Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A10 F2 I0 R1
|
233 |
6461.8 |
9239822 |
98.3% |
9082745 |
135.7 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
freq |
annotation |
gene |
description |
| RA |
NZ_CP022686 |
4,368,341 |
T→G |
13.8% |
D47A (GAC→GCC) |
ybiY ← |
glycyl‑radical enzyme activating protein |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NZ_CP022686 | 4,368,341 | 0 | T | G | 13.8%
| 243.0
/ 8.1
| 148 | D47A (GAC→GCC) | ybiY | glycyl‑radical enzyme activating protein |
| Reads supporting (aligned to +/- strand): ref base T (50/74); new base G (19/5); total (69/79) |
| Fisher's exact test for biased strand distribution p-value = 6.14e-04 |
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 |
Only 100 of 149 total aligned reads displayed.
GGCAGCAGTCGGTTAGCGCCGTAAAATGCTCCGGGGTTAACTTTTCCCGATGAATAAGCAAACCATTCAACGCGCGCTCAATCACTTCCGGTGCGGTCTTAGCGCACAGCTTACAGCCTTCCAGACAGAGTCGTGGGTCATACAGCAGATCCTGCGTGCGGGCGCGGCTTTCCGGGTTCTGACACCAGCGGCAGCCCAGCGAACAGCCTTTAAGAAATACGACCGTGCGGATACCGGGGCCATCATGGGTCGAGTAGCGTTGAATATTGAAAATCA > NZ_CP022686/4368204‑4368479
|
ggCAGCAGTCGGTTAGCGCCGTAAAATGCTCCGGGGTTAACTTTTCCCGATGAATAAGCAAACCATTCAACGCGCGCTCAATCACTTCCGGTGCGGTCTTAGCGCACAGCTTACAGCCTTCCAGACAGAGTCGTGGGTCa < 1:597145/140‑1 (MQ=255)
ggCAGCAGTCGGTTAGCGCCGTAAAATGCTCCGGGGGTAACTTTTCCCGATGAATAAGCAAACCATTCACCGCGCGCTCAATCACTTCCGGTGCGGTCTTAGCGCACAGCTTACAGCCTTCCAGACAGAGTCGTGGGGCa > 2:1110439/1‑140 (MQ=255)
ggCAGCAGTCGGTTAGCGCCGTAAAAAGCTCCGGGGTTAACTTTTCCCGATGAATAAGCAAACCAATCAACGCGCGCTCAATCACTTCCGGTGCGGTCTTAGCGCACAGCTTACAGCCTTCCAGACAGAGTCGTGGGTcg > 2:331229/1‑139 (MQ=255)
cgcagTCGGGTAGCGCCGTAAAATGCTCCGGTGTTAACTTTTCCCGATGAATAAGCAAACCATTCAACGCGCGCGAAATCACTTCCGGTGCGGTCTTAGCGCACAGCTTACAGCCTTCCAGACAGAGTCGTGGGTCATAc < 1:956327/139‑1 (MQ=255)
agcagTCGGTTAGCGCCGTAAAATGCTCCGGGGTTAACTTTTCCCGATGAATAAGCAAACCATTCAACGCGCGCTCAATCACTTCCGGTGCGGTCTTAGCGCACAGCTTACAGCCTTCCAGACAGAGTCGTGGGTCATAc < 1:1088702/140‑1 (MQ=255)
agcagTCGGTTAGCGCCGTAAAATGCTCCGGGGTTAACTTTTCCCGATGAATAAGCAAACCATTCAACGCGCGCTCAATCACTTCCGGTGCGGTCTTAGCGCACAGCTTACAGCCTTCCAGACAGAGTCGTGGGTCATAc < 1:11775/140‑1 (MQ=255)
agcagTCGGTTAGCGCCGTAAAATGCTCCGGGGTTAACTTTTCCCGATGAATAAGCAAACCATTCAACGCGCGCTCAATCACTTCCGGTGCGGTCTTAGCGCACAGCTTACAGCCTTCCAGACAGAGTCGTGGGTCATAc < 7:333837/140‑1 (MQ=255)
agcagTCGGTTAGCGCCGTAAAATGCTCCGGGGTTAACTTTTCCCGATGAATAAGCAAACCATTCAACGCGCGCTCAATCACTTCCGGTGCGGTCTTAGCGCACAGCTTACAGCCTTCCAGACAGAGTCGTGGGTCATAc < 4:961845/140‑1 (MQ=255)
agcagTCGGTTAGCGCCGTAAAATGCTCCGGGGTTAACTTTTCCAGATGAATAAGCAAACCTTTCAACGCGCGCTCAATCACTTCCGGTGCGGTCTTAGCGCACAGCTTACAGCCTTCCAGACAGAGTCGTGGGTCATAc < 8:71416/140‑1 (MQ=255)
cagTCGGTTAGCGCCGTAAAATGCTCCGGGGTTAACTTTTCCCGATGAATAAGCAAACCATTCAACGCGCGCTCAATCACTTCCGGTGCGGTCTTAGCGCCCAGCTTACAGCCTTCCAGACAGAGTCGTGGGGCATAccg > 4:1125839/1‑138 (MQ=255)
cagTCGGTTAGCGCCGTAAAATGCTCCGGGGTTAACTTTTCCCGATGAATAAGCAAACCATTCAACGCGCGCTCAATCACTTCCGGTGCGGTCTTAGCGCACAGCTTACAGCCTTCCAGACAGAGTCGTGGGTCATAcag < 7:609915/140‑1 (MQ=255)
cagTCGGTTAGCGCCGTAAAATGCTCCGGGGTTAACTTTTCCCGATGAATAAGCAAACCATTCAACGCGCGCTCAATCACTTCCGGTGCGGTCTTAGCGCACAGCTTACAGCCTTCCAGACAGAGTCGTGGGGCATAcag > 4:616038/1‑140 (MQ=255)
cagTCGGTTAGCGCCGTAAAATGCTCAGGGGTTAACTTTTCCCGATGAATAAGCAAACCATTCACCGCGCGCTCAATCACTTCCGGTGCTGTCTTAGCGCACAGCTTACAGCATTCCAGACAGAGTCGTGGGTAAGAcag > 2:122799/1‑140 (MQ=255)
cagTCGGGTAGCGCCGTAAAATGCTCCGGGGTTAACTTTTCCCGATGAATAAGCAAACCATTCAACGCGCGCTCAATCACTTCCGGTGCGGTCTTAGCGCACAGCTTACAGCCTTCCAGACAGAGTCGTGGGTCATAcag < 1:97734/140‑1 (MQ=255)
gTCGGTTAGCGCCGTAAAATGCTCCGGGGTTAACTTTTCCCGATGAATAAGCAAACCATTCAACGCGCGCTCAATCACTTCCGGTGCGGTCTTAGCGCACAGCTTACAGCCTTCCAGACAGAGTCGTGGGTCATAccc > 6:457214/1‑136 (MQ=255)
gcgcCGTAAAATGCTCCGGGGTTAACTTTTCCCGATGAATAAGCAAACCATTCAACGCGCGCTCAATCACTTCCGGTGCGGTCTTAGCGCACAGCTTACAGCCTTCCAGACAGAGTCGTGGGTCATACCGCAGCTcca > 6:220022/1‑137 (MQ=255)
cgcCGTAAAATGCTCCGGGGTTAACTTTTCCCGATGAATAAGCAATCCATTCAACGCGCGCTCAATCACTTCCGGTGCGGTCTTAGCGCACAGCTTACAGCCTTCCAGACAGAGTCGTGGGTCATACAGCAGATACtgcg > 7:634631/1‑140 (MQ=255)
gTAAAATGCTCCGGGGTTAACTTTTCCCGATGAATAAGCAAACCATTCAACGCGCGCTCAATCACTTCCGGTGCGGTCTTAGCGCACAGCTTACAGCCTACCAGACAGAGTCGTGGGTCATAAAGCAGATCCtgcctt > 5:1102584/1‑135 (MQ=255)
tAAAATGCTCCGGGGTTAACTTTTCCCGATGAATAAGCAAACCATTCAACGCGCGCTCAATCACTTCCGGTGCGGTCTTAGCGCACAGCTTACAGCCTTCCAGACAGAGTCGTGGGTCATACAGCAGa > 7:413188/1‑128 (MQ=255)
tAAAATGCTCCGGGGTTAACTTTTCCCGATGAATAAGCAAACCATTCAACGCGCGCTCAATCACTTCCGGTGCGGTCTTAGCGCACAGCTTACAGCCTTCCAGACAGAGTCGTGGGTCATAAAGCAGCTACTGCGAGCgg > 7:894709/1‑140 (MQ=255)
tAAAATGCTCCGGGGTTAACTTTTCCCGATGAATAAGCAAACCATTCAACGCGCGCTCAATCACTTCCGGTGCGGTCTTAGCGCACAGCTTACAGCCTTCCAGACAGAGTCGTGGGGCATACAGCAGATCCTGCGTGCgg > 3:411882/1‑140 (MQ=255)
tAAAATGCTCCGGGGTAAACTTTTCCCGATGAATAAGCAAACCATTCAACGCGCGCTCAATCACTTCCGGTGCGTTCTTAGCGCACAGCTTACAGCCTTCCAGACAGAGTCGTGGGTCAAAACTCAGATACAGCGTGCgg > 8:449686/1‑140 (MQ=255)
aaaTGCTCCGGGGTTAACTTTTCCCGATGAATAAGCAAACCATTCAACGCGCGCTCAATCACTTCCGGTGCGGTCTTAGCGCACAGCTTACAGCCTTCCAGACAGAGTCGTGGGGCATACAGCAGATACTGCGTGCgg > 5:341293/1‑138 (MQ=255)
aTGCGCCGGGGTTAACTTTTCCCGATGAATAAGCAAACCATTCAACGCGCGCTCAATCACTTCCGGTGCGGTCTTAGCGCACAGCTTACAGCCTTCCAGACAGAGACGTGGGTCATACAGCAGATCCTGCGTGCGGgcgc < 3:700051/140‑1 (MQ=255)
tGCTCCGGGGTAAACTTAACCCGAGGACTAATCCAACACTTCAACGCGCGCTCAATCACTTCCGTTGCGGTCTTAGCTCACAGCTTACAGCCTTCCAGACAGAGTCGTGGGTCATACAGCAGATCCTGCGTGCGGgcg < 5:221018/138‑1 (MQ=255)
gCTCCGTGGTTAACTTTTCCCGATGAATAAGCAAACCATTCAACGCGCGCTCAATCACTTCCGGTGCGGTCTTAGCGCACAGCTTACAGCCTTCCAGACAGAGTCGTGGGGCATACAGCAGATCCTGCGTGCGGGCGCgg < 3:520073/140‑1 (MQ=255)
ggggTTAACTTTTCCCGATGACTAAGCAAACCATTCAACGAGCTCTCAATCTCTTCCGGTGCGGTCTTAGCGCACTGCTTACAGCCTTCCAGACAGAGTCGTGGGTCTTACAGCAGATCCTGCGTGCGGGCGCGGCTTTc < 7:172073/140‑1 (MQ=255)
ggggTTAACTTTTCCCGATGAATAAGCAAACCATTCAACGCGCGCTCAATCACTTCCGGTGCGGTCTTAGCGCACAGCTTACAGCCTTCCAGACAGAGTCGTTGGTCATACAGCAGATCCTGCTTTCGTGCGCGGCTTTc < 8:964552/140‑1 (MQ=255)
aaCTTTTCCCGATGAATAAGCAAACCATTCAACGCGCGCTCAATCACTTCCGGTGCGGTCTTAGCGCACAGCTTACAGCCTTCCAGACAGAGTCGTGGGGCAAACCGCAGCTACAACGGTCGGGCGCGGCTATACggggt > 7:738863/1‑138 (MQ=255)
ttCCCGTTGAATAAGCAAACCATTCAACGCGCGCTCAATCACTTCCGGTGCGGTCTTAGCGCACAGCTTACAGCCTTCCAGACAGAGTCGTGGGGGAGACAGGAGCTCCGTCGGGCGGGCGCGGGGTTCCggggtgtggc > 8:157504/1‑133 (MQ=255)
ccGATGAATAAGCAAACCATTCACCGCGCGCTCATTCACTTCCGGTGCGGTCTTAGCGCACAGCTTACAGCCTTCCAGACAGAGTCGTGGGTCATACAGCAGATCCTGCGTGCTGGAGCGGCTTTCCGGGTTCTGACAcc < 7:903310/140‑1 (MQ=255)
gAATAAGCAATCCATTCAACGCGCGCTCAATCACTTCCGGTGCGGTCTTAGCGCACAGCTTACAGCCTTCCAGACAGAGTCGTGGGTCATACAGCAGATCCTGCGTGCGGGCGCGGCTTTCCGGGTTCTGACACCAGCgg < 2:888628/140‑1 (MQ=255)
gAATAAGCAAACCATTCAACGCGCGCTCAATCACTTCCGGTGCGGTCTTAGCGCACAGCTTACAGCCTTCCAGACAGAGTCGTGGGTAATACAGCAGATCCTGGGTGCGGGCGCGGCGTTCCGGGTTCATACACCAGc > 5:407931/1‑138 (MQ=255)
caaTAAGCAAACCATTCAACGCGCGCTCAATCACTTCCGGTGCGGTCTTAGAGAACAGCTTACAGCATTCCAGACAGAGGCGGGGGTCATACAGCAGATCCTGCGTGCGGGCGCGGCTTTCCGGGTTCTGACACCAGCgg < 4:836725/139‑1 (MQ=255)
aaGCAAACCATTCAACGCGCGCTCAATCAGTTCCGGTGCGGTCTTTGCGCACAGCTTACAGCCTTCCAGACAGAGTCTTGGGTCTTAAAGCAGATCCTGCGTGCGGGCGCGGCTTTCCGGTTTCTGACACCAGCGGCAGc < 1:756256/140‑1 (MQ=255)
aGCAAACCATTCAACGCGCGCTCAATCACTTCCGGTGCGGTCTTAGCGCACAGCTTACAGCCTTCCAGACAGAGTCGTGGGTCATACAGCAGATCCTGCGTGCGGGCGCGGCTTTCCGGGTTCTGACACCAGCGGCAGcc < 8:1002545/140‑1 (MQ=255)
cAAACCATTCAACGCGCTCTCAATCACTTCCGGTGCGGTCTTAGCGCACAGCTTACAGCCTTCCAGACAGAGTCGTGGGTCATACAGCAGATCCTGCGTGCGGGCGCGGCTTTCCGGGTTCTGACACCAGCGGCAGCCCa < 1:360595/140‑1 (MQ=255)
cAAACCATTCAACGCGCGCTCAATCACTTCCGGTGCGGTCTTAGCGCACAGCTTACAGCCTTCCAGACAGAGTCGTGGGTCATACAGCAGATCCTGCGTGCGGGCGCGGCTTTCCGGGTTCTGACACCAGCGGCAGCCCa < 3:1085001/140‑1 (MQ=255)
aaaCCATTCAACGCGCGCTCAATCACTTCCGGTGCGGTCTTAGCGCACAGCTTACAGCCTTCCAGACAGAGTCGTGGGTCATACAGCAGATACTGCGTGCGGGCGCGGGTTTACCGGTTCTGCCACCCCCCGCAGccc > 5:518178/1‑138 (MQ=255)
aCCATTCAACGCGCGCTCAATCACTTCCGGTGCGGTCTTAGCGCACAGCTTACAGCCTTCCAGACAGAGTCGTGGGTCATACAGCAGATCCTGCGTGCGGGCGCGGCTTTCCGGGTTCTGacac > 7:250393/1‑124 (MQ=255)
aCCATTCAACGCGCGCTCAATCACTTCCGGTGCGGTCTTAGCGCACAGCTTACAGCCTTCCAGACAGAGTCGTGGGTCATACAGCAGATCCTGCGTGCGGGCGCGGCTTTCCGGGTTCTGacac < 8:250393/124‑1 (MQ=255)
aCCATTCAACGCGCGCTCAATCACTTCCGGTGCGGTCTTAGCGCACAGCTTACAGCCTTCCAGACAGAGTCGTGGGTCATACAGCAGATCCTGCGGGCGGGCGCGGCTTTTCGGGGTTGGACGCCAGCGGCAGCCCCGcc > 3:59673/1‑139 (MQ=255)
cATTCAACGCTCACTCTATCACATCCGTTGAGGACTTAGCGCACAGCTTACAGCCTTCCAGTCAGAGTCGTGGGTCATACAGCAGATCCTGCGTGCGGGCGCGTCTTTCCGGGTTCTGACACCAGCGGCAGCCCAGCGaa < 4:544475/140‑1 (MQ=255)
cATTCAACGCGCGCTCAATCACTTCCGGTGCGGTCTTAGCGCACAGCTTACCGCCTTCCAGACAGAGTCGTGGGTCATACAGCAGATCCTGCGTGCGGGCGCGGCTTTCCGGGTTCTGACACCAGCGGCAGCCCAGCGaa < 8:514795/140‑1 (MQ=255)
cATTCAACGCGCGCTCAATCACTTCCGGTGCGGTCTTAGCGCACAGCTTACAGCCTTCCAGACAGAGTCGTGGGTCATACAGCAGATCCTGCGTGCGGGCGCGGCTTTCCGGGTTCTGACACCAGCGGCAGCCCAGCGaa < 2:1069790/140‑1 (MQ=255)
cATTCAACGCGCGCTCAATCACATCCGGTGCGGTCTTAGCGCACAGCTTACAGCCTTCCAGACAGAGTCGTGGGTCATACAGCAGATCCTGCGTGCGGGCGCGGCTTTCCGGGTTCTGACACCAGCGGCAGCCCAGCGaa < 2:639791/140‑1 (MQ=255)
ttCAACGCGCGCTCAATCACTTCCGGTGCGGTCTTAGCGCACAGCTTACAGCCTTCCAGACAGAGTCGTGGGTCATACAGCAGATCCTGCGTGCGGGCGCGGCTTTCCGGGTTCTGACACCAGCGGCAGCCCAGCGAACa < 1:921733/140‑1 (MQ=255)
tCAACGCGCGCTCAATCACTTCCGGTGCGGTCTTAGCGCACAGCTTACAGCCTTCCAGACAGAGTCGTGGGTAATACAGCAGATCCTGCCTGCGGGCGCGGCAGTGCGGGTTCTTAAACCATCGGCCGCCCAGccgcaag > 2:401143/1‑134 (MQ=255)
cgcgcgCTCAATCACTTCCGGTGCGGTCTTAGCGCACAGCTTACAGCCTTCCAGACAGAGTCGTGGGTGATACAACAACAACTGCGGTCGGGCGCGGCTTTACGGGTTCTGACCCCAGCGGCAGCCCAGCGCACAGCCtt > 1:648910/1‑140 (MQ=255)
cgcgcTCAATCACTTCCGGTGCGGTCTTTGCGCACAGCTTACAGCCTTCCAGACAGAGTCGTGGGTCATACAGCAGATCCTGCGTGCGGGCGCGGCTTTCCGGGTTCTGACACCAGCGGCAGCCCAGCGAACAGCCTTTa < 3:267252/140‑1 (MQ=255)
cgcgcTCAATCACTTCCGGTGCGGTCTTAGCGCACAGCTTACAGCCTTCCAGACAGAGTCGTGGGTCATACAGCAGATCCTGCGTGCGGGCGCGGCTTTCCGGGTTCTGACACCAGCGGCAGCCCAGCGAACAGCCTTTa < 3:339430/140‑1 (MQ=255)
cgcgcTCAATCACTTCCGGTGCGGTCTTAGCGCACAGCTTACAGCCTTCCAGACAGAGTCGTGGGTCATACAGCAGATCCTGCGTGCGGGCGCGGCTTTCCGGGTTCTGACACCAGCGGCAGCCCAGCGAACAGCCTTTa < 3:703269/140‑1 (MQ=255)
cgcgcTCAATCACTTCCGGTGCGGTCTTAGCGCACAGCTTACAGCCTTCCAGACAGAGTCGTGGGTCATACAGCAGATCCTGCGTGCGGGCGCGGCTTTCCGGGTTCTGACACCAGCGGCAGCCCAGCGAACAGCCTTTa < 4:346575/140‑1 (MQ=255)
cgcgcTCAATCACTTCCGGTGCGGTCTTAGCGCACAGCTTACAGCCGTCCAGACAGAGTCGGGGGTCATACAGCAGATCCTGCGTGCGGGCGCGGCTTTCCGGGTGCTGACACCAGCGGCAGCCCAGCGAACAGCCTTTa < 2:517133/140‑1 (MQ=255)
gcgcTCAATCACTTCCGGTGCGGTCTTAGCGCACAGCTTACAGCCTTCCAGACAGAGTCGTGGGTCATAAACCAGATACTGCGTGCGGGCGCGGGGTTCCGGGTTATTACACCAGCGGCCGCCCAGCGAACAGCCGTTaa > 2:494683/1‑140 (MQ=255)
cgcTCAATCACTTCCGGGGCGGTCTTAGCGCACAGCTTACAGCTTTCCCGACAGAGGCGTGGGGCATACAGCTGATCCTGCGTGGGGGCGCGGCTTTCCGGGTTCTGACACCAGCGGCAGCCCTGCGAACAGCCTTTAAg < 1:455615/140‑1 (MQ=255)
aaTAACTTCCGGTGCGGTCTTAGCGCACAGCTTACAGCCTTCCAGACAGAGTCGTGGGTCATACAGCAGATCCTGCGTGCGGGCGCGGCTTTCCGGGTTCTGACACCAGCGGCAGCCCAGCGAACAGCCTTTAAGAAATa < 2:104662/140‑1 (MQ=255)
tCACTTCCGGTGCGGTCTTAGCGCACAGCTTACAGCCTTCCAGACAGAGTCGTGGGTCATACAGCAGATCCTGCGTGCGGGCGCGGCTTTCCGGGTGCTGACACCAGCGGCAGCCCAGCGAACAGCCTTTAAGAAATa < 6:151915/138‑1 (MQ=255)
cACTTAGGGTGCGGTCTTAGCGCACAGCTTACAGCCTTCCAGACAGAGTCGTGGGTCATACAGCAGATCCTGCGTGCGGGCGCGGCTTTCCGGGTTCTGACACCAGCGGCAGCCCAGCGAACAGCCTTTAAGAAATACGa < 7:170096/140‑1 (MQ=255)
ccTTCCGGTGCGTTCTTAGCGCACAGCTTACAGCCTTCCAGACAGAGTCGTGGGTCATCCAGCCGATCCTGCGTGCGGGCGCGGCTTTCCGGGTTCTGACACCAGCGGCAGCCCAGCGAACAGCCTTTAAGAAATACGAc < 2:63701/139‑1 (MQ=255)
aCTTCCGGTGCGGTCTTAGCTCACAGCTTACAGCCTTCCAGACAGAGTCGTGGGGCATACAGCAGATCCTGCGTGCGGGCGCGGCTTTCCGGGTTCTGACACCAGCGGCAGCCCAGCGAACAGCCTTTAAGAAATACGAc < 7:229269/140‑1 (MQ=255)
aCTTCCGGTGCGGTCTTAGCGCACAGCTTACAGCCTTCCAGCCATAGTCGTGGGTCATACAGCAGATCCTGCGTGCGGGCGCGGCTTTCCGGGGTCTGACACCAGCGGCAGCCCAGCGAACAGCCTTTAAGAAATACg < 6:792823/138‑1 (MQ=255)
aCTTCCGGTGCGGTCTTAGCGCACAGCTTACAGCCTTCCAGACAGAGTCGTGGGTCATACAGCAGATCCTGCGTGCGGGCGCGGCTTTCCGGGTTCTGACACCAGCGGCAGCCCAGCGAACAGCCTTTAAGAAATACGAc < 4:775294/140‑1 (MQ=255)
ttCCGGTGCGGTCTTAGCGCACAGCTTACAGCCTTCCAGACAGAGTCGTGGGTCATACAGCAAATACTGCGTGCGGGCGCGGCTTTCCGGGTTCTGACACCCGCGGCCGCCCCGCGAACCTCCATTAAGAAATACGcccc > 2:1116479/1‑139 (MQ=255)
ccGGTGCGGTCTTAGCGCACAGCTTACAGCCTTCCAGACAGAGTCGTGGGTCATACAGCAGATCCTGCGTGCGGGCGCGGCTTTCCGGGTTCTTACACCAGCGGCAGCCCAGCGAACACCCTTTAAGAAATACGAccc > 6:555938/1‑137 (MQ=255)
ccGGTGCGGTCTTAGCGCACAGCTTACAGCCTTCCAGACAGAGTCGTGGGTCATACAGCAGATCCTGCGTGCGGGCGCGGCGTTCCGGGGTGTGCCACCCGCGGCAGCCCACCGAACAGCCTTTAAGAAATACGACCGTg > 4:1000297/1‑140 (MQ=255)
ggTGCGGTCTTAGCGCACAGCTTACAGCCTTCCAGACAGAGTCGTGGGTCATACAGCAGATACTGCGTGCGGGCGCGGCTTTCCGGGTTCTGACACCAGCGGCAGCCCAGCGCACAGCCTTTAATAAATACGACCGTGCg > 3:594678/1‑140 (MQ=255)
ggTGCGGGCTTAGCGAACATCTTACAGCCTTCCAGACCGAGTCGTGGGTCATAAAGCAGATCCTGCGTGCGGGCGCGGCTTTCCGGGTTCTTACACCAGCGGCAGCCCAGCGAACAGCCTTTAAGAAATAAGACCGTg < 6:666999/138‑1 (MQ=255)
gTGCGGTCTTAGCGCACAGCTTACAGCCTTCCAGACAGCGTCGTGGGTCATACAGCAGATCCTGCGTGCGGGCGCGGCTTTCCGGGTTCTGACACCAGCGGCAGCCCAGCGAACAGCCTTTAAGAAATACGACCGTGc < 5:972142/138‑1 (MQ=255)
tGCGGTCTTAGCGCACAGCTTACAGCCTTCCAGACAGAGTCGTGGGGGATACAGCAGATACTTCGTTCGGGCGCGGCTTTACGGGTTATTACACCAGCGGCCGCCCAGCGGCACGCCTTTAATAAATACCCCCGTGccgc > 8:86745/1‑137 (MQ=255)
acaggTCTTAGCGCACTGCTTACAGCCTTCCAGACAGAGTCGTGGGTCATACAGCAGATCCTGCGTGCGGGCGCGGCTTTCCGGGTTCTGACACCCGCGGCAGCCCAGCGAACAGCCTTAAAGAAATACGACCGTGCg < 5:616184/135‑1 (MQ=255)
gtgcTTAGCGCACAGATTACAGCCTTCCAGACAGAGTCGTGGTTCATACAGCAGATCCTGCGTGCGGGAGCGGCTTTCCGGGTTCTGACACCAGCGGCAGCCCAGCGAACAGCCTTTAAGAAATACGACCGTGCGGAt < 6:683514/135‑1 (MQ=255)
gcTTAGCGCACAGCTTACAGCCTTCCAGACAGAGTCGTGGGTGATACTGCCGATCCTGCGTGCGGGCGCGGCTTTCGGGGTTCTGACACCAGCGTCAGCCCAGCGAACAGCCTTTAAGAAAGACGACCGTGCGGATACCg < 4:267915/139‑1 (MQ=255)
ttgcgcACAGCTTACAGCCTTCCATCCAGTGTCGTGGGTCATACAGCAGATCCTGCGTGCGGGCGCGGCTTTCCGGGTTCTGACACCAGCGGCAGCCCAGCTAACAGCCTTTAAGAAATACGACCGTGCGGATACCgggg < 1:1163329/138‑1 (MQ=255)
tAGCGCACAGCTTACAGCCTTCCAGACAGAGTCGTGGGTCATACAGCAGATCCTGCGTGCGGGCGCGGCTTTCCGGGTTCTGACACCAGCGGCAGCCCAGCGAACAGCCTTTAAGAAATACGACCGTGCGGATACCgg < 5:514752/138‑1 (MQ=255)
tAGCGAACAGCTTACAGCCTTCCAGACAGAGTCGTGGGTCATACAGCAGATCCTGCGTGCGGGCGCGGCTTTCCGGGTTCTGACACCACCGGCAGCCCAGCGAACAGCCTTTAAGAAATACGACCGTGCGGATACCgg < 6:653136/138‑1 (MQ=255)
cacaGCTTACAGCCTTCCAGACAGTGTCGTGGGTCATACAGCAGATCCTGCGTGCGGGCGCGGCTTTCCGGGTTCTGACACCAGCGGCAGCCCAGCGAACAGCCTTTATGAAATACGACCGTGCTGATACCGGGGCcatc < 2:322001/140‑1 (MQ=255)
cacaGCTTACAGCCTTCCAGACAGCGTCGTGGGTCATACAGCAGATCCTGCGTGCGGGCGCGGCTTTCCGGGTTCTGACACCAGCGGCAGCCCAGCGAACAGCCTTTAAGAAATACGACCGTGCGGATACCGGGGCcatc < 8:237073/140‑1 (MQ=255)
cacaGCTTACAGCCTTCCAGACAGAGTCGTGGGTCATACAGCAGATCCTGCGTGCGGGCGCGGCTTTCCGGGTTCTGACACCAGCGGCAGCCCAGCGAACAGCCTTTAAGAAATACGACCGTGCGGATACCGGGGCcatc < 8:199403/140‑1 (MQ=255)
caGCTTACAGCCTTCCAGACAGAGTCGTGGGTCATGCACCCGAAACTGCGTGGGGGCGCGGCTTTGCGGGTTGTGACCCCCCCGGCAGCCCCGCGAACAGCCAGTTAGATAAAAGACCGATGGGCGACCGGGGcccacat > 8:591222/1‑135 (MQ=255)
caGCTTACAGCCTTCCAGACAGAGTCGTGGGTCATACAGCAGATCCTGCGTGCGGGCGCGGCTTTCCGGGTTCTGACACCAGCGGCAGCCCAGCGAACAGCCTTTAAGAAATACGACCGTGCGGATACCGGGGCcatcat < 2:754449/140‑1 (MQ=255)
caGCTTACAGCCTTCCAGACAGAGTCGTGGGTCATACAGCAGATCCTGCGTGCGGGCGCGGCTTTCCGGGTTCTGACACCACCGGCAGCCCAGCGCACCGCCGTTAAGAAATACGACCGGGCGGATACCGGGGCcatcaa > 2:867172/1‑139 (MQ=255)
caGCTTACAGCCTTCCAGACAGAGTCGTGGGTCATACAGCAGATCCTGCGTGCGGGCGCGGCTTTACGGGTTCTGACACCAGCGGCAGCCCCGCGCACAGCCGTTAAGAAATACGCCCCTGCGGATACCGGGGCcctcaa > 4:765292/1‑139 (MQ=255)
caGCTTACAGCCTTCCAGACAGAGTCGTGGGTCATACAGCAGATCCTGCGTGCGGGCGCCGGGTTACGGGGTCTTACCCCAGCGGCAGCCCCGCGAACAGCCGTTAAGAAATACGACCGTGCGGGTCCCGGGGCcatcaa > 8:204935/1‑139 (MQ=255)
caGCTTACAGCCTTCCAGACAGAGTCGTGGGTCATACAACATATCCTTCCTGCGGGCCCGGCTTTCCCGGTTATTAACACAGCGGCAGCCCAGAGAACAGCCCTTAAGAAAAACGAAAGAGCGGCTAACGGGGGcatcat > 2:1089180/1‑140 (MQ=255)
gCTTACAGCCTTCCAGACAGAGTCGTGGGTGATACAGCAGCTCCTGCGTGCGGGCGCGGGTTTGCGGGGTCTGACACCACCGGCAGCCCAGCGAACAGCCGTTAAGAAAAAAGAACGTGCGGATACCGGGGCCATCATgg > 8:574769/1‑140 (MQ=255)
gCTTACAGCCTTCCAGACAGAGTCGTGGGGGATAAAGCAGATCCTGCGGGCGGGCGCGGCGTTGCGGGTTGTGACACCCGCGGCCGCCCCGCGAACAGCCGTTAATAAATACGACCGTGCGGATACCGGGGCCATCATgg > 4:956888/1‑140 (MQ=255)
gCTTACAGCCTTCCAGACAGAGTCGTGGGGCAAACACCAGATCCAGCGTGCGGGCGCGGCTTTCCCGGTTATGGCACCACCGGGCGCCCAGCGCACACCCTATAAGAAAAAACACCGTGGGGAAACCCCGGcccccgg > 6:616184/1‑133 (MQ=255)
cttaacgCCTTCCAGACAGAGGCGTGGGTCATACAGCAGAGCCTGCGTGCGGGCGCGGCTTTCCGGGTTCTGACACCAGCGGCAGCCCAGCGAACAGCCTTTAAGAAATACGACCGTGCGGATACCGGGGCCATCATg < 6:1066023/132‑1 (MQ=255)
cTTACAGCCTTCCAGACAGAGTCGTGGGTCATACAGCAGATCCTGCGTGCGGGCGCGGCTTTCCGGGTTCTGACACCAGCGGCAGCCCAGCGAACAGCCTTTAAGAAATACGACCGTGCGGATACCGGGGCCATCATg < 6:523936/138‑1 (MQ=255)
attACAGCCTTCCAGACAGAGTCGTTGGTCATACAGCAGATCCTGCGTGCGGGCGCGGCTTTCCGGGTTCTGACACCAGCGGCAGCCCAGCGAACAGCCTTTAAGAAATACGACCGTGCGGATACCGGGGCCATCATg < 5:499587/137‑1 (MQ=255)
tCCAGACAGAGTCGTGGGTGATTCAGCAGCTCCAGCGTGCGGGCGCGGGGTTGCGGGGTATGCCCCCAGCGGCCGCCCAGCGCACAGCCGTTAAGAAATAAGACCCTGCGGAGACCCGGGCCCGAAAGGGTCGAGTAGCg > 2:38492/1‑140 (MQ=255)
tCCAGACAGAGTCGTGGGTCATAAAGCAGATCCTGCGTGCGGGCGCGGCTTTACGGGTTCTGACACCAGCCGCAGCCCAGCGCACAGCCGTTAAGAAATACGCCCGTGCGGATACCGGGGCCATCATGGGTCGAGTAGCg > 8:380576/1‑140 (MQ=255)
tCCAGACAGAGTCGTGGGTCAAACCGCACATCCAGAGAGCGGGCGCGGCATTCCGGGTTCGTACACCCGCCGCACCCCACGGAACCGCCCTGTATATATACGACACTGCGGAAACCGGTGCCAAAAGGGGTCGAGGAGCg > 2:707094/1‑140 (MQ=255)
tCCAGACAGAGTCGTGGGGCATACAGCAGATCCTGCGGGCGGGCGCGGCTTTCCGGGGTCTGCCACCAGCGGCAGCCCAGCGAACAGCCAGTAAGAAATAAGACCGTGCGGTTAACGGGGCCATAATGGGGCGAGTAGCg > 8:1085695/1‑140 (MQ=255)
tCCAGACAGAGTCGTGGGGCATAAAGCAGATCCTGCGTGCGGGCGCGGCGTTGCCGGTTCTGACACCAGCGGCAGCCCAGCCAACAGCCGTTAATAAATACGCCCGTGCGGATACCCGGGGCCTCATGGGTCGAGTAGCg > 4:355996/1‑140 (MQ=255)
agagTCGTGGGTACTACCGCAGAGCCTGCGTGCGGGCGCGGATTTCCGGGTTCTGACACCAGCGGCAGCCCAGCTACCAGCCTTTAAGAAATACGACCGTGAGTATACCGGGGCCATCATGGGTCGAGTAGCGTTGAata < 3:464504/140‑1 (MQ=255)
agTCGTGGGTCATACAGCAGATCCTGCGTGCGGGCGCGGGGTTACGGGTTCTGACACCAGCGGCAGCCCAGCGAACAGCCTTTAAGAAATACGACCGGGCGGATACCGGGGCCATCATGGGTGGAGTAGCGTTGTATAtt > 4:260827/1‑140 (MQ=255)
gggTCATACAGCAGATCCTGCGTGCGGGCGCGGCTTTCCGGGTTCTGACACCAGCGGCAGCCCAGCGAACAGCCTTTAAGAAATACGACCGTGCGGATACCGGGGCCATCATGGGTCGAGTAGCGTTGAATATTGAAAAt < 8:669584/140‑1 (MQ=255)
gTCATACAGCAGATCCTGCGTGCGGGCGCGGCTTTCCGGGTTCTGACACCAGCGGCAGCCCAGCGAACAGCCTTTAAGAAATACGACCGTGCGGATACCGGGGCCATCATGGGTCGAGTAGCGTTGAATATTGAAAATCa < 8:310701/140‑1 (MQ=255)
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GGCAGCAGTCGGTTAGCGCCGTAAAATGCTCCGGGGTTAACTTTTCCCGATGAATAAGCAAACCATTCAACGCGCGCTCAATCACTTCCGGTGCGGTCTTAGCGCACAGCTTACAGCCTTCCAGACAGAGTCGTGGGTCATACAGCAGATCCTGCGTGCGGGCGCGGCTTTCCGGGTTCTGACACCAGCGGCAGCCCAGCGAACAGCCTTTAAGAAATACGACCGTGCGGATACCGGGGCCATCATGGGTCGAGTAGCGTTGAATATTGAAAATCA > NZ_CP022686/4368204‑4368479
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| Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
N/A
