Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A9 F2 I0 R1
|
193 |
6708.0 |
8620653 |
98.5% |
8491343 |
136.3 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
freq |
annotation |
gene |
description |
| RA |
NZ_CP022686 |
4,368,341 |
T→G |
8.3% |
D47A (GAC→GCC) |
ybiY ← |
glycyl‑radical enzyme activating protein |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NZ_CP022686 | 4,368,341 | 0 | T | G | 8.3%
| 272.1
/ 2.4
| 149 | D47A (GAC→GCC) | ybiY | glycyl‑radical enzyme activating protein |
| Reads supporting (aligned to +/- strand): ref base T (53/79); new base G (13/3); total (67/82) |
| Fisher's exact test for biased strand distribution p-value = 2.55e-03 |
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 |
Only 100 of 150 total aligned reads displayed.
GGGCAGCAGTCGGTTAGCGCCGTAAAATGCTCCGGGGTTAACTTTTCCCGATGAATAAGCAAACCATTCAACGCGCGCTCAATCACTTCCGGTGCGGTCTTAGCGCACAGCTTACAGCCTTCCAGACAGAGTCGTGGGTCATACAGCAGATCCTGCGTGCGGGCGCGGCTTTCCGGGTTCTGACACCAGCGGCAGCCCAGCGAACAGCCTTTAAGAAATACGACCGTGCGGA‑TACCGGGGCCATCATGGGTCGAGTAGCGTTGAATATTGAA > NZ_CP022686/4368203‑4368474
|
gggCAGCAGTCGGTTAGCGCCGTAAAATGCTCCGGGGTTAACTTTTCCCGATGAATAAGCAAACCATTCAACGCGCGCTCAATCACTTCCGGTGCGGTCTTAGCGCACAGCTTACAGCCTTCCAGACAGAGTCGTGGGTc < 6:326577/140‑1 (MQ=255)
ggCAGCAGTCGGTTAGCGCCGTAAAATGCTCCGGGGTTAACTTTTCCCGATGAATAAGCAAACCATTCAACGCGCGCTCAATCACTTCCGGTGCGGTCTTAGCGCACAGCTTACAGCCTTCCAGACAGAGTCGTGGGTcg > 1:755454/1‑139 (MQ=255)
gcagcaGTCGGTTAGCGCCGTAAAATGCTCCGGGGTTAACTTTTCCCGATGAATAAGCAAACCATTCAACGCGCGCTCAATCACTTCCGGTGCGGTCTTAGCGCACAGCTTACAGCCTTCCAGACAGAGTCGTGGGTCAt < 7:1020457/140‑1 (MQ=255)
gcagcaGTCGGTTAGCGCCGTAAAATGCTCCGGGGTTAACTTTTCCCGATGAATAAGCAAACCATTCAACGCGCGCTCAATCACTTCCGGTGCGGTCTTAGCGCACAGCTTACAGCCTTCCAGACAGAGTCGTGGGTCAt < 5:225383/140‑1 (MQ=255)
agcagTCGGTTAGCGCCGTAAAATGCTCCGGGGTTAACTTTTCCCGATGAATAAGCAAACCATTCAACGCGCGCTCAATCACTTCCGGTGCGGTCTTAGCGCACAGCTTACAGCCTTCCAGACAGAGTCGTGGGTCATAc < 2:943254/140‑1 (MQ=255)
agcagTCGGTTAGCGCCGTAAAATGCTCCGGGGTTAACTTTTCCCGATGAATAAGCAAACCATTCAACGCGCGCTCAATCACTTCCGGTGCGGGCTTAGCGCACAGCTTACAGCCTTCCAGACAGAGTCGTGGGTCATAc < 8:860095/140‑1 (MQ=255)
agcagTCGGTTAGCGCCGTAAAATGCTCCGGGGTGAACTTTTCCCGATGAATAAGCAAAGCTTTCAACGCGCGCTCAATCACTTCCGGTGCGGTCTTAGCGCACAGCTTACAGCCTTCCAGAGAGAGTCGTGGGTCATAc < 3:645168/140‑1 (MQ=255)
cagTCGGTTAGCGCCGTAAAATGCTCCGGGGTTAACTTTTCCCGATGAATAAGCAAACCATTCAACGCGCGCTCAATCACTTCCGGTGCGGTCTTAGCGCACAGCTTACAGCCTTCCAGACAGAGTCGTGGGTCATAcag < 1:435992/140‑1 (MQ=255)
cagTCGGTTAGCGCCGTAAAATGCTCCGGGGTTAACTTTTCCCGATGAATAAGCAAACCATTCAACGCGCGCTCAATCACTTCCGGTGCGGTCTTAGCGCACAGCTTACAGCCTTCCAGACAGAGTCGTGGGTAAAAcaa > 6:119371/1‑139 (MQ=255)
gTCGGTTAGCGCCGTAAAATGCTCCGGGGTTAACTTTTCCCGATGAATAAGCAAACCATTCAACGCGCGCTCAATCACTTCCGGTGCGGTCTTAGCGCACAGCTTACAGCCTTCCAGACAGAGTCGTGGGTGAAAcagca > 6:522268/1‑140 (MQ=255)
gTCGGTTAGCGCCGTAAAATGCTCCGGGGTTAACTTTTCCCGATGAATAAGCAAACCATTCAACGCGCGCTCAATCACTTCCGGTGCGGTCTTAGCGCACAGCTTACAGCCTTCCAGACAGAGTCGTGGGGGATAcagcc > 5:27552/1‑139 (MQ=255)
ggTTAGCGCCGTAAAATGCTCCGGGGTTAACTTTTCCCGATGAATAAGCAAACCATTCAACGCGCGCTCAATCACTTCCGGTGCGGTCTTAGCGCACAGCTTACAGCCTTCCAGACAGAGTCGTGGGTACTAcagcagct > 4:735359/1‑138 (MQ=255)
gcgcCGTAAAATGCTCCGGGGTTAACTTTTCCCGATGAATAAGCAAACCATTCAACGCGCGCTCAATCACTTCCGGTGCGGTCTTAGCGCACAGCTTCCAGCCTGCCAGACAGAGTCGTGGGTGAAAGACCAGATccggg > 1:71868/1‑137 (MQ=255)
aaTGCTCCGGGGTTAACTTTTCCCGATGAATAAGCAAACCATTCAACGCGCGCTCAATCACTTCCGGTGCGGTCTTAGCGCACAGCTTACAGCCTTCCAGACAGAGTCGTGGGTCATACAGCAGATCCTGCGTGCGGgcg < 6:29710/140‑1 (MQ=255)
cTCCGGGGTTAACTTTTCCCGATGAATAAGCAAACCATTCAACGCGCGCTCAATCACTTCCGGTGCGGTCTTAGCGCACAGCTTACAGCCTTCCAGACAGAGTCGTGGGTCAAAAAGCAGATACTGCGTGCGGGCGCggg > 6:143773/1‑139 (MQ=255)
tCCGGGGTTAACTTTTCCCGATGAATAAGCAAACCATTCAACGCGCGCTCAATCACTTCCGGTGCGGTCTTAGCGCACAGCTTACAGCCTTCCAGACAGAGTCGTGGGTCATACCGCAGATGCTGCCTGCGGGcgccgcg > 4:744077/1‑139 (MQ=255)
tCCGGGGTTAACTTTTCCCGATGAATAAGCAAACCATTCAACGCGCGCTCAATCACTTCCGGTGCGGTCTTAGCGCACAGCTTACAGCCTTCCAGACAGAGTCGTGGGTCATACAGCAGATCCTGCGTGCGGGCGCGGCt < 1:981910/140‑1 (MQ=255)
tCCGGGGTTAACTTTTCCCGATGAATAAGCAAACCATTCAACGCGCGCTCAATCACTTCCGGTGCGGTCTTAGCGCACAGCTTACAGCCTTCCAGACAGAGTCGTGGGTCATACAGCAGATCCTGCGTGCGGGCGCGGCt > 2:1081172/1‑140 (MQ=255)
cGGGGTTAACTTTTCCCGATGAATAAGCAAACCATTCAACGCGCGCTCAATCACTTCCGGTGCGGTCTTAGCGCACAGCTTACAGCCTTCCAGACAGAGTCGTGGGTAATAAAGCAGATCCTGCGTGCGGGCGCGGCttt > 6:91349/1‑140 (MQ=255)
cGGGGTTAACTTTTCCCGATGAATAAGCAAACCATTCAACGCGCGCTCAATCACTTCCGGTGCGGTCTTAGCGCACAGCTTACAGCCTTCCAGACAGAGTCGTGGGGCCTACAGCAGATCCTGCGTGCGGGCGCGGCgtt > 2:51186/1‑140 (MQ=255)
cGGGGTTAACTTTTCCCGATGAATAAGCAAACAATTCAACGCGCGCTCAATCACTTCAGGTGCGGTCTTAGCGCACAGCTTACAGCCTTCCAGACAGAGTCGTGGGAAATAAACCAGATACTGAGTTCGTGAGCGGCttt > 6:688236/1‑140 (MQ=255)
ggggTTAACTTTTCCCGATGAATAAGCAAACCATTCAACGCGCGCTCAATCACTTCCGGTGCGGTCTTAGCGCACAGCTTACAGCCTTCCAGACAGAGTCGTGGGTCATACAGCAGATCCTGCGTGCGGGCGCGGCTTTc < 7:362424/140‑1 (MQ=255)
tttAACTTTTCCCGATGAATAAGCAAAACATTCAACGCGCGCTCAATCACTTCCGGTGCGGTCTTAGCGCACAGCTTACAGCCTTCCAGACAGAGTCGTGGGTCATACAGCAGATCCTGCGTGCGGGCGCGGCTTTCCgg < 4:246264/139‑1 (MQ=255)
gTTAACTTTTCACGATGAATAAGCAAACCATTCAACGCGCGCTCAATCACTTCCGGTGCGGTCTTAGCGCACAGCTTACAGCCTTCCAGACAGAGTCGTGGGTCATACAGCAGATCCTGCGTGCGGGCGCGGCTTTCCgg < 8:327907/140‑1 (MQ=255)
cTTTTCCCGATGAATAAGCAAACCATTCAACGCGCGCTCAATCACTTCCGGTGCGGTCTTAGCGCACAGCTTACAGCCTTCCAGACAGAGTCGTGGGTCATACAGCAGATCCTGCGTGCGGGCGCGGCTTTCCGGGTTCt < 1:51186/140‑1 (MQ=255)
cccGAAGAATAAGCAAACCATTCAACGCGCGCTCAATCACTTCCGGTGCGGTCGTAGCGCACAGCTTACAGCCTTCCAGACAGAGTCGTGGGTCATACAGCAGATCCTGCGTGCGGGCGCGGCTTTCCGGGTTCTGacac < 7:648976/140‑1 (MQ=255)
taaTTAGCAAACAATTCAACGCGCTCTCATTCACTTCCGGTGAGGTCTTAGCGCACAGCTTACAGTCTTCCAGTCAGAGTCGTTGGTCATACATCATATCCTGCGTGCGGGCGCGGCTTTCCGGGTTCTGACAGCAGCgg < 4:613252/139‑1 (MQ=255)
taaTAAGCAAACCATTCAACGCGCGCTCAATCACTTCCGGTGCGGTCTTAGCGCACAGCTTACAGCCTTCCAGACAGAGTCGTGGGTCATACAGCAGATCCTGCGTGCGGGCGCGGCTTTCCGGGTTCTGACACCAGCgg < 2:1068715/139‑1 (MQ=255)
aTAAGCAAACCATTCAACGCGCGCTCAATCACTTCCGGTGCGGTCTTAGCGCACAGCTTACAGCCTTCCAGAGAGAGTCGTGGGTCATACAGCAGATCCTGCGTGCGGGCGCGGCTTTCCGGGTTCTGACACCAGCGGCa < 7:43754/140‑1 (MQ=255)
tAAGCAAACCATTCAACGCGCGCTCAATCACTTCCGGTGCGGTCTTAGCGCACAGCTTACAGCCTTCCAGACAGAGTCGTGGGTCATACAGCAGATACTGCGTGCGGGCGCGGCGTTCCGGGTTCTGACACCAGCGGCAg > 4:921926/1‑140 (MQ=255)
tAAGCAAACCATTCAACGCGCGCTCAATCACTTCCGGTGCGGTCTTAGCGCACAGCTTACAGCCTTCCAGACAGAGTCGTGGGGCATACAGCCGATCCTGCGTGCGGGCGCGGCTTTCCGGGGTCTGACCCCAGCGGCac > 3:945033/1‑139 (MQ=255)
ccATTCAACGCGCGCTCAATCACTTCCGGTGCGGTCTTAGCGCACAGCTTACAGCCTTCCAGACAGAGTCGTGGGTGATACAGCAGATCCTGCGTGCGGGCGCGGCGTTCCGGGTTCTGACACCAGCGGCCGCCCCGCGa > 8:264601/1‑140 (MQ=255)
caggcAACGCGCGCTCAATAACTTCCGGTGCGGGCTTACCGCACAGCTTACAGCCTTCCAGATCGAGTCGTGGGTCATACAGCAGATCCTGCGTGCGGGCGCGGCTTTCCTGGTTCTGACACCAGCGGCAGCCCAGCGaa < 6:415120/136‑1 (MQ=255)
cATTCTACGCGCGCTCAATCACTTCCGGTGCGGTCTTAGCGCACAGCTTACAGCCTTCCAGACAGAGTCGTGGGTCATACAGCAGATCCTGCGTGCGGGCGCGGCTTTCCGGGTTCTGACACCAGCGGCAGCCCAGCGaa < 6:17299/140‑1 (MQ=255)
cATTCAACGCGCGCTCAATCACTTCCGGTGCGGTCTTAGCGCACCGCGTACAGCCTTCCAGACAGCGTCGTGGGTCATACAGGCGCTCCTGGGGGCGGGCGCGGGGTGCCCGGTGGTGACCCCCGCGGGAGccgcgcgga > 7:475806/1‑133 (MQ=255)
cATTCAACGCGCGCTCAATCACTTCCGGTGCGGTCTTAGCGCACAGCTTACAGCCTTCCAGACAGAGTCGTGGGTCATACAGCAGATCCTGCGTGCGGGCGCGGCTTTCCGGGTTCTGACACCAGCGGCAGCCCAGCGaa < 7:569887/140‑1 (MQ=255)
cATTCAACGCGCGCTCAATCACTTCCGGTGCGGTCTTAGCGCACAGCTTACAGCCTTCCAGACAGAGTCGTGGGTCATACAGCAGATCCTGCGTGCGGGCGCGGCTTTCCGGGTTCTGACACCAGCGGCAGCCCAGCGaa < 4:917260/140‑1 (MQ=255)
cATTCAACGCGCGCTCAATCACTTCCGGTGCGGTCTTAGCGCACAGCTTACAGCCTTCCAGACAGAGTCGTGGGTCATACAGCAGATCCTGCGTGCGGGCGCGGCTTTCCGGGCTCTGACACCAGCGGCAGCCCAGCGaa < 5:1037761/140‑1 (MQ=255)
cATTCAACGCGCGCTCAATCACTTCCGGTGCGGTCTTAGCGCACAGCTTACAGCCTTCCAGACAGAGGCGTGGGTCATACAGCAGATCCTGCGTGCGGGCGCGGCTTTCCGGGTGCTGACACCAGCGGCAGCCCAGCGaa < 1:110076/140‑1 (MQ=255)
cATTCAACGCGCGATCAATCACTTCCGGTGCGGTCTTAGCGCACAGCTTACAGCCTTCCAGACAGAGTCGTGGGTCATACAGCAGATCCTGCGTGCGGGCGCGGCTTTCCGGGTTCTGACACCAGCGGCAGCCCAGCGaa < 5:574002/140‑1 (MQ=255)
ggctcTCAAGCACTTCCGGTGCGTTCTTAGCGCACAGCTTACAGCCTTCCAGACAGAGTCGTGGGTCATACAGCAGATCCTGCGTGCGTGCGCGGCTTTCCTGGTGCTTACACCAGCGGCAGCACAGGGAACAGCCTTTa < 4:841431/136‑1 (MQ=255)
cgcgcTCAATCCCTTCCGGTGCGGGCTTAGCGCACAGCTTACAGCCTTCCAGACAGAGTCGTGGGGCATACAGCAGATCCTGCGTGCGGGCGCGGCTTTCCGGGTTCTGACACCAGCGGCAGCCCAGCGAACAGCCTTTa < 7:526463/140‑1 (MQ=255)
cgcgcTCAATCACTTCCGGTGCGGTCTTAGCGCACAGCTTACCGCCTTCCAGACAGAGTCGTGGGTACTACAGCAGCAACGGCGTTCGGGCGCGGCGTTACGGGTTGTGCCACCAGCGGGAGCCCGACGCACAGCCTTTa > 4:418872/1‑140 (MQ=255)
cgcgcTCAATCACTTCCGGTGCGGTCTTAGCGCACAGCTTACAGCGTTCCAGACTGAGTCGTGGGTCATACAGCAGATCCTGCGTGCGGGCGCGGCTTTCCGGGTTCTGACACCAGCGGCAGCCCAGCGAACAGCCTTTa < 1:945810/140‑1 (MQ=255)
cgcgcTCAATCACTTCCGGTGCGGTCTTAGCGCACAGCTTACAGCCTTCCAGACAGAGTCGTGGGTCTTACAGCAGATCCTGCGTGCGGGCGCGGCTTTCCGGGTTCTGACACCAGCGGCAGCCCAGCGAACAGCCTTTa < 3:314808/140‑1 (MQ=255)
cgcgcTCAATCACTTCCGGTGCGGTCTTAGCGCACAGCTTACAGCCTTCCAGACAGAGTCGTGGGTCATACAGCAGATCCTGCGTGCGGGCGCGGCTTTCCGGGTTCTGACACCAGCGGCAGCCCAGCGAACAGCCTTTa < 1:1081172/140‑1 (MQ=255)
cgcgcTCAATCACTTCCGGTGCGGTCTTAGCGCACAGCTTACAGCCTTCCAGACAGAGTCGTGGGTCATACAGCAGATCCTGCGTGCGGGCGCGGCTTTCCGGGTTCTGACACCAGCGGCAGCCCAGCGAACAGCCTTTa < 7:736486/140‑1 (MQ=255)
cgcgcTCAATCACTTCCGGTGCGGTCTTAGCGCACAGCTTACAGCCTTCCAGACAGAGTCGTGGGTCATACAGCAGATCCTGCGTGCGGGCGCGGCTTTCCGGGTTCTGACACCAGCGGCAGCCCAGCGAACAGCCTTTa < 8:95926/140‑1 (MQ=255)
cgcgcTCAATCACTTCCGGTGCGGTCTTAGCGCACAGCTTACAGCCTTCCAGACAGAGTCGTGGGTCATACAGCAGATCCTGCGTGCGGGCGCGGCTTTCCGGGTTCTGACACCAGCGGCAGCCCAGCGAACAGCCTTTa < 1:945814/140‑1 (MQ=255)
cgcgcTCAATCACTTCCGGTGCGGTCTTAGCGCACAGCTTACAGCCTTCCAGACAGAGTCGTGGGGCATACAGCAGAGACTGCGGGCGGGCGCGGCGTTAAGGGTTGTGCCACCAGCGGCCACCCCGCGAACAGCCtgtt > 8:968920/1‑137 (MQ=255)
cgcgcTCAATAACTTCCGGTGCGGTCTTATCGCACAGCTTACAGCCTTCCAGACAGAGTCGTGGGTCATACAGCAGATCCTGCGTGCGGGCGCGGCTTTCCGGGTTCTGACACCAGCGGCAGCCCAGCGAACAGCCTTTa < 3:992627/140‑1 (MQ=255)
cgcgcTCAAGCACTTCCGGTGCGGTCTTAGCGCACAGCTTACAGCCTTCCAGACAGAGTCGTGGGTCATACAGCAGATCCTGCGTGCGGGCGCGGCTTTCCGGGTTCGGACCCCAGCGGCAGCCCAGCGAACAGCCTTTa < 8:251804/140‑1 (MQ=255)
gcgcTCAATCACTTCCGTTGAGGTATGAGCTCACAGCTTACAGCCTTCCAGACAGATTCGTTGTTCATAACGCAGCTCCTGCGTGCGGGCGCCGCGTTACGGTGTCTGAAACAACCGGCAGACCAGCCACAAGCCGTTaa > 6:795089/1‑140 (MQ=255)
gcgcTCAATCACTTCCGGTGCGGTCTTAGCGCACAGCTTACAGCCTTCCAGACAGAGTCGTGGGTCATACAGCAGATACTGCGTGCGGGCGCGGCGTTCCGGGTGATGACACCAGCGGCAGCCCCGCGAACAGCCTTTaa > 6:28147/1‑140 (MQ=255)
gcgcTCAATCACTTCCGGTGCGGTCTTAGCGCACAGCTTACAGCCTTCCAGACAGAGTCGTGGGTAATACAGCAGATCCATCGAGCGGGCGCCGCTATCCCGGATCATCCAACAGCCGCAGCCCATCGAACAGCCATTaa > 4:461587/1‑140 (MQ=255)
cgcTCAATCACTTCCGGTGCGGTCTTAGCGCACAGCTTACAGCCTTCCAGACAGAGTCGTGGGTCATACAGCAGATCCTGCGTGCGGGCGCGGCTTTCCGGGTTCTGACACCAGCGGCAGCCCAGCGAACAGCCTTTAAg < 3:58597/140‑1 (MQ=255)
aaTCAGTTCCGGTGCGGTCTTAGCGCACAGCTTACAGCCTTCCAGACAGAGTCGTGGGTCATACAGCAGATCCTGCGTGCGGGCGCGGCTTTCCGGGTTCTGACACCAGCGGCAGCCCTGCGAACAGCCTTTAAGAAATa < 4:1091833/140‑1 (MQ=255)
aCTTCCGGTGCGGTCTTAGCGCACAGCTTACAGCCTTCCAGACAGAGTCGTGGGTCATACAGCAGATCCTGCGTGCGGGCGCGGCTTTCCGGGTTCTGACACCAGCGGCAGCCCAGCGAACAGCCTTTAAGAAATACGAc < 3:297793/140‑1 (MQ=255)
aCTTCCGGTGCGGTCTTAGCGCACAGCTTACAGCCTTCCAGACAGAGTCGTGGGTCATACAGCAGATCCTGCGTGCGGGCGCGGCGTTCCGGGTTCTGACACCAGCGGCAGCCCAGCGAACAGCCTTTAAGAAATACGAc < 6:432990/140‑1 (MQ=255)
ccggtccggtCTTAGCGCACAGCTTACAGCCTTCCATACCGATTCGTGGTTCATACAGCAGATCCTGCGTGCGGGCGCTGCTTTCCGTGTTCTGACACCAGCTGCAGCCCAGCGAACAGCCTTTAAGAAATACGACCGTg < 2:875891/140‑1 (MQ=255)
ccGGTGCGGTCTTAGCGCACAGCTTACAGCCTTCCAGACAGAGTCGTGGGTCATACAGCAGATCCTGCGTGCGGGCGCGGCTTTCCGGGGTCTGACACCAGCGGCAGCCCAGCGAACAGCCTTTAAGAAATACGACCGTg < 3:959644/140‑1 (MQ=255)
ccGGTGCGGTCTTAGCGCACAGCTTACAGCCTTCCAGACAGAGTCGTGGGTCAAAAACCAGATACATCGTGCGGGCCCGGCATTACCGGTTCAGACACCACCGGCAGCCCCGCGCACAGCCATTAACAAAAACGCCCGTg > 2:79307/1‑140 (MQ=255)
ccGGTGCGGTCTTAGCGCACAGCTTACAGCCTTCCAGACAGAGTCGTGGGGCCGACAGCAGATACTGGGTGCGGGCGCGGCGGTGCGGGGTCTGCCCCCCCCCGCCCCCCCGCGACCCGCCTTTAAGAAATACGCCCggg > 8:347722/1‑138 (MQ=255)
gTCTTAGCGCACAGCTTACAGCCTTCCAGACAGAGTCGTGGGTCATACAGCAGATCCTGGGTGCGGGCGCGGCTTTCCGGGTTCTGACACCAGCGGCCGCCCAGCGAACCGCCTATAACAAATACGCCCGTGCGGA‑Taac > 3:798244/1‑138 (MQ=255)
tAGCGCACAGCTTACTGTCTTCCTGAGAGAGGCGTGGGTCATACAGCAGATCCTGCTTGCGGGCGGGGCTTTCCTGGTTCTGACACCAGCTGCAGCCCTGCTAACAGCCTTTAAGATATACGACCGTGCGGA‑TACCgggg < 1:910099/140‑1 (MQ=255)
tAGCGCACAGCTTACAGCCTTCCCGACAGAGTCGGGGGTCATACAGCAGATCCTGCGTGCGGGCGCGGCTTTCCGGGTTCGGACCCCAGCGGCAGCCCAGCGAACAGCCTTTAAGAAATACGACCGTGCGGA‑TACCgggg < 7:1021957/140‑1 (MQ=255)
tAGCGCACAGCTTACAGCCTTCCAGACTGAGTCGTGGGTCATACAGCAGATTCTGCGTGCGGGCGCGGCTTTCCGGGTTCTGACACCAGCGGCAGCCCAGCGAACAGCCTTTAAGAAATACGACCGTGCGGA‑TACCgggg < 8:678071/140‑1 (MQ=255)
tAGCGCACAGCTTACAGCCTTCCAGACAGTGTAGGGGGTCATACAGCAGATCCGGCGGGCGGGCGCGGCGTGCCGGGTTCTGACACCAGCGGCATCCCAGCGAACTGCATTTAAGAAATACGACCGTGCGGA‑TACCgggg < 4:824114/140‑1 (MQ=255)
tAGCGCACAGCTTACAGCCTTCCAGACAGAGTCGTGGGTCATACAGCAGATCCTGCGTGCGGGCGCGGCTTTCCGGGTTCTGACACCAGCGGCAGCCCAGCGAACAGCCTTTAATAAATACGACCGTGCGGA‑TACCgggg < 2:168726/140‑1 (MQ=255)
tAGCGCACAGCTTACAGCCTTCCAGACAGAGTCGTGGGTCATACAGCAGATCCTGCGTGCGGGCGCGGCTTTCAGGGTTCTGACACCAGCGGCAGCCCAGCGAACAGCCTTTAAGAAATACGACCGTGCGGA‑TACCgggg < 5:572457/140‑1 (MQ=255)
tAGCGCACAGCTAACAGCCTTCCAGACAGAGTCGTGGGTCATACAGCAGATCCTGCGTGCGGGCGCGGCTTTCCGGGTTCTGACACCAGCGGCAGCCCAGCGAACAGCCTTTAAGAAATACGACCGTGCGGA‑TACCgggg < 7:871674/140‑1 (MQ=255)
gcACAGCTTACACCCTTCCACACAGTTGCGGGGGTAAAACAGCAGATCCTGCGTGCGGGAGCGGCTTTCCGGGTGCTGACACCAGCGGCAGCACAGCGAACAGCCTTTAAGAAATACGACCGTGCGGA‑TACAGGGGCcat < 4:665740/140‑1 (MQ=255)
cacaGCTTACAGCCTTCCAGACAGAGTCGTGGGTCATACAGCAGATCCTGCGTGCGGGCGCGGCTTTCCGGGTTCTGACACCAGCGGCAGCCCAGCGAACAGCCTTTAAGAAATACGACCGTGCGGA‑TACCGGGGCcatc < 5:264481/140‑1 (MQ=255)
cacaGCTTACAGCCTTCCAGACAGAGTCGTGGGTCATACAGCAGATCCTGCGTGCGGGCGCGGCTTTCCGGGTTCTGACACCAGCGGCAGCCCAGCGAACAGCCTTTAAGAAATACGACCGTGCGGA‑TACCGGGGCcatc < 3:1056606/140‑1 (MQ=255)
caGCTTACAGCCTTCCAGACAGAGTCGTGGGTGATACAGCAGATCCTGCGTGCGGGCGCGGCGTTGCGGGGTCTGCCACCCGCGGCCGCCCCGCGGACAGCCTTTAAGAAATAAGCCCGGGCGGA‑ACCCGGGGcccgcat > 8:1019461/1‑135 (MQ=255)
caGCTTACAGCCTTCCAGACAGAGTCGTGGGTGATAAAGCAGATCCTGCGTGCGGGCGCGGCATTCCGGGTTCTGACACCCCCGGCACCCACGCCACCCCCCTGTAAGAAAAACGCCCCTGCGGG‑AACAGGGGccctaaa > 6:550188/1‑135 (MQ=255)
caGCTTACAGCCTTCCAGACAGAGTCGTGGGTCATACAGCAGATCCTGCGTGCGGGCGCGGCTTTCCGGGTTCTGACACCAGCGGCAGCCCAGCGAACAGCCTTTa > 2:842540/1‑106 (MQ=255)
caGCTTACAGCCTTCCAGACAGAGTCGTGGGTCATACAGCAGATCCTGCGTGCGGGCGCGGCTTTCCGGGTTCTGACACCAGCGGCAGCCCAGCGAACAGCCTTTa < 1:842540/106‑1 (MQ=255)
caGCTTACAGCCTTCCAGACAGAGTCGTGGGTCATACAGCACCTGCAGCGTGCGGGCGCGGGGTTACGGGGTGTGACCCCCCCCGCCGCCCAGCGAACAGCCATTAAGAAATACGACCGTGCCGA‑TTACGGGGCcctcaa > 4:15556/1‑139 (MQ=255)
caGCTTACAGCCTTCCAGACAGAGTCGTGGGTCATACAACCGAACCAACGTGAGGGGGCGGGGTNACGGCTTGAGACACCAGCGCAAGCCCACCGAAGCCCNTTTAAGAAATAAGCCCGTCCCGC‑TTCACGGGCcatcca > 8:61752/1‑138 (MQ=255)
caGCTTACAGCCTTCCAGACAGAGTCGTGGGGCATACAGCAGATACTGCGTGCGGGCGCGGCGTTCCGGGGTCTGACACCAGCGGCACCCCCGAGAACAGCCTTTAAGAAATACGACCGGGCGGA‑AACCGGGGGcctcat > 4:504728/1‑140 (MQ=255)
caGCTTACAGCCTTCCAGACAGAGTCGGGGGTCATACAGCAGATCCTGCGTGCGGGCGCGGCTTTCCGGGTTCTGACACCAGCGGCAGCCCAGCGACCAGCCTTTAAGAAATACGACCGTGCGGA‑TACCGGGGCcatcat < 6:667790/140‑1 (MQ=255)
ttttcAGCCTTCCAGACAGAGTCGTGTGTCATACAGCAGATCCTTCGTGCGGGCGCGGCTTTCCGGGTGCTGACAGCAGAGGCAGCCAAGAGAACATCATTTAAGAATTACTACCGTGAGGA‑TACCGGTTACATCATggg < 4:10025/136‑1 (MQ=255)
gttACAGCCTTCCAGACAGAGTCGTGGGTCATACAGCAGATCCTGGGTGCGGGCGCGGCTTTCCGGGTTCTGACACCAGCGGCAGCCCAGCGAACAGCCTTTAAGAAATACGACCGTGCGGA‑TACCGGGGCCATCATggg < 5:646324/139‑1 (MQ=255)
cgCCTTCCAGACAGAGTCGTGGGTCATACAGCAGATCCTGCGTGCGGGCGCGGCTTTCCGGGTTCTGACACCAGCGGCAGCCCAGCGAACAGCCTTTAAGAAATACGACCGTGCGGA‑TACCGGGGCCATCATGGGTCGAg < 3:1080052/139‑1 (MQ=255)
aGCCTTCCAGACAGAGTCGTGGGTCATACAGCAGATCCTGCGTGCGGGCGCGGCTTTCCGGGTTCTGACACCAGCGGCAGCCCAGCGAACAGCCTTTAAGAAATACGACCGTGCGGA‑TACCGGGGCCATCATGGGTCGAg < 6:879260/140‑1 (MQ=255)
aGCATTCCAGACAGAGTGGTGGTGCATACAGCAGATCCTGCGTGCGGGCGCGGCTTTCCGGGTTCTGACACCAGCGGCAGCCCAGCGAACAGCCTTTAAGAAATACGACCGTGCGGA‑TACCGGGGCCATCATGGGTCGAg < 2:255464/140‑1 (MQ=255)
tCCAGACAGAGTCGTGGGTGATACAGCAGATCCGGCGTGCGGGCGCGGCTTTCCGGGGTCAGACACCAGCCGCCGCCCCGCCCACAGACTTTAATAAAATCGACCCGTCGGC‑TAACAGGGCCCTGAAGGGGGGAGTAGCg > 2:161847/1‑140 (MQ=255)
tCCAGACAGAGTCGTGGGTGATACAGCAGAACCTGCGTGCGGGCGCGGCGTTCCGGGTTCTTCCACCAGCGGCAGCCCAGACAAACCCCAGTAATAACTACGACCGGGCGGAGTCCGGGGGCCACCTTGGG‑CGAGGAGCg > 2:86862/1‑140 (MQ=255)
tCCAGACAGAGTCGTGGGTCATACAGCAGATCCTGCGTGCGGGCGCGGCTTTCCGGGTTCTGACACCAGCGGCAGCCCAGCGAAc < 3:531213/85‑1 (MQ=255)
tCCAGACAGAGTCGTGGGTCATACAGCAGATCCAGCGTGCGGGCGCGGCGTTCCGGGGTCGGACACCAGCGGCAGCCCCGCGAACAGCCGTTAAGAAAAACGCCCGTGCGGA‑TACCGGGGCCATCATTGGTCGAGGAGCg > 8:658788/1‑140 (MQ=255)
tCCAGACAGAGTCGTGGGTCATAAAGCAGATCCGGCGTGGGGGCGCGGCGTTCCGGGTTCTGACCCCCGCGGCCGCCCCGCGCACAGCCGTTTATAAATACGACCCTGCGGT‑TACCCGGGCCCTCCAGGGTCgcggtgcg > 2:733384/1‑133 (MQ=255)
tCCAGACAGAGTCGTGGGTAATAAATCAGATCCAGCGTTCGGGCGAAGCTTTACCGGTTATTCAACCAGCGGCATCCCAGCAAACAACCTTTAAGAAAAAAAACAAGGCGGA‑TACCAGGGCCCAAATGGCTCGatgatcg > 6:818645/1‑134 (MQ=255)
tCCAGACAGAGTCGTGGGGGATAAAACAGAAACAGCGTACGGGCCCGCGTTTACGGGTTTATTCACCACGCGCACCCCATCCAAACGCCATTAAGAAAAACGGCCGGGCGGA‑TACCGGGGGCATCAAGGGTCGAggaagg > 8:106089/1‑135 (MQ=255)
tCCAGACAGAGTCGTGGGGCATACAGCCGCTCCTGCGTGCGGGCGCGGCGTTGCGGGTTGTGCCCCCCGCGGCCGCCCCGCGCGCAGCCATTAAGAAATACGACCGGGCGGC‑TACCGGGGCCCTCATGGGTCGGGTTGCg > 6:381350/1‑140 (MQ=255)
tCCAGACAGAGTCGTGGGGCATACAGCAGCTCCAGCGGGCGGGCGCGGCGTTACGGGTTCAGACACCCCCCGCAGCCCAGAGCAAAGCCTATAAGAAATAAGCCCGTGCCGG‑TACCGGGGGCCACAAGGGGAGAGTAGCg > 8:501512/1‑140 (MQ=255)
cagacagaGTCGTGGGTCTTACAGCACATCCTGCGGGCGGGCGCGGCTTTCCGGTTTCTGACACCAGCGGCAGCCCAGCGAACAGCCTTTAAGAAATAAGACCGTGCGGA‑TACCGGGGCCATCATGGGTCGAGTAGCGtt < 8:523299/140‑1 (MQ=255)
agTCGTGGGTCATACAGCCGATCCGGCGTGCGGGCGGGGCTTTCCGGGTTGTGACCCCCGCGGCAGCCCCGCGAACCGCCGTTAAGAAATACGCCCGGGCGGA‑TACCCGGGCCAACATGGGGCGAGGAGCGGTGAATAtt > 2:1004847/1‑140 (MQ=255)
agTCGTGGGGCATACAGCAGATCCTGCGTGCGGGCGCGGCGTTCCGGGTTGTGCCCCCACCCGCCGCCCCGCGCACAGCCGTTTAGAAATAACACCGTGCGGA‑TACCGGGGGCCTCATGGGGGGAGGAGCGTTGAATAtt > 2:982268/1‑140 (MQ=255)
cGTGGGTCATACAGCAGATCCTGCGTGCGGGCGCGGCTTTCCGGGTTCTGACACCAGCGGCAGCCCAGCGAACAGCCTTTAAGAAATACGACCGTGCGGA‑TACCGGGGCCATCATGGGTCGAGTAGCGTTGAATATTGaa < 2:266851/140‑1 (MQ=255)
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GGGCAGCAGTCGGTTAGCGCCGTAAAATGCTCCGGGGTTAACTTTTCCCGATGAATAAGCAAACCATTCAACGCGCGCTCAATCACTTCCGGTGCGGTCTTAGCGCACAGCTTACAGCCTTCCAGACAGAGTCGTGGGTCATACAGCAGATCCTGCGTGCGGGCGCGGCTTTCCGGGTTCTGACACCAGCGGCAGCCCAGCGAACAGCCTTTAAGAAATACGACCGTGCGGA‑TACCGGGGCCATCATGGGTCGAGTAGCGTTGAATATTGAA > NZ_CP022686/4368203‑4368474
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| Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
N/A
