Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A14 F36 I0 R1
|
271 |
6613.7 |
10404966 |
98.5% |
10248891 |
136.2 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
freq |
annotation |
gene |
description |
| RA |
NZ_CP022686 |
4,056,962 |
C→A |
22.0% |
F137L (TTC→TTA) |
adk → |
adenylate kinase |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NZ_CP022686 | 4,056,962 | 0 | C | A | 22.0%
| 227.0
/ 16.7
| 164 | F137L (TTC→TTA) | adk | adenylate kinase |
| Reads supporting (aligned to +/- strand): ref base C (25/93); new base A (29/13); total (58/106) |
| Fisher's exact test for biased strand distribution p-value = 7.44e-08 |
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 |
Only 100 of 167 total aligned reads displayed.
GCAGGCAGACGCGATGAAAGAAGCGGGCATCAATGTTGATTACGTTCTGGAATTCGACGTACCGGACGAACTGATTGTTGACCGTATCGTAGGCCGCCGCGTTCACGCGCCGTCTGGTCGTG‑TTTATCACGTTAAATTCAATCCGCCGAAAGTAGAAGGCAAAGACGACGTTACCGGTGAAGAACTGACTACCCGTAAAGACGATCAGGAAGAGACCGTACGTAAACGTCTGGTTGAATACCATCAGATGACTGCACCGCTGATCGGCTACTAC > NZ_CP022686/4056824‑4057097
|
caggcagACGCGATGAAAGAAGCGGGCATCAATGTTGATTACGTTCTGGAATTCGACGTACCGGACGAACTGATTGTTGACCGTATCGTAGGCCGCCGCGTTCACGCGCCGTCTGGTCGTG‑TTTATACCGttaaattaaa > 6:1211923/1‑140 (MQ=255)
caggcagACGCGATGAAAGAAGCGGGCATCAATGTTGATTACGTTCTGGAATTCGACGTACCGGACGAACTGATTGTTGACCGTATCGTAGGCCGCCGCGTTCACGCGCCGTCTGGTCGTG‑TTTATAACGGTAAATTcta > 1:653122/1‑138 (MQ=255)
gcagACGCGATGAAAGAAGCGGGCATCAATGTTGATTACGTTCTGGAATTCGACGTACCGGACGAACTGATTGTTGACCGTATCGTATGCCGCCGCGTTCACGCGCCGTCTGGTCTTG‑TTTTTAACCTTTAATTAAATcc > 1:312587/1‑140 (MQ=255)
gACGCGATGAAAGAAGCGGGCATCAATGATGCTTACGTTCTGGAATTCGACGTACCGGACGAACTGATTGTTGACCGTATCGTAGGCCGCCGCGGTCACGCGCCGTCTGGTCGTG‑GTTATCACGTTAAATTCAATccgcc < 1:815410/140‑1 (MQ=255)
cgcgATGAAAGAAGCGGGCATCAATGTTGATTACGTTCTGGAATTCGACGTACCGGACGAACTGATTGTTGACCGTATCGTAGGCCGCCGCGTTCACGCGCCGTCTGGTCGTG‑TTTATCACGTTAAATTCAATCCGCCGa < 2:1201372/140‑1 (MQ=255)
cgcgATGAAAGAAGCGGGCATCAATGTTGATTACGTTCTGGAATTCGACGTACCGGACGAACTGATTGTTGACCGTATCGTAGGCCGCCGCGGTCACGCGGCGTCTGGTCGTG‑TTTTTGACGGTAAATTGCATacgccgc > 5:196206/1‑139 (MQ=255)
tGAAAGAAGCGGGCATCAATGTTGATTACGTTCTGGAATTCGACGTACCGGACGAACTGATTGTTGACCGTATCGTAGGCCGCCGCGTTCACGCGCCGTCTGGTCGTG‑GTTATAACGGTAAATTTAATCCGCCGAAAGtt > 7:429435/1‑139 (MQ=255)
gCGGGCATCAATGTTGATTACGTTCTGGAATTCGACGTACCGGACGAACTGATTGTTGACCGTATCGTAGGCCGCCGCGTTCACGCGCCGTCTGGTCGTG‑TTTATCACGTTAAATTAAATCCCCCCAAAGTAGAAGGCaa > 4:929167/1‑140 (MQ=255)
gggCATCAATGTTGATTACGTTCTGGAATTCTAAGTACAGGACGAAATAATTATTGACCGTATCGTAGGCCGCCGCGTTCACGCGCCGTCTGGTCGTG‑TTTATCACGTTAAATTAAATCCGCCGAAAGTAGAAGGCaaat > 2:713143/1‑139 (MQ=255)
gaataaaTGTTGATTACGTTCTGGAATTCGACGTACCGGACGAACTGATTGTTGCCCGTATCGTCGGCCGCCGCGTTCACGCGCCGTCTGGTCGTG‑TTTATCACGTTAAATTCAATCCGCCGAAAGTAGAAGGCAAAgac < 6:1174855/135‑1 (MQ=255)
tGATTACGTTCTGGAATTCGACGTACCGGACGAACTGATTGTTGACCGTATCGTAGGCCGCCGCGTTCACGCGCCGGCTGGTCGTG‑TTTTTGACGTTAAATTCAAAACCGCGAAAGTATAAAGCAAACACGACGGTAcag > 5:764446/1‑138 (MQ=255)
aTTACGTTCTGGAATTCGACGTACCGGACGAACTGATTGTTGACCGTATCGTAGGCCGCCGCGTTCACGCGCCGTCTGGTCGTG‑TTTTTTAAGTTAAATTACATCCGCCGAAAGTAGAAGGCAAAGACGACGTTACCggg > 3:34872/1‑139 (MQ=255)
aTTACGTTCTGGAATTCGACGTACCGGACGAACTGATTGTTGACCGTATCGTAGGCCGCCGCGTTCACGCGCCGTCTGGTCGTG‑GTTATCCCGTTAAATTCAATCCGCCGAAAGTTGAAGGCAAAGACGACGTTTCCggg > 8:1035955/1‑139 (MQ=255)
aTTACGTTCTGGAATTCGACGTACCGGACGAACTGATTGTTGACCGTATCGTAGGCCGCCGCGGTCACGCGCCGTCTGGTCGTG‑GTTATAAAGGTAAATTAAAAACGCCGAAATTAGAAAGCAAAGCCGACGGTACAggg > 1:880408/1‑139 (MQ=255)
aTTACGTTCTGGAATTCGACGTACCGGACGAACTGATTGTTGACCGTATCGTAGGCCGCAGCCTTCACGCGCCGTCTGGTCGTG‑GTTCTCCCGGTAAATTCAATACGCCAAAAGTCGAAGGGAACGACGCCGGTACCggg > 3:618617/1‑139 (MQ=255)
ttACGTTCTGGAATTCGACTTACCGGACTAACTTTTTGTTGACGGTATCGTAGGCCGCCGCGTTCACGGGCCGTCTGGTCGTG‑TTTATCACGTTAAATTCAATCCGCCGAAAGTAGAAGGCAAAGACGACGTTACCGGTg < 5:791360/140‑1 (MQ=255)
gTTCTGGAATTCGACGTACCGGACGAACTGATTGTTGCCCGTATCGTAGGCCGCCGCGTTCACGCGCCGTCTGGTCGTG‑TTTATCACGTTAAATTAAATACGCCGAAAGTAGAAGGCAAATAAGACCTTACCGGTgaaga > 2:974142/1‑140 (MQ=255)
gTTCTGGAATTCGACGTACCGGACGAACTGATTGTTGACCGTATCGTAGGCCGCCGCGTTCACGCGCCGTCTGGTCGTG‑TTTATGAAGTTAAATTAAATCAGCCGAAAGTAGAAGGCAAAGACGACGTTACCGGTgaaga > 4:276899/1‑140 (MQ=255)
gTTCTGGAATTCGACGTACCGGACGAACTGATTGTTGACCGTATCGTAGGCCGCCGCGTTCACGCGCCGTCTGGTCGTG‑GTTATGACGTTAAATTCAATACGCCGAAATTTTAAGGCCAATACGATGGTTCCCGTgaaga > 2:1110958/1‑140 (MQ=255)
ttCTGGAATTCGACGTACCGGACGAACTGATTGTTGACCGTATCGTCGGCCCCCGCGTTCACGCGCCGTCTGGGCGTG‑TTTAACACGTTAAATTCAATCCCCCGAACGTCCAAGGCAAAGACGACGTTACCGGTgaagaa < 7:824270/140‑1 (MQ=255)
tCTGGAATTCGACGTACCGGACGAACTGATTGTTGACCGTATCGTAGGCCGCCGCGTTCACGCGCCGTCTGGTCGTG‑GTTATAACGTTTAATTCAATACCCCGAAATTAGAAGGCAAAGACGCCGTTACCGGTgaagaaa > 7:245867/1‑139 (MQ=255)
gAATTCGACGTACCGGACGAACTGATTGTTGACCTTATCGTCGGCCGCCGCGTTCACGCGCCGTCTGGTCGTG‑TTTATCACGTTAAATTCAATCCGCCGAAAGTAGAAGGCAAAGACGACGTTACCGGTGAAGAACTGAc < 6:1162465/140‑1 (MQ=255)
aaTTCGACGTACCGGACGAACTGATTGTTGACCGTATCGTAGGCCGCCGCGTTCACGCGCCGTCTGGTCGTG‑TTTATCACGTTAAATTCAATCCGCCGAAAGTAGAAGGCAAAGACGACGTTACCGGTGAAGAACTGACt < 1:247482/140‑1 (MQ=255)
aaTTCGACGTACCGGACGAACTGAGTGTTGACCGTATCGTAGGCCGCCGCGTTCACGCGCCGTCTGGGCGTG‑TTTATCACGTTAAATGAAATCCGCCGAAAGTCTAAGGCAACGACGACGTTACCGGTGAAGAACTGACt < 6:399474/140‑1 (MQ=255)
ttCGACGTACCGGACGAACTGATTGTTGACCGTATCGTAGGCCGCCGCGTTCACGCGCCGTCTGGTCGTG‑GTTTTCACGATTAATTAAATCCGCCGCAAGGAGAAGGCAAAGACGACCTTTCCGGGGTAGAACTGACTaa > 5:1018741/1‑139 (MQ=255)
cGACGTACCGGACGAACTGATTGTTGACCGTATCGTAGGCCGCCGCGTTCACGCGCCGTCTGGTCGTG‑TTTATCACCTTAAATTCAAAGCGCCGAAAGTAGAATGCAAATACGAAGGTACCGGTGAAGAAAGGACTAccc > 2:751888/1‑140 (MQ=255)
cGTACCGGACGAACTGATTGTTGACCGTATCGTAGGCCGCCGCGTTCACGCGCCGTATGGTCGTG‑GTTATCCCGGTAAATTAAATCCGCCGAAAGTATAAGGCAAAGCCGCCCTTACCGGAGAAGAACAGACTCCCCGTa > 8:1029129/1‑140 (MQ=255)
gTACCGGACGAACTGATTGTTGACCGTATCGTCGGCCGCCGCGTTCACGCGCCGTCTGGTCGTG‑TATATCAGGTTAAATTCAATCCGCCGAAAGTAGAAGCCAATGACGACGTTACCGGTGAAGAACTGACTACCCGTaa < 3:1070356/140‑1 (MQ=255)
tACCGGACGAACTGATTGTTGACCGTATCGTAGGCCGCCGCGTTCACGCGCCGGCTGGTCGTG‑GTTATCACGTTAAATTAAAAACGCCGAAAGTAGAAGGCAAAGACGACGGTACCGGGGAAGACCTGACTAccccgaaa > 2:477632/1‑135 (MQ=255)
aCCGGACGAACTGATTGTTGACCGTATCGTAGGCCGCCGCGTTCACGCGCCGTCTGGTCGTG‑TTTATCACCGGAAATTCAATGCGCCGAAAGTAGAAGGCAAAGACGACGTTACCGGGGAAGAACTGACTACCCGTAAAg > 6:1088945/1‑140 (MQ=255)
ccGGACTAACTGATTGTTGACCTGAGCGGTGGCCGCGGCGGTCCCGCGCGGTCTGGTGGTG‑TTTATCACGTTAAATTCAAGCCGCCGACAGTAGAAGGCAAAGACGACGTTACCGGTGAAGAACTGACTACCCGTAAAGa < 3:1191623/140‑1 (MQ=255)
ccGGACGAACTGTTTGTTGACCTTATCCTAGGCCGCCGCTTGCACGCGCTGTCTGGGGGTT‑TTTATCAGGTTAAATTCAATCCGCCGAAATTAGACGGAAAACACGACGTTACCGGTGAAGAACTGACTACCCGTAAAGa < 7:594974/140‑1 (MQ=255)
ccGGACGAACTGTTTGTTGACCGTATCGTAGGCCGCCGCTTTCACGCGCCGTCTGGTGGTG‑TTTATCATTTTAAATTCAATCCGCCCAAAGTAGATGTTAATCACGACGTTACCGGTGAAGAACTGACTACCCGTAAAGa < 5:2137/140‑1 (MQ=255)
ccGGACGAACTGATTGTTGACCGTATCGTAGGCCGCCGCGTTCACGCGCCGTCTGGTCGTG‑TTTATCACGTTAAATTCAATCCGCCGAAAGTAGAAGGCAAAGACGACGTTACCGGTGAAGAACTGACTACCCGTAAAGa < 7:745441/140‑1 (MQ=255)
ccGGACGAACTGATTGTTGACCGTATCGTAGGCCGCCGCGTTCACGCGCCGTCTGGTCGTG‑TTTATCACGTTAAATTCAATCCGCCGAAAGTAGAAGGCAAAGACGACGTTACCGGTGAAGAACTGACTACCCGTAAAGa < 1:1143240/140‑1 (MQ=255)
ccGGACGAACTGATTGTTGACCGTATCGTAGGCCGCCGCGTTCACGCGCCGTCTGGTCGTG‑TTTATCACGTTAAATTCAATCCGCCGAAAGTAGAAGGCAAAGACGACGTCACCGGTGAAGAACTGACTACCCGTAAAGa < 5:1089899/140‑1 (MQ=255)
cGGACTAACTGATTGTTGACCGTATCGTAGGCCGCCGCGTTCACGCGCCGTCTGGTCGTG‑TTTATCACGTTAAATTCAATCCGCCGAAAGTAGAAGGCAAAGACGACGTTACCGGTGAAGAACTGACTACCCGTAAAGAc < 7:940688/140‑1 (MQ=255)
cGGACGAACTGATTGTTGACCGTATCGTAGGCCGCCGCGTTCACGCGCCGTCTGGTCGTG‑TTTATAACGTTTAATTCAATACGCCGAAAGTAGAAGGCAAAGACGACGGTTCCGGTGAAGAACAGCCAACCCGGAAAGAc > 2:424860/1‑140 (MQ=255)
ggaggaACTGTTTGTTGACGGTATGGTAGGCCGCCGCGTTCACGCGCGTTCTGGTGGTG‑TTTATATCTTTAATTTAAAGCCGCGTAATGTATAAGGAAAAGACGACGTTACCGGTGAAGAACTGACTACCCGTAAAGACg < 5:1178310/140‑1 (MQ=255)
ggACGAACTGATTGTTGACCGTATCGTAGGCCGCCGCGTTCACGCGCCGTGTGGGCGTG‑TATATCACGTTAAATTAATTCCGCCTAATGTAGAAGGCAAAGACGACGTTACCGGTGAAGAACTGACTACCCGTAAAGACg < 3:435913/140‑1 (MQ=255)
ggACGAACTGATTGTTGACCGTATCGTAGGCCGCCGCGTTCACGCGCCGTCTGGTCGTG‑TTTATCACGTTTAATTAAATACCCCGAAAGTAGAAGGCAAAGACCACGTTAACGGGGAATAACTGACTAACCGTAAAGACg > 1:310992/1‑140 (MQ=255)
cctaccTGTTTGTTGCCCGTAGTGTAGGCCGCCGCGGTCACGCGCCGTCTGGGCGTG‑TTTATCAGGTTAAATTCAATCCGCCGAAAGTAGAAGGCAAAGACGACGTTACCGGTGAAGAACTGACTACCCGTAAAGACGAt < 2:772622/135‑1 (MQ=255)
ccGAATTGATTGTTGAGCGTATCGTTGGCCGCCGGGTTCAGGCGCCGTCTGGT‑GTGTTTTATAACGTTTAATTAAATCCTCCTAAAGTATACGGAAATGTCGACGTTACCGGTGAAGAACTTACTACCCGTAAAGACGAt < 2:351417/139‑1 (MQ=255)
actaaCTGATTGTTGACCGTATCGTAGGCCGCCGCGTTCACGGGCCGTCTGGTCGTG‑TTTATCACGTTAAATTCAATCCGCCTAAAGTAGAAGGCAAAGACGACGTTACCGGTGAAGAACTGACTACCCGTAAAGACGAt < 6:647595/137‑1 (MQ=255)
aCGAACTTATTGTTGACCGTATCGTAGGCCGCCGCGTTCACGCGCCGTCTGGTCGTG‑TTTATCACGTTAAATTCAATCCGCCGAAAGTAGAAGGCAAAGACGACGTTACCGGTGAAGAACTGACTACCCGTAAAGACGAt < 3:375938/140‑1 (MQ=255)
aCGAACTGATTGTTGCCCGTATCGTAGGCCGCCGCGTTAACGCGCCGTCTGGTCGTG‑TTTATCACTTTAAATTCAATCCGCCGAAATTATAAGGCAAAGACGACGTTACCGGTGAAGAACTGACTACCCGTAAAGACGAt < 6:1078837/140‑1 (MQ=255)
aCGAACTGATTGTTGACCGTATCGTCGGCCGCCGCTTGGCCGGGCGGGCTGGTCGTG‑TTAATCACGTTAAATTCAATCCGCCTAAAGTATAAGGCAAAGACGACGTTACCGGTGAAGAACTGACTACCCGTAAAGACGAt < 4:597608/140‑1 (MQ=255)
aCGAACTGATTGTTGACCGTATCGTAGGCCGCCGCGTTCACGCGCCGTCTGGTCGTG‑TTTATCACGTTAAATTCAATCCGCCGAAAGTAGAAGGCAAAGACGACGTTACCGGTGAAGAACTGACTACCCGTAAAGACGAt < 2:1299594/140‑1 (MQ=255)
ttGATTGTTTACCTTTTCGTTGGCCGCCGGTTTAACGGGCCGTCTGGTCGTG‑TTTATAACGTTAAATTAAATGCGCATAATGTTGATGGCAAAGACGACGTTACCGGTGAAGAACTGACTACCCGTAAAGACGATCAGGa < 1:589932/139‑1 (MQ=255)
ttaTTGGTGAAGGTATCGTTGGCCGCCGCGGTCACGCGCGGTCGGGTCGTG‑TTTATATCGTTAAATTATATCCGCCGAAAGTTGACGGCAAAGACGACGTTACCGGTGAAGAACTGACTACCCGTAAAGACGATCAGGaa < 2:1337032/138‑1 (MQ=255)
tgctggttgACCGTATCTTCGGCCGCCGCGTTCACGCGCCGTCTGGTCGTG‑TTTATCACGTTAAATTAAATCCGCCGAACGTAGAAGGCAAAGACGACGTTACCGGTGAAGAACTGACTACCCGTAAAGACGATCAGGaa < 1:1014964/135‑1 (MQ=255)
tGATTGTTGCCCGTTTCGTAGGCCGCCGCGTTCACGCGCCTTCTGGTCGTG‑TTTATCACGTTAAATTCAATCCGCCGAATGTAGAAGGCAAAGACGACGTTACCGGTGAAGAACTGACTACCCGTAAAGACGATCAGGaa < 2:925643/140‑1 (MQ=255)
tGATTGTTGACCGTATCGTTGGCCGCCGCGTTCAGGCGCCGTCTGGTCGTG‑TTTATCACGTTAAATTCAATCCGCCTAAAGTAGAAGGCAAAGACGACGTTACCGGTGAAGAACTGACTACCCGTAAAGACGATCAGGaa < 8:1133320/140‑1 (MQ=255)
tttgttgCCCGTATCGTAGGCCGCCGCGTTCACGCGCCGTGTGGTCGTG‑TTTATCCCGTTAATTTCAATCCGCCCAAAGTATAAGGCAAAGACGACGTTACCGGTGAAGAACTGACTACCCGTAAAGACGATCAGGAaga < 2:312587/139‑1 (MQ=255)
tgtggACCTTATCGTAGGCCGCCGCGTTCACGGGCCGTCTGGTCGTG‑TTTATCACGTAAAATTCAACCCGCCTAAAGTCTAAGGCAAACACGACGTTACCGGTGAAGAACTGACTACCCGTAAAGACGATCAGGAAgaga < 7:258957/140‑1 (MQ=255)
ttgACGGTATCGTAGGCCGCCGCGTTCACGCGCCGTGTGGGCTTG‑TTTACCACGTTAAATTCAATCCGCCGAAATTAGACGGAAACGACGACGTTACCGGTGAAGAACTGACTACCCGTAAAGACGATCAGGAAGAGAcc < 7:794029/140‑1 (MQ=255)
tgACCGTATCGTAGGCCGCCGCGTTCACGCGCCGTCTGGTCGTT‑TTTATCACGTTAAATTCAATCCGCCGAAAGTAGAAGGCAAAGACGACGTTACCGGTGAAGAACTGACTACCCGTAAAGACGATCAGGAAGAGACcg < 8:588822/140‑1 (MQ=255)
gACCGTATCGTAGGCCGCCGCGTTCACGCGCCGTCTGGTCGTG‑TTTATCACGTTAAATTCAATCCGCCGAAAGTAGAAGGCAAAGACGACGTTACCGGTGAAGAACTGACTACCCGTAAAGACg > 4:759952/1‑124 (MQ=255)
gACCGTATCGTAGGCCGCCGCGTTCACGCGCCGTCTGGTCGTG‑TTTATCACGTTAAATTCAATCCGCCGAAAGTAGAAGGCAAAGACGACGTTACCGGTGAAGAACTGACTACCCGTAAAGACg < 3:759952/124‑1 (MQ=255)
gACCGTATCGTAGGCCGCCGCGTTCACGCGCCGTCTGGTCGTG‑GTTATCACGTTTAATTAAAAACGCCGAAAGTAGAAGGCAAATACGACGGTTCCGGGGCATAACTGCCTACCCGTAAAGACGATCAGGTAGAGACcgg > 2:545045/1‑139 (MQ=255)
tttggTAGGCCGGCGCGTTCACGCGCCGTGTGTGGGTG‑TTTATCACTTTAATTTCAATCCGCCGAAATTAGAAGGAATAGACTACGTTACCGTTGAAGAACTGACTACCCGTAAAGACGATCAGGAAGAGACcgtacgta < 7:321974/136‑1 (MQ=255)
tATCGTAGGCCGCCGAGTTCACGCGCCGTCTGGTCGTG‑TTTTTGAAGTTTAATTAAATAAGCCGAAATTAGAATGAAAAAACGAAGTTTACGGTGGAGAACTTACTAACCGGAAAGAAGATAAGGAAGAGACcgtacgga > 8:274096/1‑138 (MQ=255)
cGTAGGCCGCCGCGTTCACGCGCCGTCTGGTCGTG‑TTTATCACGTTTAATTCAATACGCCGAAATTAGAAGGCAAATACGCCGGTAACGGTGAAGAACGGACTACCCGGAAAGACGATCAGGAAGATCCCGTACGTaaaa > 6:558104/1‑139 (MQ=255)
tggCCGCCGCGTTCACGCGCCGTCTGGTCGTG‑TTTATCACGTTAAATTCAATCCGCCTAAATTATAAGGCAAACACGACGTTACCGGTGAAGAACTGACTACCCGTAAAGACGATCAGGAAGAGACCGTACGTAAACGTc < 2:435365/139‑1 (MQ=255)
tggCCGCCGCGTTCACGCGCCGTCTGGTCGTG‑TTTATCACGTTAAATTCAATCCGCCGAAAGTAGAAGGCAAAGACGACGTTACCGGTGAAGAACTGACTACCCGTAAAGACGATCAGGAAGAGACCGTACGTAAACGTc < 2:1103432/139‑1 (MQ=255)
tggCCGCCGCGTTCACGCGCCGTCTGGTCGTG‑TTTATCACGTTAAATTCAATCCGCCGAAAGTAGAAGGCAAAGACGACGTTACCGGTGAAGAACTGACTACCCGTAAAGACGATCAGGAAGAGACCGTACGTAAACGTc < 4:399810/139‑1 (MQ=255)
gggCCGCCGCGTTCACGCGCCGTCTGGTCGTT‑TTTATCACTTTAAATTCAATCCGCCGAAAGTAGATGGCAAAGACGACGTTACCGGTGAAGAACTGACTACCCGTAAAGACGATCAGGAAGAGACCGTACGTAAACGTc < 6:764446/139‑1 (MQ=255)
cggCCGCCGCGTTCACGCGCCGTCTGGTCGTG‑TTTATCACTTTAAATTCAATCCGCCTAAAGTAGAAGGAAAAGACGACGTTACCGGTGCAGAACTGACTACCCGTAAAGACGATCAGGAAGAGACCGTACGTAAACGTc < 7:875677/139‑1 (MQ=255)
cggCCGCCGCGTTCACGCGCCGTCTGGTCGTG‑TTTATCACGTTAAATTCAATCCGCCGAAAGTAGAAGGCAAAGACGACGTTACCGGTGAAGAACTGACTACCCGTAAAGACGATCAGGAAGAGACCGTACGTAAACGTc < 6:443909/139‑1 (MQ=255)
ggccgcTTTCACGCGCCGTCTGGTGGGG‑TTTATCACGTTATATTCATTCCGCCTAAAGTAGATGGCAAATTCGACGTTACCGGTGAAGAACTGACTACCCGTAAAGACGATCAGGAAGAGACCGTACGTAAACGTCTGGt < 8:824049/139‑1 (MQ=255)
cgccgcGTTCACGCGCCGTCTGGTCGTG‑TTTATAACGTTAAATTCAAACCGCCGCAACTATAAGGGCAAGACGTCCTTTCAGTGGTATAACATACTTCACCATAAGACGATAGGGTACAGAACGAACGTAAACGTCAggg > 2:984353/1‑139 (MQ=255)
cgccgcGTTCACGCGCCGTCTGGTCGTG‑GTGATCACGTTAAATTCAAAACGCCGCAAGTATAACAGAAAGACGACGTTAACGTTTAAGAACTCACCAACCCTCAAGACGAACAGTATGACAACGTACGTAAACGTCAGGt > 6:82/1‑140 (MQ=255)
ccgcGTTCACGCGCCGTCTGGTCGTG‑TTTTTCACGGTAAATTCAATCCGCCGCAAGTAGAAGGCAAAGACGACGTTTCCGGTGAAGAACTGCCGACCCGTAAAGACGCTCAGGAAGATCCCGTACGTAAACGTCGGGttt > 6:864215/1‑139 (MQ=255)
ccgcGTTCACGCGCCGTCTGGTCGTG‑TTTATGAAGGTAAATTGAATCCGCCGAAAGTAGAAGGCAAAGACGACGTTTCCGGGTGAGAACTGACTACCCCTAAAGACGATAAGGTAGAGACCCTACGGTAACGTCTGGTTg > 8:669569/1‑140 (MQ=255)
cgcgTTCACGCGCCGTCTGGTCGTG‑TTTATCACGTTAAATTCAATCCGCCGAAAGTAGAAGGCAAAGACGACGTTACCGGTGAATAACTGACTAACCGTAAAGACGATCAGGAAGAGACCGTTCGTAAACGTCTGGTTgt > 4:380348/1‑139 (MQ=255)
gcgTTCACGCGCGGTCTGGTCGTG‑TTTATCACGTTAAATTCAATCCGCCGAAAGTAGAAGGCAAAGACGACGTTACCGGTGAAGAACTGACTACCCGTAAAGACGATCAGGAAGAGACCGTACGTAAACGTCTGGTTGaa < 1:533225/140‑1 (MQ=255)
gggtCACGCGCGGTGTGGTCGTG‑TTTATCACGTTAATTTCAATCCGCCTAATGTATAAGGCAATCACGACGTTACCGGTGAAGAACTGACTACCCGTAAAGACGATCAGGAAGAGACCGTACGTAAACGTCTGGTTGAAt < 7:664744/137‑1 (MQ=255)
ggTTCACGCGCGTGCTGGTCGTG‑TTTATCACGTTAAATTCAATCCGCCGAAAGTAGAAGGAAAAGACGACGTTACCGGTGAAGAACTGACTACCCGTAAAGACGATCAGGAAGAGACCGTACGTAAACGTCTGGTTGAAt < 5:565862/139‑1 (MQ=255)
ttCACGCGCCGGCTGGTGGTG‑TTTATCACTTTAAATACAAGCCGCCTAAAGTACAATGCAAAGACGACGTTACCGGTGAAGAACTGACTACCCGTAAAGACGATCAGGAAGAGACCGTACGTAAACGTCTGGTTGAATAc < 7:482602/140‑1 (MQ=255)
aCGCGCCGTCTGGTCGTG‑TTTATCATGTTAAATTAAATCCGCCTAAATTACAAGGCAAAGACGACGTTACCGGTGAAGAACTGACTACCCGTAAAGACGATCAGGAAGAGACCGTACGTAAACGTCTGGTTGAATACCAt < 6:888462/140‑1 (MQ=255)
gcgcCGTCTGGTCGTT‑TTTATCACGTTAAATTAAATCCGCCGAAAGAATAAGGCAACCACGACGTTACCGGTGAAGAACTGACTACCCGTAAAGACGATCAGGAAGAGACCGTACGTAAACGTCTGGTTGAATACCATCa < 8:643463/140‑1 (MQ=255)
ccGTCTGGTCGTG‑TTTATCACGTTAAATTCAATCCGCCGAAAGTAGAAGCCAAAGACGACGTTACCGGTGAAGAACTGACTACCCGTAAAGACGATCAGGAAGAGACCGTACGTAAACGTCTGGTTGAATACCATCAGAt < 8:1136722/140‑1 (MQ=255)
gTCTGGTCGTG‑TTTATCACGTTAAATTCAAACCGCCTAAAGTAGAAGGCAAACACGACGTTACCGGTGAAGAACTGACTACCCGTAAAGACGATCAGGAAGAGACCGTACGTAAACGTCTGGTTGAATACCATCAGATGa < 6:202733/140‑1 (MQ=255)
tGGTCGTG‑TTTATCACGTTAAATTCAATCCGCCGAAAGTAGAAGGCAAAGACGACGTTACCGGTGAAGAACTGACTACCCGTAAAGACGATCAGGAAGAGACCGTACGTAAACGTCTGGTTGAATACCATCAGATGACTg < 8:924713/140‑1 (MQ=255)
tGGTCGTG‑TTTATCACGTTAAATTAAATCCGCCGAAAGTATAAGCCAAAGACGACGTTACCGGTGAAGAACTGACTACCCGTAAAGACGATCAGGAAGAGACCGTACGTAAACGTCTGGTTGAATACCATCAGATGACTg < 1:415750/140‑1 (MQ=255)
ggggcGTG‑TTTATCACTTAAAATTCAATCCGCCGAAAGTAGAAGCAAAAGACGACGTTACCGGTGAAGAACTGACTACCCGTAAAGACGATCAGGAAGAGACCGTACGTAAACGTCTGGTTGAATACCATCAGATGACTg < 5:854965/136‑1 (MQ=255)
gcGTT‑TTTAACACGTTAAATTCAATCCGCCGAAAGTATAAGGCAAAGACGACGTTACCGGTGAAGAACTGACTACCCGTAAAGACGATCAGGAAGAGACCGTACGTAAACGTCTGGTTGAATACCATCAGATGACTGCAc < 2:1268261/139‑1 (MQ=255)
gcGTG‑TTTATCACGTTAAATTCAATCCGCCTAAAGTAGAAGGCAAAGACGATGTTACCGGTGAAGAACTGACTACCCGTAAAGACGATCAGGAAGAGACCGTACGTAAACGTCTGGTTGAATACCATCAGATGACTGCAc < 3:1043430/139‑1 (MQ=255)
gtg‑tTTATCCCGTTAAATTCAATCCGCCGACAGTTGAAGGCAAAGACGACGTTACCGGTGAAGAACTGACTACCCGTAAAGACGATCAGGAAGAGACCGTACGTAAACGTCTGGTTGAATACCATCAGATGACTGCACCg < 4:1211160/140‑1 (MQ=255)
tttttaaCGTTAAATTCAAAACGCCGAAATTAGAAGGCAAAGACCACGTTACCGGTGAAGAACTGCCTACCCGTAAAGCCGATCAGGAAGAGACCGTACGTAAAAGTCTGGTTGATTACCAACAGATGACTGCACCGCTg > 4:498232/7‑140 (MQ=255)
tttATCACGATAAATTCAATCCGCCGAAACTAGAAGGCAAAGACCACAGTACCGGTTAAGAACTGACTACCCGTAAAGACGATCAGGAAGAGACCGTAAGTAAACGTCTGGTTGAATCACAACAGATGCCTGAACCGCTg > 4:958452/1‑140 (MQ=255)
ttATCACTTTAATATCAATCCCCCGAATGACGAATGCAAAGACGACGTTACCGGTGAAGAACTGACTACCCGTAACGACGATCAGGATGAGACCGTACGTAAACGTCTGGTTGAATACCATCAGATGACTGCACCTCTGa < 7:141984/140‑1 (MQ=255)
ttATCACGTTAAATTCAATCCGCCGAAAGTAGAAGGCAAAGACGACGTTACCGGTGAAGAACTGACTACCCGTAAAGACGATCAGGAAGAGACCGTACGTAAACGTCTGGTTAAATACCATCAGATGACTGCACCGCTGa < 4:178558/140‑1 (MQ=255)
aTCACTTTAAATTCATTCCCCCGAAAGTAGAAGGCAAAGCCTACTTTACCGGTGAAGAACTGACTACCCGTAAAGACGATCAGGAAGAGACCGTACGTAAACGTCTGGTTGAATACCATCAGATGACTGCACCGCTGATc < 7:998203/140‑1 (MQ=255)
aCGTTAAATTCAATCCGCCGAAAGAAGAAGGCAAACACGACGTTACCGGTGAAGAACTGACTACCCGTAAAGACGATCAGGAAGAGACCGTACGTAAACGTCTGGTTGAATACCATCAGATGACTGCACCGCTGATCGGc < 3:868238/140‑1 (MQ=255)
tttAAATTCAATCCGCCTAAATTAGAAGCCAAAGACGACGTTACCGGTGAAGAACTGACAACCCGTAAAGACGATCAGGAAGAGACCGTACGTAAACGTCTGGTTGAATACCATCAGATGACTGCACCGCTGATCGGcta < 8:342379/139‑1 (MQ=255)
gTTAAATTCAATCCGCCGAAAGAAGACGGCAAAGACGACGTTACCGGCGAAGAACTGACTACCCGTAAAGACGAGCAGGAAGAGACCGTACGTAAACGTCTGGTTGAATACCATCAGATGACTGCACCGCTGATCGGcta < 5:1103307/140‑1 (MQ=255)
ttaaattaaaTCCGCCTAAAGTAGAAGGCAACCACGACGTTACCGGTGAAGAACTGACTACCCGTAAAGACGATCAGGAAGAGACCGTACGTAAACGTCTGGTTGAATACCATCAGATGACTGCACCGCTGATCGGctac < 4:456848/140‑1 (MQ=255)
ttAAATTCAATCCGCCGAAAGTAGAAGGCAAAGACGACGTTACCGGTGAAGAACTGACTACCCGTAAAGACGATCAGGAAGAGACCGTACGTAAACGTCTGTTTGAATACCATCAGATGACTGCACCGCTGATCGGctac > 8:16760/1‑140 (MQ=255)
taaaaTTCAATCCGCCGAAAGTAGATGGCAAAGACGACGTTACCGGTGAAGAACTGACTACCCGTAAAGACGATCAGGAAGAGACCGTACGTAAACGTCTGGTTGAATACCATCAGATGACTGCACCGCTGAGCGGctac < 1:751888/138‑1 (MQ=255)
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GCAGGCAGACGCGATGAAAGAAGCGGGCATCAATGTTGATTACGTTCTGGAATTCGACGTACCGGACGAACTGATTGTTGACCGTATCGTAGGCCGCCGCGTTCACGCGCCGTCTGGTCGTG‑TTTATCACGTTAAATTCAATCCGCCGAAAGTAGAAGGCAAAGACGACGTTACCGGTGAAGAACTGACTACCCGTAAAGACGATCAGGAAGAGACCGTACGTAAACGTCTGGTTGAATACCATCAGATGACTGCACCGCTGATCGGCTACTAC > NZ_CP022686/4056824‑4057097
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| Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
N/A
