Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A15 F35 I0 R1
|
275 |
15706.7 |
10805118 |
98.3% |
10621430 |
134.7 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
freq |
annotation |
gene |
description |
| RA |
NZ_CP022686 |
4,056,962 |
C→A |
10.9% |
F137L (TTC→TTA) |
adk → |
adenylate kinase |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NZ_CP022686 | 4,056,962 | 0 | C | A | 10.9%
| 257.7
/ 2.2
| 154 | F137L (TTC→TTA) | adk | adenylate kinase |
| Reads supporting (aligned to +/- strand): ref base C (20/103); new base A (17/7); total (44/110) |
| Fisher's exact test for biased strand distribution p-value = 2.38e-07 |
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 |
Only 100 of 157 total aligned reads displayed.
CGCAGGCAGACGCGATGAAAGAAGCGGGCATCAATGTTGATTACGTTCTGGAATTCGACGTACCGGACGAACTGATTGTTGACCGTATCGTAGGCCGCCGCGTTCACGCGCCGTCTGGTCGTGTTTATCACGTTAAATTCAATCCGCCGAAAGTAGAA‑GGCAAAGACGACGTTACCGGTGAAGAACTGACTACCCGTAAAGACGATCAGGAAGAGACCGTACGTAAACGTCTGGTTGAATACCATCAGATGACTGCACCGCTGATCGGCTACT > NZ_CP022686/4056823‑4057095
|
cGCAGGCAGACGCGATGAAAGACGCGGGCATCAATGTTGATTACGTTCTGGAATTCGACGTACCGGACGAACTGATTGTTGACCGTATCGTAGGCCGCCGCGTTCACGCGCCGTCTGGTCGTGTTTATCACGTTAAATTc < 8:1189717/140‑1 (MQ=255)
aggcagACGCGATGAAAGAAGCGGGCATCAATGTTGATTACGTTCTGGAATTCGACGTACCGGACGAACTGATTGTTGACCGTATCGTAGGCCGCCGCGTTCACGCGCCGTCTGGTCGTGTTTATCACGTTAAATTCa < 3:208838/138‑1 (MQ=255)
gcagACGCGAGGAAAGAAGCGGGCATCAATGTTGATTACGTTCTGGAATTCGACGTACCGGACGAACTGATTGTTGACCGTATCGTAGGCCGCCGCGTTCACGCGCCGTCTGGTCGTGGTTTTAACGTTTAATTGAAt > 2:506166/1‑138 (MQ=255)
agACGCGATGAAAGAAGCGGGCATCAATGTTGATTACGTTCTGGAATTCGACGTACCGGACGAACTGATTGTTGCCCGTATCGTAGGCCGCCCCGTTCACGCGCCGTCTGGTCGTGGTTATAACCGTAAATTaaaaca > 1:919970/1‑135 (MQ=255)
agACGCGATGAAAGAAGCGGGCATCAATGTTGATTACGTTCTGGAATTCGACGTACCGGACGAACTGATTGTTGACCGTATCGTAGGCCGCCGCGTTCACGCGCCGTCTGGTCGTGTTTATCACGTTAAATTCAATcc > 1:1212365/1‑138 (MQ=255)
cgcgATGAAAGAAGCGGGCATCAATGTTGATTTCGTTCTGGAATTCGACGTACCGGACGAACTGATTGTTGACCGTATCGTAGGCCGCCGCGTTCACGCGCCGTCTGGTCGTGTTTATCACGTTAAATTCAATccgcc < 4:657770/138‑1 (MQ=255)
gatagaagCGGGCATCAATGTTGATTACGTTCTGGAATTCGACGTACCGGACGAACTGATTGTTGACCGTATCGTAGGCCGCCGCGTTCCCGCGCCGTCTGGTCGTGTTTATCACGTTAAATTCAATGCGCCGAAAGTAg < 8:756777/137‑1 (MQ=255)
aaaGAAGCGGGCATCAATGTTGATTACGTTCTGGAATTCGACGTACCGGACGAACTGATTGTTGACCGTATCGTAGGCCGCCGGGTTCACGCGCCGTCTGGTCGTGGTTATCACGTTAAATTAAATCCGCCGAAAGtt > 1:269081/1‑137 (MQ=255)
aaaGAAGCGGGCATCAATGTTGATTACGTTCTGGAATTCGACGTACCGGACGAACTGATTGTTGACCGTATCGTAGGCCGCCGCGTTCACGCGCCGTCTGGTCGTGTTTATAACGTTTAATTAAATCCGCCGAAAGTa > 6:33388/1‑138 (MQ=255)
gCATCAATGTTGATTACGTTCTGGAATTCGCCGTCCCGGACGAAGTGATTGTTGCCCTTATCGTTGGCCGCCGCGTTCCCGCGCCGTCTGGTCGTGTTTATCACGTTAAATTCAATCGGCCGAATGTTGAA‑GGCAAAg < 2:1095006/138‑1 (MQ=255)
tttGATTACGTTCTGGAATTCGACGTACCGGACGAACTTATTGTTGACCGTATCGTAGGCCGCCGCGTTCACGCGCCGTCTGGTCGTGTTTATCACGTTAAATTCAATCCGCCGAAAGTAGAA‑GGCAAAGACGACGtt < 1:983044/137‑1 (MQ=255)
gTTGATTACGTTCTGTAATTCGCCGTACCGGACGAACTGATTGTGGACCGTATCGTAGGCCGCCGCGGTCCCGCGCCGTCGGGTCGTGTTTATCACGTTAAATTCAAACCGCCGAAAGTAGAA‑GGCAAAGACGACGtt < 6:497682/138‑1 (MQ=255)
aTTACGTTCTGGAATTCGACGTACCGGCCGAACTGATTGTTGACCGTATCGTAGGCCGCCGCGTTCACGCGCCGTCGGGTCGTGTTTATACCCTTAAAATGAAGAGCCCGAAAGTATTA‑GGCCAAGCCCCCGTTACCggg > 8:588563/1‑139 (MQ=255)
aTTACGTTCTGGAATTCGACGTACCGGACGAACTGATTGTTGACCGTATCGTAGGCCGCCGCGTTCACGCGCCGTCTGGTCGTGGTTATCACGTTAAATTAAATCCCCCGAAAGTAGAA‑AGCAAAAACGACCTTACCggg > 8:580922/1‑139 (MQ=255)
ttccGTTCTGTATTTCGACGTACCGGACGAACTGTTTGTGGACCGTATCGTTGGCCGCCGCTTGCACGGGCCGGCTGGTCGTGTTTATCCCGTTAAATCCAATCCGCCTAAAGTAGAC‑GGCAACGACGACGTTACCGGTg < 8:371715/137‑1 (MQ=255)
ttACGTTCTGGAATTCTACTTCCCGTACGACCTGATTGTTTACCGTATCGTAGGCCGCCGCGTTCACGCGCCGTCTGGTCGTGTTTATCACGTTAAATTCAATCCGCCTAAAGAAGAA‑GGAAAAGACGACGTTACCgg < 3:69446/138‑1 (MQ=255)
ttACGTTCTGGAATTCGACGTACCGGACGAACTGATTGTTGACCGTATCGTAGGCCGCCGCGTTCACGCGCCGTCTGGTCGTGTTTATCACGTTAAATTCAATCCGCCGAAAGTAGAA‑GGCAAAGACGACGTTACCgg < 5:543435/138‑1 (MQ=255)
tACGTTCTGGAATTCGACGTACCGGACGAACTGATTGTTGACCGTATCGTAGGCCGCCGCGTTCACGCGCCGTCTGGTCGTGTTTAAAACGTTAAAATGAATCCGCCGAAAGTAGAA‑TGCAAAGACGACGTTACCGGt > 4:571584/1‑138 (MQ=255)
gTTCTGGAATTCGACGTACCGGACGAACTGATTGTTGACCGTATCGTAGGCCGCCGCGTTCACGCGCCGTCTGGTCGTGTTTTTCACGTGAAATTAAAACCGCCGAAAGTAGAA‑GGCAAAGACGACGTTACCGGTgaaga > 8:13419/1‑140 (MQ=255)
ttCTGGAATTCGACGTACCGGACGAACTGATTGTTGACCGTATCGTAGGCCGCCGCGTTCACGCGCCGTCTGTTGGTGTTTATCACGTTAAATTCAATCCGCCGAAATTAGAA‑GGCAAAGACGACGTTACCGGTgaag < 4:1108411/138‑1 (MQ=255)
tCTGGAATTCGACGTACCGGACGAACTGATTGTTGACCGTATCGTAGGCCGCCGCGTTCACGCGCCGTCTGGTCGTGTTTATAACGTTTAATTAAAACCGCCGAAAGTTGAA‑GGCAAAGACGACGTTACCGGTgaaga > 3:1145529/1‑138 (MQ=255)
tCTGGAATTCGACGTAACGGACGAACTGATTGTTGACAGTATCGTAGGCCGCCGCGTTCACGCGCCGTCTGTTCGTGTTTATCACGTTAAATTCAAAACCCCGAAAGTATAA‑GGCAAATAAGACCTTAAAGGTgaaga > 5:1314797/1‑138 (MQ=255)
tGGAATTCTACGTACCGGACGAACTGATTGTTGACCGTATCGTAGGCCGCCGCGTTCACGCGCCGTCTGGTCGTGTTTATAACGTTAAATTAAATACGCCGAAAGTAGAA‑TGCAAAGACGCCGTTAACTGTggagcaa > 6:1262906/1‑135 (MQ=255)
tGGAATTCGACGTACCGGACGAACTGATTGTTGCCCGTATCGTAGGCCGCCGCGTTCACGCGCCGTCTGGTCGTGTTTATAAAGTTTAATTAAATACGCCGAAAATATAATGGCAAA‑ACGCAGTTAACGGTtcagaaa > 6:1262912/1‑137 (MQ=255)
tGGAATTCGACGTACCGGACGAACTGATTGTTGACCGTATAGTAGGCCGCCGCGTTCACGCGCAGTCTGGTCGTGTTTAACACGTTAAATTAAATCCGCCGCAAGTAGAA‑GGCAAATAAGACGTTAACGGTgaagaag > 4:857858/1‑137 (MQ=255)
taaTTCGACGTACCGGACGAACTGATTGTTGACCGTATCGTAGGCCGCCGCGTTCACGCGCCGTCTGGTCGTGTTTATCACGTTAAATTCAATCCGCCGAAAGTACAA‑GGCAAAGACGACGTTACCGGTGAAGAACTGAc < 7:983382/139‑1 (MQ=255)
taaTTCGACGTACCGGACGAAATGATTGTTGACCGTATCGTAGGCCGCCGCGTTCACGCGCCGTCTGGTCGTGTTTATCACGTTAAATTCAATCCGCCGAAAGTCGAC‑GGCAACGACGACGTTACCGGTGAAGAACTg < 1:1083108/137‑1 (MQ=255)
aaTTCGACGAACCGGACGAACTGATTGTTGACCGTATCGTAGGCCGCCGCGTTCACGCGCCGTCTGGGCGTGTTTATCACGTTAAATTCAATCCGCCGAAAGTAGAC‑GGCAAAGACGACGTTACCGGTGAAGAACTGa < 6:211807/138‑1 (MQ=255)
aCGTACCGGACGAACTGATTGTTGACCGTATCGTAGGCCGCCGCGTTCACGCGCCGTCTGGTCGTGTTTATGACGTTAAATTAAATACGCCGAAACTAGAA‑TGCAAAGAAGACGGTAACAGTGTAGAACTGTCTAccc > 1:1046140/1‑138 (MQ=255)
aCGTACCGGACGAACTGATTGTTGACCGTATCGTAGGCCGCCGCGTTCACGCGCCGTCTGGTCGTGTTTATCACGTTTAAATAAATCCGCCGAAAGTAGAA‑AGGAAAGACGAACTTAACGGTGAAGAACAGACTAccc > 6:169739/1‑138 (MQ=255)
aCGTACCGGACGAACTGATTGTTGACCGTATCGTAGGCCGCCGCGTTCACGCGCCGTCTGGTCGTGGTTTTCACGTTTAATTAAATACGCCGAAAGTAGAA‑GGCAAAAACGCCGGTACCGGGGAAGAACTGACTAccc > 3:920091/1‑138 (MQ=255)
cGTACCGGACGAACTGATTGTTGACCGTATCGTAGGCCGCCGCGTTCACGCGCCGTCTGGTCGTGGTTATAACGTTAAATTCAATACGCCGAAAGTAGAA‑GGCAAAGACCGCGTTACCGGTGCAGAACTGACAACCCGTa > 7:180822/1‑140 (MQ=255)
cGTACCGGACGAACTGATTGTTGACAGTAGCGTAGGCCGCCGCGTTCACGCGCCGTCTGGTCGTGTTTATCACGTTAAATTCAATCCGCCTAAAGTATAA‑GGAAAAGACGACGTTACCGGTGAAGAACTGACTACCCg < 4:1074895/138‑1 (MQ=255)
ttACCGGACGAACTGATTGTTGACCGTATCGTAGGCCGCCGCGTTCACGCGCCGTCTGGTCGTGTTTATCACGTTAAATTCAATCCGCCGAAAGTAGAA‑GGCAAAGACGACGTTACCGGTGAAGAACTGACTACCCGt < 5:566795/137‑1 (MQ=255)
ccGTACGAACTGATTGTTGACCTTATCGTAGGCCGCCGCGTTCACGCGCGGTCTGGGCGTGTTTATCACGTTAATTTCAATCCGCCTAAAGTATAA‑GGCAAAGACGACGTTACCGGTGAAGAACTGACTACCCGTaaa < 4:864929/138‑1 (MQ=255)
ccGGACGAACTGTTTGTTGACCGTATCGTAGGCCGCCGCGTTCCCGCGCCGGTTGGTCGTGTTTATCACGTTAAATACAATCCGCCGAAAGTAGAC‑GGCAAAGACGACGTTACCGGTGAAGAACTGACTACCCGTAAAGa < 7:171143/140‑1 (MQ=255)
ccGGACGAACTGATTGTTGACCGTATCGTAGGCTGCCGCGTTCACGCGCCGTCTGGTCGTGTTTATCACGTTAAATTCAATCCGCCGAAAGTAGAA‑GGCAAAGACGACGTTACCGGTGAAGAACTGACTACCCGTAAAGa < 8:15010/140‑1 (MQ=255)
ccGGACGAACTGATTGTTGACCGTATCGTAGGCCGCCGCGTTCACGCGCCGTCTGGTCGTGTTTATCACGTTAAATTCAATCCGCCGAAAGTAGAC‑GGCAAAGACGACGTTACCGGTGAAGAACTGACTACCCGTaaa < 4:1315091/138‑1 (MQ=255)
ccGGACGAACTGATTGTTGACCGTATCGTAGGCCGCCGCGTTCACGCGCCGTCTGGTCGTGGTTATAACGTTAAATTCAATACGGCGCAAGTAGAA‑GGCCAAGACGCCGTTACACGTGAAGAACTTCCTAACCGGaaa > 6:677247/1‑138 (MQ=255)
ccGGACGAACTGATTGTGGACCGTATCGTAGGCCGCCGCGTTCACGCGCCGTCTGGTCGTGTTTATCACGTTAAATTCAATCCGCCTAAAGTAGAC‑GGCAAAGACGACGTTACCGGTGAAGAACTGACTACCCGTaaa < 2:1367959/138‑1 (MQ=255)
ggACGAACTGATTGTTTACCGTATCGTAGGCGGCCGCGTTCACGCGCCGTCTGGTCTTTTTTATCACGTTAAATTCAATCCGCCGAAAGTATAA‑GGAAAACACGACGTTACCGGTGAAGAACTGACTACCCGTAAAGa < 1:564175/138‑1 (MQ=255)
ccGAACTGATTGTTGACCGTATCGGAGGCCGCCGCGTTCACGCGCCGTCTGGTCGTGTTTATCACGTTAAATTCAATCCGCCGAAAGTAGAA‑GGCAAAGACGACGTTACCGGTGAAGAACTGACTACCCGTAAAGACg < 2:1095930/137‑1 (MQ=255)
aCGAACTGATTGTTGACCGTATCGTAGGCCGCCGCGTTCACGCGCCGTCTGGTCGTGTTTATCACGTTAAATTCAATCCGCCGAAAGTAGAA‑GGCAAAGACGACGTTACCGGTGAAGAACTGACTACCCGTAAAGACg < 4:760211/138‑1 (MQ=255)
aCGAACTGATTGTTGACCGTATCGTAGGCCGCCGCGTTCACGCGCCGTCTGGACGTGTTTATCACGTTAAATTCAATCCGCCTAAAGTAGAA‑GGCAAAGACGACGTTACCGGTGAAGAACTGACTACCCGTAAAGACg < 6:954501/138‑1 (MQ=255)
tttgttgACCGTAGCGTAGGCCGCCGCGTGCACGCGCCGTGTGGTCGTGTTTATCACGTTAAATTCAATCCGCCGAAAGTAGAA‑GGAAAAGACGACGTTACCGGTGAAGAACTGACTACCCGTAAAGACGATCAGGaa < 1:353851/137‑1 (MQ=255)
tgttgACCGTATCGTAGGCCGCCGCGTTCACGCGCCGTCTGGTCGTGTTTATAAAGTTAAATTAAATACCCCCAAAATAGAA‑TGCAAAGACCACGGTAACCGTGAAGAACTGACAACCCGTAAATACGCACAGGCAtaga > 7:1132231/1‑140 (MQ=255)
tttgACCGTAACGTAGGCCGCCGCGTTCACGGGCCGTCTGGTCTTTTTTATCACTTTAAATTCAATCCGCCGAAAGTAGAC‑GTAATTGACGACGTTACCGGTGTAGAACTGACTACCCGTAAAGACGATCAGGAagag < 1:659579/137‑1 (MQ=255)
ttgACCGTATCGTTGGCCGCGGGGTTCACGCGCCGTCTGGTCGTTTTTATCACTTTAATTTCAATCCGCCTAAAGTAGAC‑GGAAAAGACGACGTTACCGGTGAAGAACTGACTACCCGTAAAGACGATCAGGAAgaga < 1:636405/138‑1 (MQ=255)
tgACCGTATCGTAGGCCGCCGCGTTCCCGCGCCGTCTGGTAGTGTTTATCACGGTAAATTCAAAACGCCGAAATTAGAA‑GGCAAAGACGCCGGTACCGGTGAAGAACTGACTACCCGTAAAGACGATCAGGAATAGAccc > 8:926100/1‑139 (MQ=255)
gACCGTATCGTAGGCCGCCGCGTTCACGCGCCGTCTGGTCGTGTTTATCACTTTAAATTCAATCCCCCGAAAGTAGAC‑GGCAAAGACGACGTTACCGGTGAAGAACTGACTACCCGTAAAGACGATCAGGAAGAGAcc < 2:21025/138‑1 (MQ=255)
ccGTATCGTAGGCCGCCGCGTTCACGCGCCGTCTGGTCGTGTTTATCACGTTTAAATCAATCCGCCGAAAGTAGAA‑GGCAAAGACGCCGTTACCGGTGAAGAACTGACTACCCGGAAAGACGATCAGGAATAGAccct > 2:1192960/1‑136 (MQ=255)
gTATCGTAGGCCGCCGCGTTCACGCGCCGTCTGGTCGTGTTTTTAACGTTAAATTAAATCCGCCGAAAGGAGCA‑GGCAAAGACGACGTTACCCGTGAAGAACTGACTACCCCTTAATCAGAGCAGGAAGAGTCcgtacgg > 7:446832/1‑139 (MQ=255)
ttCGTAGGCCGCCGCGTTCACGCGCCGTCTGGTCGTGTTTATCACGTTAAATTCAATCCGCCCAAAGTAGAC‑GGCAACGACGACGTTACCGGTGAAGAACTGACTACCCGTAAAGACGATCAGGAAGAGACcgtacgt < 5:859939/137‑1 (MQ=255)
aTCGTAGGCCGCCGCGTTCACGCGCCGTCTGGTGGTGTTTATCACGTTAAATTCAATCCGCCGAACGTAGAA‑GGCAAAGACGACGTTACCGGTGAAGAACTGACTACCCGTAAAGACGATCAGGAAGAGACcgtacgt < 2:1144500/138‑1 (MQ=255)
aTCGTAGGCCGCCGCGTTCACGCGCCGTCTGGTCGTTTTTATCACGTTAAATTCAATCCGCCTAATGTAGAA‑GGCAAAGACGACGTTACCGGTGAAGAACTGACTACCCGTAAAGACGATCAGGAAGAGACcgtacgt < 5:365823/138‑1 (MQ=255)
aTCGTAGGCCGCCGCGTTCACGCGCCGTCTGGTCGTGTTTATCACTTTAAATTCAATCCGCCGAAAGTATAA‑GGCAAAGACGACGTTACCGGTGAAGAACTGACTACCCGTAAAGACGATCAGGAAGAGACcgtacgt < 2:252081/138‑1 (MQ=255)
aTCGTAGGCCGCCGCGTTCACGCGCCGTCTGGTCGTGTTTATCACGTTAAATTCAATCCGCCGAAAGTAGAA‑GGCAAAGACGACGTTACCGGTGAAGAACTGACTACCCGTAAAGa < 4:59538/116‑1 (MQ=255)
aTCGTAGGCCGCCGCGTTCACGCGCCGTCTGGTCGTGTTTATCACGTTAAATTCAATCCGCCGAAAGTAGAA‑GGCAAAGACGACGTTACCGGTGAAGAACTGACTACCCGTAAAGa > 3:59538/1‑116 (MQ=255)
ttAGGCCTCCTCGTTCACGGGCCGTCTGGTCGTGTTTATCACTTTAAATTCAATCCGCCGAAATTAGAA‑CGAAAACACGACGTTACCGGTGAAGAACTGACTACCCGTAAAGACGATCAGGAAGAGACCGTACGTaaa < 5:635118/137‑1 (MQ=255)
tggCCGCCGGGTTCACGCGCCGTCTGGTCGTGTTTATCACGTTAAATTCAATCCGCCGAAATTAGAC‑GGCAAAGACGACGTTACCGGTGAAGAACTGACTACCCGTAAAGACGATCAGGAAGAGACCGTACGTAAACg < 2:608018/137‑1 (MQ=255)
tggCCGCCGCGTTCACGCGCCGTCTGGTCGTTTTTAACACGTTAAATTCAATCCGCCTAAAGTTGAA‑GGCAAAGACGACGTTACCGGTGAAGAACTGACTACCCGTAAAGACGATCAGGAAGAGACCGTACGTAAACg < 3:360392/137‑1 (MQ=255)
tggCCGCCGCGTTCACGCGCCGTCTGGTCGTGTTTTTCACGTTAAATTCAATCCGCCGAAAGTAGAA‑GGCAAAGACGACGTTACCGGTGAAGAACTGACTACCCGTAAAGACGATCAGGAAGAGACCGTACGTAAACg < 3:798728/137‑1 (MQ=255)
tggCCGCCGCGTTCACGCGCCGGCTGGTCTTGTTTATCAGGTTAAATTCACTCCGCCTAATTTAGAA‑GGCAAAGACGACGTTACCGGTGAAGAACTGACTACCCGTAAAGACGATCAGGAAGAGACCGTACGTAAACg < 5:977742/137‑1 (MQ=255)
gggCCGCCGCGTTCTCGCGCGGTCTGGTTGTGTTTAACCAGTTATTTTCAAGCCGCCGAATGAAGAA‑GGAAAAGACGACGTTACCGGTGAAGAACTGACTACCCGTAAAGACGATCAGGAAGAGACCGTACGTAAACg < 1:212720/137‑1 (MQ=255)
cggCCGCCGCGTTCCCGCGCCGGCGGGGCGTGTTTATCACGTTAAATTCAATCCCCCGAAAGTATAC‑GGCAACGACGACGTTACCGGTGAAGAACTGACTACCCGTAAAGACGATCAGGAAGAGACCGTACGTAAACg < 1:653759/137‑1 (MQ=255)
cggCCGCCGCGTTCACGGGCGGTCTGGTCGTGTTTATCACGTTAAATTCAATCCGCCGAAAGTAGAC‑GGCAAAGACGACGTTACCGGTGAAGAACTGACTACCCGTAAAGACGATCAGGAAGAGACCGTACGTAAACg < 5:674938/137‑1 (MQ=255)
agaccgccgCGTGCACCAGCCGTCTTGTCGTGTTTATCACTTTAAATTAAATCCGCCAAAATTAGAA‑GGAAAAGACGACGTTACCGGTGAAGAACTGACTACCCGTAAAGACGCTCAGGAAGAGACCGTACGTAAACGTc < 7:95666/137‑1 (MQ=255)
ccgccgCGTTCACGCGCCGTCTGGTCGTGTTTATCACGTTAAATTCAATCCGCCGAAAGTAGAA‑GGCAAAGACGACGTTACCGGTGAAGAACTGACTACCCGTAAAGACGATCAGGAAGAGACCGTACGTAAACGTCt < 4:147091/138‑1 (MQ=255)
ccgccgCGTCCACGCGCGGTCTGGGCGTGTTTTTCACGTTAAATTCAATCCGCCGAAAGTAGAA‑GGCAACGACGACGTTACCGGTGAAGAACTGACTACCCGTAAAGACGATCAGGAAGAGACCGTACGTAAACGTCt < 6:789828/138‑1 (MQ=255)
ccgcGTTCCCGCGCCGTCTGGTCGTGTTTATCACGTTAAATTCAATCCGCCGAAAGTAGAA‑GGCAAAGACGCCGTTACCGGGGGAGCACTGGCTACCCGGAAATACGATAAGGAAGAGACCGTACGTAAACGTCTGGttt > 8:1107630/1‑139 (MQ=255)
ccgcGTTCACGCGCCGTCTGGTCGTGTTTATCACGTTAAATTGAATCCGCCGAAAGTAGAA‑GGCAAATACGACGTTACCGGTGAATCACTGAATACCCCTAAAGACGATAAGGAAGAGACAGTACGTAAACGTATGGttt > 7:1053016/1‑139 (MQ=255)
cgcgTTCCCGCGCCGTCTGGTCTTGTTTATCACGTTAAATTCAATCCGCCGAAAGTAGAA‑GGCAAAGACGACGTTACCGGTGAAGAACTGACTACCCGTAAAGACGATCAGGAAGAGACCGTACGTAAACGTCTGGtt < 4:758782/138‑1 (MQ=255)
cgcgTGCACGCGCCGTCTGGTCGTGTTTAACAGTTTAAATTCAATCCGCCGAAAGTATAA‑GCCAAAGACGACGTTACCGGTGAAGAACTGACTACCCGTAAAGACGATCAGGAAGAGACCGTACGTAAACGTCTGGtt < 1:1065677/138‑1 (MQ=255)
gcgTTCACGCGCGGTGTGGTCGTGTTTATCAGGTTAAATTCAATCCGCCGAATGTATAA‑GGCAAAGACGACGTTACCGGTGAAGAACTGACTACCCGTAAAGACGATCAGGAAGAGACCGTACGTAAACGTCTGGTTg < 5:33388/138‑1 (MQ=255)
gcgTTCACGCGCGGTCTGGTCGTGTTTATCACTTTAATTTCAATCCGCCTAATTTATAA‑GCAAAAGACGACGTTACCGGTGAAGAACTGACTACCCGTAAAGACGATCAGGAAGAGACCGTACGTAAACGTCTGGTTg < 5:712028/138‑1 (MQ=255)
gcgTTCACGCGCCGTCTGGTCGTGTTTTTGAAGTTAAATTCAATCCGCCGATAGTATAA‑GGGAAAGACGACGTTACCGGTGAAGAACTGACTAACCGGAAAGACGATAAGGAAGAGACCGTACGTAAACGTATGGttt > 4:1214942/1‑137 (MQ=255)
gcgTTCACGCGCCGTCTGGGCGTGTTTATCACGTTAAATTCAATCCGCCGAAAGTAGAA‑GGCAAAGACGACGTTACCGGTGAAGAACTGACTACCCGTAAAGACGATCAGGAAGAGACCGTACGTAAACGTCTGGTTGaa < 8:433268/140‑1 (MQ=255)
cgTTCACGCGCCGTCTGGTCGTGTTTATGACGGTAAATTCAATACGCCGAAAGTAGAA‑GGCAAAGACGACGGTACCGGTGAAGAACTGACTACCCGTAAATACGCTCACGAAGAGACCCTACGTAAACGTCATGTTGa > 6:712028/1‑138 (MQ=255)
ttaaCGCGCCGTTTGGTTGTGTTTATCACTTTAATTTCAATCCGCCTAAAGTAGAC‑GGCAAAGACGACGTTACCGGTGAAGAACTGACTACCCGTAAAGACGATCAGGAAGAGACCGTACGTAAACGTCTGGTTGAAt < 5:24096/135‑1 (MQ=255)
ttCAGGCGCGGTCTGGTCGTGTTTATAAGGTTAAATTAAATCCGCCGAAAGTATAA‑GGCAAAGACGACGTTACCGGTGAAGAACTGACTACCCGTAAAGACGATCAGGAAGAGACCGTACGTAAACGTCTGGTTGAAt < 5:1157631/138‑1 (MQ=255)
ttCACGCGCGGTCTGGTCGTGTTTATCACGTTAAATTCAAACCGCCGAAAGTAGAA‑GGAAAAGACGACGTTACCGGTGAAGAACTGACTACCCGTAAAGACGATCAGGAAGAGACCGTACGTAAACGTCTGGTTGAAt < 2:6346/138‑1 (MQ=255)
ttCACGCGCCGTCTGGTCGTGTTTATCACGTTAAATTCAATCCGCCGAAAGTAGAC‑GGCAACGACGACGTTACCGGTGAAGAACTGACTACCCGTAAAGACGATCAGGAAGAGACCGTACGTAAACGTCTGGTTGAAt < 4:598414/138‑1 (MQ=255)
ttCACGCGCCGTCTGGTCGTGTTTATCAATTTAAATTCAATCCGCCGACTTTAGAT‑GGCAACGAGGACGTTACCGGTGAAGAACTGACTACCCGTAAAGACGATCAGGAAGAGACCGTACGTAAACGTCTGGTTGAAt < 5:1078359/138‑1 (MQ=255)
ttCACGCGCCGTCGGGTCGTTTTTATCCCTTAAAATGCAATCCCCCCAATGTCGAT‑GGAAAAGACGACGTTACCGGTGAAGAACTGACTACCCGTAAAGACGATCAGGAAGAGACCGTACGTAAACGTCTGGTTGAATAc < 7:835084/140‑1 (MQ=255)
tccccgcgCCGTAGGGTGGTTTTTATCAGGTTAAATACATTCCGACGAATGTAGAA‑GTAAAAGACGACGTTACCGGTGAAGAACTGACTACCCGTAAAGACGATCAGGAAGAGACCGTACGTAAACGTCTGGTTTAAt < 5:340751/134‑1 (MQ=255)
ccGTCTGGTCGTGGTTATCACGGTAAATTCAATCCGCCGAAAGTAGAA‑GGCAAAGACGACGTTACCGGTGCAGAACTGACTACCCGGAAAGGCGATCAGGCATAGACCGTACGTAAACGTCTGGGTGAATACCATCAGAt > 7:394669/1‑140 (MQ=255)
ccGTCTGGTCGGGTTTATCACGTTAAATTCAATCCGCCGAAAGTAGAA‑GGCAAAGACGACGTTACCGGTGAAGAACTGACTACCCGTAAAGACGATCAGGAAGAGACCGTACGTAAACGTCTGGTTGAATACCATCAg < 2:989187/138‑1 (MQ=255)
gTCGTGTTTATCACTTTAAATTCAATCCGCCGAACGTCGAA‑GGCAAAGACGACGTTACCGGTGAAGAACTGACTACCCGTAAAGACGATCAGGAAGAGACCGTACGTAAACGTCTGGTTGAATACCATCAGATGACTg < 4:392901/138‑1 (MQ=255)
gTCGTGTTTATCACGATAAAATAAATCCGCCGAAAGTAGAA‑GGCAAAGAAAACGTTACCGGGGAACAACAGACTACCCCTAAAAAAGATCAGGAAGAGACCGTACGTAAACGTCAGGTTTAATAACATCAAAAGAcag > 4:527909/1‑136 (MQ=255)
tttATCACGTTAAATTCAATCCGCCGAAAGTAGAA‑GGCAAAGACGACGTTACCGGTGAAGAACTGACTACCCGTAAAGACGATCAGGAAGAGACcgt > 8:837865/1‑97 (MQ=255)
aTCCCGTTAAATGCAAACCGCCGAACGTAGAA‑GCCAACGACGACGTTACCGGTGAAGAACTGACTACCCGTAAAGACGATCAGGAAGAGACCGTACGTAAACGTCTGGTTGAATACCATCAGATGACTGCACCGCTGa < 2:877322/138‑1 (MQ=255)
aTCACGTTAAATTCAATCCGCCGAAAGTCGAA‑GCCAACGACGACGTTACCGGTGAAGAACTGACTACCCGTAAAGACGATCAGGAAGAGACCGTACGTAAACGTCTGGTTGAATACCATCAGATGACTGCACCGCTGATc < 8:194957/140‑1 (MQ=255)
aCGTTAAATTCAATCCGCCGAAAGTAGAA‑GCAAAAGACGACGTTACCGGTGAAGAACTGACTACCCGTAAAGACGATCAGGAAGAGACCGTACGTAAACGTCTGGTTGAATACCATCAGATGACTGCACCGCTGATCGGc < 7:299452/140‑1 (MQ=255)
tttAAATTCAATCCGCCTAAAGTAGAA‑GGCAAAGACGACGTTACCGGTGAAGAACTGACTACCCGTAAAGACGATCAGGAAGAGACCGTACGTAAACGTCTGGTTGAATACCATCAGATGACTGCACCGCTGATCGGc < 3:1230939/137‑1 (MQ=255)
ttaaaaTACAATCCGCCGAAAGTAGAC‑GGAAAACACGACGTTACCGGTGAAGAACTGACTACCCGTAAAGACGATCAGGAAGAGACCGTACGTAAACGTCTGGTTGAATACCATCAGATGACTGCACCGCTGATCGGc < 5:169739/135‑1 (MQ=255)
ttAAATTCAATCCGCCGAAAGTTTAT‑GCCAAAGACGACGTTACCGGTGAAGAACTGACTACCCGTAAAGACGATCAGGATGAGACCGTACGTAAACGTCTGTTTGAATACCATCAGATGACTGCTCCGCTGATCGGct < 6:555125/138‑1 (MQ=255)
tAAATTCAATCCGCCGAAAGTAGAA‑GGCAAAGACGACGTTACCGGTGAAGAACTGACTACCCGTAAAGACGATCAGGAAGAGACCGTACGTAAACGTCTGGTTGAATACCATCAGATGACTGCACCGCTGATCGGctact > 7:437527/1‑140 (MQ=255)
tAAATTCAATCCGCCGAAAGTAGAA‑GGCAAAGACGACGTTACCGGTGAAGAACTGACTACCCGTAAAGACGATCAGGAAGAGACCGTACGTAAACGTCTGGTTGAATACCATCAGATGACTGCACCGCTGATCGGcta > 3:857208/1‑138 (MQ=255)
tAAATTCAATCCGCCGAAAGTAGAA‑GGCAAAGACGACGTTACCGGTGAAGAACTGACTACCCGTAAAGACGATCAGGAAGAGACCGTACGTAAACGTCTGGTTGAATACCATCAGATGACTGCACCGCTGATCGGcta > 6:668231/1‑138 (MQ=255)
aaTTCATTCCGCCGAAAGTAGAA‑GGCAAAGACGACGTTACCGGTGATGAACTGACTACCCGTAAAGACGATCAGGAAGAGACCGTACGTAAACGTCTGGTTGAATACCATCAGATGACTGCACCGCTGATCGGctact < 4:654078/138‑1 (MQ=255)
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CGCAGGCAGACGCGATGAAAGAAGCGGGCATCAATGTTGATTACGTTCTGGAATTCGACGTACCGGACGAACTGATTGTTGACCGTATCGTAGGCCGCCGCGTTCACGCGCCGTCTGGTCGTGTTTATCACGTTAAATTCAATCCGCCGAAAGTAGAA‑GGCAAAGACGACGTTACCGGTGAAGAACTGACTACCCGTAAAGACGATCAGGAAGAGACCGTACGTAAACGTCTGGTTGAATACCATCAGATGACTGCACCGCTGATCGGCTACT > NZ_CP022686/4056823‑4057095
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| Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
N/A
