Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A7 F13 I0 R1
|
230 |
5035.0 |
9125430 |
98.4% |
8979423 |
135.8 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
freq |
annotation |
gene |
description |
| RA |
NZ_CP022686 |
4,368,341 |
T→G |
13.1% |
D47A (GAC→GCC) |
ybiY ← |
glycyl‑radical enzyme activating protein |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NZ_CP022686 | 4,368,341 | 0 | T | G | 13.1%
| 151.4
/ 4.2
| 107 | D47A (GAC→GCC) | ybiY | glycyl‑radical enzyme activating protein |
| Reads supporting (aligned to +/- strand): ref base T (40/50); new base G (14/3); total (54/53) |
| Fisher's exact test for biased strand distribution p-value = 6.83e-03 |
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 |
Only 100 of 108 total aligned reads displayed.
GGCAGCAGTCGGTTAGCGCCGTAAAATGCTCCGGGGTTAACTTTTCCCGATGAATAAGCAAACCATTCAACGCGCGCTCAATCACTTCCGGTGCGGTCTTAGCGCACAGCTTACAGCCTTCCAGACAGAGTCGTGGGTCATACAGCAGATCCTGCGTGCGGGCGCGGCTTTCC‑GGGTTCTGACACCAGCGGCAGCCCAGCGAACAGCC‑TTTAAGAAATACGACCGTGCGGA‑TACCGGGGCCATCATGGGTCGAGTAGCGTTGAATATTGAAAATCAT > NZ_CP022686/4368204‑4368480
|
ggCAGCAGTCGGTTAGCGCCGTAAAATGCTCCGGGGTTAACTTTTCCCGATGAATAAGCAAACCATTCAACGCGCGCTCAATCACTTCCGGTGCGGTCTTAGCGCACAGCTTACAGCCTTCCAGACAGAGTCGTGGGTcc > 4:673162/1‑139 (MQ=255)
ggCAGCAGTCGGTTAGCGCCGTAAAATGCTCCGGGGTTAACTTTTCCCGATGAATAAGCAAACCATTCAACGCGCGCTCAATCACTTCCGGTGCGGTCTTAGCGCACAGCTTACAGCCTTCCAGACAGAGTCGTGGGTCa > 1:809998/1‑140 (MQ=255)
ggCAGCAGTCGGTTAGCGCCGTAAAATGCTCCGGGGTTAACTTTTCCCGATGAATAAGCAAACCATTCAACGCGCGCTCAATCACTTCCGGTGCGGTCTTAGCGCACAGCTTACAGCCTTCCAGACAGAGTCGTGGGGCa > 3:939048/1‑140 (MQ=255)
ggCAGCAGTCGGTTAGCGCCGTAAAATGCTCCGGGGTTAACTTTTCCCGATGAATAAGCAAACCATTCAACGCGCGCTCAATCACTTCCGGTGCGGTCTAAGCGCACAGCTTACAGCCTTCCAGACAGAGTCGTGGGGCa > 5:831955/1‑140 (MQ=255)
ggCAGCAGTCGGGTAGCGCCGTAAAATGCTCCGGGGTTAACTTTTCCCGATGAATAAGCAAACCATTCAACGCGCGCTCAATCACTTCCGGTGCGGTCTTAGCGCACAGCTTACAGCCTTCCAGACAGAGTCGTGGGTCa < 2:1153673/140‑1 (MQ=255)
ggCAGCAGGAGGTTAGCGCCGTAAAATGCTCCGGGGGTAACTTTTCCCGATGAATAAGCAAACCATTCAACGCGCGCTCAATCACTTCCGGTGCGGTCTTAGCGCACAGCTTACAGCCTTCCAGACAGAGTCGTGGGTCa < 6:161497/140‑1 (MQ=255)
tcagcatTCGGTTAGCGCCGTAAAATTCTCCGTGGTTAACTTTTCCATATTAATAATCAAACCATTCAACGAGCGCTCTATCACTTCCTGGGCGGTCTTAGCGCACAGATTACAGCCTTCCAGACAGAGTCGTGGGTCAt < 6:806333/139‑1 (MQ=255)
gcagcaGTCGGTTAGCGCCGTAAAATGCTACGGGGTTAACTTTTCCCGATGAATAAGCAAACCATTCAACGCGCGCTCAATCACTTCCGGTGCGGTCTTAGCGCACAGCTTACAGCCTTCCAGACAGAGTCGTGGGTCAt < 6:773491/140‑1 (MQ=255)
gcagcaGTCGCTTAGCGCCGGAAAATGCTCCGGGGTTAACTTATCCCGATGAATAAGCAAACCATTCAACGCGCGCTCAATCACTTCCGGTGCGGTCTTAGCGCACAGCTTACAGCCTTCCAGACAGAGTCGTGGGTCAt < 1:952261/140‑1 (MQ=255)
agcagTCGGTTAGCGCCGTAAAATGCTCCGGGGTTAACTTTTCCCGATGAATAAGCAAACCATTCAACGCGCGCTCAATCACTTCCGGTGCGGTCTTAGCGCACAGCTTACAGCCTTCCAGACAGAGTCGTGGGTCATAc < 1:1184951/140‑1 (MQ=255)
agcagTCGGTTAGCGCCGTAAAATGCTCCGGGGTTAACTTTTCCCGATGAATAAGCAAACCATTCAACGCGCGCTCAATCACTTCCGGTGCGGTCTTAGCGCACAGCTTACAGCCTTCCAGACAGAGTCGTGGGTCATAc < 5:220192/140‑1 (MQ=255)
gcagTCGGTTAGCGCCGTAAAATGCTCCGGGGTTAACTTTTCCCGATGAATAAGCAAACCATTCAACGCGCGCTCAATCACTTCCGGTGCGGTCTTAGCGCACAGCTTACAGCCTTCCAGACAGCGTCGTGGGTCAtt > 7:802731/1‑137 (MQ=255)
gcagTCGGTTAGCGCCGTAAAATGCTCCGGGGTTAACTTTTCCCGATGAATAAGCAAACCATTCAACGCGCGCTCAATCACTTCCGGTGCGGTCTTAGCGCACAGCTTACAGCCTTCCAGACAGAGTCGTGGGTCATa > 7:44/1‑138 (MQ=255)
cagTCGGTTAGCGCCGTAAAATGCTCCGGGGTTAACTTTTCCCGATGAATAAGCAAACCATTCAACGCGCGCTCAATCACTTCCGGTGCGGTCTTAGCGCACAGCTTACAGCCTTCCAGACAGAGTCGTGGGTGATaacg > 6:754297/1‑137 (MQ=255)
cagTCGGTTAGCGCCGTAAAATGCTCCGGGGTTAACTTTTCCCGATGAATAAGCAAACCATTCAACGCGCGCTCAATCACTTCCGGTGCGGTCTTAGCGCACAGCTTACAGCCTTCCAGACAGAGTCGTGGGGCCTAcac > 4:779569/1‑139 (MQ=255)
agTCGGTTAGCGCCGTAAAATGCTCCGGGGTTAACTTTTCCCGATGAATAAGCAAACCATTCAACGCGCGCTCAATCACTTCCGGTGCGGTCTTAGCGCACAGCTTACAGCCTTCCAGACAGAGTCGTGGGTCATAcagc > 5:811050/1‑140 (MQ=255)
gTCGGTTAGCGCCGTAAAATGCTCCGGGGTTAACTTTTCCCGATGAATAAGCAAACCATTCAACGCGCGCTCAATCACTTCCGGTGCGGTCTTAGCGCACAGCTTACAGCCTTCCAGACAGAGTCGTGGGTCATAcagca < 6:548005/140‑1 (MQ=255)
cGGTTAGCGCCGTATAATGCTACGGGGGTAACTTTTCCCGATGAATAAGCAAACCATTCAACGCGCGCTCAATCACTTCCGGTGCGGTCTTAGCGCACAGCTTACAGCCTTCCAGACAGAGTCGTGGGTCATAcagca < 8:483710/138‑1 (MQ=255)
ggTTAGCGCCGTAAAATGCTCCGGGGTTAACTTTTCCCGATGAATAAGCAAACCATTCAACGCGCGCTCAATCACTTCCGGTGCGGTCTTAGCGCACAGCTTACAGCCTTCCAGACAGAGTCGTGGGTCAAAcagcagct > 1:574188/1‑138 (MQ=255)
tAGCGCCGTAAAATGCTCCGGGGTTAACTTTTCCCGATGAATAAGCAAAACATTCAACGCGCGCTCAATCACTTCCGGTGCTGTCTTATCGAACAGCTTACAGCCTTCCAGACAGAGTCGAGGGTCAAACACCAGaaa > 7:576267/1‑136 (MQ=255)
aGCGCCGTAAAATGCTCCGGGGTTAACTTTTCCCGATGAATAAGCAAACCATTCAACGCGCGCTCAATCACTTCCGGTGCGGTCTTAGCGCACAGCTTACAGCCTTCCAGACAGAGTCGTGGGTCATACAGCAGAtac > 7:110314/1‑136 (MQ=255)
gcgcCGTAAAATGCTCCGGGGTTAACTTTTCCCGATGAATAAGCAAACCATTCAACGCGCGCTCAATCACTTCCGGTGCGGTCTTAGCGCACAGCTTACAGCCTTCCAGACAGAGTCGTGGGTCATACCTCAGAtacagc > 3:794645/1‑135 (MQ=255)
ccGTAAAATGCTCCGGGGTTAACTTTTCCCGATGAATAAGCAAACCATTCAACGCGCGCTCAATCACTTCCGGTGCGGTCTTAGCGCACAGCTTACAGCCTTCCAGACAGAGTCGTGGGTGCTACAGCAGATCCtgcgtg > 1:974741/1‑140 (MQ=255)
aaaaTGCTCCGGGGTTAACTTTTCCCGATGAATAAGCAAACCATTCAACGCGCGCTCAATCACTTCCGGTGCGGTCTTAGCGCACAGCTTACAGCCTTCCAGACAGAGTCGTGGGTCATACCGCAGATCCggcgtgcg > 8:190846/1‑138 (MQ=255)
aaTGCTCCGGGGTTAACTTTTCCCGATGAATAAGCAAACCATTCAACGCGCGCTCAATCACTTCCGGTGCGGTCTTAGCGCACAGCTTACAGCCTTCCAGACAGAGTCGTGGGTCATACAGCAGATCCTGCGTGCGGgcg < 1:591837/140‑1 (MQ=255)
aTGCTCCGGGGTTAACTTTTCCCGATGAATAAGCAAACCATTCAACGCGCGCTCAATCACTTCCGGTGCGGTCTTAGCGCACAGCTTACAGCCTTCCAGACAGAGTCGTGGGTCATACAGCAGATCCTGCGTGCGGgc < 8:807249/138‑1 (MQ=255)
tGCTCCGGGGGTAACTTTTCCCGATGAATAAGCAACCCATTCAACGCGCGCGCAATCACTTCCGGTGCGGTCTTAGCGCACAGCTTACAGCCTTCCAGACAGAGTCGTGGGTCATACAGCAGATCCTGCGTGCGGGcgcg < 6:303650/140‑1 (MQ=255)
tCCGGGGTTAACTTTTCCCGATGAATAAGCAAACCATTCAACGCGCGCTCAATCACTTCCGGTGCGGTCTTAGCGCACAGCTTACAGCCTTCCAGACAGAGTCGTGGGTGAAACAGCAGCTCCAGCGTGAGGGCGCGGCt > 4:884684/1‑140 (MQ=255)
cGGGGTTAACTTTTCCCGATGAATAAGCAAACCATTCAACGCGCGCTCAATCACTTCCGGTGCGGTATTAGCGCACAGCTTACAGCCTTCCAGACAGAGTCGTGGGTCCATCCGCAGATACACCGTGAGGGCGCGGCatt > 5:698907/1‑140 (MQ=255)
cTTTTCCCGATGAATAAGCAAACCATTCAACGCGCGCTCAATCACTTCCGGGGCGGTCTTAGCGCACAGCTTACAGCCTTCCAGACAGAGGCGTGGGTCATACAGCAGATCCTGCGTGCGGGCGCGGCTTTCC‑GGGTTCt < 5:16896/140‑1 (MQ=255)
ttCCCGATGAATAAGCAAACCATTCAACGCGCGCTCAATCACTTCCGGTGCGGTCTTAGCGCACAGCTTACAGCCTTCCAGACAGAGTCGTGGGTCATACAGCAGATCCAGCGTGCGGGCGCGGCTTTAC‑ggggtgtgcc > 6:166792/1‑133 (MQ=255)
ccGATGAATAAGCAAACCATTCAACGCGCGCTCAATCACTTCCGGTGCGGTCTTAGCGCACAGCTTACAGCCTTCCAGACAGAGTCGTGGGTCATACAGCAGATCCTGCGTGCGGGCGCGGCTTTCC‑GGGTTCTGACAcc < 6:177035/140‑1 (MQ=255)
aTAAGCAAACCATTCAACGCGCGCTCAATCACTTCCGGTGCGGTCTTAGCGCACAGCTTACAGCCTTCCAGACAGAGTCGTGGGTCATACAGCAGATCCTGCGTGCGGGCGCGGCTTTCC‑GGGTTCTGACACCAGCGGCa < 3:884684/140‑1 (MQ=255)
ccAAACCATTCAACGCGCGCTCAATCACTTCCGGTGCGGTCTTAGCGCACAGCTTACAGCCTTCCAGACAGAGTCGTGGGTCATACAGCAGATCCTGCGTGCGGGCGCGGCTTTCC‑GGGTTCTGACACCAGCGGCAGc < 7:234768/137‑1 (MQ=255)
aaCCATTCAACGCGCGCTCAATCACTTCCGGTGCGGTCTTAGCGCACAGCTTACAGCCTTCCAGACAGAGTCGTGGGTGAAAAAGCAGCTACTGCGTGCGGGGGCGGCTTTGC‑GGGGTTTGTCACCCGCGGCAGCCCCGc > 5:33796/1‑140 (MQ=255)
cATTCAACGCGCGCTCAATCACTTCCGGTGCGGTCTTAGCGCACAGCTTACAGCCTTCCAGACAGAGTCGTGGGTCATACAGCAGATCCTGCGTGCGGGCGCGGCTTTCC‑GGGTTCTGACACCAGCGGCAGCCCAGCg < 8:8114/138‑1 (MQ=255)
cATTCAACGCGCGCTCAATCACTTCCGGTGCGGTCTTAGCGCACAGCTTACAGCCTTCCAGACAGAGTCGTGGGTCATACAGCAGATCCTGCGTGCGGGCGCGGCTTTCC‑GGGTTCTGACACCAGCGGCAGCCCAGCGaa < 6:205556/140‑1 (MQ=255)
cATTCAACGCGCGCTCAATCACTTCCGGTGCGGGCTTAGCGCACAGCTTACAGCCTTCCAGACAGAGTCGTGGGTCATACAGCAGATCCTGCGTGCGGGCGCGGCTTTCC‑GGGTTCTGACACCAGCGGCAGCCCAGCGaa < 6:545652/140‑1 (MQ=255)
cATTCAACGCGCGCTCAAGCACTGCCGGTGCGGGCTTAGCGCACAGCTTACAGCCTTCCAGACAGAGTCGTGGGTCATACAGCAGATCCTGCGTGCGGGCGCGGCTTTCC‑GGGTGCTGACACCAGCGGCAGCCCAGCg < 8:623734/138‑1 (MQ=255)
cATTCAACGCGCGCGCAATCACTTCCGGGGCGGTCTTAGCGCACAGCTTACAGCCTTCCAGACAGAGGCGTGGGTCATACAGCAGATCCTGCGTGCGGGCGCGGCTTTCC‑GGGTTCTGACACCAGCGGCAGCCCAGCg < 7:167544/138‑1 (MQ=255)
cATTCAACGCGCGATCAATCACTTCCGGTGCGGTCTTAGCGCACAGCTTACAGCCTTCCAGACAGAGTCGTGGGTCATACAGCAGATCCTGCGTGCGGGCGCGGCTTTCC‑GGGTTCTGACACCAGCGGCAGCCCAGCGaa < 1:245741/140‑1 (MQ=255)
aTTCAACGCGCGCTCAATCACTTCCGGTGCGGTCTTAGCGCAGAGCTTACAGCCTTCCAGACAGAGTCGTGGGTCATACAGCAGATCCTGCGTGCGGGCGCGGCTTTCC‑GGGTTCTGACACCAGCGGCAGCCCAGCGAAc < 3:148947/140‑1 (MQ=255)
aTTCAACGCGCGCTCAATCACTTCCGGTGCGGTCTTAGCGCACAGCTTACAGCCTTCCAGACAGAGTCGTGGGTCATACAGCAGATCCTGCGTGCGGGCGCGGCTTTCC‑GGGTTCTGACACCAGCGGCAGCCCAGCGAAc < 5:204680/140‑1 (MQ=255)
ttCAACGCGCGCTCAATCACTTCCGGTGCGGTCTTAGCGCACAGCTTACAGCCTTCCAGACAGAGTCGTGGGTCAAACAACAGAAGCAGCGGTGGGGCGCCGGGTTCA‑GGGTGCGGACACCCTCGGCCCACCAGCggaac > 5:34756/1‑136 (MQ=255)
ttCAACGCGCGCTCAATCACTTCCGGTGCGGTCTTAGCGCACAGCTTACAGCCTTCCAGACAGAGTCGTGGGTCAAAAAAAAGAACCTGCGTGCCGGCGACGCGTTCC‑CCGTTCTGACACCAACGGCCCCCCACCGaaac > 3:688728/1‑138 (MQ=255)
aCGCGCGCTCAATCACTTCCGGTGCGGTCTTAGCGCACAGCTTACAGCCTTCCAGACAGAGTCGTGGGTGATACAGCAGATCCTGCGTGCGGGCGCGGCTTTCC‑GGGGTATGCCACCACCGGCCGCCCAGCGCACAGc > 8:3115/1‑138 (MQ=255)
aCGCGCGCTCAATCACTTCCGGTGCGGTCTTAGCGCACAGCTTACAGCCTTCCAGACAGAGTCGTGGGTGATACAGCAGATCCTGCGTGCGGGCGCGGCGTTGC‑GGGGTCTGACCCCACCGGCAGCCCACCCAACAGcca > 3:207491/1‑139 (MQ=255)
cgcgcTCAATCACTTCCGGTGCGGTCTTAGCGGACAGCTTACAGACTTCCAGAAAGTGTCGTGTGTCATACAGCAGATTCTGCGTGCGGGCGCGGCTTTCC‑GGGTTCTGACATCAGCGGCAGCCCAGCGAACAGCC‑tt < 7:940998/138‑1 (MQ=255)
cgcgcTCAATCACTTCCGGTGCGGTCTTAGCGCACAGCTTCCAGCCTTCCAGACCGAGTCGTGGGTCATACAGCAGATCCTGCGTGCGGGCGCGGCTTTCC‑GGGTTCTGACACCAGCGGCAGCCCAGCGAACAGCC‑tt < 8:746487/138‑1 (MQ=255)
cgcgcTCAATCACTTCCGGTGCGGTCTTAGCGCACAGCTTACAGCCTTCCAGACAGAGTCGTGGGTCATACAGCAGATCCTGCGTGCGGGCGCGGCTTTCC‑GGGTTCTGACACCAGCGGCAGCCCAGCGAACAGCC‑tt < 8:749861/138‑1 (MQ=255)
cgcgcTCAATCACTTCCGGTGCGGTCTTAGCGCACAGCTTACAGCCTTCCAGACAGAGTCGTGGGTCATACAGCAGATCCTGCGTGCGGGCGCGGCTTTCC‑GGGTTCTGACACCAGCGGCAGCCCAGCGAACAGCC‑TTTa < 5:1111178/140‑1 (MQ=255)
cgcgcTCAATCACTTCCGGTGCGGTCTTAGCGCACAGCTTACAGCCTTCCAGACAGAGTCGTGGGTCATACAGCAGATCCTGCGTGCGGGCGCGGCTTTCC‑GGGTTCTGACACCAGCGGCAGCCCAGCGAACAGCC‑TTTa < 6:391275/140‑1 (MQ=255)
cgcgcTCAATCACTTCCGGTGCGGTCTTAGCGCACAGCTTACAGCCTTCCAGACAGAGTCGTGGGTCATACAGCAGATCCTGCGTGCGGGCGCGGCTTTCC‑GGGTTCTGACACCAGCGGCAGCCCAGCGAACAGCC‑TTTa < 4:561697/140‑1 (MQ=255)
cgcgcTCAATCACTTCCGGGGCGGTCTTAGCGCACAGCTTACAGCCTTCCAGACAGAGTCGTGGGTCATACAGCAGATCCTGCGTGCGGGCGCGGCTTTCC‑GGGTTCTGACACCAGCGGCAGCCCAGCGAACAGCC‑TTTa < 4:683481/140‑1 (MQ=255)
cgagcTCAATCACTTCCGGTGCGGTCTTAGCGCACAGCTTACAGCCTTCCAGACAGAGTCGTGGGGCATACAGCAGATCCTGCGTGCGGGCGCGGCTTTCC‑GGGTTCTGACACCAGCGGCAGCCCAGCGAACAGCC‑TTTa < 5:602813/137‑1 (MQ=255)
gcgcTCAATCACTTCCGGTGCGGTCTTAGCGCACAGCTTACAGCCTTCCAGACAGAGTCGTGGGTCATACAGCAGAACCTTCGTGCGGGCGCGGCTTTCC‑GGGTTATGACACCACCGGCAGCCCCCCGCACAGCC‑TTTaa > 3:376225/1‑140 (MQ=255)
cgcTAAATCACTTCCGGGTCGGTCTTAGCGCACAGCTTACAGCCTTCCAGACAGAGGCGTGGGTCATACAGCAGATCCTGCGTGCGGGCGCGGCTTTCC‑GGGTTCTGACACCAGCGGCAGCCCAGCGAACAGCC‑TTTa < 7:1086646/138‑1 (MQ=255)
gcTCAATCACTTCCGGTGCGGTCTTAGCGCACAGCTTACAGCCTTCCAGACAGAGTCGTGGGGGATACAGCAGATGCAGCGTGCGGGCGCGGCGTTAC‑GGGTTCTGGCCCCAGCGGCCGCCCCGCGCAAAGCC‑GTTaa > 8:555018/1‑138 (MQ=255)
tCAATCACTTCCGGTGCGGTCTTAGCGCACAGCTTACAGCCTTCCAGACAGAGTCGTGGGTCATACAGCAGATCCTGCGTGCGGGCGCGGCTTTCC‑GGGTTCTGACACCAGCGGCAGCCCAGCGAACAGCC‑TTTAAGaaa < 4:28629/140‑1 (MQ=255)
cAATCACTTCCGGTGCGGTCTTAGCGCACAGCTTACAGCCTTCCAGACAGAGTCGTGGGGCATACAACACATCCAGCGTGCGGGCGCGGCTTTCC‑GGGTTCTGACACCCCCGGCAGCCCCGCGCACAGCC‑GTTAAGaa > 8:872678/1‑138 (MQ=255)
aCTTCCGGTGCGGTCTTAGCGCACAGCTTACAGCCTTCCAGACAGAGTCGTGGGTCATACAGCAGATCCTGCGTGCGGGCGCGGCTTTCC‑GGGTTCTGACACCAGCGGCAGCCCAGCGAACAGCC‑TTTAAGAAATACGAc < 4:349665/140‑1 (MQ=255)
ttCCGGTGCGGTCTTAGCGCACAGCTTACAGCCTTCCAGACAGAGTCGTGGGTCATAc > 2:1127625/1‑58 (MQ=255)
ttCCGGTGCGGTCTTAGCGCACAGCTTACAGCCTTCCAGACAGAGTCGTGGGTCATAc < 1:1127625/58‑1 (MQ=255)
ccGGTGCGGTCTTAGCGCACAGCTTACAGCCTTCCAGACAGAGTCGTGGGTCAGACAGCAGATCCTGCGTGCGGGCGCGGCGTTCC‑GGGTTCTGACACCAGCGGGAGCCCACCGATCAGCC‑TTTAAGAAAAACGCCCg > 8:1012471/1‑138 (MQ=255)
cGGTCTTAGCGCACCGCTTACAGCCTTCCAGACAGAGTCGTGGGTCAGACCGCAGCTCCAGCGTGCGGGCGCGGCTTTCC‑GGGTTCTGACCCACCCGGCAGCCCCCCGAACCGCC‑GTTAAGAAATAAGACCGTGCggg > 8:442345/1‑137 (MQ=255)
gTCTTAGCGCACAGCTTACAGCCTTCCAGACAGAGTCGTGGGTGATAAACCAGAACATGCGTGCGGGCGCGGCGTTAC‑GGGTTGTGCCACCACCCGCAGCCCACCCAACAGCC‑TGTAAAAAATAAGACCGAGCGGagaac > 2:426092/1‑136 (MQ=255)
gTCTTAGCGCACAGCTTACAGCCTTCCAGACAGAGTCGTGGGTCATACAGCAGATCCTGCGTGCGGGCGCGGCTTTCC‑GGGTTCTGACACCAGCGGCAGCCCAGCGAACAGCC‑TTTAAGAAATACGACCGTGCGGA‑TAcc < 2:969606/140‑1 (MQ=255)
gTCTTAGCGCACAGCTTACAGCCTTCCAGACAGAGTCGTGGGGCATACAGCAGATCCTGCGTGCGGGCGCGGCTTTCC‑GGGTTCTGACACCAGCGGCAGCCCAGCGAACAGCC‑TTTAAGAAATACGACCGTGCGGA‑Ta < 8:577830/138‑1 (MQ=255)
gTCGTAGCGAACAGCTTACTGCCTTCCAGACAGAGTCGTGGGTCATACAGCAGATCCTGCGTGCGGGCGCGGCTTTCC‑GGGTTCTGACACCAGCGGCAGCCCAGCGAACAGCC‑TTTAAGAAATACGACCGTGCGGA‑Ta < 8:1077769/138‑1 (MQ=255)
ttgcgcAAAGCTTACAGCCTTCCAGACACAGTCGTGGGTCATACAGCAGATCCTGCGTGCGGGCGCGGCTTTCC‑GGGTTCTTACACCAGCGGCAGCCCAGCGAACAGCC‑TTTAAGAAATACGACCGTGCGGA‑TACCgggg < 6:561565/138‑1 (MQ=255)
tAGCGCACAGCTTACAGCCTTCCAGACAGAGTCGTGGGTCATACAGCAGATCCTGCGTGCGGGCGCGGCTTTCC‑GGGTTCTGACACCAGCGGCAGCCCAGCGAACAGCC‑TTTAAGAAATACGACCGTGCGGA‑TACCgggg < 2:1136108/140‑1 (MQ=255)
tAGCGCACAGCTTACAGCCTTCCAGACAGAGTCGTGGGTCATACAGCAGATCCTGCGTGCGGGCGCGGCTTTCC‑GGGTTCTGACACCAGCGGCAGCCCAGCGAACAGCC‑TTTAAGAAATACGACCGTGCGGA‑TACCgggg < 2:539257/140‑1 (MQ=255)
tAGCGCACAGCTTACAGCCTTCCAGACAGAGTCGTGGGTCATACAGCAGATCCTGCGTGCGGGCGCGGCTTTCC‑GGGTTCTGACACCAGCGGCAGCCCAGCGAACAGCC‑TTTAAGAAATACGACCGTGCGGA‑TACCgggg < 6:811050/140‑1 (MQ=255)
tAGCGCACAGCTTACAGCCTTCCAGACAGAGTCGTGGGTCATACAGCAGATCCTGCGGGCGGGCGCGGCTTTCC‑GGGTTCTGACACCAGCGGCAGCCCAGCGAACAGCC‑TTTAAGAAATACGACCGTGCGGA‑TACCgg < 8:479383/138‑1 (MQ=255)
aGCGCACAGCTTACAGCCTTCCAGACAGAGTCGTGGGTCATACAGCATGTACTGCGTGCGGGCGCGGGTTTCC‑GGGGTCTGACACCAGCGGCAGCCCCGCGAAACGCC‑TTTTAGAAATACGACCGTGCGGA‑TACCCGGGc > 4:912347/1‑140 (MQ=255)
cacaGCTTACAGCCTTCCAGTCAGAGTCGTGGGTCATACAGCAGATCCTGCGTGCGGGCGCGGCTTTCC‑GGGTTCTGAAACCAGCGGCTGCCCTGCGAACAGCC‑TTTAATAAATACGACCGTGCGGA‑TACCGGGGCca < 7:1070540/138‑1 (MQ=255)
caGCTTACAGCCTTCCAGACAGTGTCGTGGGTCATACAGCAGATCCTGCGTGCGGGCGCGGCTTTCC‑GGGTTCTGACACCAGCGGCAGCCCAGCGAACAGCC‑TTTAAGAAATACGACCGTGCGGA‑TACCGGGGCcatcat < 6:942157/140‑1 (MQ=255)
caGCTTACAGCCTTCCAGACAGAGTCGTGGGTCATACAGCAGATGCTGCGTGCGGGCGCCGCGTTCC‑GGGGTCTGACACCCGCGGCCGCCCCGCGAACAGCCGTTTAGTAAATA‑GAGCGTGCGGT‑TAACGGGGGcctcat > 4:45960/1‑140 (MQ=255)
caGCTTACAGCCTTCCAGACAGAGTCGTGGGTCATACAGCAGATCCTGCGTGCGGGCGCGGCGGTCC‑GGGTTCTGACACCAGCGGCAGCCCCGCGCACAGCC‑GTTAAGAAATAAGACCGGGCGGA‑TAACGGGGCcatcat > 2:65587/1‑140 (MQ=255)
caGCTTACAGCCTTCCAGACAGAGTCGTGGGTCATACAGCAGATACTGCGGGGGGGCGCGGGGTTCCGGGGTGTTGAC‑CCAGCGGCCGCCCAGCGAAAAGGC‑GTTAATAAAAACGACCGGGCGGA‑TACCGGGGcccacaa > 2:97173/1‑135 (MQ=255)
caGCTTACAGCCTTCCAGACAGAGTCGTGGGTCATAAAGCAGATCCTGCGTGCGGGCGCGGCGTTAC‑GGGTTCTGACACCAGCGGCCGCCCAGCGAACAGCC‑TTTAAGAAATAAGACCGTGCGGA‑TAACCGGGCcataat > 4:868028/1‑140 (MQ=255)
caGCTTACAGCCTTCCAGACAGAGTCGTGGGGCATACAGCAGATCCTGCGTGCGGGGGCGGCGTTGC‑GGGGTGTGCCCCCAGCGGCAGCCCCCCGCACCGCC‑GTTAAGAAATAAGGACGTGCGGG‑TACCGGGGGcctcat > 6:957088/1‑140 (MQ=255)
aaGCTTACCTCCTTCCAGAAAGAGTCGTGGGTGATACAGCAGATCCTGCGTGCGGGCGCGGCTTTCC‑GGGTTCTGACACCAGCGGCAGCCCAGCGAACAGCC‑TTTAAGAAATACGACCGTGCGGA‑TACCGGGGCcatc < 7:124237/137‑1 (MQ=255)
gCTTACAGCCTTCCAGACAGAGTCGTGGGTGGTTCAGCAGATCCTGCGTGCGGGCGCGGCTTTCC‑GGGGTCTGGCCCCCGCGGCAGCCCCGCGCACAGCC‑GTTAAGAAATACGACCCGGGGGC‑TTCCGGGGGCATCCTgg > 6:455626/1‑140 (MQ=255)
gCTTACAGCCTTCCAGACAGAGTCGTGGGTCATAAAGCAGATCAGTCGTGCGGGCTCGGCGTTCC‑AGGTTCTGACCCCAGCGGCCGCCCAGCGAAACTAC‑TTTAAGAAATAACACCCTGCGGT‑TACACGGGCcctcat > 8:1083479/1‑138 (MQ=255)
gCTTACAGCCTTCCAGACAGAGTCGTGGGTCAAACACCAGATCCTGCGGGCGGGCGCGGCTTTAC‑GGGTTATGACCCCACCGGCCGCCCACCGAACCCCC‑TTTAAGAAAAACGACCGGGCGGC‑TACCGGGGCcatcattg > 6:153659/1‑138 (MQ=255)
gCTTACAGCCTTCCAGACAGAGTCGTGGGGCATACAGCAGGTGCAGCGTGCGGGCGCGGGGTTAC‑GGGGTCTGGAACCCGCGGCAGCCCACCGGACAGCC‑TTTAAGAAAAACCACCGGGCGGG‑TACCGGGGCcatcaa > 8:107343/1‑137 (MQ=255)
gCTTACAGCCTTCCAGACAGAGTCGTGGGGCAAACAGCAGATGCTGCGTGCGGGCGCGGCTGTGC‑GGGTTCTGACCCCCGCGGCCGCCCCGCGCACAGCC‑AATAAGAAATAAGACCGTGCGGA‑TAACGGGGCcaaaaa > 8:755088/1‑134 (MQ=255)
gCTTACAGCCTTCCAGACAGAGTCGTGGGGAATACAGCAGATCCTGCGTGCGGGCGCGGGTTTGC‑GGGGTCTGACCCCAGCGGCCGCCCAGCGCACAGCC‑AGTAAGAAATACGCCCGTGCGGA‑TACCGGGGCcctcat > 8:755084/1‑138 (MQ=255)
tCCAGACAGAGTCGTGGGTCATAGAGCCTATCCGGCGGGCGGGCGCGGCTTTCC‑GGGTTCGGTACCCAGCGGCCGCCCACCGCACACCC‑TTTTAGAAATACGACCCTGCGGA‑TACCCGGGCCCTGATGGTGCGTGTAGCg > 2:52255/1‑140 (MQ=255)
tCCAGACAGAGTCGTGGGTCATACAGCAGATCCTGCGTGCGGGCGCGGCTTTCC‑GGGGTCTGCCACCAGCGGCAGCCCAGCGAACAGCC‑TTTAAGAAATACGACCGTGCGGA‑TAACGGGGCCCTCATGGGTCGAGTAGCg > 2:1125099/1‑140 (MQ=255)
tCCAGACAGAGTCGTGGGGGATACAGCAGCTACTGCGTGCGGGCGCGGGTTTGC‑GGGGTCTGACACCCGCGGCCCCCCCGCGCACACCC‑GTTAAGAAAAACCCCCGGGGCGC‑TACCGGGGCCATCCTGGGTCGAGTAGCg > 2:58897/1‑140 (MQ=255)
tCCAGACAGAGTCGTGGGGGATACACCACATACGGCGTGGGGGCGCCGCTTTGC‑GGGGTGTGAACCCCGCGGCAGCCCAGCGCAACGCC‑AGTTAAAAATACGACCCGGCCGATTACGGGGGCCA‑CAAGGGGCGAggtgcg > 6:231365/1‑135 (MQ=255)
tCCAGACAGAGTCGTGGGGCATAAAGCAGATGCAGCGTGCGGGCGCGGCGTTCC‑GGGTTCTGACCCCAGCGGCAGGCCAACGCTCCCCC‑TTTAAGAAATAAGCCCCGGCGGC‑TACCCGGGCCAACCTGGGGCGAGTAGCg > 4:229187/1‑140 (MQ=255)
cagacagaGTCGTGGGTCAAACAGCAGATACTGCGGGCGGGCGCGGCTTTCC‑GGGTGCAGACACCCCCGGCCGCCCAGCGAACAGCC‑GTTTATAAATACGACCGTGCGGA‑TACCGGGGGCCACATGGGTCGAGTAgag > 8:1076025/1‑136 (MQ=255)
acagtGTCGTGGGTCATACAGCAGATCCTGCGTGCGGGCGCGGCTTTCC‑GGGTTCTGACACCAGCGGCAGCCCAGCGAACAGCC‑TTTAAGAAATACGACCGTGCGGA‑TACCGGGGCCATCATGGGTCGAGTAGCGTTGaa < 1:426092/140‑1 (MQ=255)
agagTCGTGGGTCATACAGCAGATCCTGCGTGCGGGCGCGGCTTTCC‑GGGTTCTGACACCAGCGGCAGCCCAGCGAACAGCC‑TTTAAGAAATACGACCGTGCGGA‑TACCGGGGCCATCATGGGTCGAGTAGCGTTGAata < 6:911351/140‑1 (MQ=255)
cgTCGTGGGTCATACAGCAGATCCTGCGTGCGGGCGCGGCTTTCC‑GGGTTCTGACACCAGCGGCAGCCCAGCGAACAGCC‑TTTAAGAAATACGACCGTGCGGA‑TACCGGGGCCATCATGGGTCGAGTAGCGTTGAATAtt < 3:496458/139‑1 (MQ=255)
agTCGTGGGTCATACAGCAGATCCTGCGTGCGGGCGCGGCTTTCC‑GGGGTAGTACACCCGCGGCAGCCCCGCGAACAGCC‑TTTAAGAAATACGACCGGGCGGA‑TACCGGGGCCATAATTGGGGGAGTATCGGTGAATAtt > 4:27715/1‑140 (MQ=255)
tCATACAGCAGATCCTGCGTGCGGGCGCGGCTTTCC‑GGGTTCTGACACCAGCGGCAGCCCAGCGAACAGCC‑TTTAAGAAATACGACCGTGCGGA‑TACCGGGGCCATCATGGGTCGAGTAGCGTTGAATATTGAAAATCAt < 4:207491/140‑1 (MQ=255)
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GGCAGCAGTCGGTTAGCGCCGTAAAATGCTCCGGGGTTAACTTTTCCCGATGAATAAGCAAACCATTCAACGCGCGCTCAATCACTTCCGGTGCGGTCTTAGCGCACAGCTTACAGCCTTCCAGACAGAGTCGTGGGTCATACAGCAGATCCTGCGTGCGGGCGCGGCTTTCC‑GGGTTCTGACACCAGCGGCAGCCCAGCGAACAGCC‑TTTAAGAAATACGACCGTGCGGA‑TACCGGGGCCATCATGGGTCGAGTAGCGTTGAATATTGAAAATCAT > NZ_CP022686/4368204‑4368480
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| Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
N/A
