Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A10 F35 I0 R1
|
195 |
10216.4 |
8585726 |
98.3% |
8439768 |
135.8 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
freq |
annotation |
gene |
description |
| RA |
NZ_CP022686 |
4,368,341 |
T→G |
13.4% |
D47A (GAC→GCC) |
ybiY ← |
glycyl‑radical enzyme activating protein |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NZ_CP022686 | 4,368,341 | 0 | T | G | 13.4%
| 214.2
/ 7.2
| 131 | D47A (GAC→GCC) | ybiY | glycyl‑radical enzyme activating protein |
| Reads supporting (aligned to +/- strand): ref base T (39/71); new base G (17/4); total (56/75) |
| Fisher's exact test for biased strand distribution p-value = 1.74e-04 |
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 |
Only 100 of 133 total aligned reads displayed.
GGGCAGCAGTCGGTTAGCGCCGTAAAATGCTCCGGGGTTAACTTTTCCCGATGAATAAGCAAACCATTCAACGCGCGCTCAATCACTTCCGGTGCGGTCTTAGCGCACAGCTTACAGCCTTCCAGACAGAGTCGTGGGTCATACAGCAGATCCTGCGTGCGGGCGCGGCTTTCCGGGTTCTGACACCAGCGGCAGCCCAGCGAACAGCCTTTAAGAAATACGACCGTGCGGATA‑CCGGGGCCATCATGGGTCGAGTAGCGTTGAATATTGAAAATCAT > NZ_CP022686/4368203‑4368480
|
gggCAGCAGTCGGTTAGCGCAGTAAATTGCTCCGGGGTTAAATTTTCCCGATGAATAAGCAAACCTTTCAACGCGCGCTCAATCACTTCCGGTGCGGTCTTAGCGCAAAGCTTACAGCCTTCCAGACAGAGTCGTGGGTc < 8:156378/140‑1 (MQ=255)
ggCAGCTGGCGGTTAGCGCCGTAAAATGCTCCGGGGGTAACTTTTCCCGATGAATAAGCAAACCATTCAACGCGCGCTCACTCACTTCCGGTGCGGTCTTAGCGCACAGCTTACAGCCTTCCAGACAGAGTCGTGGGTCa < 2:398485/140‑1 (MQ=255)
ggCAGCAGTCGGTTAGCGCCGTAAAATGCTCCGGGGTTAACTTTTCCCGATGAATAAGCAAACCATTCAACGCGCGCTCAATCACTTCCGGTGCGGTCTTAGCGCACAGCTTACAGCCTTCCAGACAGAGTCGTGGGtga > 7:429316/1‑138 (MQ=255)
ggCAGCAGTCGGTTAGCGCCGTAAAATGCTCCGGGGTTAACTTTTCCCGATGAATAAGCAAACCATTCAACGCGCGCTCAATCACTTCCGGTGCGGTCTTAGCGCACAGCTTACAGCCTTCCAGACAGAGTCGTGGGTCa > 1:209516/1‑140 (MQ=255)
ggCAGCAGTCGGTTAGCGCCGTAAAATGCTCCGGGGTTAACTTTTCCCGATGAATAAGCAAACCATTCAACGCGCGCTCAATCACTTCCGGTGCGGTCTTAGCGCACAGCTTACAGCCTTCCAGACAGAGTCGTGGGGCa > 2:380346/1‑140 (MQ=255)
gcaggaGTCGGTTAGCGCCGTAAATTGCTCCGGGGTTAACTTTTCCCGATGAATAAGCAAACCTTTCAACGCGCGCTCAATCACTTCCGGGGCGGTCTTAGCGCACAGCTTACAGCCTTCAAGACAGAGTCGTTGGTCAt < 2:628217/140‑1 (MQ=255)
gcagcaGTCGGTTAGCGCCTTAAAATGCTCCGGGGTTAACTTTTCCCGATGAATAAGCAAACCATTCAACGCGCTCTCAATCACTTCCGGTGCGGTCTTAGCGCACAGCTTACAGCCTTCCAGACAGAGTCGTGGGTCAt < 3:274241/140‑1 (MQ=255)
gcagcaGTCGGTTAGCGCCGTAAAATGCTCCGGGGTTAACTTTTCCCGATGAATAAGCAAACCATTCAACGCGCGCTCAATCACTTCCGGTGCGGTCTTAGCGCACAGCTTACAGCCTTCCAGACAGAGTCGTGGGTc < 5:66797/138‑1 (MQ=255)
gcagcaGTCGGTTAGCGCCGTAAAATGCTCCGGGGTTAACTTTTCCCGATGAATAAGCAAACCATGCAACGCGCGCTCAATCACTTCCGGTGCGGTCTTAGCGCACAGCTTACAGCCTTCCAGACAGAGTCGTGGGTCAt < 1:37218/140‑1 (MQ=255)
gcagaaGTCGGTTAGCGCCGTAAAATGCTCCGGGGTTAACTTTTCCCGATGAATAAGCAAACCATTCAACGCGCGCTCAATCACTTCCGGTGCGGTCTTAGCGCACAGCTTACAGCCTTCCAGACAGAGTCGTGGGTCAt < 2:222386/140‑1 (MQ=255)
cagcagTCGGTTAGCGCCGTAAAATGCTCCGGGGTTAACTTTTCCCGATGAATAAGCAAACCATTCAACGCGCGCTCAATCACTTCCGGTGCGGTCTTAGCGCACAGCTTACAGCCTTCCAGACAGAGTCGTGGGTCATa > 1:286505/1‑140 (MQ=255)
cagcagTCGGTTAGCGCCGTAAAATGCTCCGGGGTTAACTTTTCCCGATGAATAAGCAAACCATTCAACGCGCGCTCAATCACTTCCGGTGCGGTCTTAGCGCACAGCTTACAGCCTTCCAGACAGAGTCGTGGGGCa > 6:866548/1‑138 (MQ=255)
agcagTCGGTTAGCGCCGTAAAATGCTCCGGGGTTAACTTTTCCCGATGAATAAGAAAACCATTCAACGCGCGCTCAATCACTTCCGGTGCGGTCTTAGCGCACAGCTTACAGCCTTCCAGACAGAGTCGTGGGTCAt < 5:713140/138‑1 (MQ=255)
cagTCGGTTAGCGCCGTAAAATGCTCCGGGGTTAACTTTTCCCGATGAATAAGCAAACCATTCAACGCGCGCTCAATCACTTCCGGTGCGGTCTTAGCGCACAGCGTACAGCCTTCCAGACAGAGTCGTGGGGCATAccg > 2:520863/1‑138 (MQ=255)
cGGTTAGCGCCGTAAAATGCTCCGGGGTTAACTTTTCCCGATGAATAAGCAAACCATTCAACGCGCGCTCAATCACTTCCGGTGCGGTCTTAGCGCACAGCTTACAGCCTTCCAGACAGAGTCGTGGGTCATACAGCAGa < 4:398979/140‑1 (MQ=255)
gTTAGCGCCGTAAAATCCGCCGGGGTTAACTTTTCCCGATTAATAAGCAAACCATTCAACGCGCGCTCAATCACTTCCGGTGCGGTCTTAGCGCACAGCTTACAGCCTTCCAGACAGAGTCGTGGGTCATACAGCAGATc < 8:420181/140‑1 (MQ=255)
gcgcCGTAAAATGCTCCGGGGTTAACTTTTCCCGATGAATAAGCAAACCATTCAACGCGCGCTCAAACACTTCCGGTGCGGTCTTAGCGCACAGCTTACAGCCTTCCAGACAGAGTCGTGGGTGATACAGGAGATCCtgg > 2:438812/1‑139 (MQ=255)
cGTAAAATGCTCCGGGGTTAACTTTTCCCGATGAATAAGCAAACCATTCAACGCGCGCTCAATCACATCCGGTGCGGTCTTAGCGCACAGCTTACAGCCTTCCAGACAGAGTCGTGGGTCCAACACCACATCCagcgtgg > 1:1066948/1‑139 (MQ=255)
tAAAATGCTCCGGGGTTAACTTTTCCCGATGAATAAGCAAACCATTCAACGCGCGCTCAATCACTTCCGGTGCGGTCTTAGCGCACAGCTTACAGCCTTCCAGACAGAGTCGTGGGTCATACAGCAGATCCTGCGTGCgg > 2:379701/1‑140 (MQ=255)
aaaTGCTCCGGGGTTAACTTTTCCCGATGAATAAGCAAACCATTCAACGCGCGCTCAATCACTTCCGGTGCGGTCTTAGCGCACAGCTTACAGCCTTCCAGACAGAGTCGTGGGGCATAAAGCAGATCCTTCGTGCgg > 5:469408/1‑138 (MQ=255)
aaTGCTCCGGGGTTAACTTTTCCCGATGAATAAGCAAACCATTCACCGCGCGCTCAATCACTTCCGGTGCGGTCTTAGCGCACAGCTTACAGCCTTCCAGACCGAGTCGTGGGTCATACAGCAGATCCTGCGTGCGGgcg < 8:588144/140‑1 (MQ=255)
tGCTCCGGGGTTAACTTTTCCCGATGAATAAGCAAACCATTCAACGCGCGCTCAATCACTTCCGGTGCGGTCTTAGCGCACAGCTTACAGCCTTCCAGACAGAGTCGTGGGTCATACAGCAGATCCTGCGTGCGGGcgcg > 1:744028/1‑140 (MQ=255)
cTCCGGGGTTAACTTTTCCCGATGAATAAGCAAACCATTCAACGCGCGCTCAATCACTTCCGGTGCGGTCTTAGCGCACAGCTTACAGCCTTCCAGACAGAGTCGTGGGTCATACAGCAGATCCTGCGTGCggg > 5:1033454/1‑134 (MQ=255)
cTCCGGGGTTAACTTTTCCCGATGAATAAGCAAACCATTCAACGCGCGCTCAATCACTTCCGGTGCGGTCTTAGCGCACAGCTTACAGCCTTCCAGACAGAGTCGTGGGTCATACAGCAGATCCTGCGTGCggg < 6:1033454/134‑1 (MQ=255)
tCCGGGGTTAACTTTTCCCGATGAATAAGCAAACCTTTCAACGCGAGCTCAATCACTTCCGGTGCGGTCTTAGCGCACTGCTTACAGCCTTCCAGACAGAGTCGTGGGTAAAAACGCACATCCTGCGTGCGGGCGGGGCt > 1:445233/1‑140 (MQ=255)
tCCGGGGTTAACTTTTCCCGATGAATAAGCAAACCATTCAACGCGCGCTCAATCACTTCCGGTGCGGTCTTAGCGCACAGCTTACAGCCTTCCAGACAGAGTCGTGGGTCATAAAGCCCATACAGCGGGCGGTCGCGGcg > 3:275686/1‑139 (MQ=255)
tCCGGGGTTAACTTTTCCCGATGAATAAGCAAACCATTCAACGCGCGCTCAATCACTTCCGGTGCGGTCTTAGCGCACAGCTTACAGCCTTCCAGACAGAGTCGTGGGGGATAAAGCAGATCCTGGGTGCGGGCGCGGcg > 1:714887/1‑139 (MQ=255)
ggggTAACTTATCCCGATGAATAAGCAAACCATTCAACGCGCGCTCCATCACTACCGGTGCGGTCTTAGCGCACAGCTTACAGCCTTCCAGACAGAGTCGTGGGTCATACAGCAGATCCTGCGTGCGGGCGCGGCTTTcc < 7:613396/140‑1 (MQ=255)
gggTTAACTTTTCCCGATGAATAAGCAAACCATTCAACGCGCGCTCAATCACTTCCGGTGCGGTCTTAGCTCAAAGCTTACAGCCTTCCAGACAGAGTCGTGGGGGCTACCGCAGAACAAGCGGGCGGGCGCGGCttt > 5:47387/1‑138 (MQ=255)
gggTTAACTTTTCCCGATGAATAAGCAAACCATTCAACGCGCGCTCAATCACTTCCGATGCGGTCTTAGCGCACAGCTTACAGCCTTCCAGACAGAGTCGTGGGTCATACAGCAGAAACTGCGGTCGGGCGCGGCtgt > 5:503609/1‑136 (MQ=255)
gTTAACTTTTCCCGATGAATAAGCAAACCATTCAACGCGCGCTCACTCACTTCCGGTGCTGTCTTATCGCACAGCTTACAGCCTTCCCGACAGAGTCGTGGGTAATACAGAAGATACTTCGTTAGGGCGCGGCGTTca > 6:703101/1‑137 (MQ=255)
gTTAACTTTTCCCGATGAATAAGCAAACCATTCAACGCGCGCTCAATCACTTCCGGTGCGGTCTTAGCGCACAGCTTACATCCTTCCAGACAGAGTCGTGGGGCAAACAGCCACTACTGCGTGCCGGCGCGGCGTTca > 6:1023459/1‑137 (MQ=255)
ttAACTTTTCCCGATGAATAAGCAAACCATTCAACGCGCGCTCAATCACTTCCGGTGCGGTCTTAGCGCACAGCTTACAGCCTTCCAGACAGAGTCGTGGGTCCTACAGCAGCTCCTGCGGGCGGGCGCCGCTTTTCggg > 7:351281/1‑140 (MQ=255)
tCCCGATGAATAAGCAAACCATTCAACGCGCGCTCAATCACTTCCGGTGCGGTCTTAGCGCACAGCTTACAGCCTTCCAGACAGAGTCGTGGGTCATACAGCAGATCCTGCGTGCGGGCGCGGCGTTCCGGGGTCTGaca > 8:430112/1‑140 (MQ=255)
gATGAATAAGCAAACCATTCAACGCGCGCTCAATCACTTCCGGTGCGGTCTTAGCGCACAGCTTACAGCCTTCCAGACAGAGTCGTGGGTCATACAGCAGATCCTGCGTGCGGGCGCGGCTTTCCGGGTTCTGACACCAg < 4:366271/140‑1 (MQ=255)
gattAAGCAAACCATTCAACGCGCGCTCAATCACTTCCGGTGCGGGCTTAGCGCACAGATTACAGCCTTCAAGACAGAGTCGTGGGTCATACAGCAGATCCTGCGTGCGGGCGCGGATTTCCGGGTTCTGACACCAGCgg < 8:635978/137‑1 (MQ=255)
aaCCATTCAACGCGCGCTCAATCACTTCCGGTGCGGTCTTAGCGCACAGCTTACAGCCTTCCAGACAGAGTCGTGGGTGATACAGCAGCTCCGGCGTGGGGGCGCGGCGTTCCGGGTTAGGACCCCAGCGGCCGCCCCGc > 4:376922/1‑140 (MQ=255)
ccATTCAACGCGCGCTCAATCACTTCCGGTGCGGTCTTAGCGCACAGCTTACAGCCTTCCAGACAGAGTCGTGGGTCATTCCGCGAATCCAGCGTGGGGGCGCGGCGTTGCCGGTTGTGACCCCCGGGGGAGCCCcgcgg > 7:789881/1‑139 (MQ=255)
cATTCACCGCGCGCTCAATCACTTCCGGTGCGGTCTTCGCGCACAGCTTACAGCCTTCCAGACAGAGTCGTGGGTCATACAGCAGATCCTGCGTGCGGGCGCGGCTTTCCGGGTTCTGACACCAGCGGCAGCCCAGCGaa < 2:1083268/140‑1 (MQ=255)
cATTCAACGCGCGCTCAATCACTTCCGGTGCGGTCTTAGCGCACAGCTTACAGCCTTCCAGACAGAGTCGTGGGTCATACAGCAGATCCTGCGTGCGGGCGCGGCTTTCCGGGTTCTGACACCAGCGGCAGCCCAGCGaa < 2:286505/140‑1 (MQ=255)
ttCAACGCGCGCTCAATCACTTCCGGTGCGGTCTTAGCGCACAGCTTACAGCCTTCAAGACAGAGTCGTGGGTGATACAGCATATCCTGCGTGCGGGCGCTGCTTTGCGGGTTCTGACACCAGCGGCAGCCCAGCGAAcc > 8:423984/1‑139 (MQ=255)
cgcgcTCAATCACTTCCGGTGCGGTCTTAGCGCACAGCTTACAGCCTTCCAGACAGAGTCGTGGGTCATACAGCAGATCCTGCGTGCGTGCGCGGCTTTCCGGGTTCTGACACCAGCGGCAGCCCAGCGAACAGCCTTTa < 2:573941/140‑1 (MQ=255)
cgcgcTCAATCACTTCCGGTGCGGTCTTAGCGCACAGCTTACAGCCTTCCAGACAGAGTCGTGGGTCATACAGCAGATCCTGCGTGCGGGCGCGGCTTTCCGGGTTCTGACACCAGCGGCAGCCCAGCGAACAGCCtt < 5:155588/138‑1 (MQ=255)
cgcgcTCAATCACTTCCGGTGCGGTCTTAGCGCACAGCTTACAGCCTTCCAGACAGAGTCGTGGGTCATACAGCAGATCCTGCGTGCGGGCGCGGCTTTCCGGGTTCTGACACCAGCGGCAGCCCAGCGAACAGCCtt < 6:796337/138‑1 (MQ=255)
cgcgcTCAATCACTTCCGGTGCGGTCTTAGCGCACAGCTTACAGCCTTCCAGACAGAGGCGTGGGTCATACAGCAGATCCTGCGTGCGGGCGCGGCTTTCCGGGTTCTGACACCAGCGGCAGCCCAGCGAACAGCCtt < 5:971545/138‑1 (MQ=255)
cgcgcTCAATCACTTCCGGGGCGGTCTTAGCGCACAGCTTACAGCCTTCCAGACAGAGTCGTGGGTCATACAGCAGATCCTGCGTGCGGGCGCGGCTTTCCGGGTTCTGACACCAGCGGCAGCCCAGCGAACAGCCtt < 5:198915/138‑1 (MQ=255)
aaTCACTTCCGGTGCGGTCTTAGCGCACAGCTTACAGCCTTCCAGACAGAGTCGTGGGTCATACAGCAGATCCTGCGTGCGGGCGCGGCTTTCCGGGTTCTGACACCAGCGGCAGCCCAGCGAACAGCCTTTAAGAAATa < 3:477720/140‑1 (MQ=255)
aaTCAATTCCGGTGCGGTCTTCGCGCACAGCTTACAGCCTTCCAGACAGAGGCGTGGGTCATACAGCAGATCCTGCGTGCGGGCGCGGCGTTCCGGGTTCTGACACCAGCGGCAGCCCAGCGAACAGCCTTTAAGaaa < 6:242295/138‑1 (MQ=255)
aTCACTTCCGGTGCGGTCTTAGCGCACAGCTTACAGCCTTCCAGACAGAGTCGTGGGTCATACAGCAGATCCTGCGTGCGGGCGCGGCTTTACGGGTTGTGACACCAGCGGCAGCCCAGCGAACAGCCGTTaataaataa > 4:864111/1‑139 (MQ=255)
tCACTTCCGGTGCGGTCTTAGCGCACAGCTTACAGCCTTCCAGACAGAGTCGTGGGTCATACAGCAGATCCTGCGTGCGGGCGCGGCTTTCCGGGTTCTGACACCAGCGGCAGCCCAGCGAACAGCCTTTAAGAAATACg < 4:44445/140‑1 (MQ=255)
aCTTCCGGTGCGTTATTAGCGCACAGCTTACAGCCTTCCAGACAGAGTCGTGGGTCATACAGCAGATCCTGCGTGCGGGCGCGGCTTTCCGGGTTCTGACACCAGCGGCAGCCCAGCGAACAGCCTTTAAGAAATACGAc < 2:320446/140‑1 (MQ=255)
cTTCCGGTGCGGTCTTAGCGCACAGCTTACAGCCTTCCAGACAGAGTCGTGGGTCATACAGCAGATCCTGCGTGCGGGCGCGGCTTTCCGGGTTCTGACACCAGCGGCAGCCCAGCGAACAGCCTTTAAGAAATACGAcc < 8:81715/140‑1 (MQ=255)
ccGGTGCGGTCTTATCGCACAGCTTACAGCCTTCCAGACAGAGTCTGGGGTCATACAGCAGATCCTGCGTGCGGGCGCGGCTTTCCGGGTGCTGACACCAGCGGCAGCCCAGCGAACAGCCTTTAAGAAATACGACCg < 6:963351/138‑1 (MQ=255)
ggTGCGGTCTTAGCGCACAGCTTACAGCCTTCCAGACAGAGTCGTGGGTCATACAGCAGATCCTGCGTGCGGGCGCGGCTTTCCGGGTTCTGACACCAGCGGCAGCCCAGCGAACAGCCTTTAAGAAATACGACCGTGCg < 4:408526/140‑1 (MQ=255)
tGCGGTCTTAGCGCACAGCTTACCGCCTTCCAGACAGAGTCGTGGGTCCTACCGCAGCTCCTGCGTGCGGGCGCGGCTGTCCGGGGTAGGACCCCAGCGGCAGCCCCGCGAACAGACTGTAAGCAAAACGGACGGGCggg > 8:885300/1‑139 (MQ=255)
gTCTTAGCGCACAGCTTACAGCCTTCCAGACAGAGTCGTGGGTCATAAATCAGATACTGGGTGCGGGCGCGGCGTTCCGGGTTGTGACACCAGCCGCACCCCAGCGAACACCCCTTTATAAATAAGACCGTGCGGATA‑cc > 1:295181/1‑140 (MQ=255)
gTCTTAGCGCACAGCTTACAGCCTTCCAGACAGAGTCGTGGGTCATAAAGCAGCTCCAGCGTGCGGGCGCGGCGTTGCGGGTTCTGTCCCCAGCGGGCGCCCAGCGCACAGCCGTTTAGGAATACCACCGGGCGGATa > 6:998578/1‑138 (MQ=255)
tCTTAGCGCACATCTTACAGCCTTCCAGACAGTGTCGTGGGTCATACTGCAGATCCTGCGTGCGGGGGCGGCTTTCCGGGTGCTGACACCAGCGGCTGCCCAGCGAACAGCCTTTAAGAAATACGACCGTGCGGATA‑CCg < 7:762617/140‑1 (MQ=255)
tAGCTCAAAGCTTACAGCAATCTCTACAGAGGCGTGGGTCATACAGCAGATCCTGCGGTCGGGCTCGGCTTTCCGGGTTCTGACACCAGCTGCAGCCCAGCGAACAGCCTTTAAGAAATACGACCGTGCGGATA‑CCgg < 5:771267/138‑1 (MQ=255)
tAGCGCACAGCTTACAGCCTTCCAGACAGAGTCGTGGGTCATACAGCAGATCCTGCGTGCGGGCGCGGCTTTCCGGGTTCTGACACCAGCGGCAGCCCAGCGAACAGCCTTTAAGAAATACGACCGTGCGGATA‑CCgggg < 4:1038212/140‑1 (MQ=255)
cacaGCTTACAGCCTTCCAGACAGAGTCGTGGGTCATACAGCAGATCCTGCGTGCGGGCGCGGCTTTCCGGGTTCTGACACCAGCGGCAGCCCAGCGAACAGCCTTTAAGAAATACGACCGTGCGGATA‑CCGGGGCcatc < 2:744028/140‑1 (MQ=255)
cacaGCTTACAGCCTTCCAGACAGAGTCGTGGGGCATACAGCAGATCCTGCGTGCGGGCGCGGCTTTCCGGGTTCTGACACAAGCGGCAGCCCAGCGAACAGCCTTTAAGAAATACGACCGTGCGGATA‑CCGGGGCcatc < 2:111717/140‑1 (MQ=255)
aacaGCTTACAGCCTTCCAGACAGAGGCGTGGGTCATACAGCAGATCCTGCGTGCGGGCGCGGCTTTCCGGGGTCTGACACCAGCGGCAGCCCAGCGAACAGACTTTAAGAAATACGACCGTGCGGATA‑CCGGGGCcatc < 8:78940/139‑1 (MQ=255)
caGCTTACAGCCTTCCAGACAGAGTCGTGGGTGCTACCGCAGCTCCAGCGTGCGGGCGCGGCTTTCCGGGGTGGGCCACCAGCGGCAGCCCCGCGCGCAGCCGTTAATACATACGACCGTGCGGATA‑CCGGGGCcatcag > 8:665752/1‑139 (MQ=255)
caGCTTACAGCCTTCCAGACAGAGTCGTGGGTCATACAGCAGATCCTGCGTGCGGGCGCGGCTTTCCGGGTTCTGACACCAGCGGCAGCCCAGCGAACAGCCTTTAAGAAATACGACCGTGCGGATA‑CCGGGGCcatcat < 4:364203/140‑1 (MQ=255)
caGCTTACAGCCTTCCAGACAGAGTCGTGGGTCATACAGCAGATCCTGCGTGCGGGCGCGGCTTTCCGGGTTCTGACACCAGCGGCAGCCCAGCGAACAGCCTTTAAGAAATACGACCGTGCGGATA‑CCGGGGCcatcat < 4:704213/140‑1 (MQ=255)
caGCTTACAGCCTTCCAGACAGAGTCGTGGGTCATAAAGCAGATCCTGCGTGGTGGCGCGGCTTTCCGGGTTCTGACACCAGCGGCAGCCCAGCGAACAGCCTTTAAGAAATACGACCGTGCGGATA‑CCGGGGCcatcat < 8:109207/140‑1 (MQ=255)
caGCTTACAGCCTTCCAGACAGAGTCGTGGGGGATACCGCCGATCCGGCCTGCGGGCGCGGCGGTGCCGGTTGTGAGACCCGCGGGCGCCCAGCGAACCGCCGGTTAAAAAAACGACCGTGCGGAGACCCGGGGCcacat > 4:260004/1‑137 (MQ=255)
cTTACAGCCTTCCAGACAGAGTCGTGGGTCATACAGCAGATCCTGCGTGCGGGCGCGGCTTTCCGGGTTCTGACACCAGCGGCAGCCCAGCGAACAGCCTTTAAGAAATACGACCGTGCGGATA‑CCGGGGCCATCATggg < 8:863289/140‑1 (MQ=255)
ttACAGCCTTCCAGACAGAGTCGTGGGGGATACAGCAGATCCAGCGTGCGGGGGCCGCTTTACGGGTGAGGACCCCCGAGGCCGCCCCGGGAACCCCCGTTGAGAAATACGCCAGGGGGGTGA‑GCGGGGCCCTCTTgg > 6:213673/1‑138 (MQ=255)
tACAGCCTTCCAGACAGAGTCGTGGGGCATACAGCAGATCCTGCGTGCGGGCGCGGCTTTCCGGGTTCTGACACCAGCGGCAGCCCAGCGAACAGCCTTTAAGAAATACGACCGTGCGGATA‑CCGGGGCCATCATGGGTc < 4:741630/140‑1 (MQ=255)
aGCCTTCCAGACCGAGGCGTGGGTCATACAGCAGATCCTGCGTGCGGGCGCGGCTTTCCGGGTTCTGACACCAGCGGCAGCCCAGCGAACAGCCTTTAAGAAATACGACCGTGCGGATA‑CCGGGGCCATCATGGGTCGAg < 8:120020/140‑1 (MQ=255)
aGCCTTCCAGACAGAGTCGTGGGTCATACAGCAGATCCTGCGTGCGGGCGCGGCTTTCCGGGTTCTGACACCAGCGGCAGCCCAGCGAACAGCCTTTAAGAAATACGACCGTGCGGATA‑CCGGGGCCATCATGGGTCGAg < 2:528728/140‑1 (MQ=255)
aGCCTTCCAGACAGAGGCGTGGGTCATACAGCTGATCCTGCGTGCGGGCGCGGCTTACCGGGTTCTGACACCAGGGGCAGCCCAGCGAACAGCCTTTAAGAAATACGACCGTGCGGATA‑CCGGGGCCATCATGGGTCGAg < 4:159693/140‑1 (MQ=255)
ccTTCCAGACAGAGTCGTGGGTCATACAGCAGATCCTGCGTGCGGGCGCGGCTTTCCGGGTTCTGACACCAGCGGCAGCCCAGCGAACAGCCTTTAAGAAATACGACCGTGCGGATA‑CCGGGGCCATCATGGGTCGAGTa < 3:546398/140‑1 (MQ=255)
tCCAGACAGAGTCGTGGGTGATACAGCAGATCCTGCGTGCGGGCGCGGCGTTCCGGGTTCTGACACCAGCGGCAGCCCCGCGCACAGCCGTTAAGAAATACGACCGTGCGGATA‑CCGGGGCCCTCATGGGGCGAGTGGCg > 2:60852/1‑140 (MQ=255)
tCCAGACAGAGTCGTGGGTGATACAGCAGATACTGCGGGCGGGCGCGGCTTTCCGGGTTGTGGCACCAGCGGCAGCCCCGCGAACAGCCTATAATAAATACGACCGTGCGGCTT‑CCGGGGCCCTGATGGGTCggtctatt > 4:561064/1‑133 (MQ=255)
tCCAGACAGAGTCGTGGGTGATAAAGCAGATCCTGCGTGCGGGCGCGGCGTTCCGGGGTATGACCCCCGCGGCAGCCCAGCGAACAGCCTTTAAGAAATACGACCGGGCGGGTA‑CCGGGGCCCTCATGGGGAGAGTAGCg > 8:15151/1‑140 (MQ=255)
tCCAGACAGAGTCGTGGGTCATACAGCAGATCCTGCGTGCGGGCGCGGCTTTCCGGGGTCTGACCCCAGCGGCAGCCCAGCGAACAGCCTTTAAGAAATACGACCGGGCGGGTA‑CCGGGGGCATCATGGGGCGAGTAGCg > 2:436497/1‑140 (MQ=255)
tCCAGACAGAGTCGTGGGTCATACAGCAGATCCTGCGTGCGGGCGCGGCTTTCAGGGTTCTGACACCAGCGGCAGCCCAGCGAACAGCCTTTAAGAAATACGACCGTGCGGATA‑CCGGGGCCATCATGGGTCGAGTAGCg < 8:774049/140‑1 (MQ=255)
tCCAGACAGAGTCGTGGGTCATACAGCAGATCCTGCGTGCGGGCGCGGCTTTACGGGTTGTGACACCAGCGGCAGCCCAGCGAACAGCCGTTAAGAAATACGCCCGGGCGGCTA‑CCGGGGCCCTCATGGGTCGCGTAGCg > 8:786891/1‑140 (MQ=255)
tCCAGACAGAGTCGTGGGTCATACAGCAGATACTGCGTGCGGGCGCGGGGTTCCGGGGTCTGACACCCGCGGCCGCCCCGCGAGCAGCCGTTAAGAAATACGACCGTGCGGATA‑CCGGGGCCATCATGGGTCGAGTAGCg > 2:494641/1‑140 (MQ=255)
tCCAGACAGAGTCGTGGGTCATACACCAGCTCCTGCGTGCGGGCGCCGCGTTCCGGGTTCTGCCCCCAGCGGCAGCCCCGCGCACAGCCGTTAAGAAAAACGACCGTGCGGATA‑CCGGGGGCATCATGGGTGGCGTTGCg > 8:620192/1‑140 (MQ=255)
tCCAGACAGAGTCGTGGGTCATAACGCACATCCAGCGGGCGGGCGCGGGATTCCGGGTTATGAAACCCGCGGCCCCCCAGCGAGCACCAGTTAAAAAATAAGACCGACAGGAGA‑CCGCGGCCATCAAGGGTCGAGTatgg > 8:68426/1‑137 (MQ=255)
tCCAGACAGAGTCGTGGGTCATAAAGCAGATCCTGCGTGCGGGCGCGGCTTTACGGGTTATGACACCCGCCGCAGCCCACCGGACAGCCATTTAGAAATACGACCGTGCGGATA‑CCGGGGCCATCATGGGTCGAGtgtcg > 4:850872/1‑136 (MQ=255)
tCCAGACAGAGTCGTGGGTCAAACAGCAGATCCTGCGTGCGGGCGCGGCGTTCCGGGTTCTGACACCCCCGGCAGCCCAGCGAACAGCCTATAAGAAATACGCACGGGCGGGAA‑ACCGGGCCAACAAGGGTCGACTAGCg > 2:1102400/1‑140 (MQ=255)
tCCAGACAGAGTCGTGGGGCATACAGCAGATCCTGCGTGCGGGCGCGGCTTTCCGGGTTCTGACACCAGCGGCAGCCCAGCGAACCGCCATTAAGTAATACGACCGTGCGGCTA‑CCGGGGCCATCATTGGGGGAGTAggg > 8:663368/1‑138 (MQ=255)
tCCAGACAGAGTCGTGGGGCATAAAGCAGATGCTGCGTGCGGGCGCGGCTTTACGGGGTCTGACACCAGCGGCAGCCCCGCGCACAGCCTTTTAGAAATACGACCGGGCGGATA‑CCGGGGCCATCATTGGTCGGGTAGCg > 4:723549/1‑140 (MQ=255)
cagacagaGTCGTGGGTCATAAAGCAGATCCTGCGTGCGGGCGCGGCTTTACGGGTTATGACAACAGCGGCAGCCCAGCGCACAGCCTTTATGAAATACGACCGGGCGGATA‑CCGGGGGCATCATTGGGGGAGTAGCg > 6:586014/1‑138 (MQ=255)
ccagaGTCGTGGGTCATACAGCAGATCCTGCGTGCGGGCGCGGCTTTCCGGGTTCTGACACCAGCGGCAGCCCAGCGAACAGCCTTTAATAAATACGACCGTGCGGATA‑CCGGGGCCATCATGGGTCGAGTAGCGTTGaa < 3:307173/139‑1 (MQ=255)
gTCGTGGGTCATACAGCAGATCCTGCGTGCGGGCGCGGCTTTCCGGGTTCTGACACCAGCGGCAGCCCAGCGAACAGCCTTTAAGAAATACGACCGTGCGGATA‑CCGGGGCCATCATGGGTCGAGTAGCGTTGAATATTg < 7:795231/140‑1 (MQ=255)
tCGTGGGTCATACAGCAGATACTGCGTGCGGGCGCGGCTTTCCGGGTTCTGACACCCGCGGCAGCCCCGCGAACAGCCGTTAAGAAATACGACCGTGCGGATA‑CCGGGGCCATCATGGGGCGAGTAGGGGTGAATAtt > 6:987002/1‑138 (MQ=255)
cGTGGGTCATACATCAGATCCTGCGTGCGGGCGCGGCTTTCCGGGTTCTGACACCAGCGGCAGCCCAGCGAACAGCCTTTAAGAAATACGACCGTGCGGATA‑CCGGGGCCATCATGGGTCGAGTAGCGTTGAATATTGaa < 8:208452/140‑1 (MQ=255)
cGTGGGTCATACAGCAGATCCTGCGTGCGGGCGCGGCTTTCCGGGTTCTGACACCAGCGGCAGCCCAGCGAACAGCCTTTAAGAAATACGACCGTGCGGATA‑CCGGGGCCATCATGGGTCGAGTAGCGTTGAATATTGaa < 7:52327/140‑1 (MQ=255)
cGTGGGTCATACAGCAGATCCTGCGTGCGGGCGCGGCTTTCCGGGTTCTGACACCAGCGGCAGCCCAGCGAACAGCCTTTAAGAAATACGACCGTGCGGATA‑CCGGGGCCATCATGGGTCGAGTAGCGTTGAATATTGaa < 3:670661/140‑1 (MQ=255)
cGTGGGTCATACAGCAGATCCTGCGTGCGGGCGCGGCTTTCCGGGTTCTGACACCAGCGGCAGCCCAGCGAACAGCCTTTAAGAAATACGACCGTGCGGATA‑CCGGGGCCATCATGGGTCGAGTAGCGTTGAATATTGaa < 1:1094512/140‑1 (MQ=255)
cGTGGGTCATACAGCAGATCCTGCGTGCGGGCGCGGCTTTCCGGGTTCTGACACCAGCGGCAGCCCAGCGAACAGCCTTTAAGAAATACGACCGTGCGGATA‑CCGGGGCCATCATGGGGCGAGTAGCGTTGAATATTGaa < 3:675873/140‑1 (MQ=255)
cGTGGGTCATACAGCAGATCCTGCGTGCGGGCGCGGCGTTCCGGGTTCTGACCCCAGCGGCAGCCCAGCGAACAGCCTTTAAGAAATACGACCGTGCGGATA‑CCGGGGCCATCATGGGTCGAGTAGCGTTGAATATTGaa < 3:276633/140‑1 (MQ=255)
tGGGTCATACAGCAGATCCTGCGTGCGGGCGCGGCTTTCCGGGTTCTGACACCAGCGGCAGCCCAGCGAACAGCCTTTAAGAAATACGACCGTGCGGATA‑CCGGGGCCATCATGGGTCGAGTAGCGTTGAATATTGaaaa < 3:703382/140‑1 (MQ=255)
tCATACAGCAGATCCTGCGTGCGGGCGCGGCTTTCCGGGTTCTGACACCAGCGGCAGCCCAGCGAACAGCCTTTAAGAAATACGACCGTGCGGATA‑CCGGGGCCATCATGGGTCGAGTAGCGTTGAATATTGAAAATCAt < 1:1088666/140‑1 (MQ=255)
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GGGCAGCAGTCGGTTAGCGCCGTAAAATGCTCCGGGGTTAACTTTTCCCGATGAATAAGCAAACCATTCAACGCGCGCTCAATCACTTCCGGTGCGGTCTTAGCGCACAGCTTACAGCCTTCCAGACAGAGTCGTGGGTCATACAGCAGATCCTGCGTGCGGGCGCGGCTTTCCGGGTTCTGACACCAGCGGCAGCCCAGCGAACAGCCTTTAAGAAATACGACCGTGCGGATA‑CCGGGGCCATCATGGGTCGAGTAGCGTTGAATATTGAAAATCAT > NZ_CP022686/4368203‑4368480
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| Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
N/A
