGGACGAACTGATTGTTGACCGTATCGTAGGCCGCCGCGTTCACGCGCCGTCTGGTCGTGTTTATCACGTTAAATTCAATCCGCCGAAAGTAGAAGGCAAAGACGAC‑GTTACCGGTGAAGAACTGACTACCCGTAAAGACGATCAGGAAGAGACCGTACGTAAACGTCTGGTTGAATACCATCAGATGACTGCACCGCTGATCGGCTACTAC > NZ_CP022686/4056830‑4057097
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| Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
N/A
