Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A6 F13 I0 R1
|
235 |
6960.4 |
9135780 |
98.4% |
8989607 |
135.7 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
freq |
annotation |
gene |
description |
| RA |
NZ_CP022686 |
4,368,341 |
T→G |
16.0% |
D47A (GAC→GCC) |
ybiY ← |
glycyl‑radical enzyme activating protein |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NZ_CP022686 | 4,368,341 | 0 | T | G | 16.0%
| 178.3
/ 6.1
| 118 | D47A (GAC→GCC) | ybiY | glycyl‑radical enzyme activating protein |
| Reads supporting (aligned to +/- strand): ref base T (34/61); new base G (18/4); total (52/66) |
| Fisher's exact test for biased strand distribution p-value = 1.05e-04 |
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 |
Only 100 of 120 total aligned reads displayed.
CGGGCAGCAGTCGGTTAGCGCCGTAAAATGCTCCGGGGTTAACTTTTCCCGATGAATAAGCAAACCATTCAACGCGCGCTCAATCACTTCCGGTGCGGTCTTAGCGCACAGCTTACAGCCTTCCAGACAGAGTCGTGGGTCATACAGCAGATCCTGCGTGCGGGCGCGGCTTTCCGGGTTCTGACACCAGCGGCAGCCCAGCGAACAGCCTTTAAGAAATACGACCGTGCGGATACCGGGGCCATCATGGGTCGAGTAGCGTTGAATATTGAAAA > NZ_CP022686/4368202‑4368476
|
ggggCAGCAGTCGGTTAGCGCCGGAACATGCTCCGGGGTTAACTTTTCCCGATGAATACGCAAACCATTCAACGCGCGCTCAATCACTTCCGGTGCGGTCTTAGCGCACAGCTTACAGCCTTCCAGACAGAGGCGTGGGt < 6:704102/139‑1 (MQ=255)
cagcagTCGGTTAGCGCCGTAAAATGCTCCGGGGTTAACTTTTCCCGATGAATAAGCAAACCATTCAACGCGCGCTCAATCACTTCCGGTGCGGTCTTAGCGCACAGCTTACAGCCTTCCAGACAGAGTCGTGGGTCATa < 2:607367/140‑1 (MQ=255)
cagcagTCGGTTAGCGCCGTAAAATGCTCCGGGGTTAACTTTTCCCGATGAATAAGCAAACCATTCAACGCGCGCTCAATCACTTCCGGTGCGGTCTTAGCGCACAGCTTACAGCCTTCCAGACAGAGTCGTGGGGCa > 4:136723/1‑138 (MQ=255)
agcagTCGGTTAGCGCCGTAAAATGCTCCGGGGTTAACTTTTCCCGATGAATAAGCAAACCATTCAACGCGCGCTCAATCACTTCCGGTGCGGTCTTAGCGCACAGCTTACAGCCTTCCAGACAGAGTCGTGGGTCAt < 3:581571/138‑1 (MQ=255)
agcagTCGGTTAGCGCCGTAAAATGCTCCGGGGTTAACTTTTCCCGATGAATAAGCAAACCATTCAACGCGCGCTCAATCACTTCCGGTGCGGTCTTAGCGCACAGCTTACAGCCTTCCAGACAGAGTCGTGGGTCATAc < 1:570626/140‑1 (MQ=255)
gcagTCGGTTAGCGCCGTAAAATGCTCCGGGGTTAACTTTTCCCGATGAATAAGCAAACCATTCAACGCGCGCTCAATCACTTCCGGTGCGGTCTTAGCGCACAGCTTACAGCCTTCCAGACAGAGTCGTGGGttaaa > 4:192325/1‑134 (MQ=255)
cagGCGGTTAGCGCCGTAAAATGCTCCGGGGTTAACTTTTCCCGATGAATAAGCACACCATTCAACGCGCGCTCAATCACTTCCGGTGCGTTCTTAGCGCACAGCTTACAGCCTTCCAGACAGAGTCGTGGGTCATAcag < 7:991070/140‑1 (MQ=255)
gcgcCGTAAAATGCTCCGGGGTTAACTTTTCCCGATGAATAAGCAAACCATTCAACGCGCGCTCAATCACTTCCGGTGCGGTCTTAGAGACCAGCTTACAGCCTTCCAGACAGAGTCGTGGGGCAGAAAGCAGATCCagc > 5:1006887/1‑140 (MQ=255)
gcgcCGTAAAATGCTCCGGGGTTAACTTATCCCGATGAATAAGCAAACCATTCAACTCGCGCTCAATCACTTCCGGTGCGGTCTTAGCGCACAGCTTACAGCATTCCAGACAGAGTCGTGGGTCATAAAACAGATACtgg > 2:1005417/1‑139 (MQ=255)
ccagTAAAATGCTCCGGGGTTAACTTTTCCCGATGATTAAGCAAACCATTAATCGAGCGCTAAATAACTTCCGGTGCTGTCTTAGCGCACAGCTTACAGCCTTCCAGACAGAGTCGTGGGACATACAGCAGATCCttcgt < 6:349842/137‑1 (MQ=255)
tAAAATGCTCCGGGGTTAACTTTTCCCGATGAATAAGCACACAATTCAACGCGCGCTCAATCACTTCAGGTGCTGTCGTAGCGCACAGCGTACAGCCTTCCAGACAGAGTCGGGGGTCATACATCAGCTCCTGAGTTCgg > 8:873896/1‑140 (MQ=255)
aaaaTGCTCCGGGGTTAACTTTTCCCGATGAATAAGCAAACCATTCAACGCGCGCTCAATCACTTCCGGTGCGGTCTTAGCGCACAGCTTACAGCCTTCCAGACAGAGTCGTGGGTCATACAGCAGATCCTGCGTGCggg < 7:1089912/140‑1 (MQ=255)
aTGCTCCGGGGTTAACTTTTCACGATGAATAAGCAAACCATTCAACGCGCGCTCAATCACTTCCGGTGCGGTCTTAGCTCACAGATTACAGCCTTCCAGACAGAGTCGTGGTTCATACAGCAGATCCTGCGTGCGTgcgc < 5:977230/140‑1 (MQ=255)
aTGCTCCGGGGGTAACTTTTCCCGATGAATAAGCAAACCATTCACCGCGCGCTCAATCACTTCCGGGGCGGTCTTAGCGCACAGCTTACAGCCTTCCAGACAGAGTCGTGGGTCATACAGCAGATCCTGCGTGCGGgcgc < 5:1072765/140‑1 (MQ=255)
aTGCGCCGGTTTTAACTTTTCCCGATGAATATGCAAACCAATCAACGCGCGCTCAATCACTACCGGCGCGGTCTTAGCGCACAGCTTACAGCCTTCCAGACAGAGTCGTGGGTCATACAGCAGATCCTGCGTGCGGgcgc < 2:1116963/140‑1 (MQ=255)
tCCGGGGTTAACTTTTCCCGATGAAAAAGCAAAACCTTCAACGCGCGCGCCATCACTTCCGGTGCGGTCATAGCGCACAGCTTACCGCCTTCCAGACAGAGTCGTGGGTCATACACCCGATACAGCCGGCGGGGGCCGcg > 6:476418/1‑139 (MQ=255)
cGGGGTTAACTTTTCCCGATGAATAAGCAAACCATTCAACGCGCGCTCAATCACTTCCGGTGCGGTCTTAGCGCACAGCTTACAGCCTTCCAGACAGAGTCGTGGGTCATAAAGCAGATCCTGCGTGCGGGCGCggggtt > 5:412378/1‑136 (MQ=255)
cGGGGTTAACTTTTCCCGATGAATAAGCAAACCATTCAACGCGCGCTCAATCACTTCCGGTGCGGTCTTAGCGCACAGCTTACAGCCTTCCAGACAGAGTCGTGGGGGATACAGCAGATCCAGCgggcgggggcggggtt > 1:1022276/1‑136 (MQ=255)
gggTTAACTTTTCCCGATGAATAAGCAAACCATTCAACGCGCGCTCAATCACTTCCGGTGCGGTCTTAGCGCACAGCTTACAGCCTTCCAGACAGAGTCGTGGGTCATACAGCAGATCCTGCGTGCGGGCGCGGCTTTcc < 6:919032/140‑1 (MQ=255)
gggTTAACTTTTCCCGATGAATAAGCAAACCATTCAACGCGCGCTCAATCACTTCCGGTGCGGTCTTAGCGCACAGCTTACAGCCTTCCAGACAGAGTCGTGGGTCATAAACCAGATCCAGCGTGCGGGCGCggggtt > 3:578876/1‑134 (MQ=255)
gggTTAACTTTTCCCGATGAATAAGCAAACCATTCAACGCGCGCTCAATCACTTCCGCTGCGGTCTTAGCGCACAGCTTACAGCCTTCCAGACAGAGTCGTGGGGCATAAAGCAGATCCTGCGTGCGGGCGCGGGttt > 4:1062224/1‑138 (MQ=255)
ggTTAACTTTTCCCGATGAATAAGCAAACCATTCAACGCGCGCTCAATCACTTCCGGTGCGGTCTTAGCGCACAGCTTACAGCCTTCCAGACAGAGTCGTGGGTCATACAGCAGATCCTGCGTGCGGGCGCGGCTTTCCg < 2:854620/140‑1 (MQ=255)
cTTTTCCCGATGAATAAGCAAACCATTCAACGCGCGCTCAATCACTTCCGGTGCGGTCTTAGCGCACAGCTTACAGCCTTCCAGACAGAGTCGTGGGTGATACAGCAGATCCTGCGTGCGGGCGCGGCTTTACggggt > 4:345549/1‑136 (MQ=255)
attttCCCGATGAATAAGCAAACCATTCAACGCGCGCTCAATCACTTCCGGTGCGGTCTTAGCGCACAGGTTACATCATTCCAGACAGAGTCGTGGGTCATACAGCAGATCCTGCGTGCGGGCGCGGCTTTCCGGGTTCt < 1:460131/139‑1 (MQ=255)
tCCCGATGAATAAGCAAACCATTCAACGCGCGCTCAATCACTTCCGGTGCGGTCTTAGCGCACAGCTTACAGCCTTCCAGACAGAGTCGTGGGTCATACAGCAGCTCCAGCGTGCCGGCGCCGCTTTCCGGGTTATGaac > 8:1002715/1‑138 (MQ=255)
ccGATGTATAAGCAAAGCATTCAAAGCGCGCTCAATCACTTCCGGAGCGGTCTTAGCGCACAGCTTACAGCCTTCCAGAGAGAGTCGTGGGTCATACAGCAGATCCTGCGTGCGGGCGCGGCTTTCCGGGTTCTGACAcc < 2:429465/140‑1 (MQ=255)
caaaacgCACACCATTCAACGCGCGCTCAATCACTTCCGGTGCGGCCTTAGCGCACAGCTTACAGCCTTCCCGACAGAGGAGGGTGTCATACAGCAGATCCTGCGTGCGGGCGCGGCTTTCCGGGTTCTGACACCAGCgg < 6:285312/134‑1 (MQ=255)
aTAAGAAAACCATTCAACGCGCGCTCAATCACTTCCGGTGCGGTCTTTGCGCACAGCTTACAGCCTTCCAGACAGAGTCGGGGGTCATACAGCAGATCCTGCGTGCGGGCGCGGCTTTCCGGGTTCTGACACCAGCGGCa < 8:140511/140‑1 (MQ=255)
aCCATTCAACGCGCGCTCAATCACTTCCGGTGCGGTCTTAGCGCACAGCTTACAGCCTTCCAGACAGAGTCGTGGGTCAAAAAGCAGATACTGCGTGCGGGCGCCGCATTGCCGGTTCTTACCACAGCCGCAcccacgcg > 1:753828/1‑135 (MQ=255)
cATTCACCGCGCGCTCAATCACTTCCGGTGCGGTCTTAGCGCACAGCTTACAGCCTTCCAGACAGAGTCGTGGGTCATACAGCAGATCCTGCGTGCGGGCGCGGCTTTCCGGGTTCTGACACCAGCGGCAGCCCAGCTaa < 8:99117/140‑1 (MQ=255)
cATTCAACGCGCGCTCAATCTCTTCCGGTGCGGTCTTAGCGCACAGCTTACAGCCTTCCAGACAGAGTCGTGGGTCATACAGCAGATCCTGCGTGCGGGCGCGGCTTTCCGGGTTCTGACACCAGCGGCAGCCCAGCGaa < 7:775541/140‑1 (MQ=255)
cATTCAACGCGCGCTCAATCCCATCCGGTGCGGTCTTAGCGCACAGCTTACAGCCTTCCAGACAGCGTCGTGGGTCATACAGCAGATCCTGCGTGCGGGCGCGGCTTTCCGGTTTCTGACACCAGCGGCAGCACAGCGaa < 6:640128/140‑1 (MQ=255)
cATTCAACGCGCGCTCAATCACTTCCGGTGCGGTCTTAGCGCACAGCTTACAGCCTTCCAGACAGAGTCGTGGGTCCTACAGCAGATCCTGCGTGCGGGCGCGGCTTTCCGGGGTCTGACCCCCGCGGCCGCCCAGcc > 4:27311/1‑137 (MQ=255)
cATTCAACGCGCGCTCAATCACTTCCGGTGCGGGCTTAGCGCACAGCTTACAGCCTTCCAGACAGAGTCGTGGGGCATACAGCAGATCCTGCGTGCGGGCGCGGCTTTCCGGGTTCTGACACCAGCGGCAGCCCAGCGaa < 5:240269/140‑1 (MQ=255)
aTTCAACGCGCGCTCAATCACTTCCGGTGCGGTCTTAGCGCACAGCTTACAGCCTTCCAGACAGAGTCGTGGGTCATACAGCAGATCCTGCGTGCGGGCGCGGCTTTCCGGGTTCTGACACCAGCGGCAGCCCAGCGAAc < 7:7820/140‑1 (MQ=255)
ttCAACGCGCGCTCAATCACTTCCGGTTCGGTCTTAGCGCACAGCTTACAGCCTTCCAGACAGAGTCTTGGGTCATACAGCAGATACTGCGTGCGGTCGCGGCTTTACTGGTTCTGACCCCAGAGGAAGCCCAGCgcaaa > 7:823197/1‑136 (MQ=255)
ttCAACGCGCGCTCAATCACTTCCGGTGCGGTCTTAGCGCACAGCTTACAGCCTTCCAGACAGAGTCGTGGGTCATAAACCAGCTCCTGAGTGCGGGCGCGGCGTTCCGGGTTGTGACACCAGCGGCCTCCCAGCGaaaa > 5:607287/1‑138 (MQ=255)
tCAACGCGCGCTCAATCACTTCCGGTGCGGTCTTAGCGCACAGCTTACAGCCTTCCAGACAGAGTCGTGGGTCATACAGCAGATACAGCGTGAGGGCGCGGCATTCAGGGTTATGAAACCAGCCGCAGCCCCGCCAACat > 5:401827/1‑139 (MQ=255)
cgcgcTCCATCCCTTCCGGTGCGGGCTTCGCGCACAGCTTACAGCCTTCCAGACAGAGTCGTGGGTCATACAGCAGATCCTGCGTGCGGGCGCGGCTTTCCGGGTGCTGACACCAGCGGCAGCCCAGCGAACAGCCTTTa < 5:669166/140‑1 (MQ=255)
cgcgcTCAATCACTTCCGGTGCGTTCTTAGCGCACAGCTTACAGCCTTCCAGACAGAGTCGTGGGTCATACAGCAGATCCTGCGTGCGGGCGCGGCTTTCCGGGTTCTGACACCAGCGGCAGCCCAGCGAACAGCCTTTa < 5:272108/140‑1 (MQ=255)
cgcgcTCAATCACTTCCGGTGCGGTCTTAGCGCACAGCTTACAGCCTTCCAGACAGAGTCGTGGGTCATACAGCAGATCCTGCGTGCGGGCGCGGCTTTCCGGGTTCTGACACCAGCGGCAGCCCAGCGAACAGGCTTTa < 7:1002715/140‑1 (MQ=255)
cgcgcTCAATCACTTCCGGTGCGGTCTTAGCGCACAGCTTACAGCCTTCCAGACAGAGTCGTGGGTCATACAGCAGATCCTGCGTGCGGGCGCGGCTTTCCGGGTTCTGACACCAGCGGCAGCCCAGCGAACAGCCtt < 3:152011/138‑1 (MQ=255)
cgcgcTCAATCACTTCCGGTGCGGTCTTAGCGCACAGCTTACAGCCTTCCAGACAGAGTCGTGGGTCATACAGCAGATCCTGCGTGCGGGCGCGGCTTTCCGGGTTCTGACACCAGCGGCAGCCCAGCGAACAGCCtt < 4:178007/138‑1 (MQ=255)
cgcgcTCAATCACTTCCGGTGCGGTCTTAGCGCACAGCTTACAGCCTTCCAGACAGAGTCGTGGGTCATACAGCAGATCCTGCGTGCGGGCGCGGCTTTCCGGGTTCTGACACCAGCGGCAGCCCAGCGAACAGCCtt < 4:760972/138‑1 (MQ=255)
cgcgcTCAATCACTTCCGGTGCGGTCTTAGCGCACAGCTTACAGCCTTCCAGACAGAGTCGTGGGTCATACAGCAGATCCTGCGTGCGGGCGCGGCTTTCCGGGTTCTGACACCAGCGGCAGCCCAGCGAACAGCCTTTa < 8:114949/140‑1 (MQ=255)
cgcgcTCAATCACTTCCGGTGCGGTCTTAGCGCACAGCTTACAGCCTTCCAGACAGAGTCGTGGGTCATACAGCAGATCCTGCGTGCGGGCGCGGCTTTCCGGGTTCTGACACCAGCGGCAGCCCAGCGAACAGCCTTTa < 7:19708/140‑1 (MQ=255)
cgcgcTCAATCACTTCCGGTGCGGGCTTAGCGCACAGCTTACAGCCTTCCAGACAGAGTCGTGGGTCATACAGCAGATCCTGCGTGCGGGCGCGGCTTTCCGGGTTCTGACACCAGCGGCAGCCCAGCGAACAGCCtt < 4:759141/138‑1 (MQ=255)
cgcgcTCAATCACTGCCGGGGCGGTCTTAGCGCACAGCTTACAGCCTTCCAGACAGAGTCGTGGGTCATACAGCAGATCCTGCGTGCGGGCGCGGCTTTCCGGGTTCTGACACCAGCGGCAGCCCAGCGAACAGCCTTTa < 6:729176/140‑1 (MQ=255)
gcgcTCAATCACTTCCGGTGCGGTCTTAGCGCACAGCTTACAGCCTTCCAGACAGAGTCGTGGGTGATACAGCAGATACTGCGTGCGGGCCCCGGGTTTCGGGTTCTGACACCAGCGGCAGCCCAGCGCACAGCCTTTaa > 6:880019/1‑140 (MQ=255)
gcgcTCAATCACTTCCGGTGCGGTCTTAGCGCACAGCTTACAGCCTTCCAGACAGAGTCGTGGGTAAAAAAGCATATACAGCGTGAGGGCGCGGCTTTCCGGGTTCTGACACCACCCGCCGCCCATCGAAAAGACCTTaa > 1:1167705/1‑140 (MQ=255)
cgcgCAATCACTTCCGGTGCGGTCTTAGCGCACAGCTTACAGCCTTCCAGACAGAGTCGTGGGTCATACAGCAGATCCTGCGTGCGGGCGCGGCTTTCCGGGTTCTGACACCAGCGGCAGCCCAGCGAACAGCCTTTAAg < 8:139803/140‑1 (MQ=255)
gcTCAATCACTTCCGGTGCGGTCTTAGCGCACAGCTTACAGCCTTCCAGACAGAGTCGTGGGGCATACCGCAGCTCCTGCCTGCGGGCGCGGCTTTCCGGGTTCTGCCACCAGCGGCAGCCCAGCGCACAGACGTTaa > 4:1136380/1‑138 (MQ=255)
aaTCACTTCCGGTGCGGTCTTAGCGCACAGCTTACAGCCTTCCAGACCTAGTCGTGGGTCATACAGCAGATCCTGCGTGCGGGCGGGTCTTTCCGGGTTCTGACACCAGCGGCAGCCCAGCGAACAGCCTTTAAGaaa < 4:902601/138‑1 (MQ=255)
aCTTCCGGTGCGGTCTTAGCGCACAGCTTACAGCCTTCCAGACAGAGTCGTGGGTCATACAGCAGATCCTGCGTGCGGGCGCGGCTTTCCGGGTTCTGACACCAGCGGCAGCCCAGCGAACAGCCTTTAAGAAATACg < 3:578258/138‑1 (MQ=255)
cTTCCGGTGCGGTCTTAGCGCACAGCTTACAGCCTTCCAGACAGAGTCGTGGGTCATACAGCAGATCCTGCGTGCGGGCGCGGCTTTCCGGGTTCTGACACCAGCGGCAGCCCAGCGAACAGCCTTTAAGAAATACGa < 4:148153/138‑1 (MQ=255)
ccGGTGCGGTCTTAGCGCACAGCTTACAGCCTTCCAGACAGAGTCGTGGGTGATACAGCAGATCCTGCGGGCGGGCGCGGCTTTGCGGGGTCTGGCACCACCGCCAGCCCCACGCACAGCCGTTAAAAAATAAGAcccag > 1:182867/1‑137 (MQ=255)
ccGGTGCGGTCTTAGCGCACAGCTTACAGCCTTCCAGACAGAGTCGTGGGTCATACAGCCGATCCATCGTGCGGGCGCGGCTTTACGGGTGCTGCCACCAGCGGCAGCCCCGCGCACCGCCGGTAAGAAAAAAGACCGTg > 2:1183117/1‑140 (MQ=255)
cGGTGCGGTCTTAGCGCACAGCTTACAGCCTTCCAGACAGAGTCGGGGGTCATACAGCAGATCCTGCGTGCGGGCGCGGCTTTCCGGGTTCTGACACCAGCGGCAGCCCAGCGAACAGCCTTTAAGAAATACGACCGTGc < 1:824993/140‑1 (MQ=255)
ggTGCGGTCTTAGCGCACAGCTTACAGCCTTCCAGACAGAGTCGTGGGTCATACAGCAGATCCAGCGTGCGGGCGCCGCTTTCCGGGGTATGACCCCAGCCGCAGCCCAGCGCACACCCGTTAAGAAATACGACCCTg > 4:1062702/1‑138 (MQ=255)
tGCGGTCTTAGCGCACAGCTTACAGCCTTCCAGACAGAGTCGTGGGTAATACAGCAGCTGCTGCGTGCGGGCGCGGCGTTCCGGGTTATGCACCCAGCGGCCGCCCCGCGAACAGCCTTTAAGAAATACGAACGTGCggc > 5:596146/1‑139 (MQ=255)
tGCGGTCTTAGCGCACAGCTTACAGCCTTCCAGACAGAGTCGTGGGGGATACAGCAGCTACTGCGTGCGGGCGCGGCTTTGCGGGTTGTGACACCACCGTCCGCCCCGCGCACACCCATTAAGAAATACGGCCGGGCggg > 2:42249/1‑139 (MQ=255)
cGGTCTTAGCGCACAGCTTACAGCCTTCCAGACAGAGTCGTGGGTCATACAGCAGATCCTGCGTGCGTGCGCGGCGTTCCGGGTTCTGACACCAGCGGCAGCCCAGAGAACAGCCGTTAGTAAATACTACCGTGCggg > 3:817678/1‑137 (MQ=255)
gTCTTAGCGCACAGCTTACAGCCTTCCAGACAGAGTCGTGGGGCATACAGCAGAGCCTGCGTGCGGGCGCGGCGTTCCGGGGTCTGACACCAGCGGCCGCCCCGCGCACCGCCGTTTAGAAATACGACCGTGCggcttcc > 6:327381/1‑135 (MQ=255)
ttAGCGCACAGCTTACAGCCTTCCAGACAGAGTCGTGGGGCATACACCAGATCCTGCGTGCGGGCGCGGCTTTCCAGGTTCTGCCACCCGCGGCAGCCCAGCGAACAGCCGTTTAGAAATACGAACGGGCGGAGACCcgg > 2:732189/1‑140 (MQ=255)
tAGCGCACAGCTTACCGCCTTCCAGACAGAGTCGTGGGTCATACAGCAGATCCTGCGTGCGGGCGCGGCTTTCCGGGTTCTGACACCAGCGGCAGCCCAGCGAACAGCCTTTAAGAAATACGACCGTGCGGATACCgggg < 6:62621/140‑1 (MQ=255)
tAGCGCACAGCTTACAGCCTTCCAGACAGAGTCGTGGGTCATACAGCAGATCCTGCGTGCGGGCGCGGCTTTCCGGGTTCTGACACCAGCGGCAGCCCAGCGAACAGCCTTTAAGAAATACGACCGTGCGGATACCgg < 4:482539/138‑1 (MQ=255)
tAGCGCACAGCTTAAAGCCTTCCACACAGAGTCGTGGGTCATACAGCAGATCCTGCGTGCGGGCGCGGCTTTCCGGGTTCTGACACCAGCGGCAGCCCAGCGAACAGCCTTTAAGAAATACGACCGTGCGGATACCgggg < 1:754182/140‑1 (MQ=255)
tAGCGAACTGCTTACCGCCTTCCAGACAGAGTGGGGGGTCATACTGCCGTTCCTGCGGGCGGGCGCGGCGTGCCGGGTTCTGACACCAGCGGCTGCCCAGCGCACAGCCTTTAAGAAATACGACCGTGCGGATACCgggg < 7:165793/140‑1 (MQ=255)
aatcgcACAGCTTACAGCCTTCCAGACAGAGTCGTGGGTCATACAGCAGTTCCTGCGTGCGGGCGCGGCTTTCCGGGTTCTGACACCAGCGGCAGCCCAGCGAACAGCCTTTAAGAAATACGACCGTGCGGATACCgggg < 1:1087996/137‑1 (MQ=255)
cgcACAGCTTACAGCCTTCCAGACAGAGTCGTGGGTCATACAGCAGATCCTGCGTGCGGGCGCGGCTTTCCGGGTGCTGACACCAGCGGCAGCCCAGCTAACAGCATTTAAGAAATACGACCGTGCGGATACCGGGGCca < 1:815541/140‑1 (MQ=255)
caGCTTACAGCCTTCCAGACAGAGTCGTGGGTCATACAGCAGATCCTGCGTGCGGGCGCGGCTTTCCGGGGTCTGACACCAGCGGCAGCCCAGCGAACAGCCTTTAAGAAATAAGCCCGTGCGGCTACCGGGGGcatcag > 2:893495/1‑139 (MQ=255)
caGCTTACAGCCTTCCAGACAGAGTCGTGGGGCATACAGCAGATCCTGCGTGCGGGCGCGGCGTTCCGGGGTCTGCCCCCCGCGGCAGCCCCCCGCACAGCCTATAACAAATACGACCGTGCGGATTCCCGGGCcaagat > 2:547856/1‑136 (MQ=255)
gCTTACAGCCTTCCAGACAGAGTCGTGGGTCATACAGCCGATCCGGCGTGCGGGCGCGGCGTTCCGGGGTGTGACCCCAGCGGCCGCCCAGCGCACAGCCGTTAATAAATCAGCCCGGGCGGCGACCGGGGCCATCATgg > 8:609669/1‑140 (MQ=255)
gCTTACAGCCTTCCAGACAGAGTCGTGGGTCATACAGCAGATCCAGCGTGCGGGCCCGGGTTTCCGGGTTCTGTCACCCGCGGGAGCCCCGCGAACAGCCGGTTAGAATAACGACCGTGCGGCTACCGGGGCcctcat > 4:1015851/1‑138 (MQ=255)
gCTTACAGCCTTCCAGACAGAGTCGTGGGTCATAAAACAGATACATAGTGGGGGCGCGGCTTTTCGGGTTAGTACACCAGACGCACCCACCCCCACACCCGTTAAGAAATAACCCCCATCCGATACCCGGGCcatgaatg > 8:1020886/1‑135 (MQ=255)
cTTACAGCCTTCAAGACTGAGACGTTGGTCATACAGCAGATCCTGCGTGCGGGCGCGGCTTTCCGGGTTCTTACACCAGCGGCAGCCCAGCGAACAGCCTTTAAGAAATACGACCGTGCGGATACCGGGGCCATCATg < 4:872156/138‑1 (MQ=255)
ttACAGCCTTCCAGACAGAGTCGTGGGGAAAACACCCGAAAAAACGTGCCGGCCCGGCGTTAACCGTGTTGTCACCAGCGCCCGCCCAGCGAACAGCCGATAATAAATAAAACCCTGCGCATTACCCGCCCATCATgg > 4:1161907/1‑138 (MQ=255)
tACAGCCTTCCATACAGAGTCGTGGGGCATACAGCAGATCCTGCGGGCGGGCGCGGCTTTCCGGGTTCTGACACCCGCGGCAGCCCAGCGAACAGCCTTTAAGCAATACGACCGGGCGGATACAGGGGCCATCATGGGTc < 6:618621/140‑1 (MQ=255)
cgCCTTCCAGACAGAGTCGTGGGTCATAAAGCAGCTCCTGCGTGAGGGCGCGGCTTTCCGGGTTCTGACACCAGCGGCAGCCCAGCGAACTGCCTTTAAGAAATACGACCGTGCGGATACCGGGGCCATCATGGGTCGAg < 7:715842/139‑1 (MQ=255)
cgCCTTCAACACAGAGGCGTGGGTCATACAGCAGATCCTGCGTGCGGGCGCGGCTTTCCGGGTTCTGACACCAGCGGCAGCCCAGCGAACAGCCTTTAAGAAATACGACCGTGCGGATACCGGGGCCATCATGGGTCg < 4:130576/137‑1 (MQ=255)
cagcTTCCAGACAGAGTCGTGGGTCATACAGCAGATCCTGCGTGCGGGCGCGGCTTTCCGGGTTCTGACACCAGCGGCAGCCCAGCGAACAGCCTTTAAGAAATACGACCGTGCGGATACCGGGGCCATCATGGGTCGAg < 7:298562/137‑1 (MQ=255)
aGCCTTCCAGTCAGAGGCGTGGGTCATACAGCAGATCCTGCGTGCGGGCGCGGCTTTCCGGGGTCTGACACCAGCGGCAGCCCAGCGAACTGCCTTTAAGAAATACGACCGTGCGGATACCGGGGCCATCATGGGTCGAg < 7:873142/140‑1 (MQ=255)
ccTTCCAGACAGAGTCGTGGGTCATACAGCAGATCCTGCGTGCGGGCGCGGGTTTCCGGGTTCTGACACCCGCGGCTGGCCAGCGAACAGCCTTTAAGTAATACGACCGTGCGGATACCGGGGCCATCATGGGTCGAGTa < 5:1076318/140‑1 (MQ=255)
tCCAGACAGCGTCGTGGGTCATACAGCAGATCCTGCGTGCGGGCGCGGGTGTCCCGGTTCTGACCCCCGCGGCCGCCCCGCGAACAGCCATTAAGAAATAAGCACCTGCGGAAACCGCGGCCATCCTGGGTCGACTACCg > 8:355155/1‑140 (MQ=255)
tCCAGACAGAGTCGTGGGTCATACAGCAGATCCTGCGTGCGGGCGCGGCTTTCCGGGTTCTGACACCAGCGGCAGCCCAGCGAACAGCCTTTAAGAAATACGACCGTGCGGATACCGGGGCCATCATGGGTCGAGTAg < 3:857638/138‑1 (MQ=255)
tCCAGACAGAGTCGTGGGGGATACAGCAGATCCTGCGTGCGGGCGCGGCGGTCCGGGTTCTGACACCCGCGGCAGCCCAGCCAACAGCCGTTAATAAATACGACCGTGCGGATACCCGGGCCATCATGGGTCGAGTAGCg > 8:733260/1‑140 (MQ=255)
tCCAGACAGAGTCGTGGGGGATAACGCAGATCCTGCGGTCGGGCGCGGCGTTGCGGGTTATGGCACCCGCGGCCGCCCCGCGAACAGCCTTTAAGAAATAAGACCGGTGGGATACTGGGGCCATCCTGGGTGGAggtggg > 6:189272/1‑135 (MQ=255)
tCCAGACAGAGTCGTGGGGCATACAGCAGATCCTGCGTGCGGGCGCGGCTTTCCGGGTTCTGACACCAGCGGCAGCCCAGCTAACAGCCTTTAAGAAATACGACCGTGCGGATACCGGGGCCATCATGGGTCGAGTAGCg < 2:953038/140‑1 (MQ=255)
tCCAGACAGAGTCGTGGGGCATACAGCAGATACTTCGTGCGGGCGCGGCTTTACGGGTTCTGACACCACCGGCAGCCCAGCGCACACCCGTTAAGAAAAACCCCCGGGCGGCTACCGGGGCCCTCATGGGGCGAGTAGCg > 7:710418/1‑140 (MQ=255)
gccAGACAGAGTCGTGGGGCATACAGCAGATCCTGCGTGCGGGCGCGGCTTTCCGGGTTCTGACACCAGCGGCAGCCCAGCGAACAGCCTTTAAGAAATACGACCGTGCGGATACCGGGGCCATCATGGGTCGAGTAGCg < 2:287421/139‑1 (MQ=255)
cagacagaGTCGTGGGTGATACAGCAGATACTGCGTGCGGGCGCGGCTTTCCGGGTTCTGACACCAGCGGCAGCCCCCCCAACAGCCATTAAGAAATAAGAACGGGCGGCTACCGGGGCCCTCATTGGTCGAGTAGcc > 4:1002934/1‑137 (MQ=255)
agagGCGTGGGTCATACAGCCGATCCTGCGGGCGGGCGCGGCTTTCCGGGTTCTGACACCAGCGGCAGCCCAGCGAACAGCCTTTAAGAAATACGACCGTGCGGATACCGGGGCCATCATGGGTCGAGTAGCGGTGAata < 7:961897/140‑1 (MQ=255)
agTCGTGGGTGATACAGCAGAACCTGCGTGCGGGCGCGGCTTTCCGGGGTAAGACACCAGCGGCAGCCCAGCGAAACGCAATTAACAAATACCCCAGTGAGGATACCGGGGCCCTCATTGGTCGGTTAGGGTTGAATAtt > 6:788124/1‑140 (MQ=255)
agTCGTGGGTCATACAGCCGATCCTGCGTCCCGGCGCGGCTGTCCCGGTTCTGACACCAGAGGCAGCCCAGCGAACAGCCATTAAGAAATAAGCCCGTGCGCATACCCGGGCCATCAACGATAGATGAGCGTTCAATAtt > 2:683622/1‑140 (MQ=255)
agTCGTGGGTCATACAGCAGATCCTGCGTGCGGGCGCGGCTTTGCGGGTTCTGACACCAGCGGCAGCCCAGCGAACAGCCTTTAAGAAATACGACCGTGCGGATACCGGGGCCATCATGGGTCGAGTAGCGTTGAATAtt > 6:512087/1‑140 (MQ=255)
agTCGTGGGTCATACAGCAGATCCTGCGTGCGGGCGCGGCGTTGCGGGTTGTGACACCAGCGGCCGCCCAGCGCACAGCCGTTAATAAATACGCCCGGGCGGATACCGGGGGCATCATGGGTCGAGTAGCGTTGAatgtg > 8:298562/1‑137 (MQ=255)
agTCGTGGGTCATACAGCAGATCCTGCGTGCGGGCGCCGCTTTCCGGGTTCTGACACCAGCGGCCGCCCCGCGAACCGCCGTTAAGAAATAAGACCGTGCGGAGACCGGGGGCATCATGGGTCGAGTAGCGTTGAATAtt > 2:419813/1‑140 (MQ=255)
agTCGTGGGTCATACAGCAGATACTGCGTGCGGGGGCGGCTTTCCGGGTTGTGACACCCGCGGCAGCCCACCGCACACCCTTTAAGAAATACGACCGGGCGGATACCGGGGCCATGATGGGGCGAGGAGCGGTGAataat > 2:1135132/1‑138 (MQ=255)
tCGTGGGGGATACAGCAGATCCTGCGTGCGGGCGCGGCGTTCCGGGGTGTGACCCCCGCGGCCGCCCCGCGCACCGCCGGTTAGAAATACCCCCGTGCGGCTACCCGGGGCCGCATGGGGCGGGTAGCGTGGAATAtt > 4:192753/1‑138 (MQ=255)
tGGGGCATAAAGCCGCTCCAGCGTGCGGGCGCGGCTTTCCGGGGTCTGACCCCAGCGGCCGCCCACCGAACACCCTTTAAGAAATACGACCCTGCGGCTACCGGGGCCCTCATGGGGGGAGTAGCGTTGAATATTTaaaa > 8:199578/1‑140 (MQ=255)
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CGGGCAGCAGTCGGTTAGCGCCGTAAAATGCTCCGGGGTTAACTTTTCCCGATGAATAAGCAAACCATTCAACGCGCGCTCAATCACTTCCGGTGCGGTCTTAGCGCACAGCTTACAGCCTTCCAGACAGAGTCGTGGGTCATACAGCAGATCCTGCGTGCGGGCGCGGCTTTCCGGGTTCTGACACCAGCGGCAGCCCAGCGAACAGCCTTTAAGAAATACGACCGTGCGGATACCGGGGCCATCATGGGTCGAGTAGCGTTGAATATTGAAAA > NZ_CP022686/4368202‑4368476
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| Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
N/A
