Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A14 F13 I0 R1
|
159 |
9491.7 |
7979620 |
98.5% |
7859925 |
135.2 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
freq |
annotation |
gene |
description |
| RA |
NZ_CP022686 |
4,056,962 |
C→A |
15.1% |
F137L (TTC→TTA) |
adk → |
adenylate kinase |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NZ_CP022686 | 4,056,962 | 0 | C | A | 15.1%
| 188.4
/ 2.7
| 119 | F137L (TTC→TTA) | adk | adenylate kinase |
| Reads supporting (aligned to +/- strand): ref base C (27/66); new base A (16/7); total (45/74) |
| Fisher's exact test for biased strand distribution p-value = 5.55e-04 |
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 |
Only 100 of 120 total aligned reads displayed.
CAGGCAGACGCGATGAAAGAAGCGGGCATCAATGTTGATTACGTTCTGGAATTCGACGTACCGGACGAACTGATTGTTGACCGTATCGTAGGCCGCCGCGTTCACGCGCCGTCTGGTCGTGTTTATCACGTTAAATTCAATCCGCCGAAAGTAGAAGGCAAAGACGACGTTACCGGTGAAGAACTGACTACCCGTAAAGACGATCAGGAAGAGACCGTACGTAAACGTCTGGTTGAATACCATCAGATGACTGCACCGCTGATCGGCTACTAC > NZ_CP022686/4056825‑4057097
|
caggcagACGCGATGAAAGAAGCGGGCATCAATGTTGATTACGTTCTGGAATTCGACGTACCGGACGAACTGATTGTTGACCGTATCGTAGGCCGCCGCGGTCACGCGCCGTCTGGTCGTGGTTTTAACGTTTAATTaaa > 7:596787/1‑140 (MQ=255)
aggcagACGCGATGAAAGAAGCGGGCATCAATGTTGATTACGTTCTGGAATTCGACGTACCGGACGAACTGATTGTTGACCGTATCGTAGGCCGCCGCGTTCACGCGCCGTCTGGTCGTGTTTATCACGTTAAATTCAAt < 6:321665/140‑1 (MQ=255)
gACGCGATGAAAGAAGCGGGCATCAATGTTGATTACGTTCTGGAATTCGACGTACCGGACGAACTGATTGTTGACCGTATCGTAGGCCGCCGCGTTCACGCGCCGTCTGGTCGTGTTTATCACGTTAAATTCAATccg < 3:714598/138‑1 (MQ=255)
gAAAGAAGCGGGCATCAATGTTGATTACGTTCTGGAATTCGACGTACCGGACGAACTGATTGTTGACCGTATCGTAGGCCGCCGCGTTCACGCGCCGTCTGGTCGTGTTTATCACGTTAAATTCAATCCGCCGAAAGTAg < 8:935751/140‑1 (MQ=255)
gggCATCAATGTTGATTACGTTCTGGAATTCGACGTACCGGACGAACTGATTGTTGACCGTATCGTAGGCCGCCGCGTTCACGCGCCGTCTGGTCGTGTTTATGAAGTTAAATTCAATCCGCCGAAAGGAGAAGGCaa > 2:371287/1‑138 (MQ=255)
gggCATCAATGTTGATTACGTTCTGGAATTCGACGTACCGGACGAACTGATTGTTGACCGTATCGTAGGCCGCCGCGTTCACGCGCCGTCTGGTCGTGTTTATCACGTTAAATTAAATCCGCCGAAATTAGAAGGCaa > 1:35538/1‑138 (MQ=255)
gggCATCAATGTTGATTACGTTCTGGAATTCGACGTACCGGACGAACTGATTGTTGACCGTATCGTAGGCCGCCGCGTTCACGCGCCGTCTGGTCGTGTTTATAAAGTTAAATTCAATACGCCGCAAGTAGAAGGCaaaa > 6:761892/1‑139 (MQ=255)
gggCATCAATGTTGATTACGTTCTGGAATTCGACGTACCGGACGAACTGATTGTTGACCGTATCGTAGGCCGCCGCGTTCACGCGCCGTCTGGTCGTGGTTATCACGTTAAATTCAATCCGCCGCAAGTAGGAGGcca > 4:711030/1‑136 (MQ=255)
gCATCAATGTTGATTACGTTCTGGAATTCGACGTACCGGACGAACTGATTGTTGACCGTATCGTAGGCCGCCGCGTTCACGCGCCGTCTGGTCGTGTTTATCACGTTAAATTCAATCCGCCGAAAGTAGAAGGCAAAgac < 6:614749/140‑1 (MQ=255)
gCATAATTGTTGATTACGTTCTGGAATTCGACGTACCGGACGAACTGATTGTTGACCGTATCGTAGGCCGCCGCGTTCACGCGCCGTCTGGTCGTGTTTATCACGTTAAATTCAATCCGCCGAAAGTAGAAGGCAAAg < 1:347728/138‑1 (MQ=255)
tCAATGTTGATTACGTTCTGGAATTCGACGTACCGGACGAACTGATTGTTGACCGTATCGTAGGCCGCCGCGTGCACGCGCCGGCTGGTCGTGTTTATCACGTTAAATTCAATCCGCCGAAAGTAGAAGGCAAAgacg < 4:807719/138‑1 (MQ=255)
gTTGATTCCGTGCTGTAATTCGACGTACCGGACTAACTGATTGTTGACCGTATCGTAGGCCGCCGCGTTCACGCGCCGTCTGGTCGTGTTTATCCCGTTAAATTCATTCCGCCGAAAGTCGAAGGCAAAGACGACGTTAc < 8:859944/140‑1 (MQ=255)
gTTGATTACGTTCTGGAATTCGACTTACCGGACGAACTGATTGTTGACCGTATCGTAGGCCGCCGCGTTCACGCGCCGGCTGGTCGTGTTTATCACGTTAAATTCAATCCGCCGAAAGTAGACGGCAAAGACGACGtt < 4:273268/138‑1 (MQ=255)
gTTGATTACGTTCTGGAATTCGACGTACCGGACGAACTGATTGTTGACCGTATCGTAGGCCGCCGCGTTCACGCGCCGTCTGGTCGTGTTTATCACGTTAAATTCAATCCGCCGAAAGTAGAAGGCAAAGACGACGtt < 3:860737/138‑1 (MQ=255)
aTTACGTTCTGGAATTCGACGTACCGGACGAACTGATTGTTGACCGTATCGTAGGCCGCCGCGTTCACGCGCCGTCTGGTCGTGTTTATCACGTTAAATTCAATCCGCCGAAAGTAGAAGGCa > 5:335054/1‑123 (MQ=255)
aTTACGTTCTGGAATTCGACGTACCGGACGAACTGATTGTTGACCGTATCGTAGGCCGCCGCGTTCACGCGCCGTCTGGTCGTGTTTATCACGTTAAATTCAATCCGCCGAAAGTAGAAGGCa < 6:335054/123‑1 (MQ=255)
aTTACGTTCTGGAATTCGACGTACCGGACGAACTGATTGTTGACCGTATCGTAGGCCGCCGCGTTCACCCGCCGTCAGGTAGTGTTTTTAACGTTAAATTAAAACCGCCCAAAAAATAACGCAAAAACGACGTTTcccgg > 7:23383/1‑137 (MQ=255)
ttACGTTCTGGAATTCGACGTACCGGACGAACTGATTGTTGACCTTATCGTAGGCCGCCGCGTTCACGCGCCGTCTGGTCGTGTTTATCACGTTAAATTCAATCCGCCGAAAGTAGAAGGCAAAGACGACGTTACCgg < 2:840631/138‑1 (MQ=255)
tACGTTCTGGAATTCGACGTACCGGACGAACTGATTGTTGACCGTATCGTAGGCCGCCGCGTTCACGCGCCGTCTGGTCGTGTTTATGACGTTAAATTGAATCCCCCGAAAGTAGAATGCAAATACGACGTTACCggg > 2:911816/1‑137 (MQ=255)
tACGTTCTGGAATTCGACGTACCGGACGAACTGATTGTTGACCGTATCGTAGGCCGCCGCGTTCACGCGCCGTCTGGTCGTGATTATCACGTTAAATTCAATCCGCCGAAAGTAGAAGGCAAAGACGACGTTACCGGt > 4:68056/1‑138 (MQ=255)
tACGTTCTGGAATTCGACGTACCGGACGAACTGATTGTTGACCGTATCGTAGGCCGCCGCGTTCACGCGCCGTCTGGTCGGGGTTATAACGGTAAATTCAATACGCCGAAAGTAGAAGGCAAAGACGCCGTTACCggg > 1:280572/1‑137 (MQ=255)
tACGTTCTGGAATTCGACGTACCGGACGAACTGATTGTTGACCGTATCGTAGGCCGCCGCGTTCACGCGCCGTCGGGTCGTGTTTATCACGGTAAATTGAATACGCGCAAAGTAGCATGGAAAGACGTCGTTTCAGGt > 4:888666/1‑138 (MQ=255)
gTTCTGGAATTCGACGTACCGGACGAACTGATTGTTGACCGTATCGTAGGCCGCCGCGATCCCGCGCCGTCTGGGCGTGTTTATCACGTATAATTCAATACGCCGAAAGTAGCAAGCAAAGACGCGCTTAACGGTgaaga > 6:403692/1‑140 (MQ=255)
tCTGGAATTCGACGTACCGGACGAACTGATTGTTGACCGTATCGTAGGCCGCCGCGTTCACGCGCCGTCTGGTCGTGTTTTTCACGGTTAATTAAATACGCCGCAAATTTAAGGCAAAGACCACCTTACCGGGGAAGAAc > 8:48558/1‑140 (MQ=255)
tCTGGAATTCGACGTACCGGACGAACTGATTGTTGACCGTATCGTAGGCCGCCGCGTTCACGCGCCGTCTGGTCGTGTTTATCACGTTTAATTAAATACGCCGAAAGTATAAGGCAAAGACGACGTTACCGGTgaacaaa > 8:942019/1‑139 (MQ=255)
tCTGGAATTCGACGTACCGGACGAACTGATTGTTGACCGTATCGTAGGCCGCCGCGTTCACGCGCCGTCTGGTCGTGTTTATCACGTTAAATTCAATCCGCCGAAAGTAGAAGGCAAAGACGACGTTAc < 6:786632/129‑1 (MQ=255)
gAATTCGACGTCCCGGACGACCTGATTGTTGACCGTATCGTCGGCCGCCGCGTTCACGCGCCGTCTGGTCGTGTTTATCACGTAAAATTCAATCCGCCGAACGTAGACGGCAAAGACGACGTTACCGGTGAAGAACTGAc < 6:839160/140‑1 (MQ=255)
aaTTCGACGTACCGGACGAACTGATTGTTGACCTTATCGTAGGCCGCCGCGTTCACGCGCCGTCTGGGCGTGTTTATCACGTTAAATTCAATCCGCCCAAAGTAGAAGGCAACGACGACGTTACCGGTGAAGAACTGACt < 6:120389/140‑1 (MQ=255)
aaTTCGACGAACCGTACGAACTTATGGTTGACCGTATCGTAGGCCGCCGGGTTCACGCGCGGGCTGGTCGTGTTAATCACGTTAATTTCAATCCGCCGAATGTAGATGTAAAAGACGACGTTACCGGTGAAGAACTGa < 1:437845/138‑1 (MQ=255)
gACTTACCGGACTAACTGATTGTTGACCGTATCGTCGGCCGCCGCGTTCACGCGCCGTCTGGTCGTGTTTATCACTTTAAATTAAATCCGCCTAAAGTATAAGGCAAAGACGACGTTACCGGTGAAGAACTGACTACCCg < 7:35910/140‑1 (MQ=255)
gACGTACCGGACGAACTGATTGTTGACCGTATCGTAGGCCGCCGCGTTCACGCGCCGTCTGGTCGTGTTTATCACGTTAAATTCAATACGCCCAAACTAGAAGGCAAAGACGACCTTAACGGTGAAGAACGGACTAcc > 3:648766/1‑138 (MQ=255)
gTACCGGACTAACTGATTGTTGACCGTATCGTAGGCCGCCGCGTTCACGCGCCGTCTGGGCGTGTTTATCACGTTAAATTCAATCCGCCGAAAGTAGAAGGCAAAGACGACGTTACCGGTGAAGAACTGACTACCCGt < 4:358180/138‑1 (MQ=255)
tACCGGACTAACTGATTGTTGACCGTATCGTAGGCCGCCGCTTTCACGCGCCGTCTGGTCGTGTTTATCACGTTAAATTCAATCCGCCGAAAGTAGAAGGCAAAGACGACGTTACCGGTGAAGAACTGACTACCCGTa < 3:20677/138‑1 (MQ=255)
gagacataaCTGATTGTTGACCGTATCGTCGGCCGCCGCGTTCACGCGCCGTCTGGGCGTGTTTATCACGTTAAATTCAATCCGCCTAAAGTAGAAGGCAAAGACGACGTTACCGGTGAAGAACTGACTACCCGTAAAGa < 5:36274/133‑1 (MQ=255)
ccGGACGAACTGATTGTTGACCGTATCGTAGGCCGCCGCGTTCACGCGCCGTCTGGTGGTGTTTATCACTTTAAATTAAATCCGCCCAAAGTACAAGGAAAAGACGACGTTACCGGTGAAGAACTGACTACCCGTAAAGa < 6:676874/140‑1 (MQ=255)
ccGCACGAACGGATTGTTGACCGTATCGTAGGCCGCCGCGTTCACGCGCCGTCTGGTCGTTTTTATCACTTTAAATTCAATCCGCCGAAAGTATAAGGCAAAGACGACGTTACCGGTGAAGAACTGACTACCCGTaaa < 2:571780/138‑1 (MQ=255)
gtatgAAATGATTGTTGACCGTATGGTAGCCCGCCGCGTTCACGCGCCGTCTGGTCGTTTTTATCACGTTAAATTCAATCCGCCGAATTTAGAAGGAAAAGACGACGTTACCGGTGAAGAACTGACTACCCGTAAAGa < 1:836007/134‑1 (MQ=255)
ccGAACTGTTTGTTGACCGTATCGTAGGCCGCCGCGTTCACGCGCGGTCTGGTCTTGTTTATCACGTAAAATTCAATCCGCAGAAAGTAGAAGCCAAAGACGACGTTACCGGTGAAGAACTGACTACCCGTAAAGACg < 4:141431/137‑1 (MQ=255)
ccGAACTGATTGTTGACCGTATCGTCGGCCGCCGGGTTAACGCGCCGTGTGGTCTTGTTTATCACGTTAAATTCAATCCGCCTAAAGTATAAGGCAAAGACGACGTTACCGGTGAAGAACTGACTACCCGTAAAGACg < 3:9946/137‑1 (MQ=255)
actaattGATGGTTGACCGTTTGGTTGGCCGCCGCGTTCACGCGCGGTTTGGTGTTTTTTATCACGTTAATTTCAAGCCGCATAAAGTAGAAGGAAAAGACGACGTTACCGGTGAAGAACTGACTACCCGTAAAGACg < 1:123379/132‑1 (MQ=255)
actaagtGATTGTTGACCTTATCGTCGGCCGCCGCGTTCACGCGCCGTCTGGTCGTGTTTATCACGTTAAATTCAATCCGCCGAAAGTATAAGCCAACGACGACGTTACCGGTGAAGAACTGACTACCCGTAAAGACg < 1:124372/132‑1 (MQ=255)
aCGATCTGTTTGTTGCCCGTATTGTCGGGCGCGGGGTTCACGGGGCGTCTGGTCGTGTTTATCACGTTAAATTCAATCCGCCGAATGTAGAAGGCAATGACGACGTTACCGGTGAAGAACTGACTACCCGTAAAGACg < 2:338287/138‑1 (MQ=255)
aCGAAGTGATTGTTGACCGTATCGTCGGCCGCCGCGTGCACGCGCCGGCTGGTCGTGTTTATCACGTTAAATTAAATCCCCCGAAAGTAGAAGGCAACGACGACGTTACCGGTGAAGAACTGACTACCCGTAAAGACg < 1:350446/138‑1 (MQ=255)
aCGAACTTATTGTTGACCTTAGCGTTGGCCGCCGCGTTCACGCGCCGTCTGGGGGTGTTTATCACTTTAAATTAAATCCGCCGAAAGTAGACGGCAAAGACGACGTTACCGGTGAAGAACTGACTACCCGTAAAGACg < 4:6917/138‑1 (MQ=255)
aCGAACTGATTGTTCACCGTATCGTAGGCCGCCGCGTTCACGCGCCGTCTGGTCGTGTTTATCACGTTAAATTCAATCCGCCGAAAGTAGAAGCCAAAGACGACGTTACCGGTGAAGAACTGACTACCCGTAAAGACg < 3:519119/138‑1 (MQ=255)
aCTGATTGTTGACCGTATCGTAGGCCGCCGCGTTCACGCGCCGTCTGGTCGTGTTTATCACGGTAAATTCAATCCGCCGCAAGTAGAAGGCAAAGACGACGTTACCGGTGAAGAACTGACTACCCGGAAAGACGAGCa > 3:53762/1‑138 (MQ=255)
aCTGATTGTTGACCGTATCGTAGGCCGCCGCGTTCACGCGCCGTCTGGTCGTGGTTTTCACGTTAAAATAAAACCGCCGAAAGTAGAAGGCAAAGACCACGGTACCGGTGTAAAACGGAAAACCCCTAAATAACATCAgg > 7:567604/1‑140 (MQ=255)
tGATTGTTGACCGTATCTTAGGCCGCCGCGTTCACGCGCCGTCTGGGCGTGTTTATCACTTTAAATTCAATCCGCCGAAAGTAGAAGGCAAAGACGACGTTACCGGTGAAGAACTGACTACCCGTAAAGACGATCAGGaa < 7:328509/140‑1 (MQ=255)
tGATTGTTGACCGTATCGTAGGCCGCCGCGTTCACGCGCCGTCTGGTCGTGTTTATAACGATAAATTAAAGCCGCCGAAATTTTAAGTCCAAGACTACGTTAAAGGGGAACTACTGACTACCCGTAAAGCCGATCatg > 2:950589/1‑136 (MQ=255)
ctttttgACCGTTTCGTAGGCCGCCGCGTTCACTCGCCGTCTTGTCGTTTTTATCCCGTTAAATTCATTCCGCCTATAGTAGATTGCAAAGTCGACGTTACCGGTGAAGAACTGACTACCCGTAAAGACGATCAGGAaga < 7:704283/136‑1 (MQ=255)
aTTGTTGACCGTAGCGTAGGCCGCCGCGTTCACGCGCGGTCTGGTCGTGTTTATCACGTTAAATTCAATCCGCCGAAAGTAGAAGGCAAAGACGACGTTACCGGTGAAGAACTGACTACCCGTAAAGACGATCAGGAaga < 7:704281/140‑1 (MQ=255)
aTTGGTGACCTTTTCGTAGGCGTCCGCGTTCAGGCGCCGGCTGGTCTGGTTTATAACTTTAAATTCAATCCGCCTAAAGTAGCTGGCAAAGACGACGTTACCGGTGAAGAACTGACTACCCGTAAAGACGATCAGGAaga < 8:125043/140‑1 (MQ=255)
tgttgACCGTTTGGTTGGCCGCCGCGTTCATGGGGCGTGTGGTCGTGTTTATGACTTTAAATCATATCCGCCGAAAGTATAAGGCTATGACGACGTTACCGGTGAAGAACTGTCTACCCGTATAGACGATCAGGAaga < 2:992680/138‑1 (MQ=255)
tgttgACCGTATCGTAGGCCGCCGCGTTCACGCGCCGTCGGGTCGTGTTTATCACGTTAAATTCAATCCGCCGAAAGTAGAAGGCAAAGACGACGTTACCGGTGAAGAACTGACTACCCGTAAAGACGATCAGGAaga < 4:996281/138‑1 (MQ=255)
gACCGTATCGTAGGCCGCCGCGTTCACGCGCCGTCTGGTCGTGTTTATAACGTTAAATTAAATCCGCCGAAAGTATAAGGCAAAGCAGACGTTACCGGTGAAGAAATGACAACCCGTAAAGACGCTGAGGAagctgtctc > 6:36274/1‑133 (MQ=255)
cGTATCGTAGGCCGCCGCGTTCACGCGCCGTCTTGTCGTGTTTATCAAGTTAAATTCAATCCGCCGAAAGTAGAAGGCAAAGACGACGTTACCGGGGAAGAACTGACTACCCGTAAAGACGATCAGGAATAGACcgta > 4:400363/1‑138 (MQ=255)
cGTATCGTAGGCCGCCGCGTTCACGCGCCGTCTGGTCGTGTTTAACACGTTAAATTAAATCCGCCGAAAGTATAAGGCAAAGACGACGTTACCGGTGAAGAACTGACTACCCGTAAAGACGATCAGGAAGAGACcgta > 1:645759/1‑138 (MQ=255)
ttttCGTAGGCCGCCGCGTTCCCGCGCCGTCTGGTCGTGTTTTTCACGTTAAATTCAATCCGCCTAATGTAGAAGGCAACGACGACGTTACCGGTGAAGAACTGACTACCCGTAAAGACGATCAGGAAGAGACcgtacgt < 5:334583/137‑1 (MQ=255)
gTATCGTAGGCCGCCGCGTTCACGCGCCGTCTGGTCGTGTTTATCACGTTAAATTCAATCCGCCGa > 8:735551/1‑66 (MQ=255)
gTATCGTAGGCCGCCGCGTTCACGCGCCGTCTGGTCGTGGTTTTAACGGTTAATTAAATACGCCGAAAGTAGAAGGCAAAGACGCCGTTACCCGTGAAGAACTGCCTACCCCTAAAGACGATCAGGAAGAGACcgtacgt > 6:210668/1‑140 (MQ=255)
aTCGTGGGCCGCCGCGTTCACGCGCCGTCTGGTGTTGTTAAACACGTTAAAAACAAACCGCCGAACGATGAAGGCAAACACGACGTTACCGGTGAAGAACTGACTACCCGTAAAGACGATCAGGAAGAGACcgtacgt < 3:103173/138‑1 (MQ=255)
aTCGTAGGCCGCCGCGTTCACGCGCCGTCTGGTCGTGTTTATGACGTTAAATTAAATACGCCGAAAGTAGAAGGCAAAGACGACGTTTACGGTGAAGAACTGCCTACCCGTAAATACGCTCAGGAAGAGACcgtaact > 4:649752/1‑135 (MQ=255)
aTCGTAGGCCGCCGCGTTCACGCGCCGTCTGGTCGTGTTTATCACGTTAAATTAAATCCGCCGAAAGTAGAAGGCAAAGACGACGTGACCGGTGAATAACTGACTACCCGTAAAGACGATCAGGAAGAGACcgtacgt > 4:412349/1‑138 (MQ=255)
aTCGTAGGCCGCCGCGTTCACGCGCCGTCTGGTCGTGGTTATCACGTTAAATTCAATACGCCGAAAGTAGAAGGCAAAGACGACGTTACAGGTGAAGAACTGACTACCCGTAAATACGCTCAGGAAGAGACcgtacgt > 4:738182/1‑138 (MQ=255)
cggCCGCGGGGTTCAGGCGCCGTCTGGTCGTGTTTATCACGTTAAATTCAATCCGCCGAAAGTAGACGGCAAAGACGACGTTACCGGTGAAGAACTGACTACCCGTAAAGACGATCAGGAAGAGACCGTACGTAAACGTc < 5:576106/139‑1 (MQ=255)
cggCCGCCGGGTGCCCGCGCCTTCTGGTCGTGTTTTTCAGGTTAAATTCAATCCGCCGAAAGTCTAAGGAAACGACGACGTTACCGGTGAAGAACTGACTACCCGTAAAGACGATCAGGAAGAGACCGTACGTAAACGTc < 7:737175/139‑1 (MQ=255)
cggCCGCCGCTTTCACGCGCCGGCTGGTCGGGTTTATCACGTTAAATTCAATCCGCCTAAAGAAGAAGGCAACGACGACGTTACCGGTGAAGAACTGACTACCCGTAAAGACGATCAGGAAGAGACCGTACGTAAACg < 3:976204/137‑1 (MQ=255)
cggCCGACGCGTTCACGCGCCGGCTGGTCGTGTTTATCACGTTAAATTCAATCCGCCGAAAGTATAAGGCAAAGACGACGTTACCGGTGAAGAACTGACTACCCGTAAAGACGATCAGGAAGAGACCGTACGTAAACGTc < 8:387177/139‑1 (MQ=255)
aGGCCGCCGCGTTCACGCGCCGTCTGGTCGTGTTTATAACGTTTAATTAAATACGCCGAAAGTAGAAGGCAAAGACGACGTTACCGGTGAAGAACTGACTACCCGGAAAGACGATCAGGAAGAGACCGTACGTAAACGTc > 7:803203/1‑140 (MQ=255)
ccgccgCGTTCCCGCGCCGTCTGGTCGGGTTTATACCGTTAAATACAATCCGCCTAAAGTAGACGCCAAAGACGACGATACCGGTGAAGAACTGACTACCCGTAAAGACGATCAGGAAGAGACCGTACGTAAACGTCt < 1:122051/138‑1 (MQ=255)
ccgccgCGTCCACGCGCCGTCTGGTCGTGTTTATCAGGTTAAATTCAATCCGCCGAAAGTAGAAGGAAAAGACGACGTTACCGGTGAAGAACTGACTACCCGTAAAGACGATCAGGAAGAGACCGTACGTAAACGTCt < 3:15994/138‑1 (MQ=255)
cgccgcGTTCACGCGCCGTCTGGTCGTGTTTTTCACGTTAAATTCAATCCGCCGAAAGTAGAAGGCAAAGACGACGTTACCGGTGAATAACTGACTACCCGGTAAGACGATCATGAATAGGCCCTACGTAAACGTcgg > 3:755595/1‑136 (MQ=255)
ccgcGTTCACGCGCCGTCTGGTCGTGTTTATCACGTTAAATTCAATCCGCCGAAAGTAGAAGGCAAAGACGACGTTACCGGTGAAGAACTGACTACCCGTAAAGACGATCAGGAAGAGACCGTACGTAAACGTCTGGTTg > 6:566420/1‑140 (MQ=255)
cgcgTTCACGCGCCGTCTGGTCGTGTTTATCACGTTAAATTCAATCCGCCGAAAGTAGAAGGCAAAGACGACGt > 8:316435/1‑74 (MQ=255)
cgcgTTCACGCGCCGTCTGGTCGTGTTTATCACGTTAAATTCAATCCGCCGAAAGTAGAAGGCAAAGACGACGt < 7:316435/74‑1 (MQ=255)
cgcgTTCACGCGCCGTCTGGTCGTGTTTATCACGTTAAATTAAATCCGCCGAAAGTAGAAGGCAAAGACGACGTTACCGGTGAAGAACTGACTACCCGTAAAGACGATCAGGAAGAGACCGTACGTAAACGTCTGGtt > 4:525784/1‑138 (MQ=255)
cgcgTCCCCGCGCCGTCTGGTCGTGTGTAACACTTTAAATACACCCCCCCCAAAGTAGAAGCCAAACACGACGTTACCGGTGAAGAACTGACTACGCGTAAAGACGATCAGGAAGAGACCGTACGTAAACGTCTGGTTGa < 7:432684/140‑1 (MQ=255)
gcgTTCACGCGCCGTCTGGTCGTTTTTATCACGTTAAATTCAATCCGCCGAAATTAGAAGCCAAAGACGACGTTACCGGTGAAGAACTGACTACCCGTAAAGACGATCAGGAAGAGACCGTACGTAAACGTCTGGTTGaa < 8:803203/140‑1 (MQ=255)
gcgTTCACGCGCCGTCTGGTCGTGTTTATCACGTTAAATTCAATCCGCCGAAAGTAGAAGGCAAAGACGACGTTACCGGTGAAGAACTGACTACCCGTAAAGACGATCAGGAAGAGACCGTACGTAAACGTCTGGttt > 4:111819/1‑137 (MQ=255)
gcgTTCACGCGCCGTCTGGTCGTGTTTATCACGTTAAATTCAATCCGCCGAAAGTAGAAGGCAAAGACGACGTTACCGGTGAAGAACTGACTACCCGGAAAGACGATGAGGAAGAGACCGTACGTAAACGTCTGGTTg > 4:788669/1‑138 (MQ=255)
cgTTCACGGGCCGTCGGGTCGTGTTTATCACGTTAAATTCAATCCGCCGAAAGTATAAGGCAAAGACGACGTTACCGGTGAAGAACTGACTACCCGTAAAGACGATCAGGAAGAGACCGTACGTAAACGTCTGGTTGAAt < 8:728700/140‑1 (MQ=255)
ttCACGCGCCGGATGGTCGTTTTTATCCAGGTAAATTCAATCCGCCGAACGTCGAAGGAAAAGACGACGTTACCGGTGAAGAACTGACTACCCGTAAAGACGATCAGGAAGAGACCGTACGTAAACGTCTGGTTGAAt < 4:581649/138‑1 (MQ=255)
ggggcTGGGCGGGTTTATCCCGTTAATTTCAATCCCCCTAAAGTCGACGGCAAAGACGACGTTACCGGTGAAGCACTGACTACCCGTAAAGACGATCAGGAAGAGCCCGTACGTAAACGTCTGGTGGAATACCATCAg < 1:258761/134‑1 (MQ=255)
ccGTCTGGTCGTGTTTCTCCCTTTAAATTCAATCCCCCGAAAGTATACGGCAATCACGACGTTACCGGTGAAGAAATGACTACCCGTAAAGACGATCAGGAAGAGACCGTACGTAAACGTCTGGTTGAATACCATCAGAt < 5:969702/140‑1 (MQ=255)
ccGTCTGGTCGTGTTTATCACGTTAAATTAAATCCGCCGAAAGTAGAAGGCAAAGACGACGTTACCGGTGAAGAACTGACTACCCGTAAAGACGATCAGGAAGAGACCGTACGTAAACGTCTGGTTGAATACCATCAGAt < 5:566420/140‑1 (MQ=255)
gcGTGTTTATCACGTTAAATTCAATCCGCCGAAAGTAGAAGGCAAAGACGACGTTACCGGTGAAGAACTGACTACCCGTAAAGACGATCAGGAAGAGACCGTACGTAAACGTCTGGTTGAATACCATCAGATGACTGc < 4:147462/137‑1 (MQ=255)
tttATACCGTTAAATTCAATCCGCCGAAAGTAGAAGGCAAAGACGACGTTACCCGTGAAGCACTGACTAACCGTAAAGAAGATCAGGAAGAGACCGTACGTAAACGTCTGGTTGAATACCATCAGATGACTGCCCCGc > 4:984836/1‑138 (MQ=255)
ttATCACGTTAAATTCAATCCGCCTAAAGTAGAAGGCAAAGACGACGTTACCGGTGAAGAACTGACTACCCGTAAAGACGATCAGGAAGAGACCGTACGTAAACGTCTGGTTGAATACCATCAGATGACTGCACCGCt < 3:525784/138‑1 (MQ=255)
ataaCGTTAAATTCAACCCGCCGAACGTATAAGGAAAAGCCGACGTTACCGGTGAAGAACTGACTACCCGTAAAGACGATCAGGAAGAGACCGTACGTAAACGTCTGGTTGAATACCATCAGATGACTGCACCGCTGATc < 8:139742/137‑1 (MQ=255)
accACGTAAAATTCAATCCGCCGAACGTAGAAGGCAACCACGACGTTACCGGTGACGAACTGACTACCCGTAAAGACGATCAGGAAGAGACCGTACGTAAACGTCTGGTTGAATACCATCAGATGACTGCACCGCTGATc < 7:205251/138‑1 (MQ=255)
aTCACGTTAAATTCAATCCGCCGAAAGTACAAGCAAAACACGACGTTACCGGTGAAGAACTGACTACCCGTAACGACGATCAGGAAGAGACCGTACGTAAACGTCTGGTTGAATACCATCAGATGACTGCACCGCTGATc < 7:864605/140‑1 (MQ=255)
cACGTTAAATTCAATCCGCCGAAAGTAGAAGGCAAAGACGACGTTAACGGTGAATAACTTACTACCCATAAAGACGATCAGGAAGAGACCGTACGTAAACGTCTGGTTGCATACAATCAGATGACTGCACCGCTGATCgg > 8:8372/1‑140 (MQ=255)
cACGTTAAATTAAATCAGCCGAAAGTAGAAGGCAAAGACGACGTTACCGGTGAAGAACTGACTACCCGTAAAGACGATCAGGAAGAGACCGTACGTAAACGTCTGGTTGAATACCATCAGATTAATGCACCGCTGATAgg > 6:115825/1‑140 (MQ=255)
tttAAATTCAATCCGCCGAAAGTATATGGAAACGACGACGTTACCGGTGAAGAACTGACTACCCGTAAAGACGATCAGGAAGAGACCGTACGTAAACGTCTGGTTGAATACCATCAGATGACTGCACCGCTGATCGGcta < 5:210668/139‑1 (MQ=255)
tatAAATTCAATCCGCCGAAAGTAGATGCAAAACACGACGTTACCGGTGAAGAACTGACTACCCGTAAAGACGATCAGGAAGAGACCGTACGTAAACGTCTGGTTGAATACCATCAGATGACTGCACCGCTGATCGGc < 1:131668/136‑1 (MQ=255)
ttACATTTAATTCGGCGAATTTTGAAGGGAATCTCGCCGGTAACGGGGCAGTACTGATTTCCCGTAAACTCGATCACGAAGTGTCCGTACGTAAACCTCGGGGTGAATAACATCAGATGACTGCACCGCTGATCGGctac < 6:141585/140‑1 (MQ=255)
ttAAATTCAATCCGCCGAAAGTAGAAGGCAAAGACGACGTTACCGGTGAAGAACTGACTACCCGTAAAGACGATCAGGAAGAGACCGTACGTAAACGTCTGGTTGAATACCATCAGATGACTGCACCGCTGATCGGct > 1:906098/1‑138 (MQ=255)
ttAAATTCAAACCGCCGAAATTAGAAGGCAAAGACGACGTTACCGGTGAAGAACTGACTACCCGTAAAGACGATCAGGAAGAGACCGTACGTAAACGTCTGGTTGAATACCATCAGATGACTGCACCGCTGATCGGct < 3:155066/138‑1 (MQ=255)
aaaTTCAATCCGCCGAAAGTAGAAGGCAAAGACGACGTTACCGGTGAAGAACTGACTACCCGTAAAGACGATCAGGAAGAGACCGTACGTAAACGTCTGGTTGAATACCATCAGATGACTGCACCGCTGATCGGctac > 1:665095/1‑138 (MQ=255)
ttCAATCCGCCGAAAGTAGAAGGCAAAGACGACGTTACCGGTGAAGAACTGACTACCCGTAAAGACGATCAGGAAGAGACCGTACGTAAACGTCTGGTTGAATACCATCAGATGACTGCACCGCTGATCGGCtactac > 1:292562/1‑138 (MQ=255)
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CAGGCAGACGCGATGAAAGAAGCGGGCATCAATGTTGATTACGTTCTGGAATTCGACGTACCGGACGAACTGATTGTTGACCGTATCGTAGGCCGCCGCGTTCACGCGCCGTCTGGTCGTGTTTATCACGTTAAATTCAATCCGCCGAAAGTAGAAGGCAAAGACGACGTTACCGGTGAAGAACTGACTACCCGTAAAGACGATCAGGAAGAGACCGTACGTAAACGTCTGGTTGAATACCATCAGATGACTGCACCGCTGATCGGCTACTAC > NZ_CP022686/4056825‑4057097
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| Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
N/A
